Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:40:14 (2098393): wrapper (7.7.26015): starting
09:40:14 (2098393): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 09:40:14] Arguments: --nthreads 10
[2025-06-04 09:40:14] Threads: 10
[2025-06-04 09:40:14] Checking for CVMFS
[2025-06-04 09:40:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:40:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:40:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:40:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:40:16] 2.12.6.0 5977 1376 161684 146781 1 349 24174191 32935937 36762 16776704 0 10262272 99.673 7885707 24219 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:40:16] CVMFS is ok
[2025-06-04 09:40:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:40:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:40:16] Further information can be found at the LHC@home message board.
[2025-06-04 09:40:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:40:16] Checking for apptainer binary...
[2025-06-04 09:40:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:40:16] Running /usr/bin/apptainer --version
[2025-06-04 09:40:16] apptainer version 1.4.1-1.el9
[2025-06-04 09:40:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:40:16] c-1-3.aglt2.org
[2025-06-04 09:40:16] apptainer works
[2025-06-04 09:40:16] Set ATHENA_PROC_NUMBER=10
[2025-06-04 09:40:16] Set ATHENA_CORE_NUMBER=10
[2025-06-04 09:40:16] Starting ATLAS job with PandaID=6678364516
[2025-06-04 09:40:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:20:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:20:29] 2025-06-04 16:20:06,880 | INFO     | intersect: -83436360428.26134
[2025-06-04 12:20:29] 2025-06-04 16:20:06,880 | INFO     | chi2: 5.9317718378700715
[2025-06-04 12:20:29] 2025-06-04 16:20:06,880 | INFO     | sum of square deviations: 1025679533.1946278
[2025-06-04 12:20:29] 2025-06-04 16:20:06,881 | INFO     | sum of deviations: 62042485710.711395
[2025-06-04 12:20:29] 2025-06-04 16:20:06,881 | INFO     | mean x: 1749049110.3825502
[2025-06-04 12:20:29] 2025-06-04 16:20:06,881 | INFO     | mean y: 2137267.812080537
[2025-06-04 12:20:29] 2025-06-04 16:20:06,882 | INFO     | -- intersect: -105796361119.15974
[2025-06-04 12:20:29] 2025-06-04 16:20:06,886 | INFO     | intersect: -105796361119.15974
[2025-06-04 12:20:29] 2025-06-04 16:20:06,886 | INFO     | chi2: 5.203982540668036
[2025-06-04 12:20:29] 2025-06-04 16:20:06,886 | INFO     | current chi2=5.203982540668036 (change=12.269340714617979 %)
[2025-06-04 12:20:29] 2025-06-04 16:20:06,886 | INFO     | right removable region: 148
[2025-06-04 12:20:29] 2025-06-04 16:20:06,887 | INFO     | sum of square deviations: 1025662331.6375848
[2025-06-04 12:20:29] 2025-06-04 16:20:06,887 | INFO     | sum of deviations: 17612334566.818798
[2025-06-04 12:20:29] 2025-06-04 16:20:06,888 | INFO     | mean x: 1749049415.3959732
[2025-06-04 12:20:29] 2025-06-04 16:20:06,888 | INFO     | mean y: 2177981.697986577
[2025-06-04 12:20:29] 2025-06-04 16:20:06,888 | INFO     | -- intersect: -30031920500.469463
[2025-06-04 12:20:29] 2025-06-04 16:20:06,888 | INFO     | intersect: -30031920500.469463
[2025-06-04 12:20:29] 2025-06-04 16:20:06,888 | INFO     | chi2: 2.82970389014801
[2025-06-04 12:20:29] 2025-06-04 16:20:06,888 | INFO     | current chi2=2.82970389014801 (change=52.295806927663705 %)
[2025-06-04 12:20:29] 2025-06-04 16:20:06,888 | INFO     | sum of square deviations: 925809905.8263888
[2025-06-04 12:20:29] 2025-06-04 16:20:06,889 | INFO     | sum of deviations: -7365781696.965276
[2025-06-04 12:20:29] 2025-06-04 16:20:06,889 | INFO     | mean x: 1749049567.9097223
[2025-06-04 12:20:29] 2025-06-04 16:20:06,889 | INFO     | mean y: 2216125.6180555555
[2025-06-04 12:20:29] 2025-06-04 16:20:06,889 | INFO     | -- intersect: 13917726440.767292
[2025-06-04 12:20:29] 2025-06-04 16:20:06,890 | INFO     | intersect: 13917726440.767292
[2025-06-04 12:20:29] 2025-06-04 16:20:06,890 | INFO     | chi2: 1.4412593714827797
[2025-06-04 12:20:29] 2025-06-04 16:20:06,890 | INFO     | current chi2=1.4412593714827797 (change=49.06677774657921 %)
[2025-06-04 12:20:29] 2025-06-04 16:20:06,890 | INFO     | sum of square deviations: 832672847.625901
[2025-06-04 12:20:29] 2025-06-04 16:20:06,891 | INFO     | sum of deviations: -21427599720.769787
[2025-06-04 12:20:29] 2025-06-04 16:20:06,891 | INFO     | mean x: 1749049720.4100718
[2025-06-04 12:20:29] 2025-06-04 16:20:06,891 | INFO     | mean y: 2239067.978417266
[2025-06-04 12:20:29] 2025-06-04 16:20:06,891 | INFO     | -- intersect: 45011437347.38386
[2025-06-04 12:20:29] 2025-06-04 16:20:06,891 | INFO     | intersect: 45011437347.38386
[2025-06-04 12:20:29] 2025-06-04 16:20:06,891 | INFO     | chi2: 0.9171919657801101
[2025-06-04 12:20:29] 2025-06-04 16:20:06,892 | INFO     | current chi2=0.9171919657801101 (change=36.3617691632773 %)
[2025-06-04 12:20:29] 2025-06-04 16:20:06,892 | INFO     | sum of square deviations: 746017862.5373125
[2025-06-04 12:20:29] 2025-06-04 16:20:06,892 | INFO     | sum of deviations: -22598091311.32836
[2025-06-04 12:20:29] 2025-06-04 16:20:06,892 | INFO     | mean x: 1749049872.8955224
[2025-06-04 12:20:29] 2025-06-04 16:20:06,893 | INFO     | mean y: 2240995.119402985
[2025-06-04 12:20:29] 2025-06-04 16:20:06,893 | INFO     | -- intersect: 52983799105.979515
[2025-06-04 12:20:29] 2025-06-04 16:20:06,893 | INFO     | intersect: 52983799105.979515
[2025-06-04 12:20:29] 2025-06-04 16:20:06,893 | INFO     | chi2: 0.8642792499367629
[2025-06-04 12:20:29] 2025-06-04 16:20:06,893 | INFO     | current chi2=0.8642792499367629 (change=5.76899033326603 %)
[2025-06-04 12:20:29] 2025-06-04 16:20:06,893 | INFO     | left removable region: 40
[2025-06-04 12:20:29] 2025-06-04 16:20:06,893 | INFO     | sum of square deviations: 390564664.18518513
[2025-06-04 12:20:29] 2025-06-04 16:20:06,894 | INFO     | sum of deviations: -3217863050.537037
[2025-06-04 12:20:29] 2025-06-04 16:20:06,894 | INFO     | mean x: 1749050299.8703704
[2025-06-04 12:20:29] 2025-06-04 16:20:06,894 | INFO     | mean y: 2234819.175925926
[2025-06-04 12:20:29] 2025-06-04 16:20:06,894 | INFO     | -- intersect: 14412663743.219584
[2025-06-04 12:20:29] 2025-06-04 16:20:06,894 | INFO     | intersect: 14412663743.219584
[2025-06-04 12:20:29] 2025-06-04 16:20:06,894 | INFO     | chi2: 0.06431181272223464
[2025-06-04 12:20:29] 2025-06-04 16:20:06,895 | INFO     | -- intersect: 14412663743.219584
[2025-06-04 12:20:29] 2025-06-04 16:20:06,895 | INFO     | current memory leak: -8.24 B/s (using 108 data points, chi2=0.06)
[2025-06-04 12:20:29] 2025-06-04 16:20:06,895 | INFO     | ..............................
[2025-06-04 12:20:29] 2025-06-04 16:20:06,895 | INFO     | . Timing measurements:
[2025-06-04 12:20:29] 2025-06-04 16:20:06,895 | INFO     | . get job = 0 s
[2025-06-04 12:20:29] 2025-06-04 16:20:06,896 | INFO     | . initial setup = 6 s
[2025-06-04 12:20:29] 2025-06-04 16:20:06,896 | INFO     | . payload setup = 34 s
[2025-06-04 12:20:29] 2025-06-04 16:20:06,896 | INFO     | . stage-in = 0 s
[2025-06-04 12:20:29] 2025-06-04 16:20:06,896 | INFO     | . payload execution = 9394 s
[2025-06-04 12:20:29] 2025-06-04 16:20:06,896 | INFO     | . stage-out = 2 s
[2025-06-04 12:20:29] 2025-06-04 16:20:06,896 | INFO     | . log creation = 0 s
[2025-06-04 12:20:29] 2025-06-04 16:20:06,896 | INFO     | ..............................
[2025-06-04 12:20:29] 2025-06-04 16:20:06,993 | INFO     | 
[2025-06-04 12:20:29] 2025-06-04 16:20:06,994 | INFO     | job summary report
[2025-06-04 12:20:29] 2025-06-04 16:20:06,994 | INFO     | --------------------------------------------------
[2025-06-04 12:20:29] 2025-06-04 16:20:06,994 | INFO     | PanDA job id: 6678364516
[2025-06-04 12:20:29] 2025-06-04 16:20:06,994 | INFO     | task id: 45006595
[2025-06-04 12:20:29] 2025-06-04 16:20:06,994 | INFO     | errors: (none)
[2025-06-04 12:20:29] 2025-06-04 16:20:06,994 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:20:29] 2025-06-04 16:20:06,994 | INFO     | pilot state: finished 
[2025-06-04 12:20:29] 2025-06-04 16:20:06,994 | INFO     | transexitcode: 0
[2025-06-04 12:20:29] 2025-06-04 16:20:06,994 | INFO     | exeerrorcode: 0
[2025-06-04 12:20:29] 2025-06-04 16:20:06,994 | INFO     | exeerrordiag: 
[2025-06-04 12:20:29] 2025-06-04 16:20:06,994 | INFO     | exitcode: 0
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | exitmsg: OK
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | cpuconsumptiontime: 38747 s
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | nevents: 400
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | neventsw: 0
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | pid: 2144590
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | pgrp: 2144590
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | corecount: 10
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | event service: False
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | sizes: {0: 2397171, 1: 2397171, 2: 2397398, 13: 2397398, 25: 2397454, 29: 2397688, 35: 2397844, 9434: 2425836, 9439: 2434833, 9470: 2434947}
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | --------------------------------------------------
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | 
[2025-06-04 12:20:29] 2025-06-04 16:20:06,995 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 12:20:29] 2025-06-04 16:20:07,051 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,053 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:20:29] 2025-06-04 16:20:07,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,053 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:20:29] 2025-06-04 16:20:07,053 | INFO     | job 6678364516 has completed (purged errors)
[2025-06-04 12:20:29] 2025-06-04 16:20:07,053 | INFO     | overall cleanup function is called
[2025-06-04 12:20:29] 2025-06-04 16:20:08,073 | INFO     | --- collectZombieJob: --- 10, [2144590]
[2025-06-04 12:20:29] 2025-06-04 16:20:08,073 | INFO     | zombie collector waiting for pid 2144590
[2025-06-04 12:20:29] 2025-06-04 16:20:08,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:20:29] 2025-06-04 16:20:08,073 | INFO     | collected zombie processes
[2025-06-04 12:20:29] 2025-06-04 16:20:08,073 | INFO     | will attempt to kill all subprocesses of pid=2144590
[2025-06-04 12:20:29] 2025-06-04 16:20:10,327 | INFO     | PID=2115459 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 12:20:29] 2025-06-04 16:20:10,328 | INFO     | .. there are 50 such processes running
[2025-06-04 12:20:29] 2025-06-04 16:20:10,507 | INFO     | process IDs to be killed: [2144590] (in reverse order)
[2025-06-04 12:20:29] 2025-06-04 16:20:10,721 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:20:29] 2025-06-04 16:20:10,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:20:29] 2025-06-04 16:20:10,752 | INFO     | did not find any defunct processes belonging to 2144590
[2025-06-04 12:20:29] 2025-06-04 16:20:10,921 | INFO     | did not find any defunct processes belonging to 2144590
[2025-06-04 12:20:29] 2025-06-04 16:20:10,922 | INFO     | ready for new job
[2025-06-04 12:20:29] 2025-06-04 16:20:10,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:20:29] 2025-06-04 16:20:10,925 | INFO     | **************************************
[2025-06-04 12:20:29] 2025-06-04 16:20:10,925 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:20:29] 2025-06-04 16:20:10,925 | INFO     | **************************************
[2025-06-04 12:20:29] 2025-06-04 16:20:10,925 | INFO     | 
[2025-06-04 12:20:29] 2025-06-04 16:20:10,955 | INFO     | architecture information:
[2025-06-04 12:20:29] 2025-06-04 16:20:10,963 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:20:29] 2025-06-04 16:20:11,012 | INFO     | cat /etc/os-release:
[2025-06-04 12:20:29] NAME="CentOS Linux"
[2025-06-04 12:20:29] VERSION="7 (Core)"
[2025-06-04 12:20:29] ID="centos"
[2025-06-04 12:20:29] ID_LIKE="rhel fedora"
[2025-06-04 12:20:29] VERSION_ID="7"
[2025-06-04 12:20:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:20:29] ANSI_COLOR="0;31"
[2025-06-04 12:20:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:20:29] HOME_URL="https://www.centos.org/"
[2025-06-04 12:20:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:20:29] 
[2025-06-04 12:20:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:20:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:20:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:20:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:20:29] 
[2025-06-04 12:20:29] 2025-06-04 16:20:11,012 | INFO     | **************************************
[2025-06-04 12:20:29] 2025-06-04 16:20:11,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 12:20:29] 2025-06-04 16:20:11,640 | INFO     | sufficient remaining disk space (75947311104 B)
[2025-06-04 12:20:29] 2025-06-04 16:20:11,641 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:20:29] 2025-06-04 16:20:11,641 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:20:29] 2025-06-04 16:20:11,641 | INFO     | update_server=False
[2025-06-04 12:20:29] 2025-06-04 16:20:11,641 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:20:29] 2025-06-04 16:20:11,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:20:29] 2025-06-04 16:20:11,665 | INFO     | all job control threads have been joined
[2025-06-04 12:20:29] 2025-06-04 16:20:11,730 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 12:20:29] 2025-06-04 16:20:11,730 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 12:20:29] 2025-06-04 16:20:11,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:20:29] 2025-06-04 16:20:11,730 | INFO     | will abort loop
[2025-06-04 12:20:29] 2025-06-04 16:20:12,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:20:29] 2025-06-04 16:20:12,264 | INFO     | all data control threads have been joined
[2025-06-04 12:20:29] 2025-06-04 16:20:12,335 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:20:29] 2025-06-04 16:20:12,335 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:20:29] 2025-06-04 16:20:12,335 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:20:29] 2025-06-04 16:20:12,572 | INFO     | all payload control threads have been joined
[2025-06-04 12:20:29] 2025-06-04 16:20:12,647 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:12,671 | INFO     | [job] control thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:12,736 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:12,740 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:12,744 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:12,813 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:12,813 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:12,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:20:29] 2025-06-04 16:20:13,100 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:13,270 | INFO     | [data] control thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:13,578 | INFO     | [payload] control thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:13,649 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:13,809 | INFO     | [job] validate thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:13,809 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:14,042 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:16,976 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:21,832 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:20:29] 2025-06-04 16:20:22,837 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:20:29] 2025-06-04 16:20:23,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245971515200)>', '<ExcThread(monitor, started 140245026723584)>']
[2025-06-04 12:20:29] 2025-06-04 16:20:23,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:20:29] 2025-06-04 16:20:23,414 | INFO     | [monitor] control thread has ended
[2025-06-04 12:20:29] 2025-06-04 16:20:28,082 | INFO     | all workflow threads have been joined
[2025-06-04 12:20:29] 2025-06-04 16:20:28,082 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:20:29] 2025-06-04 16:20:28,082 | INFO     | traces error code: 0
[2025-06-04 12:20:29] 2025-06-04 16:20:28,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:20:29] 2025-06-04 16:20:28,536 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:20:29] 2025-06-04 16:20:28,567 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:20:29] 2025-06-04 16:20:28,589 [wrapper] pilotpid: 2115459
[2025-06-04 12:20:29] 2025-06-04 16:20:28,622 [wrapper] Pilot exit status: 0
[2025-06-04 12:20:29] 2025-06-04 16:20:28,697 [wrapper] pandaids: 6678364516
[2025-06-04 12:20:29] 2025-06-04 16:20:28,826 [wrapper] cleanup supervisor_pilot 3415390 2115460
[2025-06-04 12:20:29] 2025-06-04 16:20:28,847 [wrapper] Test setup, not cleaning
[2025-06-04 12:20:29] 2025-06-04 16:20:28,859 [wrapper] apfmon messages muted
[2025-06-04 12:20:29] 2025-06-04 16:20:28,888 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:20:29] 2025-06-04 16:20:28,918 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:20:29]  *** Error codes and diagnostics ***
[2025-06-04 12:20:29]     "exeErrorCode": 0,
[2025-06-04 12:20:29]     "exeErrorDiag": "",
[2025-06-04 12:20:29]     "pilotErrorCode": 0,
[2025-06-04 12:20:29]     "pilotErrorDiag": "",
[2025-06-04 12:20:29]  *** Listing of results directory ***
[2025-06-04 12:20:29] total 388452
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:26 queuedata.json
[2025-06-04 12:20:29] -rwx------. 1 boincer umatlas     37140 Jun  4 02:26 runpilot2-wrapper.sh
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:20:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:40 run_atlas
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:40 job.xml
[2025-06-04 12:20:29] -rw-r--r--. 2 boincer umatlas 214470889 Jun  4 09:40 EVNT.45006593._002162.pool.root.1
[2025-06-04 12:20:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:40 start_atlas.sh
[2025-06-04 12:20:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:40 shared
[2025-06-04 12:20:29] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 09:40 input.tar.gz
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:40 boinc_lockfile
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 09:40 pandaJob.out
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas    986819 Jun  4 09:41 agis_schedconf.cvmfs.json
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:20:29] drwx------. 4 boincer umatlas      4096 Jun  4 09:41 pilot3
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas      6837 Jun  4 12:18 init_data.xml
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas 177215870 Jun  4 12:18 HITS.45006595._054016.pool.root.1
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:18 boinc_task_state.xml
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas      1041 Jun  4 12:19 memory_monitor_summary.json
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas    370472 Jun  4 12:19 log.45006595._054016.job.log.tgz.1
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas        95 Jun  4 12:19 pilot_heartbeat.json
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas      7715 Jun  4 12:20 heartbeat.json
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:20 wrapper_checkpoint.txt
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:20 boinc_mmap_file
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas      4611 Jun  4 12:20 pilotlog.txt
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas    757008 Jun  4 12:20 log.45006595._054016.job.log.1
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas       357 Jun  4 12:20 output.list
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:20 runtime_log
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas   1146880 Jun  4 12:20 result.tar.gz
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas      8646 Jun  4 12:20 runtime_log.err
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas       649 Jun  4 12:20 PvLODm2kwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmWqaKDmnf563n.diag
[2025-06-04 12:20:29] -rw-r--r--. 1 boincer umatlas     21007 Jun  4 12:20 stderr.txt
[2025-06-04 12:20:29] HITS file was successfully produced:
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas 177215870 Jun  4 12:18 shared/HITS.pool.root.1
[2025-06-04 12:20:29]  *** Contents of shared directory: ***
[2025-06-04 12:20:29] total 384156
[2025-06-04 12:20:29] -rw-r--r--. 2 boincer umatlas 214470889 Jun  4 09:40 ATLAS.root_0
[2025-06-04 12:20:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:40 start_atlas.sh
[2025-06-04 12:20:29] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 09:40 input.tar.gz
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas 177215870 Jun  4 12:18 HITS.pool.root.1
[2025-06-04 12:20:29] -rw-------. 1 boincer umatlas   1146880 Jun  4 12:20 result.tar.gz
12:20:31 (2098393): run_atlas exited; CPU time 39194.914635
12:20:31 (2098393): called boinc_finish(0)

</stderr_txt>
]]>

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