Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:32:14 (3057317): wrapper (7.7.26015): starting
09:32:14 (3057317): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:32:14] Arguments: --nthreads 8
[2025-06-04 09:32:14] Threads: 8
[2025-06-04 09:32:14] Checking for CVMFS
[2025-06-04 09:32:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:32:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:32:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:32:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:32:14] 2.12.6.0 15283 31405 281256 146781 2 691 29802234 32503809 40200 16776704 0 401020301 99.701 299219268 36321 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:32:14] CVMFS is ok
[2025-06-04 09:32:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:32:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:32:14] Further information can be found at the LHC@home message board.
[2025-06-04 09:32:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:32:14] Checking for apptainer binary...
[2025-06-04 09:32:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:32:14] Running /usr/bin/apptainer --version
[2025-06-04 09:32:15] apptainer version 1.4.1-1.el9
[2025-06-04 09:32:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:32:15] c8-7-1.aglt2.org
[2025-06-04 09:32:15] apptainer works
[2025-06-04 09:32:15] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:32:15] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:32:15] Starting ATLAS job with PandaID=6679585579
[2025-06-04 09:32:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:22:08]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:22:08]  protocol_id=None
[2025-06-04 10:22:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:22:08]  replicas=None
[2025-06-04 10:22:08]  scope=mc23_13p6TeV
[2025-06-04 10:22:08]  status=None
[2025-06-04 10:22:08]  status_code=0
[2025-06-04 10:22:08]  storage_token=
[2025-06-04 10:22:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679585579/log.45006595._056496.job.log.tgz.1
[2025-06-04 10:22:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/f6/log.45006595._056496.job.log.tgz.1
[2025-06-04 10:22:08]  workdir=None
[2025-06-04 10:22:08] ]
[2025-06-04 10:22:08] 2025-06-04 14:21:44,560 | INFO     | transferring file log.45006595._056496.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679585579/log.45006595._056496.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:22:08] 2025-06-04 14:21:44,560 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679585579/log.45006595._056496.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056496.job
[2025-06-04 10:22:08] 2025-06-04 14:21:44,578 | INFO     | adding to output.list: log.45006595._056496.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/f6/log.45006595._056496.job.log.tg
[2025-06-04 10:22:08] 2025-06-04 14:21:44,579 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:22:08] 2025-06-04 14:21:44,579 | INFO     | summary of transferred files:
[2025-06-04 10:22:08] 2025-06-04 14:21:44,579 | INFO     |  -- lfn=log.45006595._056496.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:22:08] 2025-06-04 14:21:44,579 | INFO     | stage-out finished correctly
[2025-06-04 10:22:08] 2025-06-04 14:21:44,749 | WARNING  | process 3084629 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:22:08] 2025-06-04 14:21:44,749 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679585579/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:22:08] 2025-06-04 14:21:45,220 | INFO     | number of running child processes to parent process 3084629: 1
[2025-06-04 10:22:08] 2025-06-04 14:21:45,220 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:22:08] 2025-06-04 14:21:45,792 | INFO     | PID=3064772 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 10:22:08] 2025-06-04 14:21:45,792 | INFO     | .. there are 64 such processes running
[2025-06-04 10:22:08] 2025-06-04 14:21:47,291 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:22:08] 2025-06-04 14:21:47,723 | INFO     | monitor loop #216: job 0:6679585579 is in state 'finished'
[2025-06-04 10:22:08] 2025-06-04 14:21:47,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:22:08] 2025-06-04 14:21:49,275 | INFO     | job 6679585579 has state=finished
[2025-06-04 10:22:08] 2025-06-04 14:21:49,275 | INFO     | preparing for final server update for job 6679585579 in state='finished'
[2025-06-04 10:22:08] 2025-06-04 14:21:49,276 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:22:08] 2025-06-04 14:21:49,276 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:22:08] 2025-06-04 14:21:49,276 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:22:08] 2025-06-04 14:21:49,276 | INFO     | job 6679585579 has finished - writing final server update
[2025-06-04 10:22:08] 2025-06-04 14:21:49,276 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:22:08] 2025-06-04 14:21:49,281 | INFO     | executing command: lscpu
[2025-06-04 10:22:08] 2025-06-04 14:21:49,339 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:22:08] 2025-06-04 14:21:50,226 | INFO     | monitor loop #217: job 0:6679585579 is in state 'finished'
[2025-06-04 10:22:08] 2025-06-04 14:21:50,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:22:08] 2025-06-04 14:21:52,729 | INFO     | monitor loop #218: job 0:6679585579 is in state 'finished'
[2025-06-04 10:22:08] 2025-06-04 14:21:52,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:22:08] 2025-06-04 14:21:53,585 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:22:08] 2025-06-04 14:21:53,586 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679585579/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:22:08] 2025-06-04 14:21:53,586 | INFO     | extracted standard info from prmon json
[2025-06-04 10:22:08] 2025-06-04 14:21:53,586 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:22:08] 2025-06-04 14:21:53,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:22:08] 2025-06-04 14:21:53,587 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:22:08] 2025-06-04 14:21:53,587 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:22:08] 2025-06-04 14:21:53,587 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:22:08] 2025-06-04 14:21:53,588 | INFO     | sum of square deviations: 22960430.5
[2025-06-04 10:22:08] 2025-06-04 14:21:53,588 | INFO     | sum of deviations: 5296621734.5
[2025-06-04 10:22:08] 2025-06-04 14:21:53,588 | INFO     | mean x: 1749045526.5
[2025-06-04 10:22:08] 2025-06-04 14:21:53,588 | INFO     | mean y: 2143251.5
[2025-06-04 10:22:08] 2025-06-04 14:21:53,588 | INFO     | -- intersect: -403476029785.7998
[2025-06-04 10:22:08] 2025-06-04 14:21:53,588 | INFO     | intersect: -403476029785.7998
[2025-06-04 10:22:08] 2025-06-04 14:21:53,588 | INFO     | chi2: 0.7267082331081929
[2025-06-04 10:22:08] 2025-06-04 14:21:53,588 | INFO     | -- intersect: -403476029785.7998
[2025-06-04 10:22:08] 2025-06-04 14:21:53,588 | INFO     | current memory leak: 230.68 B/s (using 42 data points, chi2=0.73)
[2025-06-04 10:22:08] 2025-06-04 14:21:53,588 | INFO     | ..............................
[2025-06-04 10:22:08] 2025-06-04 14:21:53,588 | INFO     | . Timing measurements:
[2025-06-04 10:22:08] 2025-06-04 14:21:53,589 | INFO     | . get job = 0 s
[2025-06-04 10:22:08] 2025-06-04 14:21:53,589 | INFO     | . initial setup = 2 s
[2025-06-04 10:22:08] 2025-06-04 14:21:53,589 | INFO     | . payload setup = 5 s
[2025-06-04 10:22:08] 2025-06-04 14:21:53,589 | INFO     | . stage-in = 0 s
[2025-06-04 10:22:08] 2025-06-04 14:21:53,589 | INFO     | . payload execution = 2933 s
[2025-06-04 10:22:08] 2025-06-04 14:21:53,589 | INFO     | . stage-out = 0 s
[2025-06-04 10:22:08] 2025-06-04 14:21:53,589 | INFO     | . log creation = 0 s
[2025-06-04 10:22:08] 2025-06-04 14:21:53,589 | INFO     | ..............................
[2025-06-04 10:22:08] 2025-06-04 14:21:53,642 | INFO     | 
[2025-06-04 10:22:08] 2025-06-04 14:21:53,642 | INFO     | job summary report
[2025-06-04 10:22:08] 2025-06-04 14:21:53,642 | INFO     | --------------------------------------------------
[2025-06-04 10:22:08] 2025-06-04 14:21:53,642 | INFO     | PanDA job id: 6679585579
[2025-06-04 10:22:08] 2025-06-04 14:21:53,642 | INFO     | task id: 45006595
[2025-06-04 10:22:08] 2025-06-04 14:21:53,642 | INFO     | errors: (none)
[2025-06-04 10:22:08] 2025-06-04 14:21:53,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:22:08] 2025-06-04 14:21:53,643 | INFO     | pilot state: finished 
[2025-06-04 10:22:08] 2025-06-04 14:21:53,643 | INFO     | transexitcode: 0
[2025-06-04 10:22:08] 2025-06-04 14:21:53,643 | INFO     | exeerrorcode: 0
[2025-06-04 10:22:08] 2025-06-04 14:21:53,643 | INFO     | exeerrordiag: 
[2025-06-04 10:22:08] 2025-06-04 14:21:53,643 | INFO     | exitcode: 0
[2025-06-04 10:22:08] 2025-06-04 14:21:53,643 | INFO     | exitmsg: OK
[2025-06-04 10:22:08] 2025-06-04 14:21:53,643 | INFO     | cpuconsumptiontime: 18565 s
[2025-06-04 10:22:08] 2025-06-04 14:21:53,643 | INFO     | nevents: 400
[2025-06-04 10:22:08] 2025-06-04 14:21:53,643 | INFO     | neventsw: 0
[2025-06-04 10:22:08] 2025-06-04 14:21:53,643 | INFO     | pid: 3084629
[2025-06-04 10:22:08] 2025-06-04 14:21:53,644 | INFO     | pgrp: 3084629
[2025-06-04 10:22:08] 2025-06-04 14:21:53,644 | INFO     | corecount: 8
[2025-06-04 10:22:08] 2025-06-04 14:21:53,644 | INFO     | event service: False
[2025-06-04 10:22:08] 2025-06-04 14:21:53,644 | INFO     | sizes: {0: 2397241, 4: 2397447, 10: 2397475, 2943: 2422807, 2944: 2431748, 2946: 2431804, 2953: 2432102}
[2025-06-04 10:22:08] 2025-06-04 14:21:53,644 | INFO     | --------------------------------------------------
[2025-06-04 10:22:08] 2025-06-04 14:21:53,645 | INFO     | 
[2025-06-04 10:22:08] 2025-06-04 14:21:53,645 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,668 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,669 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:22:08] 2025-06-04 14:21:53,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,669 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:22:08] 2025-06-04 14:21:53,669 | INFO     | job 6679585579 has completed (purged errors)
[2025-06-04 10:22:08] 2025-06-04 14:21:53,669 | INFO     | overall cleanup function is called
[2025-06-04 10:22:08] 2025-06-04 14:21:54,676 | INFO     | --- collectZombieJob: --- 10, [3084629]
[2025-06-04 10:22:08] 2025-06-04 14:21:54,676 | INFO     | zombie collector waiting for pid 3084629
[2025-06-04 10:22:08] 2025-06-04 14:21:54,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:22:08] 2025-06-04 14:21:54,676 | INFO     | collected zombie processes
[2025-06-04 10:22:08] 2025-06-04 14:21:54,676 | INFO     | will attempt to kill all subprocesses of pid=3084629
[2025-06-04 10:22:08] 2025-06-04 14:21:55,147 | INFO     | process IDs to be killed: [3084629] (in reverse order)
[2025-06-04 10:22:08] 2025-06-04 14:21:55,335 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:22:08] 2025-06-04 14:21:55,335 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:22:08] 2025-06-04 14:21:55,365 | INFO     | did not find any defunct processes belonging to 3084629
[2025-06-04 10:22:08] 2025-06-04 14:21:55,395 | INFO     | did not find any defunct processes belonging to 3084629
[2025-06-04 10:22:08] 2025-06-04 14:21:55,396 | INFO     | ready for new job
[2025-06-04 10:22:08] 2025-06-04 14:21:55,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:22:08] 2025-06-04 14:21:55,398 | INFO     | **************************************
[2025-06-04 10:22:08] 2025-06-04 14:21:55,398 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:22:08] 2025-06-04 14:21:55,398 | INFO     | **************************************
[2025-06-04 10:22:08] 2025-06-04 14:21:55,398 | INFO     | 
[2025-06-04 10:22:08] 2025-06-04 14:21:55,415 | INFO     | architecture information:
[2025-06-04 10:22:08] 2025-06-04 14:21:55,416 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:22:08] 2025-06-04 14:21:55,431 | INFO     | cat /etc/os-release:
[2025-06-04 10:22:08] NAME="CentOS Linux"
[2025-06-04 10:22:08] VERSION="7 (Core)"
[2025-06-04 10:22:08] ID="centos"
[2025-06-04 10:22:08] ID_LIKE="rhel fedora"
[2025-06-04 10:22:08] VERSION_ID="7"
[2025-06-04 10:22:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:22:08] ANSI_COLOR="0;31"
[2025-06-04 10:22:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:22:08] HOME_URL="https://www.centos.org/"
[2025-06-04 10:22:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:22:08] 
[2025-06-04 10:22:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:22:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:22:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:22:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:22:08] 
[2025-06-04 10:22:08] 2025-06-04 14:21:55,431 | INFO     | **************************************
[2025-06-04 10:22:08] 2025-06-04 14:21:55,934 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:22:08] 2025-06-04 14:21:55,951 | INFO     | sufficient remaining disk space (94667538432 B)
[2025-06-04 10:22:08] 2025-06-04 14:21:55,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:22:08] 2025-06-04 14:21:55,951 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:22:08] 2025-06-04 14:21:55,951 | INFO     | update_server=False
[2025-06-04 10:22:08] 2025-06-04 14:21:55,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:22:08] 2025-06-04 14:21:55,952 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:22:08] 2025-06-04 14:21:55,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:22:08] 2025-06-04 14:21:55,952 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:22:08] 2025-06-04 14:21:55,953 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:22:08] 2025-06-04 14:21:55,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:22:08] 2025-06-04 14:21:56,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:22:08] 2025-06-04 14:21:56,239 | INFO     | aborting loop
[2025-06-04 10:22:08] 2025-06-04 14:21:56,957 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:56,983 | INFO     | [job] validate thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:56,986 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:57,027 | INFO     | all data control threads have been joined
[2025-06-04 10:22:08] 2025-06-04 14:21:57,101 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:57,245 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:57,288 | INFO     | all job control threads have been joined
[2025-06-04 10:22:08] 2025-06-04 14:21:57,332 | INFO     | all payload control threads have been joined
[2025-06-04 10:22:08] 2025-06-04 14:21:57,362 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:57,368 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:57,421 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:57,644 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:57,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:22:08] 2025-06-04 14:21:57,958 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:58,032 | INFO     | [data] control thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:58,037 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:58,293 | INFO     | [job] control thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:58,337 | INFO     | [payload] control thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:21:58,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:22:08] 2025-06-04 14:21:59,659 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:22:01,854 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:22:08] 2025-06-04 14:22:03,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139676398888768)>', '<ExcThread(monitor, started 139675691906816)>']
[2025-06-04 10:22:08] 2025-06-04 14:22:03,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:22:08] 2025-06-04 14:22:03,992 | INFO     | [monitor] control thread has ended
[2025-06-04 10:22:08] 2025-06-04 14:22:08,430 | INFO     | all workflow threads have been joined
[2025-06-04 10:22:08] 2025-06-04 14:22:08,430 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:22:08] 2025-06-04 14:22:08,430 | INFO     | traces error code: 0
[2025-06-04 10:22:08] 2025-06-04 14:22:08,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:22:08] 2025-06-04 14:22:08,611 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:22:08] 2025-06-04 14:22:08,614 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:22:08] 2025-06-04 14:22:08,618 [wrapper] pilotpid: 3064772
[2025-06-04 10:22:08] 2025-06-04 14:22:08,622 [wrapper] Pilot exit status: 0
[2025-06-04 10:22:08] 2025-06-04 14:22:08,633 [wrapper] pandaids: 6679585579
[2025-06-04 10:22:08] 2025-06-04 14:22:08,770 [wrapper] cleanup supervisor_pilot 1017604 3064773
[2025-06-04 10:22:08] 2025-06-04 14:22:08,773 [wrapper] Test setup, not cleaning
[2025-06-04 10:22:08] 2025-06-04 14:22:08,776 [wrapper] apfmon messages muted
[2025-06-04 10:22:08] 2025-06-04 14:22:08,779 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:22:08] 2025-06-04 14:22:08,781 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:22:08]  *** Error codes and diagnostics ***
[2025-06-04 10:22:08]     "exeErrorCode": 0,
[2025-06-04 10:22:08]     "exeErrorDiag": "",
[2025-06-04 10:22:08]     "pilotErrorCode": 0,
[2025-06-04 10:22:08]     "pilotErrorDiag": "",
[2025-06-04 10:22:08]  *** Listing of results directory ***
[2025-06-04 10:22:08] total 386228
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 05:04 pilot3.tar.gz
[2025-06-04 10:22:08] -rwx------. 1 boincer umatlas     37140 Jun  4 05:24 runpilot2-wrapper.sh
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 05:24 queuedata.json
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:22:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:32 run_atlas
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:32 job.xml
[2025-06-04 10:22:08] -rw-r--r--. 2 boincer umatlas 216911482 Jun  4 09:32 EVNT.45006593._002032.pool.root.1
[2025-06-04 10:22:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:32 start_atlas.sh
[2025-06-04 10:22:08] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:32 shared
[2025-06-04 10:22:08] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 09:32 input.tar.gz
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:32 boinc_lockfile
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 09:32 pandaJob.out
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas    986819 Jun  4 09:32 agis_schedconf.cvmfs.json
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:22:08] drwx------. 4 boincer umatlas      4096 Jun  4 09:32 pilot3
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 10:11 init_data.xml
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas        95 Jun  4 10:21 pilot_heartbeat.json
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas 173571189 Jun  4 10:21 HITS.45006595._056496.pool.root.1
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:21 boinc_task_state.xml
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas      1036 Jun  4 10:21 memory_monitor_summary.json
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas    280357 Jun  4 10:21 log.45006595._056496.job.log.tgz.1
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas      7686 Jun  4 10:21 heartbeat.json
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:22 boinc_mmap_file
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas      4476 Jun  4 10:22 pilotlog.txt
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:22 wrapper_checkpoint.txt
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas    311464 Jun  4 10:22 log.45006595._056496.job.log.1
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas       357 Jun  4 10:22 output.list
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:22 runtime_log
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas    614400 Jun  4 10:22 result.tar.gz
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas       648 Jun  4 10:22 VwMMDm6Wzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZxnKDmDHqEhm.diag
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 10:22 runtime_log.err
[2025-06-04 10:22:08] -rw-r--r--. 1 boincer umatlas     21851 Jun  4 10:22 stderr.txt
[2025-06-04 10:22:08] HITS file was successfully produced:
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas 173571189 Jun  4 10:21 shared/HITS.pool.root.1
[2025-06-04 10:22:08]  *** Contents of shared directory: ***
[2025-06-04 10:22:08] total 382452
[2025-06-04 10:22:08] -rw-r--r--. 2 boincer umatlas 216911482 Jun  4 09:32 ATLAS.root_0
[2025-06-04 10:22:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:32 start_atlas.sh
[2025-06-04 10:22:08] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 09:32 input.tar.gz
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas 173571189 Jun  4 10:21 HITS.pool.root.1
[2025-06-04 10:22:08] -rw-------. 1 boincer umatlas    614400 Jun  4 10:22 result.tar.gz
10:22:10 (3057317): run_atlas exited; CPU time 18637.662252
10:22:10 (3057317): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN