Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:29:12 (29808): wrapper (7.7.26015): starting
09:29:12 (29808): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:29:12] Arguments: --nthreads 8
[2025-06-04 09:29:12] Threads: 8
[2025-06-04 09:29:12] Checking for CVMFS
[2025-06-04 09:29:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:29:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:29:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:29:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:29:12] 2.11.2.0 2861 18708 96684 146781 0 56 11958338 20275200 1 130560 0 8523955 99.957 3950665 4834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:29:12] CVMFS is ok
[2025-06-04 09:29:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:29:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:29:12] Further information can be found at the LHC@home message board.
[2025-06-04 09:29:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:29:12] Checking for apptainer binary...
[2025-06-04 09:29:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:29:12] Running /usr/bin/apptainer --version
[2025-06-04 09:29:12] apptainer version 1.3.2-1.el7
[2025-06-04 09:29:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:29:14] c-204-18.aglt2.org
[2025-06-04 09:29:14] apptainer works
[2025-06-04 09:29:14] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:29:14] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:29:14] Starting ATLAS job with PandaID=6679461886
[2025-06-04 09:29:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:23:22]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:23:22] 2025-06-04 16:23:08,425 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 12:23:22] 2025-06-04 16:23:08,426 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679461886/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:23:22] 2025-06-04 16:23:08,427 | INFO     | extracted standard info from prmon json
[2025-06-04 12:23:22] 2025-06-04 16:23:08,427 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:23:22] 2025-06-04 16:23:08,427 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:23:22] 2025-06-04 16:23:08,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:23:22] 2025-06-04 16:23:08,428 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:23:22] 2025-06-04 16:23:08,432 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:23:22] 2025-06-04 16:23:08,432 | INFO     | sum of square deviations: 1550429070.0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,433 | INFO     | sum of deviations: -29262891879.0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,434 | INFO     | mean x: 1749048988.0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,434 | INFO     | mean y: 2565882.0643274854
[2025-06-04 12:23:22] 2025-06-04 16:23:08,434 | INFO     | -- intersect: 33014222085.67148
[2025-06-04 12:23:22] 2025-06-04 16:23:08,434 | INFO     | intersect: 33014222085.67148
[2025-06-04 12:23:22] 2025-06-04 16:23:08,435 | INFO     | chi2: 2.523845311803568
[2025-06-04 12:23:22] 2025-06-04 16:23:08,435 | INFO     | sum of square deviations: 1418361477.5
[2025-06-04 12:23:22] 2025-06-04 16:23:08,436 | INFO     | sum of deviations: -16255523817.000004
[2025-06-04 12:23:22] 2025-06-04 16:23:08,436 | INFO     | mean x: 1749048835.5
[2025-06-04 12:23:22] 2025-06-04 16:23:08,436 | INFO     | mean y: 2580592.638554217
[2025-06-04 12:23:22] 2025-06-04 16:23:08,436 | INFO     | -- intersect: 20048038294.07022
[2025-06-04 12:23:22] 2025-06-04 16:23:08,436 | INFO     | intersect: 20048038294.07022
[2025-06-04 12:23:22] 2025-06-04 16:23:08,437 | INFO     | chi2: 1.7643286573370114
[2025-06-04 12:23:22] 2025-06-04 16:23:08,437 | INFO     | current chi2=1.7643286573370114 (change=30.093629388236852 %)
[2025-06-04 12:23:22] 2025-06-04 16:23:08,437 | INFO     | sum of square deviations: 1294014960.0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,438 | INFO     | sum of deviations: -14775330818.000002
[2025-06-04 12:23:22] 2025-06-04 16:23:08,438 | INFO     | mean x: 1749048683.0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,438 | INFO     | mean y: 2582408.5217391304
[2025-06-04 12:23:22] 2025-06-04 16:23:08,438 | INFO     | -- intersect: 19973582518.22079
[2025-06-04 12:23:22] 2025-06-04 16:23:08,438 | INFO     | intersect: 19973582518.22079
[2025-06-04 12:23:22] 2025-06-04 16:23:08,439 | INFO     | chi2: 1.764488887569114
[2025-06-04 12:23:22] 2025-06-04 16:23:08,439 | INFO     | current chi2=1.764488887569114 (change=-0.009081654454589956 %)
[2025-06-04 12:23:22] 2025-06-04 16:23:08,439 | INFO     | right removable region: 160
[2025-06-04 12:23:22] 2025-06-04 16:23:08,439 | INFO     | sum of square deviations: 1418361477.5
[2025-06-04 12:23:22] 2025-06-04 16:23:08,440 | INFO     | sum of deviations: -56488544584.5
[2025-06-04 12:23:22] 2025-06-04 16:23:08,440 | INFO     | mean x: 1749049140.5
[2025-06-04 12:23:22] 2025-06-04 16:23:08,440 | INFO     | mean y: 2596913.174698795
[2025-06-04 12:23:22] 2025-06-04 16:23:08,440 | INFO     | -- intersect: 69661313623.22131
[2025-06-04 12:23:22] 2025-06-04 16:23:08,441 | INFO     | intersect: 69661313623.22131
[2025-06-04 12:23:22] 2025-06-04 16:23:08,441 | INFO     | chi2: 0.9891640663524673
[2025-06-04 12:23:22] 2025-06-04 16:23:08,441 | INFO     | current chi2=0.9891640663524673 (change=60.80726256374248 %)
[2025-06-04 12:23:22] 2025-06-04 16:23:08,441 | INFO     | sum of square deviations: 1294014960.0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,442 | INFO     | sum of deviations: -58278160480.0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,442 | INFO     | mean x: 1749049293.0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,442 | INFO     | mean y: 2599045.9937888198
[2025-06-04 12:23:22] 2025-06-04 16:23:08,442 | INFO     | -- intersect: 78774003191.80408
[2025-06-04 12:23:22] 2025-06-04 16:23:08,443 | INFO     | intersect: 78774003191.80408
[2025-06-04 12:23:22] 2025-06-04 16:23:08,443 | INFO     | chi2: 0.9367097925807202
[2025-06-04 12:23:22] 2025-06-04 16:23:08,443 | INFO     | current chi2=0.9367097925807202 (change=5.302889131948735 %)
[2025-06-04 12:23:22] 2025-06-04 16:23:08,443 | INFO     | left removable region: 20
[2025-06-04 12:23:22] 2025-06-04 16:23:08,443 | INFO     | sum of square deviations: 850825255.0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,444 | INFO     | sum of deviations: -36442647998.99999
[2025-06-04 12:23:22] 2025-06-04 16:23:08,444 | INFO     | mean x: 1749049262.5
[2025-06-04 12:23:22] 2025-06-04 16:23:08,444 | INFO     | mean y: 2609964.5857142857
[2025-06-04 12:23:22] 2025-06-04 16:23:08,444 | INFO     | -- intersect: 74918094938.28697
[2025-06-04 12:23:22] 2025-06-04 16:23:08,445 | INFO     | intersect: 74918094938.28697
[2025-06-04 12:23:22] 2025-06-04 16:23:08,445 | INFO     | chi2: 0.13435254597443674
[2025-06-04 12:23:22] 2025-06-04 16:23:08,445 | INFO     | -- intersect: 74918094938.28697
[2025-06-04 12:23:22] 2025-06-04 16:23:08,445 | INFO     | current memory leak: -42.83 B/s (using 140 data points, chi2=0.13)
[2025-06-04 12:23:22] 2025-06-04 16:23:08,446 | INFO     | ..............................
[2025-06-04 12:23:22] 2025-06-04 16:23:08,446 | INFO     | . Timing measurements:
[2025-06-04 12:23:22] 2025-06-04 16:23:08,446 | INFO     | . get job = 0 s
[2025-06-04 12:23:22] 2025-06-04 16:23:08,446 | INFO     | . initial setup = 2 s
[2025-06-04 12:23:22] 2025-06-04 16:23:08,446 | INFO     | . payload setup = 11 s
[2025-06-04 12:23:22] 2025-06-04 16:23:08,446 | INFO     | . stage-in = 0 s
[2025-06-04 12:23:22] 2025-06-04 16:23:08,446 | INFO     | . payload execution = 10377 s
[2025-06-04 12:23:22] 2025-06-04 16:23:08,446 | INFO     | . stage-out = 0 s
[2025-06-04 12:23:22] 2025-06-04 16:23:08,446 | INFO     | . log creation = 0 s
[2025-06-04 12:23:22] 2025-06-04 16:23:08,447 | INFO     | ..............................
[2025-06-04 12:23:22] 2025-06-04 16:23:08,539 | INFO     | 
[2025-06-04 12:23:22] 2025-06-04 16:23:08,539 | INFO     | job summary report
[2025-06-04 12:23:22] 2025-06-04 16:23:08,539 | INFO     | --------------------------------------------------
[2025-06-04 12:23:22] 2025-06-04 16:23:08,539 | INFO     | PanDA job id: 6679461886
[2025-06-04 12:23:22] 2025-06-04 16:23:08,540 | INFO     | task id: 44871837
[2025-06-04 12:23:22] 2025-06-04 16:23:08,540 | INFO     | errors: (none)
[2025-06-04 12:23:22] 2025-06-04 16:23:08,540 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:23:22] 2025-06-04 16:23:08,540 | INFO     | pilot state: finished 
[2025-06-04 12:23:22] 2025-06-04 16:23:08,540 | INFO     | transexitcode: 0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,540 | INFO     | exeerrorcode: 0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,540 | INFO     | exeerrordiag: 
[2025-06-04 12:23:22] 2025-06-04 16:23:08,540 | INFO     | exitcode: 0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,540 | INFO     | exitmsg: OK
[2025-06-04 12:23:22] 2025-06-04 16:23:08,541 | INFO     | cpuconsumptiontime: 77120 s
[2025-06-04 12:23:22] 2025-06-04 16:23:08,541 | INFO     | nevents: 400
[2025-06-04 12:23:22] 2025-06-04 16:23:08,541 | INFO     | neventsw: 0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,541 | INFO     | pid: 7734
[2025-06-04 12:23:22] 2025-06-04 16:23:08,541 | INFO     | pgrp: 7734
[2025-06-04 12:23:22] 2025-06-04 16:23:08,541 | INFO     | corecount: 8
[2025-06-04 12:23:22] 2025-06-04 16:23:08,541 | INFO     | event service: False
[2025-06-04 12:23:22] 2025-06-04 16:23:08,541 | INFO     | sizes: {0: 2397171, 1: 2397370, 7: 2397576, 11: 2397604, 10392: 2426116, 10395: 2435241, 10402: 2435355}
[2025-06-04 12:23:22] 2025-06-04 16:23:08,541 | INFO     | --------------------------------------------------
[2025-06-04 12:23:22] 2025-06-04 16:23:08,542 | INFO     | 
[2025-06-04 12:23:22] 2025-06-04 16:23:08,542 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:23:22] 2025-06-04 16:23:08,569 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,569 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,572 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,572 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,572 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:23:22] 2025-06-04 16:23:08,572 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:23:22] 2025-06-04 16:23:08,573 | INFO     | job 6679461886 has completed (purged errors)
[2025-06-04 12:23:22] 2025-06-04 16:23:08,573 | INFO     | overall cleanup function is called
[2025-06-04 12:23:22] 2025-06-04 16:23:09,581 | INFO     | --- collectZombieJob: --- 10, [7734]
[2025-06-04 12:23:22] 2025-06-04 16:23:09,581 | INFO     | zombie collector waiting for pid 7734
[2025-06-04 12:23:22] 2025-06-04 16:23:09,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:23:22] 2025-06-04 16:23:09,582 | INFO     | collected zombie processes
[2025-06-04 12:23:22] 2025-06-04 16:23:09,582 | INFO     | will attempt to kill all subprocesses of pid=7734
[2025-06-04 12:23:22] 2025-06-04 16:23:09,672 | INFO     | process IDs to be killed: [7734] (in reverse order)
[2025-06-04 12:23:22] 2025-06-04 16:23:09,728 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:23:22] 2025-06-04 16:23:09,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:23:22] 2025-06-04 16:23:09,733 | INFO     | did not find any defunct processes belonging to 7734
[2025-06-04 12:23:22] 2025-06-04 16:23:09,736 | INFO     | did not find any defunct processes belonging to 7734
[2025-06-04 12:23:22] 2025-06-04 16:23:09,736 | INFO     | ready for new job
[2025-06-04 12:23:22] 2025-06-04 16:23:09,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:23:22] 2025-06-04 16:23:09,738 | INFO     | **************************************
[2025-06-04 12:23:22] 2025-06-04 16:23:09,739 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:23:22] 2025-06-04 16:23:09,739 | INFO     | **************************************
[2025-06-04 12:23:22] 2025-06-04 16:23:09,739 | INFO     | 
[2025-06-04 12:23:22] 2025-06-04 16:23:09,739 | INFO     | architecture information:
[2025-06-04 12:23:22] 2025-06-04 16:23:09,740 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:23:22] 2025-06-04 16:23:09,758 | INFO     | cat /etc/os-release:
[2025-06-04 12:23:22] NAME="CentOS Linux"
[2025-06-04 12:23:22] VERSION="7 (Core)"
[2025-06-04 12:23:22] ID="centos"
[2025-06-04 12:23:22] ID_LIKE="rhel fedora"
[2025-06-04 12:23:22] VERSION_ID="7"
[2025-06-04 12:23:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:23:22] ANSI_COLOR="0;31"
[2025-06-04 12:23:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:23:22] HOME_URL="https://www.centos.org/"
[2025-06-04 12:23:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:23:22] 
[2025-06-04 12:23:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:23:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:23:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:23:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:23:22] 
[2025-06-04 12:23:22] 2025-06-04 16:23:09,759 | INFO     | **************************************
[2025-06-04 12:23:22] 2025-06-04 16:23:10,262 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:23:22] 2025-06-04 16:23:10,281 | INFO     | sufficient remaining disk space (18557698048 B)
[2025-06-04 12:23:22] 2025-06-04 16:23:10,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:23:22] 2025-06-04 16:23:10,282 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:23:22] 2025-06-04 16:23:10,282 | INFO     | update_server=False
[2025-06-04 12:23:22] 2025-06-04 16:23:10,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:23:22] 2025-06-04 16:23:10,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:23:22] 2025-06-04 16:23:10,283 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:23:22] 2025-06-04 16:23:10,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:23:22] 2025-06-04 16:23:10,313 | INFO     | aborting loop
[2025-06-04 12:23:22] 2025-06-04 16:23:10,563 | INFO     | all data control threads have been joined
[2025-06-04 12:23:22] 2025-06-04 16:23:10,670 | INFO     | all job control threads have been joined
[2025-06-04 12:23:22] 2025-06-04 16:23:10,738 | INFO     | all payload control threads have been joined
[2025-06-04 12:23:22] 2025-06-04 16:23:10,770 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:23:22] 2025-06-04 16:23:10,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:23:22] 2025-06-04 16:23:10,771 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:23:22] 2025-06-04 16:23:11,288 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:11,289 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:11,318 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:11,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:11,569 | INFO     | [data] control thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:11,586 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:11,598 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:11,675 | INFO     | [job] control thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:11,739 | INFO     | [payload] control thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:12,114 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:12,284 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:12,303 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:12,490 | INFO     | [job] validate thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:12,550 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:12,776 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:12,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:23:22] 2025-06-04 16:23:16,792 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:23:22] 2025-06-04 16:23:16,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140078671423296)>', '<ExcThread(monitor, started 140077917259520)>']
[2025-06-04 12:23:22] 2025-06-04 16:23:17,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:23:22] 2025-06-04 16:23:17,799 | INFO     | [monitor] control thread has ended
[2025-06-04 12:23:22] 2025-06-04 16:23:21,868 | INFO     | all workflow threads have been joined
[2025-06-04 12:23:22] 2025-06-04 16:23:21,869 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:23:22] 2025-06-04 16:23:21,876 | INFO     | traces error code: 0
[2025-06-04 12:23:22] 2025-06-04 16:23:21,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:23:22] 2025-06-04 16:23:21,996 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:23:22] 2025-06-04 16:23:22,001 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:23:22] 2025-06-04 16:23:22,006 [wrapper] pilotpid: 1005
[2025-06-04 12:23:22] 2025-06-04 16:23:22,011 [wrapper] Pilot exit status: 0
[2025-06-04 12:23:22] 2025-06-04 16:23:22,029 [wrapper] pandaids: 6679461886
[2025-06-04 12:23:22] 2025-06-04 16:23:22,074 [wrapper] cleanup supervisor_pilot  8771 1006
[2025-06-04 12:23:22] 2025-06-04 16:23:22,078 [wrapper] Test setup, not cleaning
[2025-06-04 12:23:22] 2025-06-04 16:23:22,083 [wrapper] apfmon messages muted
[2025-06-04 12:23:22] 2025-06-04 16:23:22,088 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:23:22] 2025-06-04 16:23:22,093 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:23:22]  *** Error codes and diagnostics ***
[2025-06-04 12:23:22]     "exeErrorCode": 0,
[2025-06-04 12:23:22]     "exeErrorDiag": "",
[2025-06-04 12:23:22]     "pilotErrorCode": 0,
[2025-06-04 12:23:22]     "pilotErrorDiag": "",
[2025-06-04 12:23:22]  *** Listing of results directory ***
[2025-06-04 12:23:22] total 429116
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 05:03 queuedata.json
[2025-06-04 12:23:22] -rwx------ 1 boincer umatlas     37140 Jun  4 05:04 runpilot2-wrapper.sh
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 05:04 pilot3.tar.gz
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:23:22] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:29 run_atlas
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:29 job.xml
[2025-06-04 12:23:22] -rw-r--r-- 2 boincer umatlas 226749028 Jun  4 09:29 EVNT.44871834._002737.pool.root.1
[2025-06-04 12:23:22] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:29 start_atlas.sh
[2025-06-04 12:23:22] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:29 shared
[2025-06-04 12:23:22] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 09:29 input.tar.gz
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:29 boinc_lockfile
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 09:29 pandaJob.out
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas    986819 Jun  4 09:29 agis_schedconf.cvmfs.json
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas   1598969 Jun  4 09:29 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:23:22] drwx------ 4 boincer umatlas      4096 Jun  4 09:29 pilot3
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas      5906 Jun  4 12:21 init_data.xml
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas 206232684 Jun  4 12:22 HITS.44871837._102191.pool.root.1
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas      1052 Jun  4 12:22 memory_monitor_summary.json
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas       530 Jun  4 12:22 boinc_task_state.xml
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas        95 Jun  4 12:22 pilot_heartbeat.json
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas    370861 Jun  4 12:23 log.44871837._102191.job.log.tgz.1
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas      7758 Jun  4 12:23 heartbeat.json
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas        28 Jun  4 12:23 wrapper_checkpoint.txt
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 12:23 boinc_mmap_file
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas      4353 Jun  4 12:23 pilotlog.txt
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas    932171 Jun  4 12:23 log.44871837._102191.job.log.1
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas       357 Jun  4 12:23 output.list
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas       620 Jun  4 12:23 runtime_log
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas   1320960 Jun  4 12:23 result.tar.gz
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas      8660 Jun  4 12:23 runtime_log.err
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas       662 Jun  4 12:23 8KRMDmKEzg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmP1aKDmgOz4Bo.diag
[2025-06-04 12:23:22] -rw-r--r-- 1 boincer umatlas     20752 Jun  4 12:23 stderr.txt
[2025-06-04 12:23:22] HITS file was successfully produced:
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas 206232684 Jun  4 12:22 shared/HITS.pool.root.1
[2025-06-04 12:23:22]  *** Contents of shared directory: ***
[2025-06-04 12:23:22] total 424648
[2025-06-04 12:23:22] -rw-r--r-- 2 boincer umatlas 226749028 Jun  4 09:29 ATLAS.root_0
[2025-06-04 12:23:22] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:29 start_atlas.sh
[2025-06-04 12:23:22] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 09:29 input.tar.gz
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas 206232684 Jun  4 12:22 HITS.pool.root.1
[2025-06-04 12:23:22] -rw------- 1 boincer umatlas   1320960 Jun  4 12:23 result.tar.gz
12:23:24 (29808): run_atlas exited; CPU time 77057.627790
12:23:24 (29808): called boinc_finish(0)

</stderr_txt>
]]>

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