Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:06:54 (31133): wrapper (7.7.26015): starting
00:06:54 (31133): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 00:06:54] Arguments: --nthreads 8
[2025-06-05 00:06:54] Threads: 8
[2025-06-05 00:06:54] Checking for CVMFS
[2025-06-05 00:06:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:06:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:06:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:06:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:06:55] 2.11.2.0 17834 33805 89744 146795 3 254 20876313 25165825 2309 130560 0 18783723 99.807 20645757 2158 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 00:06:55] CVMFS is ok
[2025-06-05 00:06:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:06:55] Checking for apptainer binary...
[2025-06-05 00:06:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:06:55] Running /usr/bin/apptainer --version
[2025-06-05 00:06:55] apptainer version 1.3.2-1.el7
[2025-06-05 00:06:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:06:57] cg-vwn466.simple-grid.lan
[2025-06-05 00:06:57] apptainer works
[2025-06-05 00:06:58] Set ATHENA_PROC_NUMBER=8
[2025-06-05 00:06:58] Set ATHENA_CORE_NUMBER=8
[2025-06-05 00:06:58] Starting ATLAS job with PandaID=6679567905
[2025-06-05 00:06:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:11:50]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:11:50] 2025-06-05 01:36:00,922 | INFO     | monitor loop #897: job 0:6679567905 is in state 'finished'
[2025-06-05 04:11:50] 2025-06-05 01:36:00,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:11:50] 2025-06-05 01:36:03,427 | INFO     | monitor loop #898: job 0:6679567905 is in state 'finished'
[2025-06-05 04:11:50] 2025-06-05 01:36:03,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:11:50] 2025-06-05 01:36:04,797 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 04:11:50] 2025-06-05 01:36:04,797 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6679567905/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:11:50] 2025-06-05 01:36:04,798 | INFO     | extracted standard info from prmon json
[2025-06-05 04:11:50] 2025-06-05 01:36:04,798 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:11:50] 2025-06-05 01:36:04,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:11:50] 2025-06-05 01:36:04,800 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:11:50] 2025-06-05 01:36:04,800 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:11:50] 2025-06-05 01:36:04,804 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:11:50] 2025-06-05 01:36:04,805 | INFO     | sum of square deviations: 2443580700.0
[2025-06-05 04:11:50] 2025-06-05 01:36:04,806 | INFO     | sum of deviations: 18387706471.0
[2025-06-05 04:11:50] 2025-06-05 01:36:04,806 | INFO     | mean x: 1749081172.0
[2025-06-05 04:11:50] 2025-06-05 01:36:04,807 | INFO     | mean y: 2472854.3316582916
[2025-06-05 04:11:50] 2025-06-05 01:36:04,807 | INFO     | -- intersect: -13159192395.638872
[2025-06-05 04:11:50] 2025-06-05 01:36:04,807 | INFO     | intersect: -13159192395.638872
[2025-06-05 04:11:50] 2025-06-05 01:36:04,810 | INFO     | chi2: 4.718745160439542
[2025-06-05 04:11:50] 2025-06-05 01:36:04,811 | INFO     | sum of square deviations: 2263977332.5
[2025-06-05 04:11:50] 2025-06-05 01:36:04,812 | INFO     | sum of deviations: 32027731244.5
[2025-06-05 04:11:50] 2025-06-05 01:36:04,813 | INFO     | mean x: 1749081019.5
[2025-06-05 04:11:50] 2025-06-05 01:36:04,813 | INFO     | mean y: 2484197.1597938146
[2025-06-05 04:11:50] 2025-06-05 01:36:04,813 | INFO     | -- intersect: -24741180862.217323
[2025-06-05 04:11:50] 2025-06-05 01:36:04,813 | INFO     | intersect: -24741180862.217323
[2025-06-05 04:11:50] 2025-06-05 01:36:04,813 | INFO     | chi2: 3.9012787830330513
[2025-06-05 04:11:50] 2025-06-05 01:36:04,814 | INFO     | current chi2=3.9012787830330513 (change=17.323808546811737 %)
[2025-06-05 04:11:50] 2025-06-05 01:36:04,814 | INFO     | right removable region: 193
[2025-06-05 04:11:50] 2025-06-05 01:36:04,814 | INFO     | sum of square deviations: 2263977332.5
[2025-06-05 04:11:50] 2025-06-05 01:36:04,818 | INFO     | sum of deviations: -41275720851.5
[2025-06-05 04:11:50] 2025-06-05 01:36:04,819 | INFO     | mean x: 1749081324.5
[2025-06-05 04:11:50] 2025-06-05 01:36:04,819 | INFO     | mean y: 2523353.180412371
[2025-06-05 04:11:50] 2025-06-05 01:36:04,819 | INFO     | -- intersect: 31890913515.158276
[2025-06-05 04:11:50] 2025-06-05 01:36:04,819 | INFO     | intersect: 31890913515.158276
[2025-06-05 04:11:50] 2025-06-05 01:36:04,819 | INFO     | chi2: 1.1170386451942558
[2025-06-05 04:11:50] 2025-06-05 01:36:04,820 | INFO     | current chi2=1.1170386451942558 (change=76.32763357175648 %)
[2025-06-05 04:11:50] 2025-06-05 01:36:04,820 | INFO     | sum of square deviations: 2093397390.0
[2025-06-05 04:11:50] 2025-06-05 01:36:04,821 | INFO     | sum of deviations: -49563230109.0
[2025-06-05 04:11:50] 2025-06-05 01:36:04,821 | INFO     | mean x: 1749081477.0
[2025-06-05 04:11:50] 2025-06-05 01:36:04,822 | INFO     | mean y: 2530674.433862434
[2025-06-05 04:11:50] 2025-06-05 01:36:04,822 | INFO     | -- intersect: 41413744874.87795
[2025-06-05 04:11:50] 2025-06-05 01:36:04,822 | INFO     | intersect: 41413744874.87795
[2025-06-05 04:11:50] 2025-06-05 01:36:04,822 | INFO     | chi2: 0.9720125800926309
[2025-06-05 04:11:50] 2025-06-05 01:36:04,822 | INFO     | current chi2=0.9720125800926309 (change=12.983083953769967 %)
[2025-06-05 04:11:50] 2025-06-05 01:36:04,822 | INFO     | left removable region: 20
[2025-06-05 04:11:50] 2025-06-05 01:36:04,823 | INFO     | sum of square deviations: 1605470102.0
[2025-06-05 04:11:50] 2025-06-05 01:36:04,824 | INFO     | sum of deviations: -29360733317.000004
[2025-06-05 04:11:50] 2025-06-05 01:36:04,824 | INFO     | mean x: 1749081599.0
[2025-06-05 04:11:50] 2025-06-05 01:36:04,824 | INFO     | mean y: 2538934.12716763
[2025-06-05 04:11:50] 2025-06-05 01:36:04,824 | INFO     | -- intersect: 31989630013.516785
[2025-06-05 04:11:50] 2025-06-05 01:36:04,824 | INFO     | intersect: 31989630013.516785
[2025-06-05 04:11:50] 2025-06-05 01:36:04,825 | INFO     | chi2: 0.08624331274640264
[2025-06-05 04:11:50] 2025-06-05 01:36:04,825 | INFO     | -- intersect: 31989630013.516785
[2025-06-05 04:11:50] 2025-06-05 01:36:04,825 | INFO     | current memory leak: -18.29 B/s (using 173 data points, chi2=0.09)
[2025-06-05 04:11:50] 2025-06-05 01:36:04,829 | INFO     | ..............................
[2025-06-05 04:11:50] 2025-06-05 01:36:04,829 | INFO     | . Timing measurements:
[2025-06-05 04:11:50] 2025-06-05 01:36:04,829 | INFO     | . get job = 0 s
[2025-06-05 04:11:50] 2025-06-05 01:36:04,830 | INFO     | . initial setup = 2 s
[2025-06-05 04:11:50] 2025-06-05 01:36:04,830 | INFO     | . payload setup = 101 s
[2025-06-05 04:11:50] 2025-06-05 01:36:04,830 | INFO     | . stage-in = 0 s
[2025-06-05 04:11:50] 2025-06-05 01:36:04,830 | INFO     | . payload execution = 12285 s
[2025-06-05 04:11:50] 2025-06-05 01:36:04,830 | INFO     | . stage-out = 3 s
[2025-06-05 04:11:50] 2025-06-05 01:36:04,830 | INFO     | . log creation = 1 s
[2025-06-05 04:11:50] 2025-06-05 01:36:04,830 | INFO     | ..............................
[2025-06-05 04:11:50] 2025-06-05 01:36:04,999 | INFO     | 
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | job summary report
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | --------------------------------------------------
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | PanDA job id: 6679567905
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | task id: 45006595
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | errors: (none)
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | pilot state: finished 
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | transexitcode: 0
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | exeerrorcode: 0
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | exeerrordiag: 
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | exitcode: 0
[2025-06-05 04:11:50] 2025-06-05 01:36:05,000 | INFO     | exitmsg: OK
[2025-06-05 04:11:50] 2025-06-05 01:36:05,001 | INFO     | cpuconsumptiontime: 46164 s
[2025-06-05 04:11:50] 2025-06-05 01:36:05,001 | INFO     | nevents: 400
[2025-06-05 04:11:50] 2025-06-05 01:36:05,001 | INFO     | neventsw: 0
[2025-06-05 04:11:50] 2025-06-05 01:36:05,001 | INFO     | pid: 21912
[2025-06-05 04:11:50] 2025-06-05 01:36:05,001 | INFO     | pgrp: 21912
[2025-06-05 04:11:50] 2025-06-05 01:36:05,001 | INFO     | corecount: 8
[2025-06-05 04:11:50] 2025-06-05 01:36:05,001 | INFO     | event service: False
[2025-06-05 04:11:50] 2025-06-05 01:36:05,001 | INFO     | sizes: {0: 2397121, 1: 2397320, 12: 2397320, 16: 2397554, 22: 2397582, 12390: 2426701, 12394: 2435698, 12486: 2435812}
[2025-06-05 04:11:50] 2025-06-05 01:36:05,001 | INFO     | --------------------------------------------------
[2025-06-05 04:11:50] 2025-06-05 01:36:05,001 | INFO     | 
[2025-06-05 04:11:50] 2025-06-05 01:36:05,001 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-05 04:11:50] 2025-06-05 01:36:05,437 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,437 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,437 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,437 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,438 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,438 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,439 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:11:50] 2025-06-05 01:36:05,439 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,439 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:11:50] 2025-06-05 01:36:05,439 | INFO     | job 6679567905 has completed (purged errors)
[2025-06-05 04:11:50] 2025-06-05 01:36:05,439 | INFO     | overall cleanup function is called
[2025-06-05 04:11:50] 2025-06-05 01:36:06,448 | INFO     | --- collectZombieJob: --- 10, [21912]
[2025-06-05 04:11:50] 2025-06-05 01:36:06,449 | INFO     | zombie collector waiting for pid 21912
[2025-06-05 04:11:50] 2025-06-05 01:36:06,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:11:50] 2025-06-05 01:36:06,449 | INFO     | collected zombie processes
[2025-06-05 04:11:50] 2025-06-05 01:36:06,449 | INFO     | will attempt to kill all subprocesses of pid=21912
[2025-06-05 04:11:50] 2025-06-05 01:36:06,574 | INFO     | process IDs to be killed: [21912] (in reverse order)
[2025-06-05 04:11:50] 2025-06-05 01:36:07,289 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:11:50] 2025-06-05 01:36:07,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:11:50] 2025-06-05 01:36:07,293 | INFO     | did not find any defunct processes belonging to 21912
[2025-06-05 04:11:50] 2025-06-05 01:36:07,295 | INFO     | did not find any defunct processes belonging to 21912
[2025-06-05 04:11:50] 2025-06-05 01:36:07,296 | INFO     | ready for new job
[2025-06-05 04:11:50] 2025-06-05 01:36:07,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:11:50] 2025-06-05 01:36:07,297 | INFO     | **************************************
[2025-06-05 04:11:50] 2025-06-05 01:36:07,297 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:11:50] 2025-06-05 01:36:07,297 | INFO     | **************************************
[2025-06-05 04:11:50] 2025-06-05 01:36:07,298 | INFO     | 
[2025-06-05 04:11:50] 2025-06-05 01:36:07,298 | INFO     | pilot is running in a VM
[2025-06-05 04:11:50] 2025-06-05 01:36:07,298 | INFO     | architecture information:
[2025-06-05 04:11:50] 2025-06-05 01:36:07,308 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:11:50] 2025-06-05 01:36:07,499 | INFO     | cat /etc/os-release:
[2025-06-05 04:11:50] NAME="CentOS Linux"
[2025-06-05 04:11:50] VERSION="7 (Core)"
[2025-06-05 04:11:50] ID="centos"
[2025-06-05 04:11:50] ID_LIKE="rhel fedora"
[2025-06-05 04:11:50] VERSION_ID="7"
[2025-06-05 04:11:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:11:50] ANSI_COLOR="0;31"
[2025-06-05 04:11:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:11:50] HOME_URL="https://www.centos.org/"
[2025-06-05 04:11:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:11:50] 
[2025-06-05 04:11:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:11:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:11:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:11:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:11:50] 
[2025-06-05 04:11:50] 2025-06-05 01:36:07,500 | INFO     | **************************************
[2025-06-05 04:11:50] 2025-06-05 01:36:08,004 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-05 04:11:50] 2025-06-05 01:36:08,260 | INFO     | sufficient remaining disk space (497491640320 B)
[2025-06-05 04:11:50] 2025-06-05 01:36:08,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:11:50] 2025-06-05 01:36:08,261 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:11:50] 2025-06-05 01:36:08,261 | INFO     | update_server=False
[2025-06-05 04:11:50] 2025-06-05 01:36:08,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:11:50] 2025-06-05 01:36:08,265 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 04:11:50] 2025-06-05 01:36:08,266 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:11:50] 2025-06-05 01:36:08,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:11:50] 2025-06-05 01:36:08,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:11:50] 2025-06-05 01:36:08,450 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 04:11:50] 2025-06-05 01:36:08,451 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 04:11:50] 2025-06-05 01:36:08,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:11:50] 2025-06-05 01:36:08,451 | INFO     | will abort loop
[2025-06-05 04:11:50] 2025-06-05 01:36:08,942 | INFO     | all data control threads have been joined
[2025-06-05 04:11:50] 2025-06-05 01:36:09,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:11:50] 2025-06-05 01:36:09,242 | INFO     | all job control threads have been joined
[2025-06-05 04:11:50] 2025-06-05 01:36:09,267 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:09,456 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:09,467 | INFO     | all payload control threads have been joined
[2025-06-05 04:11:50] 2025-06-05 01:36:09,648 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:09,687 | INFO     | [job] validate thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:09,814 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:09,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:11:50] 2025-06-05 01:36:09,948 | INFO     | [data] control thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:09,973 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:10,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:11:50] 2025-06-05 01:36:10,026 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:10,248 | INFO     | [job] control thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:10,473 | INFO     | [payload] control thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:10,610 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:10,747 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:10,783 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:11,020 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:11,223 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:13,879 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:11:50] 2025-06-05 01:36:15,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166723573568)>', '<ExcThread(monitor, started 140165964089088)>']
[2025-06-05 04:11:50] 2025-06-05 01:36:15,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:11:50] 2025-06-05 01:36:15,309 | INFO     | [monitor] control thread has ended
[2025-06-05 04:11:50] 2025-06-05 01:36:20,308 | INFO     | all workflow threads have been joined
[2025-06-05 04:11:50] 2025-06-05 01:36:20,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:11:50] 2025-06-05 01:36:20,309 | INFO     | traces error code: 0
[2025-06-05 04:11:50] 2025-06-05 01:36:20,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:11:50] 2025-06-05 01:36:20,579 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:11:50] 2025-06-05 01:36:20,603 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:11:50] 2025-06-05 01:36:20,678 [wrapper] pilotpid: 7704
[2025-06-05 04:11:50] 2025-06-05 01:36:20,777 [wrapper] Pilot exit status: 0
[2025-06-05 04:11:50] 2025-06-05 01:36:21,237 [wrapper] pandaids: 6679567905
[2025-06-05 04:11:50] 2025-06-05 01:36:22,059 [wrapper] cleanup supervisor_pilot 17399 7705
[2025-06-05 04:11:50] 2025-06-05 01:36:22,104 [wrapper] Test setup, not cleaning
[2025-06-05 04:11:50] 2025-06-05 01:36:22,218 [wrapper] apfmon messages muted
[2025-06-05 04:11:50] 2025-06-05 01:36:22,273 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:11:50] 2025-06-05 01:36:22,341 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:11:50]  *** Error codes and diagnostics ***
[2025-06-05 04:11:50]     "exeErrorCode": 0,
[2025-06-05 04:11:50]     "exeErrorDiag": "",
[2025-06-05 04:11:50]     "pilotErrorCode": 0,
[2025-06-05 04:11:50]     "pilotErrorDiag": "",
[2025-06-05 04:11:50]  *** Listing of results directory ***
[2025-06-05 04:11:50] total 395336
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc    495897 Jun  4 11:04 pilot3.tar.gz
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc      5111 Jun  4 11:08 queuedata.json
[2025-06-05 04:11:50] -rwx------. 1 boinc boinc     37140 Jun  4 11:09 runpilot2-wrapper.sh
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc       100 Jun  5 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:11:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 00:06 run_atlas
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc       105 Jun  5 00:06 job.xml
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc      6392 Jun  5 00:06 init_data.xml
[2025-06-05 04:11:50] -rw-r--r--. 2 boinc boinc 216763449 Jun  5 00:06 EVNT.45006593._002098.pool.root.1
[2025-06-05 04:11:50] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:06 start_atlas.sh
[2025-06-05 04:11:50] drwxrwx--x. 2 boinc boinc        68 Jun  5 00:06 shared
[2025-06-05 04:11:50] -rw-r--r--. 2 boinc boinc    508880 Jun  5 00:06 input.tar.gz
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc         0 Jun  5 00:06 boinc_lockfile
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc      2525 Jun  5 00:06 pandaJob.out
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc    987032 Jun  5 00:07 agis_schedconf.cvmfs.json
[2025-06-05 04:11:50] drwx------. 4 boinc boinc      4096 Jun  5 00:07 pilot3
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc 181347306 Jun  5 03:33 HITS.45006595._056470.pool.root.1
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc       531 Jun  5 03:33 boinc_task_state.xml
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc      1014 Jun  5 03:34 memory_monitor_summary.json
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc   1598969 Jun  5 03:34 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc    369069 Jun  5 03:34 log.45006595._056470.job.log.tgz.1
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc        95 Jun  5 03:35 pilot_heartbeat.json
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc      7691 Jun  5 03:36 heartbeat.json
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc      4725 Jun  5 03:36 pilotlog.txt
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc   1078563 Jun  5 03:36 log.45006595._056470.job.log.1
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc       357 Jun  5 03:36 output.list
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc       620 Jun  5 03:36 runtime_log
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc   1464320 Jun  5 03:36 result.tar.gz
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc       657 Jun  5 03:36 Vi9MDmNJzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9wnKDmOblBPo.diag
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc      8659 Jun  5 03:36 runtime_log.err
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc      8192 Jun  5 04:11 boinc_mmap_file
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc        28 Jun  5 04:11 wrapper_checkpoint.txt
[2025-06-05 04:11:50] -rw-r--r--. 1 boinc boinc     20721 Jun  5 04:11 stderr.txt
[2025-06-05 04:11:50] HITS file was successfully produced:
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc 181347306 Jun  5 03:33 shared/HITS.pool.root.1
[2025-06-05 04:11:50]  *** Contents of shared directory: ***
[2025-06-05 04:11:50] total 390732
[2025-06-05 04:11:50] -rw-r--r--. 2 boinc boinc 216763449 Jun  5 00:06 ATLAS.root_0
[2025-06-05 04:11:50] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:06 start_atlas.sh
[2025-06-05 04:11:50] -rw-r--r--. 2 boinc boinc    508880 Jun  5 00:06 input.tar.gz
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc 181347306 Jun  5 03:33 HITS.pool.root.1
[2025-06-05 04:11:50] -rw-------. 1 boinc boinc   1464320 Jun  5 03:36 result.tar.gz
04:11:52 (31133): run_atlas exited; CPU time 46320.301052
04:11:52 (31133): called boinc_finish(0)

</stderr_txt>
]]>

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