Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:53:35 (3256770): wrapper (7.7.26015): starting
22:53:35 (3256770): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 22:53:35] Arguments: --nthreads 12
[2025-06-04 22:53:35] Threads: 12
[2025-06-04 22:53:35] Checking for CVMFS
[2025-06-04 22:53:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:53:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:53:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:53:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:53:37] 2.12.7.0 8883 8264 169324 146793 3 399 32944953 46080000 37852 130560 0 56753743 99.931 11822288 22307 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-04 22:53:37] CVMFS is ok
[2025-06-04 22:53:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:53:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:53:37] Further information can be found at the LHC@home message board.
[2025-06-04 22:53:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:53:37] Checking for apptainer binary...
[2025-06-04 22:53:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:53:37] Running /usr/bin/apptainer --version
[2025-06-04 22:53:37] apptainer version 1.4.1-1.el9
[2025-06-04 22:53:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:53:38] mff2102.farm.particle.cz
[2025-06-04 22:53:38] apptainer works
[2025-06-04 22:53:38] Set ATHENA_PROC_NUMBER=12
[2025-06-04 22:53:38] Set ATHENA_CORE_NUMBER=12
[2025-06-04 22:53:38] Starting ATLAS job with PandaID=6679470867
[2025-06-04 22:53:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:02:45]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:02:45] 2025-06-04 23:02:01,060 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6679470867/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:02:45] 2025-06-04 23:02:01,060 | INFO     | extracted standard info from prmon json
[2025-06-05 01:02:45] 2025-06-04 23:02:01,061 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:02:45] 2025-06-04 23:02:01,061 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:02:45] 2025-06-04 23:02:01,061 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:02:45] 2025-06-04 23:02:01,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:02:45] 2025-06-04 23:02:01,064 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:02:45] 2025-06-04 23:02:01,064 | INFO     | sum of square deviations: 549294020.0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,065 | INFO     | sum of deviations: 75156579269.99998
[2025-06-05 01:02:45] 2025-06-04 23:02:01,065 | INFO     | mean x: 1749074362.0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,065 | INFO     | mean y: 2448025.512396694
[2025-06-05 01:02:45] 2025-06-04 23:02:01,065 | INFO     | -- intersect: -239312820574.6767
[2025-06-05 01:02:45] 2025-06-04 23:02:01,065 | INFO     | intersect: -239312820574.6767
[2025-06-05 01:02:45] 2025-06-04 23:02:01,066 | INFO     | chi2: 7.819386122606845
[2025-06-05 01:02:45] 2025-06-04 23:02:01,066 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,066 | INFO     | sum of deviations: 80220988461.50005
[2025-06-05 01:02:45] 2025-06-04 23:02:01,066 | INFO     | mean x: 1749074209.5
[2025-06-05 01:02:45] 2025-06-04 23:02:01,067 | INFO     | mean y: 2459148.1637931033
[2025-06-05 01:02:45] 2025-06-04 23:02:01,067 | INFO     | -- intersect: -289916174817.48376
[2025-06-05 01:02:45] 2025-06-04 23:02:01,067 | INFO     | intersect: -289916174817.48376
[2025-06-05 01:02:45] 2025-06-04 23:02:01,067 | INFO     | chi2: 7.0169079269390835
[2025-06-05 01:02:45] 2025-06-04 23:02:01,067 | INFO     | current chi2=7.0169079269390835 (change=10.262675139518878 %)
[2025-06-05 01:02:45] 2025-06-04 23:02:01,067 | INFO     | right removable region: 115
[2025-06-05 01:02:45] 2025-06-04 23:02:01,067 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,068 | INFO     | sum of deviations: 33344907782.500004
[2025-06-05 01:02:45] 2025-06-04 23:02:01,068 | INFO     | mean x: 1749074514.5
[2025-06-05 01:02:45] 2025-06-04 23:02:01,068 | INFO     | mean y: 2545540.3879310344
[2025-06-05 01:02:45] 2025-06-04 23:02:01,068 | INFO     | -- intersect: -120505964578.73535
[2025-06-05 01:02:45] 2025-06-04 23:02:01,068 | INFO     | intersect: -120505964578.73535
[2025-06-05 01:02:45] 2025-06-04 23:02:01,068 | INFO     | chi2: 2.877881590332742
[2025-06-05 01:02:45] 2025-06-04 23:02:01,068 | INFO     | current chi2=2.877881590332742 (change=63.19555595275672 %)
[2025-06-05 01:02:45] 2025-06-04 23:02:01,069 | INFO     | sum of square deviations: 424045160.0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,069 | INFO     | sum of deviations: 7881214456.999996
[2025-06-05 01:02:45] 2025-06-04 23:02:01,069 | INFO     | mean x: 1749074667.0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,069 | INFO     | mean y: 2609912.5945945946
[2025-06-05 01:02:45] 2025-06-04 23:02:01,069 | INFO     | -- intersect: -32505325213.77934
[2025-06-05 01:02:45] 2025-06-04 23:02:01,069 | INFO     | intersect: -32505325213.77934
[2025-06-05 01:02:45] 2025-06-04 23:02:01,069 | INFO     | chi2: 1.1794620840640702
[2025-06-05 01:02:45] 2025-06-04 23:02:01,070 | INFO     | current chi2=1.1794620840640702 (change=59.01630949563494 %)
[2025-06-05 01:02:45] 2025-06-04 23:02:01,070 | INFO     | sum of square deviations: 369281342.5
[2025-06-05 01:02:45] 2025-06-04 23:02:01,070 | INFO     | sum of deviations: -1848766985.499999
[2025-06-05 01:02:45] 2025-06-04 23:02:01,070 | INFO     | mean x: 1749074819.5
[2025-06-05 01:02:45] 2025-06-04 23:02:01,070 | INFO     | mean y: 2636862.4811320757
[2025-06-05 01:02:45] 2025-06-04 23:02:01,071 | INFO     | -- intersect: 8759190225.20882
[2025-06-05 01:02:45] 2025-06-04 23:02:01,071 | INFO     | intersect: 8759190225.20882
[2025-06-05 01:02:45] 2025-06-04 23:02:01,071 | INFO     | chi2: 0.9525389573819957
[2025-06-05 01:02:45] 2025-06-04 23:02:01,071 | INFO     | current chi2=0.9525389573819957 (change=19.2395440046844 %)
[2025-06-05 01:02:45] 2025-06-04 23:02:01,071 | INFO     | left removable region: 30
[2025-06-05 01:02:45] 2025-06-04 23:02:01,071 | INFO     | sum of square deviations: 190403570.0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,071 | INFO     | sum of deviations: 1145579389.9999998
[2025-06-05 01:02:45] 2025-06-04 23:02:01,072 | INFO     | mean x: 1749075094.0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,072 | INFO     | mean y: 2674351.9176470586
[2025-06-05 01:02:45] 2025-06-04 23:02:01,072 | INFO     | -- intersect: -10520785787.2421
[2025-06-05 01:02:45] 2025-06-04 23:02:01,072 | INFO     | intersect: -10520785787.2421
[2025-06-05 01:02:45] 2025-06-04 23:02:01,072 | INFO     | chi2: 0.0003021004278216007
[2025-06-05 01:02:45] 2025-06-04 23:02:01,072 | INFO     | -- intersect: -10520785787.2421
[2025-06-05 01:02:45] 2025-06-04 23:02:01,072 | INFO     | current memory leak: 6.02 B/s (using 85 data points, chi2=0.00)
[2025-06-05 01:02:45] 2025-06-04 23:02:01,073 | INFO     | ..............................
[2025-06-05 01:02:45] 2025-06-04 23:02:01,073 | INFO     | . Timing measurements:
[2025-06-05 01:02:45] 2025-06-04 23:02:01,073 | INFO     | . get job = 0 s
[2025-06-05 01:02:45] 2025-06-04 23:02:01,073 | INFO     | . initial setup = 6 s
[2025-06-05 01:02:45] 2025-06-04 23:02:01,073 | INFO     | . payload setup = 75 s
[2025-06-05 01:02:45] 2025-06-04 23:02:01,073 | INFO     | . stage-in = 0 s
[2025-06-05 01:02:45] 2025-06-04 23:02:01,073 | INFO     | . payload execution = 7407 s
[2025-06-05 01:02:45] 2025-06-04 23:02:01,073 | INFO     | . stage-out = 1 s
[2025-06-05 01:02:45] 2025-06-04 23:02:01,073 | INFO     | . log creation = 0 s
[2025-06-05 01:02:45] 2025-06-04 23:02:01,073 | INFO     | ..............................
[2025-06-05 01:02:45] 2025-06-04 23:02:01,252 | INFO     | 
[2025-06-05 01:02:45] 2025-06-04 23:02:01,253 | INFO     | job summary report
[2025-06-05 01:02:45] 2025-06-04 23:02:01,253 | INFO     | --------------------------------------------------
[2025-06-05 01:02:45] 2025-06-04 23:02:01,253 | INFO     | PanDA job id: 6679470867
[2025-06-05 01:02:45] 2025-06-04 23:02:01,253 | INFO     | task id: 45006595
[2025-06-05 01:02:45] 2025-06-04 23:02:01,253 | INFO     | errors: (none)
[2025-06-05 01:02:45] 2025-06-04 23:02:01,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:02:45] 2025-06-04 23:02:01,253 | INFO     | pilot state: finished 
[2025-06-05 01:02:45] 2025-06-04 23:02:01,253 | INFO     | transexitcode: 0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,253 | INFO     | exeerrorcode: 0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,253 | INFO     | exeerrordiag: 
[2025-06-05 01:02:45] 2025-06-04 23:02:01,253 | INFO     | exitcode: 0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | exitmsg: OK
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | cpuconsumptiontime: 35449 s
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | nevents: 400
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | neventsw: 0
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | pid: 3303834
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | pgrp: 3303834
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | corecount: 12
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | event service: False
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | sizes: {0: 2397114, 1: 2397313, 12: 2397313, 23: 2397341, 33: 2397369, 41: 2397631, 44: 2397787, 7486: 2425238, 7489: 2434181, 7492: 2434237, 7535: 2434407}
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | --------------------------------------------------
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | 
[2025-06-05 01:02:45] 2025-06-04 23:02:01,254 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2025-06-05 01:02:45] 2025-06-04 23:02:01,443 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,443 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,443 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,445 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:02:45] 2025-06-04 23:02:01,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,445 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:02:45] 2025-06-04 23:02:01,445 | INFO     | job 6679470867 has completed (purged errors)
[2025-06-05 01:02:45] 2025-06-04 23:02:01,445 | INFO     | overall cleanup function is called
[2025-06-05 01:02:45] 2025-06-04 23:02:02,460 | INFO     | --- collectZombieJob: --- 10, [3303834]
[2025-06-05 01:02:45] 2025-06-04 23:02:02,460 | INFO     | zombie collector waiting for pid 3303834
[2025-06-05 01:02:45] 2025-06-04 23:02:02,460 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:02:45] 2025-06-04 23:02:02,460 | INFO     | collected zombie processes
[2025-06-05 01:02:45] 2025-06-04 23:02:02,460 | INFO     | will attempt to kill all subprocesses of pid=3303834
[2025-06-05 01:02:45] 2025-06-04 23:02:03,563 | INFO     | process IDs to be killed: [3303834] (in reverse order)
[2025-06-05 01:02:45] 2025-06-04 23:02:04,245 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:02:45] 2025-06-04 23:02:04,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:02:45] 2025-06-04 23:02:04,290 | INFO     | did not find any defunct processes belonging to 3303834
[2025-06-05 01:02:45] 2025-06-04 23:02:04,341 | INFO     | did not find any defunct processes belonging to 3303834
[2025-06-05 01:02:45] 2025-06-04 23:02:04,342 | INFO     | ready for new job
[2025-06-05 01:02:45] 2025-06-04 23:02:04,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:02:45] 2025-06-04 23:02:04,344 | INFO     | **************************************
[2025-06-05 01:02:45] 2025-06-04 23:02:04,344 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:02:45] 2025-06-04 23:02:04,344 | INFO     | **************************************
[2025-06-05 01:02:45] 2025-06-04 23:02:04,344 | INFO     | 
[2025-06-05 01:02:45] 2025-06-04 23:02:04,351 | INFO     | architecture information:
[2025-06-05 01:02:45] 2025-06-04 23:02:04,356 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:02:45] 2025-06-04 23:02:04,458 | INFO     | cat /etc/os-release:
[2025-06-05 01:02:45] NAME="CentOS Linux"
[2025-06-05 01:02:45] VERSION="7 (Core)"
[2025-06-05 01:02:45] ID="centos"
[2025-06-05 01:02:45] ID_LIKE="rhel fedora"
[2025-06-05 01:02:45] VERSION_ID="7"
[2025-06-05 01:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:02:45] ANSI_COLOR="0;31"
[2025-06-05 01:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:02:45] HOME_URL="https://www.centos.org/"
[2025-06-05 01:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:02:45] 
[2025-06-05 01:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:02:45] 
[2025-06-05 01:02:45] 2025-06-04 23:02:04,459 | INFO     | **************************************
[2025-06-05 01:02:45] 2025-06-04 23:02:04,962 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2025-06-05 01:02:45] 2025-06-04 23:02:05,077 | INFO     | sufficient remaining disk space (1658425704448 B)
[2025-06-05 01:02:45] 2025-06-04 23:02:05,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:02:45] 2025-06-04 23:02:05,078 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:02:45] 2025-06-04 23:02:05,078 | INFO     | update_server=False
[2025-06-05 01:02:45] 2025-06-04 23:02:05,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:02:45] 2025-06-04 23:02:05,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:02:45] 2025-06-04 23:02:05,082 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:02:45] 2025-06-04 23:02:05,082 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:02:45] 2025-06-04 23:02:05,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:02:45] 2025-06-04 23:02:05,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:02:45] 2025-06-04 23:02:05,545 | INFO     | all payload control threads have been joined
[2025-06-05 01:02:45] 2025-06-04 23:02:05,587 | INFO     | all data control threads have been joined
[2025-06-05 01:02:45] 2025-06-04 23:02:05,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:02:45] 2025-06-04 23:02:05,906 | INFO     | aborting loop
[2025-06-05 01:02:45] 2025-06-04 23:02:06,083 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:06,212 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:06,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:02:45] 2025-06-04 23:02:06,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:02:45] 2025-06-04 23:02:06,539 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:06,551 | INFO     | [payload] control thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:06,593 | INFO     | [data] control thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:06,690 | INFO     | [job] validate thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:06,787 | INFO     | all job control threads have been joined
[2025-06-05 01:02:45] 2025-06-04 23:02:06,822 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:06,878 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:06,878 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:06,917 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:07,126 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:07,275 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:07,347 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:07,793 | INFO     | [job] control thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:08,291 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:09,090 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:02:45] 2025-06-04 23:02:09,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459880421184)>', '<ExcThread(monitor, started 140459246610176)>']
[2025-06-05 01:02:45] 2025-06-04 23:02:10,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:02:45] 2025-06-04 23:02:10,113 | INFO     | [monitor] control thread has ended
[2025-06-05 01:02:45] 2025-06-04 23:02:14,387 | INFO     | all workflow threads have been joined
[2025-06-05 01:02:45] 2025-06-04 23:02:14,387 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:02:45] 2025-06-04 23:02:14,387 | INFO     | traces error code: 0
[2025-06-05 01:02:45] 2025-06-04 23:02:14,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:02:45] 2025-06-04 23:02:14,714 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:02:45] 2025-06-04 23:02:14,756 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:02:45] 2025-06-04 23:02:14,808 [wrapper] pilotpid: 3276173
[2025-06-05 01:02:45] 2025-06-04 23:02:14,835 [wrapper] Pilot exit status: 0
[2025-06-05 01:02:45] 2025-06-04 23:02:14,987 [wrapper] pandaids: 6679470867
[2025-06-05 01:02:45] 2025-06-04 23:02:15,494 [wrapper] cleanup supervisor_pilot  148114 3276174
[2025-06-05 01:02:45] 2025-06-04 23:02:15,535 [wrapper] Test setup, not cleaning
[2025-06-05 01:02:45] 2025-06-04 23:02:15,560 [wrapper] apfmon messages muted
[2025-06-05 01:02:45] 2025-06-04 23:02:15,587 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:02:45] 2025-06-04 23:02:15,613 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:02:45]  *** Error codes and diagnostics ***
[2025-06-05 01:02:45]     "exeErrorCode": 0,
[2025-06-05 01:02:45]     "exeErrorDiag": "",
[2025-06-05 01:02:45]     "pilotErrorCode": 0,
[2025-06-05 01:02:45]     "pilotErrorDiag": "",
[2025-06-05 01:02:45]  *** Listing of results directory ***
[2025-06-05 01:02:45] total 391804
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc    495897 Jun  4 11:04 pilot3.tar.gz
[2025-06-05 01:02:45] -rwx------ 1 boinc boinc     37140 Jun  4 11:06 runpilot2-wrapper.sh
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc      5111 Jun  4 11:06 queuedata.json
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:02:45] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:53 run_atlas
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:53 job.xml
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc      6664 Jun  4 22:53 init_data.xml
[2025-06-05 01:02:45] -rw-r--r-- 2 boinc boinc 213320573 Jun  4 22:53 EVNT.45006593._000976.pool.root.1
[2025-06-05 01:02:45] -rw-r--r-- 2 boinc boinc    508879 Jun  4 22:53 input.tar.gz
[2025-06-05 01:02:45] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:53 start_atlas.sh
[2025-06-05 01:02:45] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:53 shared
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:53 boinc_lockfile
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc      2521 Jun  4 22:53 pandaJob.out
[2025-06-05 01:02:45] -rw------- 1 boinc boinc    987032 Jun  4 22:54 agis_schedconf.cvmfs.json
[2025-06-05 01:02:45] -rw------- 1 boinc boinc   1598969 Jun  4 22:55 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:02:45] drwx------ 4 boinc boinc      4096 Jun  4 22:55 pilot3
[2025-06-05 01:02:45] -rw------- 1 boinc boinc 181940576 Jun  5 01:00 HITS.45006595._056360.pool.root.1
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc       529 Jun  5 01:00 boinc_task_state.xml
[2025-06-05 01:02:45] -rw------- 1 boinc boinc      1025 Jun  5 01:01 memory_monitor_summary.json
[2025-06-05 01:02:45] -rw------- 1 boinc boinc    375331 Jun  5 01:01 log.45006595._056360.job.log.tgz.1
[2025-06-05 01:02:45] -rw------- 1 boinc boinc        95 Jun  5 01:01 pilot_heartbeat.json
[2025-06-05 01:02:45] -rw------- 1 boinc boinc      7690 Jun  5 01:02 heartbeat.json
[2025-06-05 01:02:45] -rw------- 1 boinc boinc      4479 Jun  5 01:02 pilotlog.txt
[2025-06-05 01:02:45] -rw------- 1 boinc boinc    676661 Jun  5 01:02 log.45006595._056360.job.log.1
[2025-06-05 01:02:45] -rw------- 1 boinc boinc       357 Jun  5 01:02 output.list
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:02 runtime_log
[2025-06-05 01:02:45] -rw------- 1 boinc boinc   1075200 Jun  5 01:02 result.tar.gz
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc      8720 Jun  5 01:02 runtime_log.err
[2025-06-05 01:02:45] -rw------- 1 boinc boinc       663 Jun  5 01:02 LQ1MDmPGzg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmV1aKDmZFxcTo.diag
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc        26 Jun  5 01:02 wrapper_checkpoint.txt
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:02 boinc_mmap_file
[2025-06-05 01:02:45] -rw-r--r-- 1 boinc boinc     20928 Jun  5 01:02 stderr.txt
[2025-06-05 01:02:45] HITS file was successfully produced:
[2025-06-05 01:02:45] -rw------- 1 boinc boinc 181940576 Jun  5 01:00 shared/HITS.pool.root.1
[2025-06-05 01:02:45]  *** Contents of shared directory: ***
[2025-06-05 01:02:45] total 387580
[2025-06-05 01:02:45] -rw-r--r-- 2 boinc boinc 213320573 Jun  4 22:53 ATLAS.root_0
[2025-06-05 01:02:45] -rw-r--r-- 2 boinc boinc    508879 Jun  4 22:53 input.tar.gz
[2025-06-05 01:02:45] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:53 start_atlas.sh
[2025-06-05 01:02:45] -rw------- 1 boinc boinc 181940576 Jun  5 01:00 HITS.pool.root.1
[2025-06-05 01:02:45] -rw------- 1 boinc boinc   1075200 Jun  5 01:02 result.tar.gz
01:02:46 (3256770): run_atlas exited; CPU time 35900.812766
01:02:46 (3256770): called boinc_finish(0)

</stderr_txt>
]]>

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