Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:39:14 (3253447): wrapper (7.7.26015): starting
03:39:14 (3253447): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 03:39:14] Arguments: --nthreads 4
[2025-06-06 03:39:14] Threads: 4
[2025-06-06 03:39:14] Checking for CVMFS
[2025-06-06 03:39:14] No cvmfs_config command found, will try listing directly
[2025-06-06 03:39:14] CVMFS is ok
[2025-06-06 03:39:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:39:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 03:39:14] Further information can be found at the LHC@home message board.
[2025-06-06 03:39:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:39:14] Checking for apptainer binary...
[2025-06-06 03:39:14] which: no apptainer in ((null))
[2025-06-06 03:39:14] apptainer is not installed, using version from CVMFS
[2025-06-06 03:39:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:39:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-06-06 03:39:14] apptainer works
[2025-06-06 03:39:14] Set ATHENA_PROC_NUMBER=4
[2025-06-06 03:39:14] Set ATHENA_CORE_NUMBER=4
[2025-06-06 03:39:14] Starting ATLAS job with PandaID=6678312553
[2025-06-06 03:39:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:53:17]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:53:17] 2025-06-06 03:52:59,726 | INFO     | total number of processed events: 400 (read)
[2025-06-06 05:53:17] 2025-06-06 03:52:59,729 | INFO     | executing command: lscpu
[2025-06-06 05:53:17] 2025-06-06 03:52:59,787 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 05:53:17] 2025-06-06 03:53:00,794 | INFO     | monitor loop #590: job 0:6678312553 is in state 'finished'
[2025-06-06 05:53:17] 2025-06-06 03:53:00,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:53:17] 2025-06-06 03:53:03,297 | INFO     | monitor loop #591: job 0:6678312553 is in state 'finished'
[2025-06-06 05:53:17] 2025-06-06 03:53:03,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:53:17] 2025-06-06 03:53:03,687 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 05:53:17] 2025-06-06 03:53:03,687 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6678312553/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:53:17] 2025-06-06 03:53:03,688 | INFO     | extracted standard info from prmon json
[2025-06-06 05:53:17] 2025-06-06 03:53:03,688 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:53:17] 2025-06-06 03:53:03,688 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:53:17] 2025-06-06 03:53:03,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:53:17] 2025-06-06 03:53:03,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:53:17] 2025-06-06 03:53:03,690 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:53:17] 2025-06-06 03:53:03,691 | INFO     | sum of square deviations: 697054930.0
[2025-06-06 05:53:17] 2025-06-06 03:53:03,691 | INFO     | sum of deviations: 6922216560.0
[2025-06-06 05:53:17] 2025-06-06 03:53:03,691 | INFO     | mean x: 1749177959.0
[2025-06-06 05:53:17] 2025-06-06 03:53:03,691 | INFO     | mean y: 2326052.8778625955
[2025-06-06 05:53:17] 2025-06-06 03:53:03,691 | INFO     | -- intersect: -17368168169.402157
[2025-06-06 05:53:17] 2025-06-06 03:53:03,691 | INFO     | intersect: -17368168169.402157
[2025-06-06 05:53:17] 2025-06-06 03:53:03,691 | INFO     | chi2: 1.5467568842559047
[2025-06-06 05:53:17] 2025-06-06 03:53:03,692 | INFO     | sum of square deviations: 620244187.5
[2025-06-06 05:53:17] 2025-06-06 03:53:03,692 | INFO     | sum of deviations: 6736088236.0
[2025-06-06 05:53:17] 2025-06-06 03:53:03,692 | INFO     | mean x: 1749177806.5
[2025-06-06 05:53:17] 2025-06-06 03:53:03,692 | INFO     | mean y: 2325683.1587301586
[2025-06-06 05:53:17] 2025-06-06 03:53:03,692 | INFO     | -- intersect: -18994411863.91733
[2025-06-06 05:53:17] 2025-06-06 03:53:03,692 | INFO     | intersect: -18994411863.91733
[2025-06-06 05:53:17] 2025-06-06 03:53:03,692 | INFO     | chi2: 1.5488052780539705
[2025-06-06 05:53:17] 2025-06-06 03:53:03,692 | INFO     | current chi2=1.5488052780539705 (change=-0.13243152940943131 %)
[2025-06-06 05:53:17] 2025-06-06 03:53:03,692 | INFO     | right removable region: 125
[2025-06-06 05:53:17] 2025-06-06 03:53:03,692 | INFO     | sum of square deviations: 620244187.5
[2025-06-06 05:53:17] 2025-06-06 03:53:03,693 | INFO     | sum of deviations: -11042786934.0
[2025-06-06 05:53:17] 2025-06-06 03:53:03,693 | INFO     | mean x: 1749178111.5
[2025-06-06 05:53:17] 2025-06-06 03:53:03,693 | INFO     | mean y: 2361047.714285714
[2025-06-06 05:53:17] 2025-06-06 03:53:03,693 | INFO     | -- intersect: 31144613702.69946
[2025-06-06 05:53:17] 2025-06-06 03:53:03,693 | INFO     | intersect: 31144613702.69946
[2025-06-06 05:53:17] 2025-06-06 03:53:03,693 | INFO     | chi2: 0.07206181490785038
[2025-06-06 05:53:17] 2025-06-06 03:53:03,693 | INFO     | current chi2=0.07206181490785038 (change=95.3411026877364 %)
[2025-06-06 05:53:17] 2025-06-06 03:53:03,693 | INFO     | sum of square deviations: 549294020.0
[2025-06-06 05:53:17] 2025-06-06 03:53:03,694 | INFO     | sum of deviations: -10483178240.999998
[2025-06-06 05:53:17] 2025-06-06 03:53:03,694 | INFO     | mean x: 1749178264.0
[2025-06-06 05:53:17] 2025-06-06 03:53:03,694 | INFO     | mean y: 2359797.3636363638
[2025-06-06 05:53:17] 2025-06-06 03:53:03,694 | INFO     | -- intersect: 33385114477.26157
[2025-06-06 05:53:17] 2025-06-06 03:53:03,694 | INFO     | intersect: 33385114477.26157
[2025-06-06 05:53:17] 2025-06-06 03:53:03,694 | INFO     | chi2: 0.06768163151144904
[2025-06-06 05:53:17] 2025-06-06 03:53:03,694 | INFO     | current chi2=0.06768163151144904 (change=6.078369524834383 %)
[2025-06-06 05:53:17] 2025-06-06 03:53:03,694 | INFO     | left removable region: 20
[2025-06-06 05:53:17] 2025-06-06 03:53:03,694 | INFO     | sum of square deviations: 358927660.0
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | sum of deviations: -5255979294.999999
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | mean x: 1749178386.0
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | mean y: 2348299.3333333335
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | -- intersect: 25616549723.869728
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | intersect: 25616549723.869728
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | chi2: 0.0545411675050384
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | -- intersect: 25616549723.869728
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | current memory leak: -14.64 B/s (using 105 data points, chi2=0.05)
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | ..............................
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | . Timing measurements:
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | . get job = 0 s
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | . initial setup = 1 s
[2025-06-06 05:53:17] 2025-06-06 03:53:03,695 | INFO     | . payload setup = 7 s
[2025-06-06 05:53:17] 2025-06-06 03:53:03,696 | INFO     | . stage-in = 0 s
[2025-06-06 05:53:17] 2025-06-06 03:53:03,696 | INFO     | . payload execution = 7984 s
[2025-06-06 05:53:17] 2025-06-06 03:53:03,696 | INFO     | . stage-out = 0 s
[2025-06-06 05:53:17] 2025-06-06 03:53:03,696 | INFO     | . log creation = 0 s
[2025-06-06 05:53:17] 2025-06-06 03:53:03,696 | INFO     | ..............................
[2025-06-06 05:53:17] 2025-06-06 03:53:04,052 | INFO     | 
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | job summary report
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | --------------------------------------------------
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | PanDA job id: 6678312553
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | task id: 45006595
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | errors: (none)
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | pilot state: finished 
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | transexitcode: 0
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | exeerrorcode: 0
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | exeerrordiag: 
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | exitcode: 0
[2025-06-06 05:53:17] 2025-06-06 03:53:04,053 | INFO     | exitmsg: OK
[2025-06-06 05:53:17] 2025-06-06 03:53:04,054 | INFO     | cpuconsumptiontime: 29990 s
[2025-06-06 05:53:17] 2025-06-06 03:53:04,054 | INFO     | nevents: 400
[2025-06-06 05:53:17] 2025-06-06 03:53:04,054 | INFO     | neventsw: 0
[2025-06-06 05:53:17] 2025-06-06 03:53:04,054 | INFO     | pid: 3264801
[2025-06-06 05:53:17] 2025-06-06 03:53:04,054 | INFO     | pgrp: 3264801
[2025-06-06 05:53:17] 2025-06-06 03:53:04,054 | INFO     | corecount: 4
[2025-06-06 05:53:17] 2025-06-06 03:53:04,054 | INFO     | event service: False
[2025-06-06 05:53:17] 2025-06-06 03:53:04,054 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 11: 2397643, 7995: 2425128, 7998: 2434275, 8002: 2434389}
[2025-06-06 05:53:17] 2025-06-06 03:53:04,054 | INFO     | --------------------------------------------------
[2025-06-06 05:53:17] 2025-06-06 03:53:04,054 | INFO     | 
[2025-06-06 05:53:17] 2025-06-06 03:53:04,054 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-06-06 05:53:17] 2025-06-06 03:53:04,071 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,072 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,074 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:53:17] 2025-06-06 03:53:04,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,074 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:53:17] 2025-06-06 03:53:04,074 | INFO     | job 6678312553 has completed (purged errors)
[2025-06-06 05:53:17] 2025-06-06 03:53:04,074 | INFO     | overall cleanup function is called
[2025-06-06 05:53:17] 2025-06-06 03:53:05,082 | INFO     | --- collectZombieJob: --- 10, [3264801]
[2025-06-06 05:53:17] 2025-06-06 03:53:05,082 | INFO     | zombie collector waiting for pid 3264801
[2025-06-06 05:53:17] 2025-06-06 03:53:05,082 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:53:17] 2025-06-06 03:53:05,082 | INFO     | collected zombie processes
[2025-06-06 05:53:17] 2025-06-06 03:53:05,082 | INFO     | will attempt to kill all subprocesses of pid=3264801
[2025-06-06 05:53:17] 2025-06-06 03:53:05,421 | INFO     | process IDs to be killed: [3264801] (in reverse order)
[2025-06-06 05:53:17] 2025-06-06 03:53:05,517 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:53:17] 2025-06-06 03:53:05,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:53:17] 2025-06-06 03:53:05,528 | INFO     | did not find any defunct processes belonging to 3264801
[2025-06-06 05:53:17] 2025-06-06 03:53:05,538 | INFO     | did not find any defunct processes belonging to 3264801
[2025-06-06 05:53:17] 2025-06-06 03:53:05,538 | INFO     | ready for new job
[2025-06-06 05:53:17] 2025-06-06 03:53:05,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:53:17] 2025-06-06 03:53:05,540 | INFO     | **************************************
[2025-06-06 05:53:17] 2025-06-06 03:53:05,540 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:53:17] 2025-06-06 03:53:05,540 | INFO     | **************************************
[2025-06-06 05:53:17] 2025-06-06 03:53:05,540 | INFO     | 
[2025-06-06 05:53:17] 2025-06-06 03:53:05,544 | INFO     | architecture information:
[2025-06-06 05:53:17] 2025-06-06 03:53:05,544 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:53:17] 2025-06-06 03:53:05,557 | INFO     | cat /etc/os-release:
[2025-06-06 05:53:17] NAME="CentOS Linux"
[2025-06-06 05:53:17] VERSION="7 (Core)"
[2025-06-06 05:53:17] ID="centos"
[2025-06-06 05:53:17] ID_LIKE="rhel fedora"
[2025-06-06 05:53:17] VERSION_ID="7"
[2025-06-06 05:53:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:53:17] ANSI_COLOR="0;31"
[2025-06-06 05:53:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:53:17] HOME_URL="https://www.centos.org/"
[2025-06-06 05:53:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:53:17] 
[2025-06-06 05:53:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:53:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:53:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:53:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:53:17] 
[2025-06-06 05:53:17] 2025-06-06 03:53:05,558 | INFO     | **************************************
[2025-06-06 05:53:17] 2025-06-06 03:53:06,061 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-06-06 05:53:17] 2025-06-06 03:53:06,075 | INFO     | sufficient remaining disk space (635831320576 B)
[2025-06-06 05:53:17] 2025-06-06 03:53:06,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:53:17] 2025-06-06 03:53:06,075 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:53:17] 2025-06-06 03:53:06,075 | INFO     | update_server=False
[2025-06-06 05:53:17] 2025-06-06 03:53:06,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:53:17] 2025-06-06 03:53:06,076 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 05:53:17] 2025-06-06 03:53:06,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:53:17] 2025-06-06 03:53:06,076 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:53:17] 2025-06-06 03:53:06,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:53:17] 2025-06-06 03:53:06,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:53:17] 2025-06-06 03:53:06,507 | INFO     | all payload control threads have been joined
[2025-06-06 05:53:17] 2025-06-06 03:53:06,517 | INFO     | all data control threads have been joined
[2025-06-06 05:53:17] 2025-06-06 03:53:06,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:53:17] 2025-06-06 03:53:06,805 | INFO     | aborting loop
[2025-06-06 05:53:17] 2025-06-06 03:53:07,081 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:07,242 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:07,347 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:07,415 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:53:17] 2025-06-06 03:53:07,513 | INFO     | [payload] control thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:07,523 | INFO     | [data] control thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:07,532 | INFO     | all job control threads have been joined
[2025-06-06 05:53:17] 2025-06-06 03:53:07,810 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:07,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:07,952 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:08,250 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:08,502 | INFO     | [job] validate thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:08,505 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:08,515 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:08,538 | INFO     | [job] control thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:08,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:53:17] 2025-06-06 03:53:09,420 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:09,764 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:10,082 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:53:17] 2025-06-06 03:53:11,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23324923574080)>', '<ExcThread(monitor, started 23324612597504)>']
[2025-06-06 05:53:17] 2025-06-06 03:53:12,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:53:17] 2025-06-06 03:53:12,103 | INFO     | [monitor] control thread has ended
[2025-06-06 05:53:17] 2025-06-06 03:53:16,773 | INFO     | all workflow threads have been joined
[2025-06-06 05:53:17] 2025-06-06 03:53:16,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:53:17] 2025-06-06 03:53:16,773 | INFO     | traces error code: 0
[2025-06-06 05:53:17] 2025-06-06 03:53:16,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:53:17] 2025-06-06 03:53:16,899 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:53:17] 2025-06-06 03:53:16,902 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:53:17] 2025-06-06 03:53:16,905 [wrapper] pilotpid: 3257463
[2025-06-06 05:53:17] 2025-06-06 03:53:16,908 [wrapper] Pilot exit status: 0
[2025-06-06 05:53:17] 2025-06-06 03:53:16,918 [wrapper] pandaids: 6678312553
[2025-06-06 05:53:17] 2025-06-06 03:53:16,981 [wrapper] cleanup supervisor_pilot 3432671 3257464
[2025-06-06 05:53:17] 2025-06-06 03:53:16,984 [wrapper] Test setup, not cleaning
[2025-06-06 05:53:17] 2025-06-06 03:53:16,987 [wrapper] apfmon messages muted
[2025-06-06 05:53:17] 2025-06-06 03:53:16,990 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:53:17] 2025-06-06 03:53:16,992 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:53:17]  *** Error codes and diagnostics ***
[2025-06-06 05:53:17]     "exeErrorCode": 0,
[2025-06-06 05:53:17]     "exeErrorDiag": "",
[2025-06-06 05:53:17]     "pilotErrorCode": 0,
[2025-06-06 05:53:17]     "pilotErrorDiag": "",
[2025-06-06 05:53:17]  *** Listing of results directory ***
[2025-06-06 05:53:17] total 394204
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:12 queuedata.json
[2025-06-06 05:53:17] -rwx------ 1 boinc boinc     37140 Jun  4 06:12 runpilot2-wrapper.sh
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc       100 Jun  6 03:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:53:17] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:39 run_atlas
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc       105 Jun  6 03:39 job.xml
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc      6636 Jun  6 03:39 init_data.xml
[2025-06-06 05:53:17] -rw-r--r-- 2 boinc boinc 217415830 Jun  6 03:39 EVNT.45006593._002082.pool.root.1
[2025-06-06 05:53:17] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:39 start_atlas.sh
[2025-06-06 05:53:17] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:39 shared
[2025-06-06 05:53:17] -rw-r--r-- 2 boinc boinc    508882 Jun  6 03:39 input.tar.gz
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc         0 Jun  6 03:39 boinc_lockfile
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc      2525 Jun  6 03:39 pandaJob.out
[2025-06-06 05:53:17] -rw------- 1 boinc boinc    987721 Jun  6 03:39 agis_schedconf.cvmfs.json
[2025-06-06 05:53:17] -rw------- 1 boinc boinc   1598969 Jun  6 03:39 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:53:17] drwx------ 4 boinc boinc      4096 Jun  6 03:39 pilot3
[2025-06-06 05:53:17] -rw------- 1 boinc boinc        95 Jun  6 05:52 pilot_heartbeat.json
[2025-06-06 05:53:17] -rw------- 1 boinc boinc 180298475 Jun  6 05:52 HITS.45006595._051999.pool.root.1
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc       528 Jun  6 05:52 boinc_task_state.xml
[2025-06-06 05:53:17] -rw------- 1 boinc boinc      1033 Jun  6 05:52 memory_monitor_summary.json
[2025-06-06 05:53:17] -rw------- 1 boinc boinc    289105 Jun  6 05:52 log.45006595._051999.job.log.tgz.1
[2025-06-06 05:53:17] -rw------- 1 boinc boinc      7724 Jun  6 05:53 heartbeat.json
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc      8192 Jun  6 05:53 boinc_mmap_file
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc        26 Jun  6 05:53 wrapper_checkpoint.txt
[2025-06-06 05:53:17] -rw------- 1 boinc boinc      4486 Jun  6 05:53 pilotlog.txt
[2025-06-06 05:53:17] -rw------- 1 boinc boinc    764592 Jun  6 05:53 log.45006595._051999.job.log.1
[2025-06-06 05:53:17] -rw------- 1 boinc boinc       357 Jun  6 05:53 output.list
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc       620 Jun  6 05:53 runtime_log
[2025-06-06 05:53:17] -rw------- 1 boinc boinc   1075200 Jun  6 05:53 result.tar.gz
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc      9025 Jun  6 05:53 runtime_log.err
[2025-06-06 05:53:17] -rw------- 1 boinc boinc       663 Jun  6 05:53 0KpLDmxfug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD9mKDmrNXuon.diag
[2025-06-06 05:53:17] -rw-r--r-- 1 boinc boinc     20908 Jun  6 05:53 stderr.txt
[2025-06-06 05:53:17] HITS file was successfully produced:
[2025-06-06 05:53:17] -rw------- 1 boinc boinc 180298475 Jun  6 05:52 shared/HITS.pool.root.1
[2025-06-06 05:53:17]  *** Contents of shared directory: ***
[2025-06-06 05:53:17] total 389976
[2025-06-06 05:53:17] -rw-r--r-- 2 boinc boinc 217415830 Jun  6 03:39 ATLAS.root_0
[2025-06-06 05:53:17] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:39 start_atlas.sh
[2025-06-06 05:53:17] -rw-r--r-- 2 boinc boinc    508882 Jun  6 03:39 input.tar.gz
[2025-06-06 05:53:17] -rw------- 1 boinc boinc 180298475 Jun  6 05:52 HITS.pool.root.1
[2025-06-06 05:53:17] -rw------- 1 boinc boinc   1075200 Jun  6 05:53 result.tar.gz
05:53:18 (3253447): run_atlas exited; CPU time 30280.435105
05:53:18 (3253447): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN