Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:40:54 (1535071): wrapper (7.7.26015): starting
23:40:54 (1535071): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 23:40:54] Arguments: --nthreads 2
[2025-06-04 23:40:54] Threads: 2
[2025-06-04 23:40:54] Checking for CVMFS
[2025-06-04 23:40:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:40:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:40:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:40:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:40:54] 2.9.2.0 759356 3210 57564 146795 2 56 28926667 36864001 0 130560 0 2100734 99.989 828521 52933 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 23:40:54] CVMFS is ok
[2025-06-04 23:40:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:40:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:40:54] Further information can be found at the LHC@home message board.
[2025-06-04 23:40:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:40:54] Checking for apptainer binary...
[2025-06-04 23:40:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:40:54] Running /usr/bin/apptainer --version
[2025-06-04 23:40:54] apptainer version 1.3.6-6.1
[2025-06-04 23:40:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:40:54] thA354
[2025-06-04 23:40:54] apptainer works
[2025-06-04 23:40:54] Set ATHENA_PROC_NUMBER=2
[2025-06-04 23:40:54] Set ATHENA_CORE_NUMBER=2
[2025-06-04 23:40:54] Starting ATLAS job with PandaID=6679412254
[2025-06-04 23:40:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:28:54]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:28:54] 2025-06-04 23:28:41,264 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:28:54] 2025-06-04 23:28:41,264 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6679412254/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:28:54] 2025-06-04 23:28:41,264 | INFO     | extracted standard info from prmon json
[2025-06-05 01:28:54] 2025-06-04 23:28:41,264 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:28:54] 2025-06-04 23:28:41,264 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:28:54] 2025-06-04 23:28:41,264 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:28:54] 2025-06-04 23:28:41,264 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:28:54] 2025-06-04 23:28:41,266 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:28:54] 2025-06-04 23:28:41,266 | INFO     | sum of square deviations: 369281342.5
[2025-06-05 01:28:54] 2025-06-04 23:28:41,266 | INFO     | sum of deviations: -9347956132.5
[2025-06-05 01:28:54] 2025-06-04 23:28:41,266 | INFO     | mean x: 1749076498.5
[2025-06-05 01:28:54] 2025-06-04 23:28:41,266 | INFO     | mean y: 2310305.4811320757
[2025-06-05 01:28:54] 2025-06-04 23:28:41,266 | INFO     | -- intersect: 44278282304.702034
[2025-06-05 01:28:54] 2025-06-04 23:28:41,266 | INFO     | intersect: 44278282304.702034
[2025-06-05 01:28:54] 2025-06-04 23:28:41,266 | INFO     | chi2: 2.2433069921472844
[2025-06-05 01:28:54] 2025-06-04 23:28:41,267 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,267 | INFO     | sum of deviations: -2834549159.0000014
[2025-06-05 01:28:54] 2025-06-04 23:28:41,267 | INFO     | mean x: 1749076346.0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,267 | INFO     | mean y: 2329563.9603960398
[2025-06-05 01:28:54] 2025-06-04 23:28:41,267 | INFO     | -- intersect: 15522367922.587934
[2025-06-05 01:28:54] 2025-06-04 23:28:41,267 | INFO     | intersect: 15522367922.587934
[2025-06-05 01:28:54] 2025-06-04 23:28:41,267 | INFO     | chi2: 1.6245354699292427
[2025-06-05 01:28:54] 2025-06-04 23:28:41,267 | INFO     | current chi2=1.6245354699292427 (change=27.583006890454886 %)
[2025-06-05 01:28:54] 2025-06-04 23:28:41,267 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,267 | INFO     | sum of deviations: -2225338102.5
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | mean x: 1749076193.5
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | mean y: 2331623.96875
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | -- intersect: 14191591280.345627
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | intersect: 14191591280.345627
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | chi2: 1.6262276861457259
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | current chi2=1.6262276861457259 (change=-0.10416615997660512 %)
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | right removable region: 95
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | sum of deviations: -21530716587.0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | mean x: 1749076651.0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | mean y: 2346407.089108911
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | -- intersect: 117889737609.19022
[2025-06-05 01:28:54] 2025-06-04 23:28:41,268 | INFO     | intersect: 117889737609.19022
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | chi2: 0.7901376976549848
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | current chi2=0.7901376976549848 (change=64.77799514641248 %)
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | sum of deviations: -16499840224.000002
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | mean x: 1749076803.5
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | mean y: 2329383.7708333335
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | -- intersect: 105209083636.02423
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | intersect: 105209083636.02423
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | chi2: 0.7656255386286112
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | current chi2=0.7656255386286112 (change=3.102264212822926 %)
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | left removable region: 20
[2025-06-05 01:28:54] 2025-06-04 23:28:41,269 | INFO     | sum of square deviations: 130793150.0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | sum of deviations: -3509484879.0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | mean x: 1749076773.0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | mean y: 2327117.506666667
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | -- intersect: 46934131168.81681
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | intersect: 46934131168.81681
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | chi2: 0.06284856342509498
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | -- intersect: 46934131168.81681
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | current memory leak: -26.83 B/s (using 75 data points, chi2=0.06)
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | ..............................
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | . Timing measurements:
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | . get job = 0 s
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | . initial setup = 1 s
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | . payload setup = 8 s
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | . stage-in = 0 s
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | . payload execution = 6413 s
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | . stage-out = 0 s
[2025-06-05 01:28:54] 2025-06-04 23:28:41,270 | INFO     | . log creation = 0 s
[2025-06-05 01:28:54] 2025-06-04 23:28:41,271 | INFO     | ..............................
[2025-06-05 01:28:54] 2025-06-04 23:28:41,309 | INFO     | 
[2025-06-05 01:28:54] 2025-06-04 23:28:41,309 | INFO     | job summary report
[2025-06-05 01:28:54] 2025-06-04 23:28:41,309 | INFO     | --------------------------------------------------
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | PanDA job id: 6679412254
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | task id: 45006595
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | errors: (none)
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | pilot state: finished 
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | transexitcode: 0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | exeerrorcode: 0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | exeerrordiag: 
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | exitcode: 0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | exitmsg: OK
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | cpuconsumptiontime: 12477 s
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | nevents: 400
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | neventsw: 0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | pid: 1545162
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | pgrp: 1545162
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | corecount: 2
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | event service: False
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | sizes: {0: 2397295, 7: 2397501, 11: 2397529, 6425: 2424510, 6426: 2433457, 6428: 2433513, 6436: 2433811}
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | --------------------------------------------------
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | 
[2025-06-05 01:28:54] 2025-06-04 23:28:41,310 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 01:28:54] 2025-06-04 23:28:41,321 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,321 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | job 6679412254 has completed (purged errors)
[2025-06-05 01:28:54] 2025-06-04 23:28:41,322 | INFO     | overall cleanup function is called
[2025-06-05 01:28:54] 2025-06-04 23:28:42,328 | INFO     | --- collectZombieJob: --- 10, [1545162]
[2025-06-05 01:28:54] 2025-06-04 23:28:42,329 | INFO     | zombie collector waiting for pid 1545162
[2025-06-05 01:28:54] 2025-06-04 23:28:42,329 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:28:54] 2025-06-04 23:28:42,329 | INFO     | collected zombie processes
[2025-06-05 01:28:54] 2025-06-04 23:28:42,329 | INFO     | will attempt to kill all subprocesses of pid=1545162
[2025-06-05 01:28:54] 2025-06-04 23:28:42,364 | INFO     | process IDs to be killed: [1545162] (in reverse order)
[2025-06-05 01:28:54] 2025-06-04 23:28:42,385 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:28:54] 2025-06-04 23:28:42,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:28:54] 2025-06-04 23:28:42,386 | INFO     | did not find any defunct processes belonging to 1545162
[2025-06-05 01:28:54] 2025-06-04 23:28:42,386 | INFO     | did not find any defunct processes belonging to 1545162
[2025-06-05 01:28:54] 2025-06-04 23:28:42,387 | INFO     | ready for new job
[2025-06-05 01:28:54] 2025-06-04 23:28:42,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:28:54] 2025-06-04 23:28:42,387 | INFO     | **************************************
[2025-06-05 01:28:54] 2025-06-04 23:28:42,387 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:28:54] 2025-06-04 23:28:42,387 | INFO     | **************************************
[2025-06-05 01:28:54] 2025-06-04 23:28:42,387 | INFO     | 
[2025-06-05 01:28:54] 2025-06-04 23:28:42,387 | INFO     | architecture information:
[2025-06-05 01:28:54] 2025-06-04 23:28:42,388 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:28:54] 2025-06-04 23:28:42,396 | INFO     | cat /etc/os-release:
[2025-06-05 01:28:54] NAME="CentOS Linux"
[2025-06-05 01:28:54] VERSION="7 (Core)"
[2025-06-05 01:28:54] ID="centos"
[2025-06-05 01:28:54] ID_LIKE="rhel fedora"
[2025-06-05 01:28:54] VERSION_ID="7"
[2025-06-05 01:28:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:28:54] ANSI_COLOR="0;31"
[2025-06-05 01:28:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:28:54] HOME_URL="https://www.centos.org/"
[2025-06-05 01:28:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:28:54] 
[2025-06-05 01:28:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:28:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:28:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:28:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:28:54] 
[2025-06-05 01:28:54] 2025-06-04 23:28:42,396 | INFO     | **************************************
[2025-06-05 01:28:54] 2025-06-04 23:28:42,899 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 01:28:54] 2025-06-04 23:28:42,930 | INFO     | sufficient remaining disk space (491398365184 B)
[2025-06-05 01:28:54] 2025-06-04 23:28:42,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:28:54] 2025-06-04 23:28:42,931 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:28:54] 2025-06-04 23:28:42,931 | INFO     | update_server=False
[2025-06-05 01:28:54] 2025-06-04 23:28:42,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:28:54] 2025-06-04 23:28:42,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:28:54] 2025-06-04 23:28:43,357 | INFO     | all data control threads have been joined
[2025-06-05 01:28:54] 2025-06-04 23:28:43,383 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:28:54] 2025-06-04 23:28:43,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:28:54] 2025-06-04 23:28:43,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:28:54] 2025-06-04 23:28:43,488 | INFO     | all payload control threads have been joined
[2025-06-05 01:28:54] 2025-06-04 23:28:43,734 | INFO     | all job control threads have been joined
[2025-06-05 01:28:54] 2025-06-04 23:28:43,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:28:54] 2025-06-04 23:28:43,819 | INFO     | aborting loop
[2025-06-05 01:28:54] 2025-06-04 23:28:43,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:28:54] 2025-06-04 23:28:43,937 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:43,938 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:44,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:28:54] 2025-06-04 23:28:44,059 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:44,150 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:44,363 | INFO     | [data] control thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:44,494 | INFO     | [payload] control thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:44,733 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:44,739 | INFO     | [job] control thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:44,819 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:44,856 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:45,232 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:45,339 | INFO     | [job] validate thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:45,380 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:45,420 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:45,887 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:48,017 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:28:54] 2025-06-04 23:28:49,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350339336000)>', '<ExcThread(monitor, started 140349842376448)>']
[2025-06-05 01:28:54] 2025-06-04 23:28:50,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:28:54] 2025-06-04 23:28:50,421 | INFO     | [monitor] control thread has ended
[2025-06-05 01:28:54] 2025-06-04 23:28:54,815 | INFO     | all workflow threads have been joined
[2025-06-05 01:28:54] 2025-06-04 23:28:54,815 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:28:54] 2025-06-04 23:28:54,816 | INFO     | traces error code: 0
[2025-06-05 01:28:54] 2025-06-04 23:28:54,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:28:54] 2025-06-04 23:28:54,857 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:28:54] 2025-06-04 23:28:54,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:28:54] 2025-06-04 23:28:54,862 [wrapper] pilotpid: 1538691
[2025-06-05 01:28:54] 2025-06-04 23:28:54,865 [wrapper] Pilot exit status: 0
[2025-06-05 01:28:54] 2025-06-04 23:28:54,871 [wrapper] pandaids: 6679412254
[2025-06-05 01:28:54] 2025-06-04 23:28:54,884 [wrapper] cleanup supervisor_pilot 1560234 1538692
[2025-06-05 01:28:54] 2025-06-04 23:28:54,886 [wrapper] Test setup, not cleaning
[2025-06-05 01:28:54] 2025-06-04 23:28:54,888 [wrapper] apfmon messages muted
[2025-06-05 01:28:54] 2025-06-04 23:28:54,890 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:28:54] 2025-06-04 23:28:54,892 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:28:54]  *** Error codes and diagnostics ***
[2025-06-05 01:28:54]     "exeErrorCode": 0,
[2025-06-05 01:28:54]     "exeErrorDiag": "",
[2025-06-05 01:28:54]     "pilotErrorCode": 0,
[2025-06-05 01:28:54]     "pilotErrorDiag": "",
[2025-06-05 01:28:54]  *** Listing of results directory ***
[2025-06-05 01:28:54] total 386516
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 01:28:54] -rwx------ 1 boinc boinc     37140 Jun  4 11:03 runpilot2-wrapper.sh
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc      5111 Jun  4 11:03 queuedata.json
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc       100 Jun  4 23:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:28:54] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 23:40 run_atlas
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc       105 Jun  4 23:40 job.xml
[2025-06-05 01:28:54] -rw-r--r-- 2 boinc boinc 215056936 Jun  4 23:40 EVNT.45006593._001441.pool.root.1
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc      6689 Jun  4 23:40 init_data.xml
[2025-06-05 01:28:54] drwxrwx--x 2 boinc boinc      4096 Jun  4 23:40 shared
[2025-06-05 01:28:54] -rw-r--r-- 2 boinc boinc    508878 Jun  4 23:40 input.tar.gz
[2025-06-05 01:28:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:40 start_atlas.sh
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc         0 Jun  4 23:40 boinc_lockfile
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc      2525 Jun  4 23:40 pandaJob.out
[2025-06-05 01:28:54] -rw------- 1 boinc boinc    987032 Jun  4 23:41 agis_schedconf.cvmfs.json
[2025-06-05 01:28:54] -rw------- 1 boinc boinc   1598969 Jun  4 23:41 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:28:54] drwx------ 4 boinc boinc      4096 Jun  4 23:41 pilot3
[2025-06-05 01:28:54] -rw------- 1 boinc boinc 175218665 Jun  5 01:28 HITS.45006595._056262.pool.root.1
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc       529 Jun  5 01:28 boinc_task_state.xml
[2025-06-05 01:28:54] -rw------- 1 boinc boinc      1015 Jun  5 01:28 memory_monitor_summary.json
[2025-06-05 01:28:54] -rw------- 1 boinc boinc    231941 Jun  5 01:28 log.45006595._056262.job.log.tgz.1
[2025-06-05 01:28:54] -rw------- 1 boinc boinc        95 Jun  5 01:28 pilot_heartbeat.json
[2025-06-05 01:28:54] -rw------- 1 boinc boinc      7652 Jun  5 01:28 heartbeat.json
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:28 boinc_mmap_file
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc        27 Jun  5 01:28 wrapper_checkpoint.txt
[2025-06-05 01:28:54] -rw------- 1 boinc boinc      4357 Jun  5 01:28 pilotlog.txt
[2025-06-05 01:28:54] -rw------- 1 boinc boinc    614347 Jun  5 01:28 log.45006595._056262.job.log.1
[2025-06-05 01:28:54] -rw------- 1 boinc boinc       357 Jun  5 01:28 output.list
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:28 runtime_log
[2025-06-05 01:28:54] -rw------- 1 boinc boinc    860160 Jun  5 01:28 result.tar.gz
[2025-06-05 01:28:54] -rw------- 1 boinc boinc       659 Jun  5 01:28 2W8LDmdCzg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmU0aKDmmg5nPm.diag
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc      8733 Jun  5 01:28 runtime_log.err
[2025-06-05 01:28:54] -rw-r--r-- 1 boinc boinc     20770 Jun  5 01:28 stderr.txt
[2025-06-05 01:28:54] HITS file was successfully produced:
[2025-06-05 01:28:54] -rw------- 1 boinc boinc 175218665 Jun  5 01:28 shared/HITS.pool.root.1
[2025-06-05 01:28:54]  *** Contents of shared directory: ***
[2025-06-05 01:28:54] total 382496
[2025-06-05 01:28:54] -rw-r--r-- 2 boinc boinc 215056936 Jun  4 23:40 ATLAS.root_0
[2025-06-05 01:28:54] -rw-r--r-- 2 boinc boinc    508878 Jun  4 23:40 input.tar.gz
[2025-06-05 01:28:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:40 start_atlas.sh
[2025-06-05 01:28:54] -rw------- 1 boinc boinc 175218665 Jun  5 01:28 HITS.pool.root.1
[2025-06-05 01:28:54] -rw------- 1 boinc boinc    860160 Jun  5 01:28 result.tar.gz
01:28:56 (1535071): run_atlas exited; CPU time 12502.917608
01:28:56 (1535071): called boinc_finish(0)

</stderr_txt>
]]>

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