Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:41:20 (199950): wrapper (7.7.26015): starting
09:41:20 (199950): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 09:41:20] Arguments: --nthreads 9
[2025-06-04 09:41:20] Threads: 9
[2025-06-04 09:41:20] Checking for CVMFS
[2025-06-04 09:41:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:41:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:41:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:41:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:41:21] 2.11.2.0 6489 28856 269392 146781 0 197 15720646 18432000 5592 130560 1 67233446 99.423 81234004 29374 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:41:21] CVMFS is ok
[2025-06-04 09:41:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:41:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:41:21] Further information can be found at the LHC@home message board.
[2025-06-04 09:41:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:41:21] Checking for apptainer binary...
[2025-06-04 09:41:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:41:21] Running /usr/bin/apptainer --version
[2025-06-04 09:41:21] apptainer version 1.3.2-1.el7
[2025-06-04 09:41:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:41:22] c-210-31-2.aglt2.org
[2025-06-04 09:41:22] apptainer works
[2025-06-04 09:41:22] Set ATHENA_PROC_NUMBER=9
[2025-06-04 09:41:22] Set ATHENA_CORE_NUMBER=9
[2025-06-04 09:41:22] Starting ATLAS job with PandaID=6678979225
[2025-06-04 09:41:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:41:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:41:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:41:55]  replicas=None
[2025-06-04 10:41:55]  scope=mc23_13p6TeV
[2025-06-04 10:41:55]  status=None
[2025-06-04 10:41:55]  status_code=0
[2025-06-04 10:41:55]  storage_token=
[2025-06-04 10:41:55]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678979225/log.45006595._055736.job.log.tgz.1
[2025-06-04 10:41:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/a0/log.45006595._055736.job.log.tgz.1
[2025-06-04 10:41:55]  workdir=None
[2025-06-04 10:41:55] ]
[2025-06-04 10:41:55] 2025-06-04 14:41:34,807 | INFO     | transferring file log.45006595._055736.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678979225/log.45006595._055736.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:41:55] 2025-06-04 14:41:34,807 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678979225/log.45006595._055736.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._055736.job
[2025-06-04 10:41:55] 2025-06-04 14:41:34,834 | INFO     | adding to output.list: log.45006595._055736.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/a0/log.45006595._055736.job.log.tg
[2025-06-04 10:41:55] 2025-06-04 14:41:34,835 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:41:55] 2025-06-04 14:41:34,835 | INFO     | summary of transferred files:
[2025-06-04 10:41:55] 2025-06-04 14:41:34,835 | INFO     |  -- lfn=log.45006595._055736.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:41:55] 2025-06-04 14:41:34,836 | INFO     | stage-out finished correctly
[2025-06-04 10:41:55] 2025-06-04 14:41:34,918 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:41:55] 2025-06-04 14:41:35,122 | INFO     | number of running child processes to parent process 209988: 1
[2025-06-04 10:41:55] 2025-06-04 14:41:35,122 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:41:55] 2025-06-04 14:41:36,909 | INFO     | job 6678979225 has state=finished
[2025-06-04 10:41:55] 2025-06-04 14:41:36,909 | INFO     | preparing for final server update for job 6678979225 in state='finished'
[2025-06-04 10:41:55] 2025-06-04 14:41:36,993 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 10:41:55] 2025-06-04 14:41:36,994 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:41:55] 2025-06-04 14:41:36,994 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:41:55] 2025-06-04 14:41:36,994 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:41:55] 2025-06-04 14:41:36,994 | INFO     | job 6678979225 has finished - writing final server update
[2025-06-04 10:41:55] 2025-06-04 14:41:36,994 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:41:55] 2025-06-04 14:41:36,997 | INFO     | executing command: lscpu
[2025-06-04 10:41:55] 2025-06-04 14:41:37,048 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:41:55] 2025-06-04 14:41:37,625 | INFO     | monitor loop #274: job 0:6678979225 is in state 'finished'
[2025-06-04 10:41:55] 2025-06-04 14:41:37,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:41:55] 2025-06-04 14:41:40,128 | INFO     | monitor loop #275: job 0:6678979225 is in state 'finished'
[2025-06-04 10:41:55] 2025-06-04 14:41:40,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:41:55] 2025-06-04 14:41:40,621 | INFO     | PID=203577 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 10:41:55] 2025-06-04 14:41:40,621 | INFO     | .. there are 10 such processes running
[2025-06-04 10:41:55] 2025-06-04 14:41:42,632 | INFO     | monitor loop #276: job 0:6678979225 is in state 'finished'
[2025-06-04 10:41:55] 2025-06-04 14:41:42,632 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:41:55] 2025-06-04 14:41:42,795 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:41:55] 2025-06-04 14:41:42,796 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678979225/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:41:55] 2025-06-04 14:41:42,796 | INFO     | extracted standard info from prmon json
[2025-06-04 10:41:55] 2025-06-04 14:41:42,796 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:41:55] 2025-06-04 14:41:42,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:41:55] 2025-06-04 14:41:42,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:41:55] 2025-06-04 14:41:42,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:41:55] 2025-06-04 14:41:42,798 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:41:55] 2025-06-04 14:41:42,798 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 10:41:55] 2025-06-04 14:41:42,799 | INFO     | sum of deviations: -418136151.0
[2025-06-04 10:41:55] 2025-06-04 14:41:42,799 | INFO     | mean x: 1749046382.5
[2025-06-04 10:41:55] 2025-06-04 14:41:42,799 | INFO     | mean y: 2651143.0384615385
[2025-06-04 10:41:55] 2025-06-04 14:41:42,799 | INFO     | -- intersect: 16782623090.566721
[2025-06-04 10:41:55] 2025-06-04 14:41:42,799 | INFO     | intersect: 16782623090.566721
[2025-06-04 10:41:55] 2025-06-04 14:41:42,799 | INFO     | chi2: 0.006421632593800922
[2025-06-04 10:41:55] 2025-06-04 14:41:42,799 | INFO     | -- intersect: 16782623090.566721
[2025-06-04 10:41:55] 2025-06-04 14:41:42,799 | INFO     | current memory leak: -9.59 B/s (using 52 data points, chi2=0.01)
[2025-06-04 10:41:55] 2025-06-04 14:41:42,800 | INFO     | ..............................
[2025-06-04 10:41:55] 2025-06-04 14:41:42,800 | INFO     | . Timing measurements:
[2025-06-04 10:41:55] 2025-06-04 14:41:42,800 | INFO     | . get job = 0 s
[2025-06-04 10:41:55] 2025-06-04 14:41:42,800 | INFO     | . initial setup = 2 s
[2025-06-04 10:41:55] 2025-06-04 14:41:42,800 | INFO     | . payload setup = 7 s
[2025-06-04 10:41:55] 2025-06-04 14:41:42,800 | INFO     | . stage-in = 0 s
[2025-06-04 10:41:55] 2025-06-04 14:41:42,800 | INFO     | . payload execution = 3573 s
[2025-06-04 10:41:55] 2025-06-04 14:41:42,800 | INFO     | . stage-out = 0 s
[2025-06-04 10:41:55] 2025-06-04 14:41:42,800 | INFO     | . log creation = 0 s
[2025-06-04 10:41:55] 2025-06-04 14:41:42,800 | INFO     | ..............................
[2025-06-04 10:41:55] 2025-06-04 14:41:43,016 | INFO     | 
[2025-06-04 10:41:55] 2025-06-04 14:41:43,016 | INFO     | job summary report
[2025-06-04 10:41:55] 2025-06-04 14:41:43,016 | INFO     | --------------------------------------------------
[2025-06-04 10:41:55] 2025-06-04 14:41:43,016 | INFO     | PanDA job id: 6678979225
[2025-06-04 10:41:55] 2025-06-04 14:41:43,016 | INFO     | task id: 45006595
[2025-06-04 10:41:55] 2025-06-04 14:41:43,016 | INFO     | errors: (none)
[2025-06-04 10:41:55] 2025-06-04 14:41:43,016 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:41:55] 2025-06-04 14:41:43,016 | INFO     | pilot state: finished 
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | transexitcode: 0
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | exeerrorcode: 0
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | exeerrordiag: 
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | exitcode: 0
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | exitmsg: OK
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | cpuconsumptiontime: 28953 s
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | nevents: 400
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | neventsw: 0
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | pid: 209988
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | pgrp: 209988
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | corecount: 9
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | event service: False
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | sizes: {0: 2397290, 5: 2397496, 11: 2397552, 3584: 2423113, 3585: 2432138, 3593: 2432252}
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | --------------------------------------------------
[2025-06-04 10:41:55] 2025-06-04 14:41:43,017 | INFO     | 
[2025-06-04 10:41:55] 2025-06-04 14:41:43,018 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:41:55] 2025-06-04 14:41:43,053 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,053 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,053 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,053 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,054 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,054 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,054 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,054 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,054 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,054 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,054 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,055 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,055 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,055 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:41:55] 2025-06-04 14:41:43,055 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,055 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:41:55] 2025-06-04 14:41:43,055 | INFO     | job 6678979225 has completed (purged errors)
[2025-06-04 10:41:55] 2025-06-04 14:41:43,055 | INFO     | overall cleanup function is called
[2025-06-04 10:41:55] 2025-06-04 14:41:44,063 | INFO     | --- collectZombieJob: --- 10, [209988]
[2025-06-04 10:41:55] 2025-06-04 14:41:44,063 | INFO     | zombie collector waiting for pid 209988
[2025-06-04 10:41:55] 2025-06-04 14:41:44,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:41:55] 2025-06-04 14:41:44,063 | INFO     | collected zombie processes
[2025-06-04 10:41:55] 2025-06-04 14:41:44,063 | INFO     | will attempt to kill all subprocesses of pid=209988
[2025-06-04 10:41:55] 2025-06-04 14:41:44,234 | INFO     | process IDs to be killed: [209988] (in reverse order)
[2025-06-04 10:41:55] 2025-06-04 14:41:44,321 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:41:55] 2025-06-04 14:41:44,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:41:55] 2025-06-04 14:41:44,327 | INFO     | did not find any defunct processes belonging to 209988
[2025-06-04 10:41:55] 2025-06-04 14:41:44,332 | INFO     | did not find any defunct processes belonging to 209988
[2025-06-04 10:41:55] 2025-06-04 14:41:44,332 | INFO     | ready for new job
[2025-06-04 10:41:55] 2025-06-04 14:41:44,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:41:55] 2025-06-04 14:41:44,333 | INFO     | **************************************
[2025-06-04 10:41:55] 2025-06-04 14:41:44,334 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:41:55] 2025-06-04 14:41:44,334 | INFO     | **************************************
[2025-06-04 10:41:55] 2025-06-04 14:41:44,334 | INFO     | 
[2025-06-04 10:41:55] 2025-06-04 14:41:44,336 | INFO     | architecture information:
[2025-06-04 10:41:55] 2025-06-04 14:41:44,337 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:41:55] 2025-06-04 14:41:44,354 | INFO     | cat /etc/os-release:
[2025-06-04 10:41:55] NAME="CentOS Linux"
[2025-06-04 10:41:55] VERSION="7 (Core)"
[2025-06-04 10:41:55] ID="centos"
[2025-06-04 10:41:55] ID_LIKE="rhel fedora"
[2025-06-04 10:41:55] VERSION_ID="7"
[2025-06-04 10:41:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:41:55] ANSI_COLOR="0;31"
[2025-06-04 10:41:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:41:55] HOME_URL="https://www.centos.org/"
[2025-06-04 10:41:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:41:55] 
[2025-06-04 10:41:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:41:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:41:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:41:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:41:55] 
[2025-06-04 10:41:55] 2025-06-04 14:41:44,355 | INFO     | **************************************
[2025-06-04 10:41:55] 2025-06-04 14:41:44,858 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:41:55] 2025-06-04 14:41:44,877 | INFO     | sufficient remaining disk space (56462671872 B)
[2025-06-04 10:41:55] 2025-06-04 14:41:44,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:41:55] 2025-06-04 14:41:44,878 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:41:55] 2025-06-04 14:41:44,878 | INFO     | update_server=False
[2025-06-04 10:41:55] 2025-06-04 14:41:44,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:41:55] 2025-06-04 14:41:44,878 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:41:55] 2025-06-04 14:41:44,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:41:55] 2025-06-04 14:41:44,879 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:41:55] 2025-06-04 14:41:44,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:41:55] 2025-06-04 14:41:44,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:41:55] 2025-06-04 14:41:45,135 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:41:55] 2025-06-04 14:41:45,135 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:41:55] 2025-06-04 14:41:45,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:41:55] 2025-06-04 14:41:45,135 | INFO     | will abort loop
[2025-06-04 10:41:55] 2025-06-04 14:41:45,191 | INFO     | all payload control threads have been joined
[2025-06-04 10:41:55] 2025-06-04 14:41:45,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:41:55] 2025-06-04 14:41:45,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:41:55] 2025-06-04 14:41:45,753 | INFO     | all job control threads have been joined
[2025-06-04 10:41:55] 2025-06-04 14:41:45,825 | INFO     | all data control threads have been joined
[2025-06-04 10:41:55] 2025-06-04 14:41:45,883 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:45,884 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:45,957 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:45,965 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:45,982 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:46,141 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:46,155 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:46,196 | INFO     | [payload] control thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:46,304 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:46,758 | INFO     | [job] control thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:46,830 | INFO     | [data] control thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:46,898 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:47,035 | INFO     | [job] validate thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:47,337 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:47,432 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:49,528 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:41:55] 2025-06-04 14:41:49,752 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622285313856)>', '<ExcThread(monitor, started 140621700384512)>']
[2025-06-04 10:41:55] 2025-06-04 14:41:49,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:41:55] 2025-06-04 14:41:49,907 | INFO     | [monitor] control thread has ended
[2025-06-04 10:41:55] 2025-06-04 14:41:54,778 | INFO     | all workflow threads have been joined
[2025-06-04 10:41:55] 2025-06-04 14:41:54,778 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:41:55] 2025-06-04 14:41:54,779 | INFO     | traces error code: 0
[2025-06-04 10:41:55] 2025-06-04 14:41:54,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:41:55] 2025-06-04 14:41:54,968 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:41:55] 2025-06-04 14:41:55,011 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:41:55] 2025-06-04 14:41:55,014 [wrapper] pilotpid: 203577
[2025-06-04 10:41:55] 2025-06-04 14:41:55,016 [wrapper] Pilot exit status: 0
[2025-06-04 10:41:55] 2025-06-04 14:41:55,048 [wrapper] pandaids: 6678979225
[2025-06-04 10:41:55] 2025-06-04 14:41:55,095 [wrapper] cleanup supervisor_pilot  22698 203578
[2025-06-04 10:41:55] 2025-06-04 14:41:55,098 [wrapper] Test setup, not cleaning
[2025-06-04 10:41:55] 2025-06-04 14:41:55,101 [wrapper] apfmon messages muted
[2025-06-04 10:41:55] 2025-06-04 14:41:55,104 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:41:55] 2025-06-04 14:41:55,107 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:41:55]  *** Error codes and diagnostics ***
[2025-06-04 10:41:55]     "exeErrorCode": 0,
[2025-06-04 10:41:55]     "exeErrorDiag": "",
[2025-06-04 10:41:55]     "pilotErrorCode": 0,
[2025-06-04 10:41:55]     "pilotErrorDiag": "",
[2025-06-04 10:41:55]  *** Listing of results directory ***
[2025-06-04 10:41:55] total 391348
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:32 queuedata.json
[2025-06-04 10:41:55] -rwx------ 1 boincer umatlas     37140 Jun  4 04:32 runpilot2-wrapper.sh
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:41:55] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:41 run_atlas
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:41 job.xml
[2025-06-04 10:41:55] -rw-r--r-- 2 boincer umatlas 216880398 Jun  4 09:41 EVNT.45006593._000702.pool.root.1
[2025-06-04 10:41:55] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:41 start_atlas.sh
[2025-06-04 10:41:55] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:41 shared
[2025-06-04 10:41:55] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 09:41 input.tar.gz
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:41 boinc_lockfile
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 09:41 pandaJob.out
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas    986819 Jun  4 09:41 agis_schedconf.cvmfs.json
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas   1598969 Jun  4 09:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:41:55] drwx------ 4 boincer umatlas      4096 Jun  4 09:41 pilot3
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas      6355 Jun  4 10:40 init_data.xml
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas 178673896 Jun  4 10:41 HITS.45006595._055736.pool.root.1
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:41 boinc_task_state.xml
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas        95 Jun  4 10:41 pilot_heartbeat.json
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas      1044 Jun  4 10:41 memory_monitor_summary.json
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas    307705 Jun  4 10:41 log.45006595._055736.job.log.tgz.1
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas      7730 Jun  4 10:41 heartbeat.json
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:41 boinc_mmap_file
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:41 wrapper_checkpoint.txt
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas      4662 Jun  4 10:41 pilotlog.txt
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas    369884 Jun  4 10:41 log.45006595._055736.job.log.1
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas       357 Jun  4 10:41 output.list
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:41 runtime_log
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas    696320 Jun  4 10:41 result.tar.gz
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 10:41 runtime_log.err
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas       658 Jun  4 10:41 ozVLDmYjyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmynnKDmUiULqm.diag
[2025-06-04 10:41:55] -rw-r--r-- 1 boincer umatlas     21843 Jun  4 10:41 stderr.txt
[2025-06-04 10:41:55] HITS file was successfully produced:
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas 178673896 Jun  4 10:41 shared/HITS.pool.root.1
[2025-06-04 10:41:55]  *** Contents of shared directory: ***
[2025-06-04 10:41:55] total 387488
[2025-06-04 10:41:55] -rw-r--r-- 2 boincer umatlas 216880398 Jun  4 09:41 ATLAS.root_0
[2025-06-04 10:41:55] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:41 start_atlas.sh
[2025-06-04 10:41:55] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 09:41 input.tar.gz
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas 178673896 Jun  4 10:41 HITS.pool.root.1
[2025-06-04 10:41:55] -rw------- 1 boincer umatlas    696320 Jun  4 10:41 result.tar.gz
10:41:57 (199950): run_atlas exited; CPU time 28922.617615
10:41:57 (199950): called boinc_finish(0)

</stderr_txt>
]]>

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