Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
16:56:23 (275899): wrapper (7.7.26015): starting
16:56:23 (275899): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 16:56:23] Arguments: --nthreads 4
[2025-06-05 16:56:23] Threads: 4
[2025-06-05 16:56:23] Checking for CVMFS
[2025-06-05 16:56:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:56:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:56:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:56:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:56:23] 2.12.7.0 412895 4073 58744 146822 1 187 4522695 6144000 2751 130560 0 11649108 99.9974 921812 9463 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-06-05 16:56:23] CVMFS is ok
[2025-06-05 16:56:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:56:23] Checking for apptainer binary...
[2025-06-05 16:56:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:56:23] Running /usr/bin/apptainer --version
[2025-06-05 16:56:23] apptainer version 1.4.0
[2025-06-05 16:56:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:56:23] Ryzen5
[2025-06-05 16:56:23] apptainer works
[2025-06-05 16:56:23] Set ATHENA_PROC_NUMBER=4
[2025-06-05 16:56:23] Set ATHENA_CORE_NUMBER=4
[2025-06-05 16:56:23] Starting ATLAS job with PandaID=6679585487
[2025-06-05 16:56:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc4/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:25:04]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:25:04]  is_altstaged=None
[2025-06-05 18:25:04]  is_tar=False
[2025-06-05 18:25:04]  lfn=log.45006595._056493.job.log.tgz.1
[2025-06-05 18:25:04]  mtime=0
[2025-06-05 18:25:04]  protocol_id=None
[2025-06-05 18:25:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 18:25:04]  replicas=None
[2025-06-05 18:25:04]  scope=mc23_13p6TeV
[2025-06-05 18:25:04]  status=None
[2025-06-05 18:25:04]  status_code=0
[2025-06-05 18:25:04]  storage_token=
[2025-06-05 18:25:04]  surl=/var/lib/boinc4/slots/0/PanDA_Pilot-6679585487/log.45006595._056493.job.log.tgz.1
[2025-06-05 18:25:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/69/log.45006595._056493.job.log.tgz.1
[2025-06-05 18:25:04]  workdir=None
[2025-06-05 18:25:04] ]
[2025-06-05 18:25:04] 2025-06-05 16:24:38,458 | INFO     | transferring file log.45006595._056493.job.log.tgz.1 from /var/lib/boinc4/slots/0/PanDA_Pilot-6679585487/log.45006595._056493.job.log.tgz.1 to /var/lib/boinc4/slot
[2025-06-05 18:25:04] 2025-06-05 16:24:38,458 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc4/slots/0/PanDA_Pilot-6679585487/log.45006595._056493.job.log.tgz.1 /var/lib/boinc4/slots/0/log.45006595._056493.j
[2025-06-05 18:25:04] 2025-06-05 16:24:38,470 | INFO     | adding to output.list: log.45006595._056493.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/69/log.45006595._056493.job.log.tg
[2025-06-05 18:25:04] 2025-06-05 16:24:38,471 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 18:25:04] 2025-06-05 16:24:38,471 | INFO     | summary of transferred files:
[2025-06-05 18:25:04] 2025-06-05 16:24:38,471 | INFO     |  -- lfn=log.45006595._056493.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 18:25:04] 2025-06-05 16:24:38,471 | INFO     | stage-out finished correctly
[2025-06-05 18:25:04] 2025-06-05 16:24:39,171 | WARNING  | process 286159 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 18:25:04] 2025-06-05 16:24:39,171 | INFO     | using path: /var/lib/boinc4/slots/0/PanDA_Pilot-6679585487/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:25:04] 2025-06-05 16:24:39,249 | INFO     | number of running child processes to parent process 286159: 1
[2025-06-05 18:25:04] 2025-06-05 16:24:39,249 | INFO     | maximum number of monitored processes: 6
[2025-06-05 18:25:04] 2025-06-05 16:24:41,752 | INFO     | monitor loop #403: job 0:6679585487 is in state 'finished'
[2025-06-05 18:25:04] 2025-06-05 16:24:41,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:25:04] 2025-06-05 16:24:41,848 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 18:25:04] 2025-06-05 16:24:41,912 | INFO     | job 6679585487 has state=finished
[2025-06-05 18:25:04] 2025-06-05 16:24:41,912 | INFO     | preparing for final server update for job 6679585487 in state='finished'
[2025-06-05 18:25:04] 2025-06-05 16:24:41,912 | INFO     | this job has now completed (state=finished)
[2025-06-05 18:25:04] 2025-06-05 16:24:41,912 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 18:25:04] 2025-06-05 16:24:41,912 | INFO     | log transfer has been attempted: DONE
[2025-06-05 18:25:04] 2025-06-05 16:24:41,912 | INFO     | job 6679585487 has finished - writing final server update
[2025-06-05 18:25:04] 2025-06-05 16:24:41,913 | INFO     | total number of processed events: 400 (read)
[2025-06-05 18:25:04] 2025-06-05 16:24:41,914 | INFO     | executing command: lscpu
[2025-06-05 18:25:04] 2025-06-05 16:24:41,934 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 18:25:04] 2025-06-05 16:24:44,253 | INFO     | monitor loop #404: job 0:6679585487 is in state 'finished'
[2025-06-05 18:25:04] 2025-06-05 16:24:44,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:25:04] 2025-06-05 16:24:45,311 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 18:25:04] 2025-06-05 16:24:45,311 | INFO     | using path: /var/lib/boinc4/slots/0/PanDA_Pilot-6679585487/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:25:04] 2025-06-05 16:24:45,311 | INFO     | extracted standard info from prmon json
[2025-06-05 18:25:04] 2025-06-05 16:24:45,311 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:25:04] 2025-06-05 16:24:45,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:25:04] 2025-06-05 16:24:45,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:25:04] 2025-06-05 16:24:45,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:25:04] 2025-06-05 16:24:45,313 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:25:04] 2025-06-05 16:24:45,313 | INFO     | sum of square deviations: 158737860.0
[2025-06-05 18:25:04] 2025-06-05 16:24:45,314 | INFO     | sum of deviations: -6577816233.000001
[2025-06-05 18:25:04] 2025-06-05 16:24:45,314 | INFO     | mean x: 1749138124.5
[2025-06-05 18:25:04] 2025-06-05 16:24:45,314 | INFO     | mean y: 2401162.275
[2025-06-05 18:25:04] 2025-06-05 16:24:45,314 | INFO     | -- intersect: 72483592159.15045
[2025-06-05 18:25:04] 2025-06-05 16:24:45,314 | INFO     | intersect: 72483592159.15045
[2025-06-05 18:25:04] 2025-06-05 16:24:45,314 | INFO     | chi2: 0.1039620626584968
[2025-06-05 18:25:04] 2025-06-05 16:24:45,314 | INFO     | -- intersect: 72483592159.15045
[2025-06-05 18:25:04] 2025-06-05 16:24:45,314 | INFO     | current memory leak: -41.44 B/s (using 80 data points, chi2=0.10)
[2025-06-05 18:25:04] 2025-06-05 16:24:45,314 | INFO     | ..............................
[2025-06-05 18:25:04] 2025-06-05 16:24:45,314 | INFO     | . Timing measurements:
[2025-06-05 18:25:04] 2025-06-05 16:24:45,314 | INFO     | . get job = 0 s
[2025-06-05 18:25:04] 2025-06-05 16:24:45,315 | INFO     | . initial setup = 1 s
[2025-06-05 18:25:04] 2025-06-05 16:24:45,315 | INFO     | . payload setup = 4 s
[2025-06-05 18:25:04] 2025-06-05 16:24:45,315 | INFO     | . stage-in = 0 s
[2025-06-05 18:25:04] 2025-06-05 16:24:45,315 | INFO     | . payload execution = 5267 s
[2025-06-05 18:25:04] 2025-06-05 16:24:45,315 | INFO     | . stage-out = 0 s
[2025-06-05 18:25:04] 2025-06-05 16:24:45,315 | INFO     | . log creation = 0 s
[2025-06-05 18:25:04] 2025-06-05 16:24:45,315 | INFO     | ..............................
[2025-06-05 18:25:04] 2025-06-05 16:24:45,775 | INFO     | 
[2025-06-05 18:25:04] 2025-06-05 16:24:45,775 | INFO     | job summary report
[2025-06-05 18:25:04] 2025-06-05 16:24:45,775 | INFO     | --------------------------------------------------
[2025-06-05 18:25:04] 2025-06-05 16:24:45,775 | INFO     | PanDA job id: 6679585487
[2025-06-05 18:25:04] 2025-06-05 16:24:45,775 | INFO     | task id: 45006595
[2025-06-05 18:25:04] 2025-06-05 16:24:45,775 | INFO     | errors: (none)
[2025-06-05 18:25:04] 2025-06-05 16:24:45,775 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | pilot state: finished 
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | transexitcode: 0
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | exeerrorcode: 0
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | exeerrordiag: 
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | exitcode: 0
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | exitmsg: OK
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | cpuconsumptiontime: 20161 s
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | nevents: 400
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | neventsw: 0
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | pid: 286159
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | pgrp: 286159
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | corecount: 4
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | event service: False
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | sizes: {0: 2397176, 1: 2397318, 3: 2397524, 11: 2397552, 5275: 2424021, 5276: 2433147, 5280: 2433147, 5283: 2433317}
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | --------------------------------------------------
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | 
[2025-06-05 18:25:04] 2025-06-05 16:24:45,776 | INFO     | executing command: ls -lF /var/lib/boinc4/slots/0
[2025-06-05 18:25:04] 2025-06-05 16:24:45,789 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,789 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:25:04] 2025-06-05 16:24:45,791 | INFO     | job 6679585487 has completed (purged errors)
[2025-06-05 18:25:04] 2025-06-05 16:24:45,791 | INFO     | overall cleanup function is called
[2025-06-05 18:25:04] 2025-06-05 16:24:46,797 | INFO     | --- collectZombieJob: --- 10, [286159]
[2025-06-05 18:25:04] 2025-06-05 16:24:46,797 | INFO     | zombie collector waiting for pid 286159
[2025-06-05 18:25:04] 2025-06-05 16:24:46,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:25:04] 2025-06-05 16:24:46,798 | INFO     | collected zombie processes
[2025-06-05 18:25:04] 2025-06-05 16:24:46,798 | INFO     | will attempt to kill all subprocesses of pid=286159
[2025-06-05 18:25:04] 2025-06-05 16:24:46,880 | INFO     | process IDs to be killed: [286159] (in reverse order)
[2025-06-05 18:25:04] 2025-06-05 16:24:46,914 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:25:04] 2025-06-05 16:24:46,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:25:04] 2025-06-05 16:24:46,917 | INFO     | did not find any defunct processes belonging to 286159
[2025-06-05 18:25:04] 2025-06-05 16:24:46,919 | INFO     | did not find any defunct processes belonging to 286159
[2025-06-05 18:25:04] 2025-06-05 16:24:46,920 | INFO     | ready for new job
[2025-06-05 18:25:04] 2025-06-05 16:24:46,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:25:04] 2025-06-05 16:24:46,921 | INFO     | **************************************
[2025-06-05 18:25:04] 2025-06-05 16:24:46,921 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:25:04] 2025-06-05 16:24:46,921 | INFO     | **************************************
[2025-06-05 18:25:04] 2025-06-05 16:24:46,921 | INFO     | 
[2025-06-05 18:25:04] 2025-06-05 16:24:46,922 | INFO     | architecture information:
[2025-06-05 18:25:04] 2025-06-05 16:24:46,922 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:25:04] 2025-06-05 16:24:46,931 | INFO     | cat /etc/os-release:
[2025-06-05 18:25:04] NAME="CentOS Linux"
[2025-06-05 18:25:04] VERSION="7 (Core)"
[2025-06-05 18:25:04] ID="centos"
[2025-06-05 18:25:04] ID_LIKE="rhel fedora"
[2025-06-05 18:25:04] VERSION_ID="7"
[2025-06-05 18:25:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:25:04] ANSI_COLOR="0;31"
[2025-06-05 18:25:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:25:04] HOME_URL="https://www.centos.org/"
[2025-06-05 18:25:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:25:04] 
[2025-06-05 18:25:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:25:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:25:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:25:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:25:04] 
[2025-06-05 18:25:04] 2025-06-05 16:24:46,931 | INFO     | **************************************
[2025-06-05 18:25:04] 2025-06-05 16:24:47,434 | INFO     | executing command: df -mP /var/lib/boinc4/slots/0
[2025-06-05 18:25:04] 2025-06-05 16:24:47,444 | INFO     | sufficient remaining disk space (226255437824 B)
[2025-06-05 18:25:04] 2025-06-05 16:24:47,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:25:04] 2025-06-05 16:24:47,445 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:25:04] 2025-06-05 16:24:47,445 | INFO     | update_server=False
[2025-06-05 18:25:04] 2025-06-05 16:24:47,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:25:04] 2025-06-05 16:24:47,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:25:04] 2025-06-05 16:24:47,519 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:25:04] 2025-06-05 16:24:47,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:25:04] 2025-06-05 16:24:47,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:25:04] 2025-06-05 16:24:47,679 | INFO     | all data control threads have been joined
[2025-06-05 18:25:04] 2025-06-05 16:24:47,735 | INFO     | all payload control threads have been joined
[2025-06-05 18:25:04] 2025-06-05 16:24:47,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:25:04] 2025-06-05 16:24:47,761 | INFO     | aborting loop
[2025-06-05 18:25:04] 2025-06-05 16:24:47,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:25:04] 2025-06-05 16:24:48,450 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:48,466 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:48,627 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:48,654 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:48,684 | INFO     | [data] control thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:48,740 | INFO     | [payload] control thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:48,766 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:49,010 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:49,042 | INFO     | all job control threads have been joined
[2025-06-05 18:25:04] 2025-06-05 16:24:49,450 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:49,472 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:49,801 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:49,871 | INFO     | [job] validate thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:50,048 | INFO     | [job] control thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:50,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:25:04] 2025-06-05 16:24:51,400 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:51,921 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:58,041 | INFO     | job.realtimelogging is not enabled
[2025-06-05 18:25:04] 2025-06-05 16:24:59,047 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:25:04] 2025-06-05 16:24:59,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129529269323584)>', '<ExcThread(monitor, started 129528429016832)>']
[2025-06-05 18:25:04] 2025-06-05 16:24:59,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:25:04] 2025-06-05 16:24:59,580 | INFO     | [monitor] control thread has ended
[2025-06-05 18:25:04] 2025-06-05 16:25:04,398 | INFO     | all workflow threads have been joined
[2025-06-05 18:25:04] 2025-06-05 16:25:04,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:25:04] 2025-06-05 16:25:04,398 | INFO     | traces error code: 0
[2025-06-05 18:25:04] 2025-06-05 16:25:04,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:25:04] 2025-06-05 16:25:04,463 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:25:04] 2025-06-05 16:25:04,465 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:25:04] 2025-06-05 16:25:04,466 [wrapper] pilotpid: 279581
[2025-06-05 18:25:04] 2025-06-05 16:25:04,468 [wrapper] Pilot exit status: 0
[2025-06-05 18:25:04] 2025-06-05 16:25:04,474 [wrapper] pandaids: 6679585487
[2025-06-05 18:25:04] 2025-06-05 16:25:04,495 [wrapper] cleanup supervisor_pilot  352839 279582
[2025-06-05 18:25:04] 2025-06-05 16:25:04,497 [wrapper] Test setup, not cleaning
[2025-06-05 18:25:04] 2025-06-05 16:25:04,499 [wrapper] apfmon messages muted
[2025-06-05 18:25:04] 2025-06-05 16:25:04,500 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:25:04] 2025-06-05 16:25:04,502 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:25:04]  *** Error codes and diagnostics ***
[2025-06-05 18:25:04]     "exeErrorCode": 0,
[2025-06-05 18:25:04]     "exeErrorDiag": "",
[2025-06-05 18:25:04]     "pilotErrorCode": 0,
[2025-06-05 18:25:04]     "pilotErrorDiag": "",
[2025-06-05 18:25:04]  *** Listing of results directory ***
[2025-06-05 18:25:04] insgesamt 394128
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc    495897  4. Jun 11:04 pilot3.tar.gz
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc      5111  4. Jun 11:20 queuedata.json
[2025-06-05 18:25:04] -rwx------ 1 boinc boinc     37140  4. Jun 11:23 runpilot2-wrapper.sh
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc       100  5. Jun 16:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:25:04] -rwxr-xr-x 1 boinc boinc      7986  5. Jun 16:56 run_atlas
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc       105  5. Jun 16:56 job.xml
[2025-06-05 18:25:04] -rw-r--r-- 2 boinc boinc 218290622  5. Jun 16:56 EVNT.45006593._001805.pool.root.1
[2025-06-05 18:25:04] -rw-r--r-- 2 boinc boinc     15093  5. Jun 16:56 start_atlas.sh
[2025-06-05 18:25:04] drwxrwx--x 2 boinc boinc      4096  5. Jun 16:56 shared
[2025-06-05 18:25:04] -rw-r--r-- 2 boinc boinc    508886  5. Jun 16:56 input.tar.gz
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc      6965  5. Jun 16:56 init_data.xml
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc         0  5. Jun 16:56 boinc_lockfile
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc      2523  5. Jun 16:56 pandaJob.out
[2025-06-05 18:25:04] -rw------- 1 boinc boinc    983210  5. Jun 16:56 agis_schedconf.cvmfs.json
[2025-06-05 18:25:04] -rw------- 1 boinc boinc   1598969  5. Jun 16:56 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:25:04] drwx------ 4 boinc boinc      4096  5. Jun 16:56 pilot3
[2025-06-05 18:25:04] -rw------- 1 boinc boinc        95  5. Jun 18:24 pilot_heartbeat.json
[2025-06-05 18:25:04] -rw------- 1 boinc boinc 179952063  5. Jun 18:24 HITS.45006595._056493.pool.root.1
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc       529  5. Jun 18:24 boinc_task_state.xml
[2025-06-05 18:25:04] -rw------- 1 boinc boinc      1016  5. Jun 18:24 memory_monitor_summary.json
[2025-06-05 18:25:04] -rw------- 1 boinc boinc    236842  5. Jun 18:24 log.45006595._056493.job.log.tgz.1
[2025-06-05 18:25:04] -rw------- 1 boinc boinc      7637  5. Jun 18:24 heartbeat.json
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc        27  5. Jun 18:24 wrapper_checkpoint.txt
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc      8192  5. Jun 18:24 boinc_mmap_file
[2025-06-05 18:25:04] -rw------- 1 boinc boinc      4427  5. Jun 18:25 pilotlog.txt
[2025-06-05 18:25:04] -rw------- 1 boinc boinc    522982  5. Jun 18:25 log.45006595._056493.job.log.1
[2025-06-05 18:25:04] -rw------- 1 boinc boinc       357  5. Jun 18:25 output.list
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc       620  5. Jun 18:25 runtime_log
[2025-06-05 18:25:04] -rw------- 1 boinc boinc    778240  5. Jun 18:25 result.tar.gz
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc      8628  5. Jun 18:25 runtime_log.err
[2025-06-05 18:25:04] -rw------- 1 boinc boinc       642  5. Jun 18:25 GkhMDmFWzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWxnKDm1VV8Wn.diag
[2025-06-05 18:25:04] -rw-r--r-- 1 boinc boinc     21075  5. Jun 18:25 stderr.txt
[2025-06-05 18:25:04] HITS file was successfully produced:
[2025-06-05 18:25:04] -rw------- 1 boinc boinc 179952063  5. Jun 18:24 shared/HITS.pool.root.1
[2025-06-05 18:25:04]  *** Contents of shared directory: ***
[2025-06-05 18:25:04] insgesamt 390192
[2025-06-05 18:25:04] -rw-r--r-- 2 boinc boinc 218290622  5. Jun 16:56 ATLAS.root_0
[2025-06-05 18:25:04] -rw-r--r-- 2 boinc boinc     15093  5. Jun 16:56 start_atlas.sh
[2025-06-05 18:25:04] -rw-r--r-- 2 boinc boinc    508886  5. Jun 16:56 input.tar.gz
[2025-06-05 18:25:04] -rw------- 1 boinc boinc 179952063  5. Jun 18:24 HITS.pool.root.1
[2025-06-05 18:25:04] -rw------- 1 boinc boinc    778240  5. Jun 18:25 result.tar.gz
18:25:06 (275899): run_atlas exited; CPU time 20210.004997
18:25:06 (275899): called boinc_finish(0)

</stderr_txt>
]]>

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