Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:20:58 (30349): wrapper (7.7.26015): starting
09:20:58 (30349): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:20:58] Arguments: --nthreads 12
[2025-06-04 09:20:58] Threads: 12
[2025-06-04 09:20:58] Checking for CVMFS
[2025-06-04 09:20:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:20:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:20:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:20:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:20:59] 2.11.2.0 2984 35688 86864 146781 3 56 17296153 20275201 1 130560 0 16232975 99.983 6453817 7853 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:20:59] CVMFS is ok
[2025-06-04 09:20:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:20:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:20:59] Further information can be found at the LHC@home message board.
[2025-06-04 09:20:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:20:59] Checking for apptainer binary...
[2025-06-04 09:20:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:20:59] Running /usr/bin/apptainer --version
[2025-06-04 09:20:59] apptainer version 1.3.2-1.el7
[2025-06-04 09:20:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:21:01] c-205-26.aglt2.org
[2025-06-04 09:21:01] apptainer works
[2025-06-04 09:21:01] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:21:01] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:21:01] Starting ATLAS job with PandaID=6679579353
[2025-06-04 09:21:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:25:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:25:40]  guid=76a82b90-d4d1-4b18-963e-0c319e8d997e
[2025-06-04 10:25:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:25:40]  is_altstaged=None
[2025-06-04 10:25:40]  is_tar=False
[2025-06-04 10:25:40]  lfn=log.45006595._056475.job.log.tgz.1
[2025-06-04 10:25:40]  mtime=0
[2025-06-04 10:25:40]  protocol_id=None
[2025-06-04 10:25:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:25:40]  replicas=None
[2025-06-04 10:25:40]  scope=mc23_13p6TeV
[2025-06-04 10:25:40]  status=None
[2025-06-04 10:25:40]  status_code=0
[2025-06-04 10:25:40]  storage_token=
[2025-06-04 10:25:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679579353/log.45006595._056475.job.log.tgz.1
[2025-06-04 10:25:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/b0/log.45006595._056475.job.log.tgz.1
[2025-06-04 10:25:40]  workdir=None
[2025-06-04 10:25:40] ]
[2025-06-04 10:25:40] 2025-06-04 14:25:20,808 | INFO     | transferring file log.45006595._056475.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679579353/log.45006595._056475.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:25:40] 2025-06-04 14:25:20,808 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679579353/log.45006595._056475.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056475.job
[2025-06-04 10:25:40] 2025-06-04 14:25:20,829 | INFO     | adding to output.list: log.45006595._056475.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/b0/log.45006595._056475.job.log.tg
[2025-06-04 10:25:40] 2025-06-04 14:25:20,830 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:25:40] 2025-06-04 14:25:20,830 | INFO     | summary of transferred files:
[2025-06-04 10:25:40] 2025-06-04 14:25:20,831 | INFO     |  -- lfn=log.45006595._056475.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:25:40] 2025-06-04 14:25:20,831 | INFO     | stage-out finished correctly
[2025-06-04 10:25:40] 2025-06-04 14:25:22,564 | INFO     | monitor loop #288: job 0:6679579353 is in state 'finished'
[2025-06-04 10:25:40] 2025-06-04 14:25:22,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:25:40] 2025-06-04 14:25:22,859 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:25:40] 2025-06-04 14:25:22,939 | INFO     | job 6679579353 has state=finished
[2025-06-04 10:25:40] 2025-06-04 14:25:22,940 | INFO     | preparing for final server update for job 6679579353 in state='finished'
[2025-06-04 10:25:40] 2025-06-04 14:25:22,940 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:25:40] 2025-06-04 14:25:22,940 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:25:40] 2025-06-04 14:25:22,941 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:25:40] 2025-06-04 14:25:22,941 | INFO     | job 6679579353 has finished - writing final server update
[2025-06-04 10:25:40] 2025-06-04 14:25:22,941 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:25:40] 2025-06-04 14:25:22,943 | INFO     | executing command: lscpu
[2025-06-04 10:25:40] 2025-06-04 14:25:22,969 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:25:40] 2025-06-04 14:25:25,068 | INFO     | monitor loop #289: job 0:6679579353 is in state 'finished'
[2025-06-04 10:25:40] 2025-06-04 14:25:25,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:25:40] 2025-06-04 14:25:27,570 | INFO     | monitor loop #290: job 0:6679579353 is in state 'finished'
[2025-06-04 10:25:40] 2025-06-04 14:25:27,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:25:40] 2025-06-04 14:25:27,627 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 10:25:40] 2025-06-04 14:25:27,627 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679579353/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:25:40] 2025-06-04 14:25:27,628 | INFO     | extracted standard info from prmon json
[2025-06-04 10:25:40] 2025-06-04 14:25:27,628 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:25:40] 2025-06-04 14:25:27,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:25:40] 2025-06-04 14:25:27,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:25:40] 2025-06-04 14:25:27,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:25:40] 2025-06-04 14:25:27,631 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:25:40] 2025-06-04 14:25:27,632 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 10:25:40] 2025-06-04 14:25:27,632 | INFO     | sum of deviations: 1685049970.0
[2025-06-04 10:25:40] 2025-06-04 14:25:27,632 | INFO     | mean x: 1749045286.5
[2025-06-04 10:25:40] 2025-06-04 14:25:27,633 | INFO     | mean y: 2948795.0714285714
[2025-06-04 10:25:40] 2025-06-04 14:25:27,633 | INFO     | -- intersect: -54136002958.97102
[2025-06-04 10:25:40] 2025-06-04 14:25:27,633 | INFO     | intersect: -54136002958.97102
[2025-06-04 10:25:40] 2025-06-04 14:25:27,633 | INFO     | chi2: 0.02988261868926145
[2025-06-04 10:25:40] 2025-06-04 14:25:27,633 | INFO     | -- intersect: -54136002958.97102
[2025-06-04 10:25:40] 2025-06-04 14:25:27,634 | INFO     | current memory leak: 30.95 B/s (using 56 data points, chi2=0.03)
[2025-06-04 10:25:40] 2025-06-04 14:25:27,634 | INFO     | ..............................
[2025-06-04 10:25:40] 2025-06-04 14:25:27,634 | INFO     | . Timing measurements:
[2025-06-04 10:25:40] 2025-06-04 14:25:27,635 | INFO     | . get job = 0 s
[2025-06-04 10:25:40] 2025-06-04 14:25:27,635 | INFO     | . initial setup = 2 s
[2025-06-04 10:25:40] 2025-06-04 14:25:27,635 | INFO     | . payload setup = 9 s
[2025-06-04 10:25:40] 2025-06-04 14:25:27,635 | INFO     | . stage-in = 0 s
[2025-06-04 10:25:40] 2025-06-04 14:25:27,635 | INFO     | . payload execution = 3817 s
[2025-06-04 10:25:40] 2025-06-04 14:25:27,635 | INFO     | . stage-out = 0 s
[2025-06-04 10:25:40] 2025-06-04 14:25:27,635 | INFO     | . log creation = 0 s
[2025-06-04 10:25:40] 2025-06-04 14:25:27,636 | INFO     | ..............................
[2025-06-04 10:25:40] 2025-06-04 14:25:27,718 | INFO     | 
[2025-06-04 10:25:40] 2025-06-04 14:25:27,718 | INFO     | job summary report
[2025-06-04 10:25:40] 2025-06-04 14:25:27,719 | INFO     | --------------------------------------------------
[2025-06-04 10:25:40] 2025-06-04 14:25:27,719 | INFO     | PanDA job id: 6679579353
[2025-06-04 10:25:40] 2025-06-04 14:25:27,719 | INFO     | task id: 45006595
[2025-06-04 10:25:40] 2025-06-04 14:25:27,719 | INFO     | errors: (none)
[2025-06-04 10:25:40] 2025-06-04 14:25:27,719 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:25:40] 2025-06-04 14:25:27,719 | INFO     | pilot state: finished 
[2025-06-04 10:25:40] 2025-06-04 14:25:27,720 | INFO     | transexitcode: 0
[2025-06-04 10:25:40] 2025-06-04 14:25:27,720 | INFO     | exeerrorcode: 0
[2025-06-04 10:25:40] 2025-06-04 14:25:27,720 | INFO     | exeerrordiag: 
[2025-06-04 10:25:40] 2025-06-04 14:25:27,720 | INFO     | exitcode: 0
[2025-06-04 10:25:40] 2025-06-04 14:25:27,720 | INFO     | exitmsg: OK
[2025-06-04 10:25:40] 2025-06-04 14:25:27,720 | INFO     | cpuconsumptiontime: 40777 s
[2025-06-04 10:25:40] 2025-06-04 14:25:27,721 | INFO     | nevents: 400
[2025-06-04 10:25:40] 2025-06-04 14:25:27,721 | INFO     | neventsw: 0
[2025-06-04 10:25:40] 2025-06-04 14:25:27,721 | INFO     | pid: 8131
[2025-06-04 10:25:40] 2025-06-04 14:25:27,721 | INFO     | pgrp: 8131
[2025-06-04 10:25:40] 2025-06-04 14:25:27,721 | INFO     | corecount: 12
[2025-06-04 10:25:40] 2025-06-04 14:25:27,721 | INFO     | event service: False
[2025-06-04 10:25:40] 2025-06-04 14:25:27,722 | INFO     | sizes: {0: 2397117, 1: 2397316, 6: 2397522, 11: 2397550, 3830: 2423171, 3831: 2432112, 3833: 2432296, 3838: 2432466}
[2025-06-04 10:25:40] 2025-06-04 14:25:27,722 | INFO     | --------------------------------------------------
[2025-06-04 10:25:40] 2025-06-04 14:25:27,722 | INFO     | 
[2025-06-04 10:25:40] 2025-06-04 14:25:27,722 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:25:40] 2025-06-04 14:25:27,747 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,748 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:25:40] 2025-06-04 14:25:27,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:25:40] 2025-06-04 14:25:27,751 | INFO     | job 6679579353 has completed (purged errors)
[2025-06-04 10:25:40] 2025-06-04 14:25:27,751 | INFO     | overall cleanup function is called
[2025-06-04 10:25:40] 2025-06-04 14:25:28,759 | INFO     | --- collectZombieJob: --- 10, [8131]
[2025-06-04 10:25:40] 2025-06-04 14:25:28,759 | INFO     | zombie collector waiting for pid 8131
[2025-06-04 10:25:40] 2025-06-04 14:25:28,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:25:40] 2025-06-04 14:25:28,760 | INFO     | collected zombie processes
[2025-06-04 10:25:40] 2025-06-04 14:25:28,760 | INFO     | will attempt to kill all subprocesses of pid=8131
[2025-06-04 10:25:40] 2025-06-04 14:25:28,849 | INFO     | process IDs to be killed: [8131] (in reverse order)
[2025-06-04 10:25:40] 2025-06-04 14:25:28,899 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:25:40] 2025-06-04 14:25:28,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:25:40] 2025-06-04 14:25:28,901 | INFO     | did not find any defunct processes belonging to 8131
[2025-06-04 10:25:40] 2025-06-04 14:25:28,904 | INFO     | did not find any defunct processes belonging to 8131
[2025-06-04 10:25:40] 2025-06-04 14:25:28,904 | INFO     | ready for new job
[2025-06-04 10:25:40] 2025-06-04 14:25:28,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:25:40] 2025-06-04 14:25:28,905 | INFO     | **************************************
[2025-06-04 10:25:40] 2025-06-04 14:25:28,905 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:25:40] 2025-06-04 14:25:28,906 | INFO     | **************************************
[2025-06-04 10:25:40] 2025-06-04 14:25:28,906 | INFO     | 
[2025-06-04 10:25:40] 2025-06-04 14:25:28,906 | INFO     | architecture information:
[2025-06-04 10:25:40] 2025-06-04 14:25:28,907 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:25:40] 2025-06-04 14:25:28,920 | INFO     | cat /etc/os-release:
[2025-06-04 10:25:40] NAME="CentOS Linux"
[2025-06-04 10:25:40] VERSION="7 (Core)"
[2025-06-04 10:25:40] ID="centos"
[2025-06-04 10:25:40] ID_LIKE="rhel fedora"
[2025-06-04 10:25:40] VERSION_ID="7"
[2025-06-04 10:25:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:25:40] ANSI_COLOR="0;31"
[2025-06-04 10:25:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:25:40] HOME_URL="https://www.centos.org/"
[2025-06-04 10:25:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:25:40] 
[2025-06-04 10:25:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:25:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:25:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:25:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:25:40] 
[2025-06-04 10:25:40] 2025-06-04 14:25:28,920 | INFO     | **************************************
[2025-06-04 10:25:40] 2025-06-04 14:25:29,423 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:25:40] 2025-06-04 14:25:29,440 | INFO     | sufficient remaining disk space (29417799680 B)
[2025-06-04 10:25:40] 2025-06-04 14:25:29,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:25:40] 2025-06-04 14:25:29,441 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:25:40] 2025-06-04 14:25:29,441 | INFO     | update_server=False
[2025-06-04 10:25:40] 2025-06-04 14:25:29,441 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:25:40] 2025-06-04 14:25:29,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:25:40] 2025-06-04 14:25:29,442 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:25:40] 2025-06-04 14:25:29,442 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:25:40] 2025-06-04 14:25:29,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:25:40] 2025-06-04 14:25:29,442 | INFO     | aborting loop
[2025-06-04 10:25:40] 2025-06-04 14:25:29,455 | INFO     | all data control threads have been joined
[2025-06-04 10:25:40] 2025-06-04 14:25:29,781 | INFO     | PID=1579 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 10:25:40] 2025-06-04 14:25:29,781 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:25:40] 2025-06-04 14:25:29,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:25:40] 2025-06-04 14:25:29,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:25:40] 2025-06-04 14:25:30,447 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:30,448 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:30,448 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:30,460 | INFO     | [data] control thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:30,517 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:30,522 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:30,755 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:30,912 | INFO     | all payload control threads have been joined
[2025-06-04 10:25:40] 2025-06-04 14:25:30,966 | INFO     | all job control threads have been joined
[2025-06-04 10:25:40] 2025-06-04 14:25:31,235 | INFO     | [job] validate thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:31,330 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:31,448 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:31,472 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:31,566 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:31,737 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:31,917 | INFO     | [payload] control thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:31,971 | INFO     | [job] control thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:33,448 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:25:40] 2025-06-04 14:25:35,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760437380928)>', '<ExcThread(monitor, started 139759712204544)>']
[2025-06-04 10:25:40] 2025-06-04 14:25:35,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:25:40] 2025-06-04 14:25:35,819 | INFO     | [monitor] control thread has ended
[2025-06-04 10:25:40] 2025-06-04 14:25:40,092 | INFO     | all workflow threads have been joined
[2025-06-04 10:25:40] 2025-06-04 14:25:40,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:25:40] 2025-06-04 14:25:40,092 | INFO     | traces error code: 0
[2025-06-04 10:25:40] 2025-06-04 14:25:40,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:25:40] 2025-06-04 14:25:40,179 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:25:40] 2025-06-04 14:25:40,183 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:25:40] 2025-06-04 14:25:40,187 [wrapper] pilotpid: 1579
[2025-06-04 10:25:40] 2025-06-04 14:25:40,191 [wrapper] Pilot exit status: 0
[2025-06-04 10:25:40] 2025-06-04 14:25:40,206 [wrapper] pandaids: 6679579353
[2025-06-04 10:25:40] 2025-06-04 14:25:40,244 [wrapper] cleanup supervisor_pilot 18859 1580
[2025-06-04 10:25:40] 2025-06-04 14:25:40,248 [wrapper] Test setup, not cleaning
[2025-06-04 10:25:40] 2025-06-04 14:25:40,252 [wrapper] apfmon messages muted
[2025-06-04 10:25:40] 2025-06-04 14:25:40,256 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:25:40] 2025-06-04 14:25:40,260 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:25:40]  *** Error codes and diagnostics ***
[2025-06-04 10:25:40]     "exeErrorCode": 0,
[2025-06-04 10:25:40]     "exeErrorDiag": "",
[2025-06-04 10:25:40]     "pilotErrorCode": 0,
[2025-06-04 10:25:40]     "pilotErrorDiag": "",
[2025-06-04 10:25:40]  *** Listing of results directory ***
[2025-06-04 10:25:40] total 391828
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 05:04 pilot3.tar.gz
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 05:08 queuedata.json
[2025-06-04 10:25:40] -rwx------ 1 boincer umatlas     37140 Jun  4 05:09 runpilot2-wrapper.sh
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:25:40] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:20 run_atlas
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:20 job.xml
[2025-06-04 10:25:40] -rw-r--r-- 2 boincer umatlas 217288419 Jun  4 09:20 EVNT.45006593._000917.pool.root.1
[2025-06-04 10:25:40] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:20 start_atlas.sh
[2025-06-04 10:25:40] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:20 shared
[2025-06-04 10:25:40] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 09:20 input.tar.gz
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:20 boinc_lockfile
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas      2523 Jun  4 09:21 pandaJob.out
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas    986819 Jun  4 09:21 agis_schedconf.cvmfs.json
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas   1598969 Jun  4 09:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:25:40] drwx------ 4 boincer umatlas      4096 Jun  4 09:21 pilot3
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 10:19 init_data.xml
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas 178683370 Jun  4 10:24 HITS.45006595._056475.pool.root.1
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas        95 Jun  4 10:25 pilot_heartbeat.json
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:25 boinc_mmap_file
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:25 wrapper_checkpoint.txt
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:25 boinc_task_state.xml
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas      1049 Jun  4 10:25 memory_monitor_summary.json
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas    343363 Jun  4 10:25 log.45006595._056475.job.log.tgz.1
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas      7749 Jun  4 10:25 heartbeat.json
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas      4669 Jun  4 10:25 pilotlog.txt
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas    376785 Jun  4 10:25 log.45006595._056475.job.log.1
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas       357 Jun  4 10:25 output.list
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:25 runtime_log
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas    737280 Jun  4 10:25 result.tar.gz
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas       659 Jun  4 10:25 ZIPNDmNJzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmExnKDmPS3Wem.diag
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 10:25 runtime_log.err
[2025-06-04 10:25:40] -rw-r--r-- 1 boincer umatlas     21379 Jun  4 10:25 stderr.txt
[2025-06-04 10:25:40] HITS file was successfully produced:
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas 178683370 Jun  4 10:24 shared/HITS.pool.root.1
[2025-06-04 10:25:40]  *** Contents of shared directory: ***
[2025-06-04 10:25:40] total 387932
[2025-06-04 10:25:40] -rw-r--r-- 2 boincer umatlas 217288419 Jun  4 09:20 ATLAS.root_0
[2025-06-04 10:25:40] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:20 start_atlas.sh
[2025-06-04 10:25:40] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 09:20 input.tar.gz
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas 178683370 Jun  4 10:24 HITS.pool.root.1
[2025-06-04 10:25:40] -rw------- 1 boincer umatlas    737280 Jun  4 10:25 result.tar.gz
10:25:41 (30349): run_atlas exited; CPU time 40752.383359
10:25:41 (30349): called boinc_finish(0)

</stderr_txt>
]]>

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