Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:32:42 (229953): wrapper (7.7.26015): starting
10:32:42 (229953): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 10:32:42] Arguments: --nthreads 9
[2025-06-04 10:32:42] Threads: 9
[2025-06-04 10:32:42] Checking for CVMFS
[2025-06-04 10:32:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:32:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:32:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:32:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:32:44] 2.11.2.0 5225 28907 236024 146781 3 320 12009001 18432000 7881 130560 0 57967962 99.413 70618920 29458 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:32:44] CVMFS is ok
[2025-06-04 10:32:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:32:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:32:44] Further information can be found at the LHC@home message board.
[2025-06-04 10:32:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:32:44] Checking for apptainer binary...
[2025-06-04 10:32:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:32:44] Running /usr/bin/apptainer --version
[2025-06-04 10:32:44] apptainer version 1.3.2-1.el7
[2025-06-04 10:32:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:32:44] c-210-33-2.aglt2.org
[2025-06-04 10:32:44] apptainer works
[2025-06-04 10:32:44] Set ATHENA_PROC_NUMBER=9
[2025-06-04 10:32:44] Set ATHENA_CORE_NUMBER=9
[2025-06-04 10:32:44] Starting ATLAS job with PandaID=6678364616
[2025-06-04 10:32:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:51:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:51:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:51:58]  is_altstaged=None
[2025-06-04 11:51:58]  is_tar=False
[2025-06-04 11:51:58]  lfn=log.45006595._054100.job.log.tgz.1
[2025-06-04 11:51:58]  mtime=0
[2025-06-04 11:51:58]  protocol_id=None
[2025-06-04 11:51:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:51:58]  replicas=None
[2025-06-04 11:51:58]  scope=mc23_13p6TeV
[2025-06-04 11:51:58]  status=None
[2025-06-04 11:51:58]  status_code=0
[2025-06-04 11:51:58]  storage_token=
[2025-06-04 11:51:58]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678364616/log.45006595._054100.job.log.tgz.1
[2025-06-04 11:51:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/be/log.45006595._054100.job.log.tgz.1
[2025-06-04 11:51:58]  workdir=None
[2025-06-04 11:51:58] ]
[2025-06-04 11:51:58] 2025-06-04 15:51:32,049 | INFO     | transferring file log.45006595._054100.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678364616/log.45006595._054100.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:51:58] 2025-06-04 15:51:32,049 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678364616/log.45006595._054100.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._054100.job
[2025-06-04 11:51:58] 2025-06-04 15:51:32,074 | INFO     | adding to output.list: log.45006595._054100.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/be/log.45006595._054100.job.log.tg
[2025-06-04 11:51:58] 2025-06-04 15:51:32,075 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:51:58] 2025-06-04 15:51:32,075 | INFO     | summary of transferred files:
[2025-06-04 11:51:58] 2025-06-04 15:51:32,075 | INFO     |  -- lfn=log.45006595._054100.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:51:58] 2025-06-04 15:51:32,075 | INFO     | stage-out finished correctly
[2025-06-04 11:51:58] 2025-06-04 15:51:33,625 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:51:58] 2025-06-04 15:51:33,707 | INFO     | job 6678364616 has state=finished
[2025-06-04 11:51:58] 2025-06-04 15:51:33,707 | INFO     | preparing for final server update for job 6678364616 in state='finished'
[2025-06-04 11:51:58] 2025-06-04 15:51:33,707 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:51:58] 2025-06-04 15:51:33,707 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:51:58] 2025-06-04 15:51:33,707 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:51:58] 2025-06-04 15:51:33,708 | INFO     | job 6678364616 has finished - writing final server update
[2025-06-04 11:51:58] 2025-06-04 15:51:33,708 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:51:58] 2025-06-04 15:51:33,711 | INFO     | executing command: lscpu
[2025-06-04 11:51:58] 2025-06-04 15:51:33,756 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:51:58] 2025-06-04 15:51:36,937 | WARNING  | process 242756 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:51:58] 2025-06-04 15:51:36,938 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678364616/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:51:58] 2025-06-04 15:51:37,118 | INFO     | number of running child processes to parent process 242756: 1
[2025-06-04 11:51:58] 2025-06-04 15:51:37,118 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:51:58] 2025-06-04 15:51:37,281 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:51:58] 2025-06-04 15:51:37,281 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678364616/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:51:58] 2025-06-04 15:51:37,282 | INFO     | extracted standard info from prmon json
[2025-06-04 11:51:58] 2025-06-04 15:51:37,282 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:51:58] 2025-06-04 15:51:37,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:51:58] 2025-06-04 15:51:37,282 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:51:58] 2025-06-04 15:51:37,282 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:51:58] 2025-06-04 15:51:37,284 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:51:58] 2025-06-04 15:51:37,284 | INFO     | sum of square deviations: 106336877.5
[2025-06-04 11:51:58] 2025-06-04 15:51:37,284 | INFO     | sum of deviations: 304220023.50000054
[2025-06-04 11:51:58] 2025-06-04 15:51:37,285 | INFO     | mean x: 1749050022.5
[2025-06-04 11:51:58] 2025-06-04 15:51:37,285 | INFO     | mean y: 2547929.2714285715
[2025-06-04 11:51:58] 2025-06-04 15:51:37,285 | INFO     | -- intersect: -5001323271.927107
[2025-06-04 11:51:58] 2025-06-04 15:51:37,285 | INFO     | intersect: -5001323271.927107
[2025-06-04 11:51:58] 2025-06-04 15:51:37,285 | INFO     | chi2: 0.052722338802708525
[2025-06-04 11:51:58] 2025-06-04 15:51:37,285 | INFO     | -- intersect: -5001323271.927107
[2025-06-04 11:51:58] 2025-06-04 15:51:37,285 | INFO     | current memory leak: 2.86 B/s (using 70 data points, chi2=0.05)
[2025-06-04 11:51:58] 2025-06-04 15:51:37,286 | INFO     | ..............................
[2025-06-04 11:51:58] 2025-06-04 15:51:37,286 | INFO     | . Timing measurements:
[2025-06-04 11:51:58] 2025-06-04 15:51:37,286 | INFO     | . get job = 0 s
[2025-06-04 11:51:58] 2025-06-04 15:51:37,286 | INFO     | . initial setup = 2 s
[2025-06-04 11:51:58] 2025-06-04 15:51:37,286 | INFO     | . payload setup = 8 s
[2025-06-04 11:51:58] 2025-06-04 15:51:37,286 | INFO     | . stage-in = 0 s
[2025-06-04 11:51:58] 2025-06-04 15:51:37,286 | INFO     | . payload execution = 4685 s
[2025-06-04 11:51:58] 2025-06-04 15:51:37,286 | INFO     | . stage-out = 0 s
[2025-06-04 11:51:58] 2025-06-04 15:51:37,286 | INFO     | . log creation = 0 s
[2025-06-04 11:51:58] 2025-06-04 15:51:37,286 | INFO     | ..............................
[2025-06-04 11:51:58] 2025-06-04 15:51:37,718 | INFO     | 
[2025-06-04 11:51:58] 2025-06-04 15:51:37,719 | INFO     | job summary report
[2025-06-04 11:51:58] 2025-06-04 15:51:37,719 | INFO     | --------------------------------------------------
[2025-06-04 11:51:58] 2025-06-04 15:51:37,719 | INFO     | PanDA job id: 6678364616
[2025-06-04 11:51:58] 2025-06-04 15:51:37,719 | INFO     | task id: 45006595
[2025-06-04 11:51:58] 2025-06-04 15:51:37,719 | INFO     | errors: (none)
[2025-06-04 11:51:58] 2025-06-04 15:51:37,719 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:51:58] 2025-06-04 15:51:37,719 | INFO     | pilot state: finished 
[2025-06-04 11:51:58] 2025-06-04 15:51:37,719 | INFO     | transexitcode: 0
[2025-06-04 11:51:58] 2025-06-04 15:51:37,719 | INFO     | exeerrorcode: 0
[2025-06-04 11:51:58] 2025-06-04 15:51:37,719 | INFO     | exeerrordiag: 
[2025-06-04 11:51:58] 2025-06-04 15:51:37,719 | INFO     | exitcode: 0
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | exitmsg: OK
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | cpuconsumptiontime: 33251 s
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | nevents: 400
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | neventsw: 0
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | pid: 242756
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | pgrp: 242756
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | corecount: 9
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | event service: False
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | sizes: {0: 2396514, 1: 2397370, 7: 2397576, 12: 2397604, 4696: 2423802, 4697: 2432743, 4699: 2432927, 4702: 2433097}
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | --------------------------------------------------
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | 
[2025-06-04 11:51:58] 2025-06-04 15:51:37,720 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 11:51:58] 2025-06-04 15:51:37,746 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,748 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,748 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,748 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,748 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:51:58] 2025-06-04 15:51:37,748 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,748 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:51:58] 2025-06-04 15:51:37,748 | INFO     | job 6678364616 has completed (purged errors)
[2025-06-04 11:51:58] 2025-06-04 15:51:37,748 | INFO     | overall cleanup function is called
[2025-06-04 11:51:58] 2025-06-04 15:51:38,755 | INFO     | --- collectZombieJob: --- 10, [242756]
[2025-06-04 11:51:58] 2025-06-04 15:51:38,755 | INFO     | zombie collector waiting for pid 242756
[2025-06-04 11:51:58] 2025-06-04 15:51:38,756 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:51:58] 2025-06-04 15:51:38,756 | INFO     | collected zombie processes
[2025-06-04 11:51:58] 2025-06-04 15:51:38,756 | INFO     | will attempt to kill all subprocesses of pid=242756
[2025-06-04 11:51:58] 2025-06-04 15:51:38,883 | INFO     | process IDs to be killed: [242756] (in reverse order)
[2025-06-04 11:51:58] 2025-06-04 15:51:38,962 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:51:58] 2025-06-04 15:51:38,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:51:58] 2025-06-04 15:51:38,969 | INFO     | did not find any defunct processes belonging to 242756
[2025-06-04 11:51:58] 2025-06-04 15:51:38,975 | INFO     | did not find any defunct processes belonging to 242756
[2025-06-04 11:51:58] 2025-06-04 15:51:38,975 | INFO     | ready for new job
[2025-06-04 11:51:58] 2025-06-04 15:51:38,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:51:58] 2025-06-04 15:51:38,977 | INFO     | **************************************
[2025-06-04 11:51:58] 2025-06-04 15:51:38,977 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:51:58] 2025-06-04 15:51:38,977 | INFO     | **************************************
[2025-06-04 11:51:58] 2025-06-04 15:51:38,977 | INFO     | 
[2025-06-04 11:51:58] 2025-06-04 15:51:38,980 | INFO     | architecture information:
[2025-06-04 11:51:58] 2025-06-04 15:51:38,981 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:51:58] 2025-06-04 15:51:39,003 | INFO     | cat /etc/os-release:
[2025-06-04 11:51:58] NAME="CentOS Linux"
[2025-06-04 11:51:58] VERSION="7 (Core)"
[2025-06-04 11:51:58] ID="centos"
[2025-06-04 11:51:58] ID_LIKE="rhel fedora"
[2025-06-04 11:51:58] VERSION_ID="7"
[2025-06-04 11:51:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:51:58] ANSI_COLOR="0;31"
[2025-06-04 11:51:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:51:58] HOME_URL="https://www.centos.org/"
[2025-06-04 11:51:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:51:58] 
[2025-06-04 11:51:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:51:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:51:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:51:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:51:58] 
[2025-06-04 11:51:58] 2025-06-04 15:51:39,003 | INFO     | **************************************
[2025-06-04 11:51:58] 2025-06-04 15:51:39,506 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 11:51:58] 2025-06-04 15:51:39,528 | INFO     | sufficient remaining disk space (57936969728 B)
[2025-06-04 11:51:58] 2025-06-04 15:51:39,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:51:58] 2025-06-04 15:51:39,529 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:51:58] 2025-06-04 15:51:39,529 | INFO     | update_server=False
[2025-06-04 11:51:58] 2025-06-04 15:51:39,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:51:58] 2025-06-04 15:51:39,529 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:51:58] 2025-06-04 15:51:39,529 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:51:58] 2025-06-04 15:51:39,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:51:58] 2025-06-04 15:51:39,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:51:58] 2025-06-04 15:51:39,566 | INFO     | all payload control threads have been joined
[2025-06-04 11:51:58] 2025-06-04 15:51:39,580 | INFO     | all data control threads have been joined
[2025-06-04 11:51:58] 2025-06-04 15:51:39,621 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:51:58] 2025-06-04 15:51:39,622 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:51:58] 2025-06-04 15:51:39,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:51:58] 2025-06-04 15:51:39,622 | INFO     | will abort loop
[2025-06-04 11:51:58] 2025-06-04 15:51:39,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:51:58] 2025-06-04 15:51:40,176 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:51:58] 2025-06-04 15:51:40,507 | INFO     | all job control threads have been joined
[2025-06-04 11:51:58] 2025-06-04 15:51:40,533 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:40,544 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:40,572 | INFO     | [payload] control thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:40,585 | INFO     | [data] control thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:40,626 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:40,652 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:40,907 | INFO     | [job] validate thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:41,389 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:41,508 | INFO     | [job] control thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:41,857 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:41,891 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:42,019 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:42,182 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:42,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:51:58] 2025-06-04 15:51:43,399 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:43,718 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:50,390 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:51:58] 2025-06-04 15:51:51,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:51:58] 2025-06-04 15:51:53,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140330070177600)>', '<ExcThread(monitor, started 140329617430272)>']
[2025-06-04 11:51:58] 2025-06-04 15:51:53,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:51:58] 2025-06-04 15:51:53,602 | INFO     | [monitor] control thread has ended
[2025-06-04 11:51:58] 2025-06-04 15:51:58,032 | INFO     | all workflow threads have been joined
[2025-06-04 11:51:58] 2025-06-04 15:51:58,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:51:58] 2025-06-04 15:51:58,033 | INFO     | traces error code: 0
[2025-06-04 11:51:58] 2025-06-04 15:51:58,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:51:58] 2025-06-04 15:51:58,212 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:51:58] 2025-06-04 15:51:58,215 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:51:58] 2025-06-04 15:51:58,219 [wrapper] pilotpid: 235560
[2025-06-04 11:51:58] 2025-06-04 15:51:58,223 [wrapper] Pilot exit status: 0
[2025-06-04 11:51:58] 2025-06-04 15:51:58,236 [wrapper] pandaids: 6678364616
[2025-06-04 11:51:58] 2025-06-04 15:51:58,290 [wrapper] cleanup supervisor_pilot 106226 235561
[2025-06-04 11:51:58] 2025-06-04 15:51:58,293 [wrapper] Test setup, not cleaning
[2025-06-04 11:51:58] 2025-06-04 15:51:58,296 [wrapper] apfmon messages muted
[2025-06-04 11:51:58] 2025-06-04 15:51:58,300 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:51:58] 2025-06-04 15:51:58,304 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:51:58]  *** Error codes and diagnostics ***
[2025-06-04 11:51:58]     "exeErrorCode": 0,
[2025-06-04 11:51:58]     "exeErrorDiag": "",
[2025-06-04 11:51:58]     "pilotErrorCode": 0,
[2025-06-04 11:51:58]     "pilotErrorDiag": "",
[2025-06-04 11:51:58]  *** Listing of results directory ***
[2025-06-04 11:51:58] total 388320
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 11:51:58] -rwx------ 1 boincer umatlas     37140 Jun  4 02:29 runpilot2-wrapper.sh
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:29 queuedata.json
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:51:58] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:32 run_atlas
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:32 job.xml
[2025-06-04 11:51:58] -rw-r--r-- 2 boincer umatlas 218291602 Jun  4 10:32 EVNT.45006593._002165.pool.root.1
[2025-06-04 11:51:58] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:32 start_atlas.sh
[2025-06-04 11:51:58] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:32 shared
[2025-06-04 11:51:58] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 10:32 input.tar.gz
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:32 boinc_lockfile
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 10:32 pandaJob.out
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas    986819 Jun  4 10:32 agis_schedconf.cvmfs.json
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas   1598969 Jun  4 10:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:51:58] drwx------ 4 boincer umatlas      4096 Jun  4 10:32 pilot3
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas      6269 Jun  4 11:46 init_data.xml
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas 173878693 Jun  4 11:50 HITS.45006595._054100.pool.root.1
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:51 boinc_task_state.xml
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas        95 Jun  4 11:51 pilot_heartbeat.json
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas      1057 Jun  4 11:51 memory_monitor_summary.json
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas    326237 Jun  4 11:51 log.45006595._054100.job.log.tgz.1
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas      7746 Jun  4 11:51 heartbeat.json
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:51 boinc_mmap_file
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:51 wrapper_checkpoint.txt
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas      4734 Jun  4 11:51 pilotlog.txt
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas    496301 Jun  4 11:51 log.45006595._054100.job.log.1
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas       357 Jun  4 11:51 output.list
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:51 runtime_log
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas    839680 Jun  4 11:51 result.tar.gz
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 11:51 runtime_log.err
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas       660 Jun  4 11:51 CrsNDmynwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0UnKDmqdITfn.diag
[2025-06-04 11:51:58] -rw-r--r-- 1 boincer umatlas     21340 Jun  4 11:51 stderr.txt
[2025-06-04 11:51:58] HITS file was successfully produced:
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas 173878693 Jun  4 11:50 shared/HITS.pool.root.1
[2025-06-04 11:51:58]  *** Contents of shared directory: ***
[2025-06-04 11:51:58] total 384320
[2025-06-04 11:51:58] -rw-r--r-- 2 boincer umatlas 218291602 Jun  4 10:32 ATLAS.root_0
[2025-06-04 11:51:58] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:32 start_atlas.sh
[2025-06-04 11:51:58] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 10:32 input.tar.gz
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas 173878693 Jun  4 11:50 HITS.pool.root.1
[2025-06-04 11:51:58] -rw------- 1 boincer umatlas    839680 Jun  4 11:51 result.tar.gz
11:52:00 (229953): run_atlas exited; CPU time 33310.153028
11:52:00 (229953): called boinc_finish(0)

</stderr_txt>
]]>

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