Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:44:24 (2451564): wrapper (7.7.26015): starting
09:44:24 (2451564): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:44:24] Arguments: --nthreads 8
[2025-06-04 09:44:24] Threads: 8
[2025-06-04 09:44:24] Checking for CVMFS
[2025-06-04 09:44:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:44:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:44:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:44:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:44:24] 2.12.6.0 8763 32863 656048 146781 3 631 30108366 32935936 13601 16776704 0 462146699 99.683 367202892 37043 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:44:24] CVMFS is ok
[2025-06-04 09:44:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:44:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:44:24] Further information can be found at the LHC@home message board.
[2025-06-04 09:44:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:44:24] Checking for apptainer binary...
[2025-06-04 09:44:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:44:24] Running /usr/bin/apptainer --version
[2025-06-04 09:44:24] apptainer version 1.4.1-1.el9
[2025-06-04 09:44:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:44:24] c7-9-14.aglt2.org
[2025-06-04 09:44:24] apptainer works
[2025-06-04 09:44:24] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:44:24] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:44:24] Starting ATLAS job with PandaID=6679331254
[2025-06-04 09:44:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:22:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:22:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:22:07]  is_altstaged=None
[2025-06-04 10:22:07]  is_tar=False
[2025-06-04 10:22:07]  lfn=log.45006595._056145.job.log.tgz.1
[2025-06-04 10:22:07]  mtime=0
[2025-06-04 10:22:07]  protocol_id=None
[2025-06-04 10:22:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:22:07]  replicas=None
[2025-06-04 10:22:07]  scope=mc23_13p6TeV
[2025-06-04 10:22:07]  status=None
[2025-06-04 10:22:07]  status_code=0
[2025-06-04 10:22:07]  storage_token=
[2025-06-04 10:22:07]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6679331254/log.45006595._056145.job.log.tgz.1
[2025-06-04 10:22:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/10/log.45006595._056145.job.log.tgz.1
[2025-06-04 10:22:07]  workdir=None
[2025-06-04 10:22:07] ]
[2025-06-04 10:22:07] 2025-06-04 14:21:42,584 | INFO     | transferring file log.45006595._056145.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6679331254/log.45006595._056145.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:22:07] 2025-06-04 14:21:42,584 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6679331254/log.45006595._056145.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._056145.job
[2025-06-04 10:22:07] 2025-06-04 14:21:42,597 | INFO     | adding to output.list: log.45006595._056145.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/10/log.45006595._056145.job.log.tg
[2025-06-04 10:22:07] 2025-06-04 14:21:42,598 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:22:07] 2025-06-04 14:21:42,598 | INFO     | summary of transferred files:
[2025-06-04 10:22:07] 2025-06-04 14:21:42,598 | INFO     |  -- lfn=log.45006595._056145.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:22:07] 2025-06-04 14:21:42,598 | INFO     | stage-out finished correctly
[2025-06-04 10:22:07] 2025-06-04 14:21:42,633 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:22:07] 2025-06-04 14:21:43,338 | INFO     | monitor loop #170: job 0:6679331254 is in state 'finished'
[2025-06-04 10:22:07] 2025-06-04 14:21:43,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:22:07] 2025-06-04 14:21:44,762 | INFO     | job 6679331254 has state=finished
[2025-06-04 10:22:07] 2025-06-04 14:21:44,762 | INFO     | preparing for final server update for job 6679331254 in state='finished'
[2025-06-04 10:22:07] 2025-06-04 14:21:44,762 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:22:07] 2025-06-04 14:21:44,762 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:22:07] 2025-06-04 14:21:44,762 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:22:07] 2025-06-04 14:21:44,762 | INFO     | job 6679331254 has finished - writing final server update
[2025-06-04 10:22:07] 2025-06-04 14:21:44,763 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:22:07] 2025-06-04 14:21:44,779 | INFO     | executing command: lscpu
[2025-06-04 10:22:07] 2025-06-04 14:21:44,858 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:22:07] 2025-06-04 14:21:45,841 | INFO     | monitor loop #171: job 0:6679331254 is in state 'finished'
[2025-06-04 10:22:07] 2025-06-04 14:21:45,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:22:07] 2025-06-04 14:21:47,382 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:22:07] 2025-06-04 14:21:47,383 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679331254/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:22:07] 2025-06-04 14:21:47,383 | INFO     | extracted standard info from prmon json
[2025-06-04 10:22:07] 2025-06-04 14:21:47,383 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:22:07] 2025-06-04 14:21:47,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:22:07] 2025-06-04 14:21:47,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:22:07] 2025-06-04 14:21:47,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:22:07] 2025-06-04 14:21:47,384 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:22:07] 2025-06-04 14:21:47,384 | INFO     | sum of square deviations: 8362947.5
[2025-06-04 10:22:07] 2025-06-04 14:21:47,384 | INFO     | sum of deviations: 3513391380.0000005
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | mean x: 1749045882.5
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | mean y: 2202905.6666666665
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | -- intersect: -734796470265.4843
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | intersect: -734796470265.4843
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | chi2: 0.6260324062017557
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | -- intersect: -734796470265.4843
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | current memory leak: 420.11 B/s (using 30 data points, chi2=0.63)
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | ..............................
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | . Timing measurements:
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | . get job = 0 s
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | . initial setup = 2 s
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | . payload setup = 4 s
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | . stage-in = 0 s
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | . payload execution = 2209 s
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | . stage-out = 0 s
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | . log creation = 0 s
[2025-06-04 10:22:07] 2025-06-04 14:21:47,385 | INFO     | ..............................
[2025-06-04 10:22:07] 2025-06-04 14:21:47,425 | INFO     | 
[2025-06-04 10:22:07] 2025-06-04 14:21:47,425 | INFO     | job summary report
[2025-06-04 10:22:07] 2025-06-04 14:21:47,425 | INFO     | --------------------------------------------------
[2025-06-04 10:22:07] 2025-06-04 14:21:47,425 | INFO     | PanDA job id: 6679331254
[2025-06-04 10:22:07] 2025-06-04 14:21:47,425 | INFO     | task id: 45006595
[2025-06-04 10:22:07] 2025-06-04 14:21:47,425 | INFO     | errors: (none)
[2025-06-04 10:22:07] 2025-06-04 14:21:47,425 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:22:07] 2025-06-04 14:21:47,425 | INFO     | pilot state: finished 
[2025-06-04 10:22:07] 2025-06-04 14:21:47,425 | INFO     | transexitcode: 0
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | exeerrorcode: 0
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | exeerrordiag: 
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | exitcode: 0
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | exitmsg: OK
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | cpuconsumptiontime: 13493 s
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | nevents: 400
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | neventsw: 0
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | pid: 2462222
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | pgrp: 2462222
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | corecount: 8
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | event service: False
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | sizes: {0: 2397235, 3: 2397441, 10: 2397469, 2217: 2422567, 2218: 2431564, 2222: 2431678}
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | --------------------------------------------------
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | 
[2025-06-04 10:22:07] 2025-06-04 14:21:47,426 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,442 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:22:07] 2025-06-04 14:21:47,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,442 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:22:07] 2025-06-04 14:21:47,442 | INFO     | job 6679331254 has completed (purged errors)
[2025-06-04 10:22:07] 2025-06-04 14:21:47,442 | INFO     | overall cleanup function is called
[2025-06-04 10:22:07] 2025-06-04 14:21:48,448 | INFO     | --- collectZombieJob: --- 10, [2462222]
[2025-06-04 10:22:07] 2025-06-04 14:21:48,449 | INFO     | zombie collector waiting for pid 2462222
[2025-06-04 10:22:07] 2025-06-04 14:21:48,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:22:07] 2025-06-04 14:21:48,449 | INFO     | collected zombie processes
[2025-06-04 10:22:07] 2025-06-04 14:21:48,449 | INFO     | will attempt to kill all subprocesses of pid=2462222
[2025-06-04 10:22:07] 2025-06-04 14:21:48,641 | INFO     | process IDs to be killed: [2462222] (in reverse order)
[2025-06-04 10:22:07] 2025-06-04 14:21:48,734 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:22:07] 2025-06-04 14:21:48,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:22:07] 2025-06-04 14:21:48,747 | INFO     | did not find any defunct processes belonging to 2462222
[2025-06-04 10:22:07] 2025-06-04 14:21:48,755 | INFO     | did not find any defunct processes belonging to 2462222
[2025-06-04 10:22:07] 2025-06-04 14:21:48,755 | INFO     | ready for new job
[2025-06-04 10:22:07] 2025-06-04 14:21:48,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:22:07] 2025-06-04 14:21:48,756 | INFO     | **************************************
[2025-06-04 10:22:07] 2025-06-04 14:21:48,756 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:22:07] 2025-06-04 14:21:48,756 | INFO     | **************************************
[2025-06-04 10:22:07] 2025-06-04 14:21:48,756 | INFO     | 
[2025-06-04 10:22:07] 2025-06-04 14:21:48,772 | INFO     | architecture information:
[2025-06-04 10:22:07] 2025-06-04 14:21:48,772 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:22:07] 2025-06-04 14:21:48,782 | INFO     | cat /etc/os-release:
[2025-06-04 10:22:07] NAME="CentOS Linux"
[2025-06-04 10:22:07] VERSION="7 (Core)"
[2025-06-04 10:22:07] ID="centos"
[2025-06-04 10:22:07] ID_LIKE="rhel fedora"
[2025-06-04 10:22:07] VERSION_ID="7"
[2025-06-04 10:22:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:22:07] ANSI_COLOR="0;31"
[2025-06-04 10:22:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:22:07] HOME_URL="https://www.centos.org/"
[2025-06-04 10:22:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:22:07] 
[2025-06-04 10:22:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:22:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:22:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:22:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:22:07] 
[2025-06-04 10:22:07] 2025-06-04 14:21:48,783 | INFO     | **************************************
[2025-06-04 10:22:07] 2025-06-04 14:21:49,278 | INFO     | PID=2455203 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 10:22:07] 2025-06-04 14:21:49,278 | INFO     | .. there are 27 such processes running
[2025-06-04 10:22:07] 2025-06-04 14:21:49,285 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:22:07] 2025-06-04 14:21:49,297 | INFO     | sufficient remaining disk space (74788634624 B)
[2025-06-04 10:22:07] 2025-06-04 14:21:49,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:22:07] 2025-06-04 14:21:49,297 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:22:07] 2025-06-04 14:21:49,297 | INFO     | update_server=False
[2025-06-04 10:22:07] 2025-06-04 14:21:49,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:22:07] 2025-06-04 14:21:49,297 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:22:07] 2025-06-04 14:21:49,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:22:07] 2025-06-04 14:21:49,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:22:07] 2025-06-04 14:21:49,298 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:22:07] 2025-06-04 14:21:49,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:22:07] 2025-06-04 14:21:49,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:22:07] 2025-06-04 14:21:49,306 | INFO     | all data control threads have been joined
[2025-06-04 10:22:07] 2025-06-04 14:21:49,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:22:07] 2025-06-04 14:21:49,349 | INFO     | aborting loop
[2025-06-04 10:22:07] 2025-06-04 14:21:49,875 | INFO     | all payload control threads have been joined
[2025-06-04 10:22:07] 2025-06-04 14:21:50,181 | INFO     | all job control threads have been joined
[2025-06-04 10:22:07] 2025-06-04 14:21:50,303 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:50,303 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:50,311 | INFO     | [data] control thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:50,354 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:50,641 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:22:07] 2025-06-04 14:21:50,663 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:50,880 | INFO     | [payload] control thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:51,186 | INFO     | [job] control thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:51,217 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:51,223 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:51,284 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:51,297 | INFO     | [job] validate thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:51,414 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:51,690 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:52,647 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:21:53,304 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:22:00,221 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:22:07] 2025-06-04 14:22:01,226 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:22:07] 2025-06-04 14:22:01,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139923131533120)>', '<ExcThread(monitor, started 139922501523200)>']
[2025-06-04 10:22:07] 2025-06-04 14:22:02,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:22:07] 2025-06-04 14:22:02,363 | INFO     | [monitor] control thread has ended
[2025-06-04 10:22:07] 2025-06-04 14:22:06,797 | INFO     | all workflow threads have been joined
[2025-06-04 10:22:07] 2025-06-04 14:22:06,797 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:22:07] 2025-06-04 14:22:06,797 | INFO     | traces error code: 0
[2025-06-04 10:22:07] 2025-06-04 14:22:06,797 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:22:07] 2025-06-04 14:22:06,893 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:22:07] 2025-06-04 14:22:06,895 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:22:07] 2025-06-04 14:22:06,897 [wrapper] pilotpid: 2455203
[2025-06-04 10:22:07] 2025-06-04 14:22:06,898 [wrapper] Pilot exit status: 0
[2025-06-04 10:22:07] 2025-06-04 14:22:06,904 [wrapper] pandaids: 6679331254
[2025-06-04 10:22:07] 2025-06-04 14:22:06,966 [wrapper] cleanup supervisor_pilot 2599191 2455204
[2025-06-04 10:22:07] 2025-06-04 14:22:06,968 [wrapper] Test setup, not cleaning
[2025-06-04 10:22:07] 2025-06-04 14:22:06,970 [wrapper] apfmon messages muted
[2025-06-04 10:22:07] 2025-06-04 14:22:06,971 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:22:07] 2025-06-04 14:22:06,972 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:22:07]  *** Error codes and diagnostics ***
[2025-06-04 10:22:07]     "exeErrorCode": 0,
[2025-06-04 10:22:07]     "exeErrorDiag": "",
[2025-06-04 10:22:07]     "pilotErrorCode": 0,
[2025-06-04 10:22:07]     "pilotErrorDiag": "",
[2025-06-04 10:22:07]  *** Listing of results directory ***
[2025-06-04 10:22:07] total 391056
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:56 queuedata.json
[2025-06-04 10:22:07] -rwx------. 1 boincer umatlas     37140 Jun  4 04:57 runpilot2-wrapper.sh
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:22:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:44 run_atlas
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:44 job.xml
[2025-06-04 10:22:07] -rw-r--r--. 2 boincer umatlas 216022339 Jun  4 09:44 EVNT.45006593._000106.pool.root.1
[2025-06-04 10:22:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:44 start_atlas.sh
[2025-06-04 10:22:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:44 shared
[2025-06-04 10:22:07] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 09:44 input.tar.gz
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:44 boinc_lockfile
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas      2521 Jun  4 09:44 pandaJob.out
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas    986819 Jun  4 09:44 agis_schedconf.cvmfs.json
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:22:07] drwx------. 4 boincer umatlas      4096 Jun  4 09:44 pilot3
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 10:19 init_data.xml
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas        95 Jun  4 10:21 pilot_heartbeat.json
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas 179541487 Jun  4 10:21 HITS.45006595._056145.pool.root.1
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:21 boinc_task_state.xml
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas      1026 Jun  4 10:21 memory_monitor_summary.json
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas    276237 Jun  4 10:21 log.45006595._056145.job.log.tgz.1
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas      7681 Jun  4 10:21 heartbeat.json
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:22 boinc_mmap_file
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:22 wrapper_checkpoint.txt
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas      4943 Jun  4 10:22 pilotlog.txt
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas    249179 Jun  4 10:22 log.45006595._056145.job.log.1
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas       357 Jun  4 10:22 output.list
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:22 runtime_log
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas    542720 Jun  4 10:22 result.tar.gz
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas       645 Jun  4 10:22 xPCNDm26yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIsnKDmHfzOxm.diag
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 10:22 runtime_log.err
[2025-06-04 10:22:07] -rw-r--r--. 1 boincer umatlas     21413 Jun  4 10:22 stderr.txt
[2025-06-04 10:22:07] HITS file was successfully produced:
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas 179541487 Jun  4 10:21 shared/HITS.pool.root.1
[2025-06-04 10:22:07]  *** Contents of shared directory: ***
[2025-06-04 10:22:07] total 387348
[2025-06-04 10:22:07] -rw-r--r--. 2 boincer umatlas 216022339 Jun  4 09:44 ATLAS.root_0
[2025-06-04 10:22:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:44 start_atlas.sh
[2025-06-04 10:22:07] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 09:44 input.tar.gz
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas 179541487 Jun  4 10:21 HITS.pool.root.1
[2025-06-04 10:22:07] -rw-------. 1 boincer umatlas    542720 Jun  4 10:22 result.tar.gz
10:22:08 (2451564): run_atlas exited; CPU time 13525.178101
10:22:08 (2451564): called boinc_finish(0)

</stderr_txt>
]]>

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