Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:00:27 (5949): wrapper (7.7.26015): starting
05:00:27 (5949): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 05:00:27] Arguments: --nthreads 8
[2025-06-05 05:00:27] Threads: 8
[2025-06-05 05:00:27] Checking for CVMFS
[2025-06-05 05:00:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:00:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:00:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:00:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:00:30] 2.11.2.0 27578 34319 107520 146802 1 16 13523563 25165825 4295 130560 0 18892609 99.828 18622929 2326 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 05:00:30] CVMFS is ok
[2025-06-05 05:00:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:00:30] Checking for apptainer binary...
[2025-06-05 05:00:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:00:30] Running /usr/bin/apptainer --version
[2025-06-05 05:00:30] apptainer version 1.3.2-1.el7
[2025-06-05 05:00:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:00:32] cg-vwn227.simple-grid.lan
[2025-06-05 05:00:32] apptainer works
[2025-06-05 05:00:32] Set ATHENA_PROC_NUMBER=8
[2025-06-05 05:00:32] Set ATHENA_CORE_NUMBER=8
[2025-06-05 05:00:32] Starting ATLAS job with PandaID=6679227075
[2025-06-05 05:00:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 10:19:00]  *** The last 200 lines of the pilot log: ***
[2025-06-05 10:19:00] 2025-06-05 06:56:45,225 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6679227075/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 10:19:00] 2025-06-05 06:56:45,226 | INFO     | extracted standard info from prmon json
[2025-06-05 10:19:00] 2025-06-05 06:56:45,226 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 10:19:00] 2025-06-05 06:56:45,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 10:19:00] 2025-06-05 06:56:45,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 10:19:00] 2025-06-05 06:56:45,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 10:19:00] 2025-06-05 06:56:45,237 | INFO     | fitting pss+swap vs Time
[2025-06-05 10:19:00] 2025-06-05 06:56:45,238 | INFO     | sum of square deviations: 3301699115.0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,240 | INFO     | sum of deviations: 119405220064.0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,240 | INFO     | mean x: 1749099783.5
[2025-06-05 10:19:00] 2025-06-05 06:56:45,240 | INFO     | mean y: 2400943.9545454546
[2025-06-05 10:19:00] 2025-06-05 06:56:45,240 | INFO     | -- intersect: -63253406835.09932
[2025-06-05 10:19:00] 2025-06-05 06:56:45,240 | INFO     | intersect: -63253406835.09932
[2025-06-05 10:19:00] 2025-06-05 06:56:45,240 | INFO     | chi2: 7.970035793119461
[2025-06-05 10:19:00] 2025-06-05 06:56:45,241 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,242 | INFO     | sum of deviations: 130942548089.0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,243 | INFO     | mean x: 1749099631.0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,243 | INFO     | mean y: 2408753.4790697675
[2025-06-05 10:19:00] 2025-06-05 06:56:45,243 | INFO     | -- intersect: -74318485679.08498
[2025-06-05 10:19:00] 2025-06-05 06:56:45,243 | INFO     | intersect: -74318485679.08498
[2025-06-05 10:19:00] 2025-06-05 06:56:45,243 | INFO     | chi2: 7.2614502524316205
[2025-06-05 10:19:00] 2025-06-05 06:56:45,244 | INFO     | current chi2=7.2614502524316205 (change=8.890619303109819 %)
[2025-06-05 10:19:00] 2025-06-05 06:56:45,244 | INFO     | right removable region: 214
[2025-06-05 10:19:00] 2025-06-05 06:56:45,244 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,246 | INFO     | sum of deviations: 43789037940.99999
[2025-06-05 10:19:00] 2025-06-05 06:56:45,246 | INFO     | mean x: 1749099936.0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,246 | INFO     | mean y: 2453313.334883721
[2025-06-05 10:19:00] 2025-06-05 06:56:45,246 | INFO     | -- intersect: -24851508069.782955
[2025-06-05 10:19:00] 2025-06-05 06:56:45,247 | INFO     | intersect: -24851508069.782955
[2025-06-05 10:19:00] 2025-06-05 06:56:45,247 | INFO     | chi2: 2.9777643661997883
[2025-06-05 10:19:00] 2025-06-05 06:56:45,247 | INFO     | current chi2=2.9777643661997883 (change=62.63800510443761 %)
[2025-06-05 10:19:00] 2025-06-05 06:56:45,248 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 10:19:00] 2025-06-05 06:56:45,256 | INFO     | sum of deviations: -3903217827.5
[2025-06-05 10:19:00] 2025-06-05 06:56:45,257 | INFO     | mean x: 1749100088.5
[2025-06-05 10:19:00] 2025-06-05 06:56:45,257 | INFO     | mean y: 2487789.8523809523
[2025-06-05 10:19:00] 2025-06-05 06:56:45,257 | INFO     | -- intersect: 2379935590.5956883
[2025-06-05 10:19:00] 2025-06-05 06:56:45,257 | INFO     | intersect: 2379935590.5956883
[2025-06-05 10:19:00] 2025-06-05 06:56:45,257 | INFO     | chi2: 0.9430295597310743
[2025-06-05 10:19:00] 2025-06-05 06:56:45,258 | INFO     | current chi2=0.9430295597310743 (change=68.33095424086343 %)
[2025-06-05 10:19:00] 2025-06-05 06:56:45,258 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,259 | INFO     | sum of deviations: -16444600881.000002
[2025-06-05 10:19:00] 2025-06-05 06:56:45,260 | INFO     | mean x: 1749100241.0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,260 | INFO     | mean y: 2497321.5024390244
[2025-06-05 10:19:00] 2025-06-05 06:56:45,260 | INFO     | -- intersect: 10769835765.01145
[2025-06-05 10:19:00] 2025-06-05 06:56:45,260 | INFO     | intersect: 10769835765.01145
[2025-06-05 10:19:00] 2025-06-05 06:56:45,260 | INFO     | chi2: 0.8051220826974985
[2025-06-05 10:19:00] 2025-06-05 06:56:45,260 | INFO     | current chi2=0.8051220826974985 (change=14.623876379114046 %)
[2025-06-05 10:19:00] 2025-06-05 06:56:45,260 | INFO     | left removable region: 30
[2025-06-05 10:19:00] 2025-06-05 06:56:45,261 | INFO     | sum of square deviations: 1931608310.0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,262 | INFO     | sum of deviations: -2996967576.0000005
[2025-06-05 10:19:00] 2025-06-05 06:56:45,262 | INFO     | mean x: 1749100515.5
[2025-06-05 10:19:00] 2025-06-05 06:56:45,262 | INFO     | mean y: 2508359.413043478
[2025-06-05 10:19:00] 2025-06-05 06:56:45,262 | INFO     | -- intersect: 2716307790.167401
[2025-06-05 10:19:00] 2025-06-05 06:56:45,263 | INFO     | intersect: 2716307790.167401
[2025-06-05 10:19:00] 2025-06-05 06:56:45,263 | INFO     | chi2: 0.009782482224845353
[2025-06-05 10:19:00] 2025-06-05 06:56:45,263 | INFO     | -- intersect: 2716307790.167401
[2025-06-05 10:19:00] 2025-06-05 06:56:45,263 | INFO     | current memory leak: -1.55 B/s (using 184 data points, chi2=0.01)
[2025-06-05 10:19:00] 2025-06-05 06:56:45,264 | INFO     | ..............................
[2025-06-05 10:19:00] 2025-06-05 06:56:45,264 | INFO     | . Timing measurements:
[2025-06-05 10:19:00] 2025-06-05 06:56:45,264 | INFO     | . get job = 0 s
[2025-06-05 10:19:00] 2025-06-05 06:56:45,264 | INFO     | . initial setup = 7 s
[2025-06-05 10:19:00] 2025-06-05 06:56:45,265 | INFO     | . payload setup = 157 s
[2025-06-05 10:19:00] 2025-06-05 06:56:45,265 | INFO     | . stage-in = 0 s
[2025-06-05 10:19:00] 2025-06-05 06:56:45,265 | INFO     | . payload execution = 13532 s
[2025-06-05 10:19:00] 2025-06-05 06:56:45,265 | INFO     | . stage-out = 4 s
[2025-06-05 10:19:00] 2025-06-05 06:56:45,265 | INFO     | . log creation = 1 s
[2025-06-05 10:19:00] 2025-06-05 06:56:45,265 | INFO     | ..............................
[2025-06-05 10:19:00] 2025-06-05 06:56:45,425 | INFO     | 
[2025-06-05 10:19:00] 2025-06-05 06:56:45,426 | INFO     | job summary report
[2025-06-05 10:19:00] 2025-06-05 06:56:45,426 | INFO     | --------------------------------------------------
[2025-06-05 10:19:00] 2025-06-05 06:56:45,426 | INFO     | PanDA job id: 6679227075
[2025-06-05 10:19:00] 2025-06-05 06:56:45,426 | INFO     | task id: 45006595
[2025-06-05 10:19:00] 2025-06-05 06:56:45,426 | INFO     | errors: (none)
[2025-06-05 10:19:00] 2025-06-05 06:56:45,426 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 10:19:00] 2025-06-05 06:56:45,427 | INFO     | pilot state: finished 
[2025-06-05 10:19:00] 2025-06-05 06:56:45,427 | INFO     | transexitcode: 0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,427 | INFO     | exeerrorcode: 0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,427 | INFO     | exeerrordiag: 
[2025-06-05 10:19:00] 2025-06-05 06:56:45,427 | INFO     | exitcode: 0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,427 | INFO     | exitmsg: OK
[2025-06-05 10:19:00] 2025-06-05 06:56:45,427 | INFO     | cpuconsumptiontime: 49822 s
[2025-06-05 10:19:00] 2025-06-05 06:56:45,427 | INFO     | nevents: 400
[2025-06-05 10:19:00] 2025-06-05 06:56:45,427 | INFO     | neventsw: 0
[2025-06-05 10:19:00] 2025-06-05 06:56:45,427 | INFO     | pid: 18688
[2025-06-05 10:19:00] 2025-06-05 06:56:45,428 | INFO     | pgrp: 18688
[2025-06-05 10:19:00] 2025-06-05 06:56:45,428 | INFO     | corecount: 8
[2025-06-05 10:19:00] 2025-06-05 06:56:45,428 | INFO     | event service: False
[2025-06-05 10:19:00] 2025-06-05 06:56:45,428 | INFO     | sizes: {0: 2396462, 1: 2397147, 2: 2397346, 13: 2397346, 23: 2397402, 34: 2397430, 45: 2397586, 56: 2397614, 66: 2397642, 77: 2397670, 88: 2397872, 89: 2398240, 99
[2025-06-05 10:19:00] 2025-06-05 06:56:45,428 | INFO     | --------------------------------------------------
[2025-06-05 10:19:00] 2025-06-05 06:56:45,428 | INFO     | 
[2025-06-05 10:19:00] 2025-06-05 06:56:45,428 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 10:19:00] 2025-06-05 06:56:45,897 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,898 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,898 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,898 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,899 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 10:19:00] 2025-06-05 06:56:45,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,899 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 10:19:00] 2025-06-05 06:56:45,900 | INFO     | job 6679227075 has completed (purged errors)
[2025-06-05 10:19:00] 2025-06-05 06:56:45,900 | INFO     | overall cleanup function is called
[2025-06-05 10:19:00] 2025-06-05 06:56:46,909 | INFO     | --- collectZombieJob: --- 10, [18688]
[2025-06-05 10:19:00] 2025-06-05 06:56:46,910 | INFO     | zombie collector waiting for pid 18688
[2025-06-05 10:19:00] 2025-06-05 06:56:46,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 10:19:00] 2025-06-05 06:56:46,910 | INFO     | collected zombie processes
[2025-06-05 10:19:00] 2025-06-05 06:56:46,910 | INFO     | will attempt to kill all subprocesses of pid=18688
[2025-06-05 10:19:00] 2025-06-05 06:56:47,032 | INFO     | process IDs to be killed: [18688] (in reverse order)
[2025-06-05 10:19:00] 2025-06-05 06:56:47,473 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 10:19:00] 2025-06-05 06:56:47,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 10:19:00] 2025-06-05 06:56:47,477 | INFO     | did not find any defunct processes belonging to 18688
[2025-06-05 10:19:00] 2025-06-05 06:56:47,481 | INFO     | did not find any defunct processes belonging to 18688
[2025-06-05 10:19:00] 2025-06-05 06:56:47,482 | INFO     | ready for new job
[2025-06-05 10:19:00] 2025-06-05 06:56:47,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 10:19:00] 2025-06-05 06:56:47,484 | INFO     | **************************************
[2025-06-05 10:19:00] 2025-06-05 06:56:47,485 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 10:19:00] 2025-06-05 06:56:47,485 | INFO     | **************************************
[2025-06-05 10:19:00] 2025-06-05 06:56:47,485 | INFO     | 
[2025-06-05 10:19:00] 2025-06-05 06:56:47,485 | INFO     | pilot is running in a VM
[2025-06-05 10:19:00] 2025-06-05 06:56:47,486 | INFO     | architecture information:
[2025-06-05 10:19:00] 2025-06-05 06:56:47,494 | INFO     | executing command: cat /etc/os-release
[2025-06-05 10:19:00] 2025-06-05 06:56:47,573 | INFO     | cat /etc/os-release:
[2025-06-05 10:19:00] NAME="CentOS Linux"
[2025-06-05 10:19:00] VERSION="7 (Core)"
[2025-06-05 10:19:00] ID="centos"
[2025-06-05 10:19:00] ID_LIKE="rhel fedora"
[2025-06-05 10:19:00] VERSION_ID="7"
[2025-06-05 10:19:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 10:19:00] ANSI_COLOR="0;31"
[2025-06-05 10:19:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 10:19:00] HOME_URL="https://www.centos.org/"
[2025-06-05 10:19:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 10:19:00] 
[2025-06-05 10:19:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 10:19:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 10:19:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 10:19:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 10:19:00] 
[2025-06-05 10:19:00] 2025-06-05 06:56:47,574 | INFO     | **************************************
[2025-06-05 10:19:00] 2025-06-05 06:56:48,077 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 10:19:00] 2025-06-05 06:56:48,286 | INFO     | sufficient remaining disk space (497041801216 B)
[2025-06-05 10:19:00] 2025-06-05 06:56:48,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 10:19:00] 2025-06-05 06:56:48,287 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 10:19:00] 2025-06-05 06:56:48,287 | INFO     | update_server=False
[2025-06-05 10:19:00] 2025-06-05 06:56:48,287 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 10:19:00] 2025-06-05 06:56:48,294 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 10:19:00] 2025-06-05 06:56:48,517 | INFO     | all payload control threads have been joined
[2025-06-05 10:19:00] 2025-06-05 06:56:48,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 10:19:00] 2025-06-05 06:56:48,721 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:19:00] 2025-06-05 06:56:48,722 | INFO     | aborting loop
[2025-06-05 10:19:00] 2025-06-05 06:56:48,738 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 10:19:00] 2025-06-05 06:56:48,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 10:19:00] 2025-06-05 06:56:48,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 10:19:00] 2025-06-05 06:56:48,993 | INFO     | all data control threads have been joined
[2025-06-05 10:19:00] 2025-06-05 06:56:49,293 | INFO     | [job] retrieve thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:49,516 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:49,524 | INFO     | [payload] control thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:49,728 | INFO     | [job] job monitor thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:49,822 | INFO     | all job control threads have been joined
[2025-06-05 10:19:00] 2025-06-05 06:56:49,826 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:50,000 | INFO     | [data] control thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:50,035 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:50,109 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:50,301 | INFO     | [data] copytool_out thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:50,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:19:00] 2025-06-05 06:56:50,442 | INFO     | [job] validate thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:50,454 | INFO     | [data] copytool_in thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:50,634 | INFO     | [payload] failed_post thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:50,648 | INFO     | [payload] validate_post thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:50,829 | INFO     | [job] control thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:51,448 | INFO     | [job] queue monitor thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:52,712 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 10:19:00] 2025-06-05 06:56:53,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140329248241472)>', '<ExcThread(monitor, started 140328585651968)>']
[2025-06-05 10:19:00] 2025-06-05 06:56:53,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 10:19:00] 2025-06-05 06:56:53,769 | INFO     | [monitor] control thread has ended
[2025-06-05 10:19:00] 2025-06-05 06:56:58,292 | INFO     | all workflow threads have been joined
[2025-06-05 10:19:00] 2025-06-05 06:56:58,293 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 10:19:00] 2025-06-05 06:56:58,293 | INFO     | traces error code: 0
[2025-06-05 10:19:00] 2025-06-05 06:56:58,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 10:19:00] 2025-06-05 06:56:58,555 [wrapper] ==== pilot stdout END ====
[2025-06-05 10:19:00] 2025-06-05 06:56:58,617 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 10:19:00] 2025-06-05 06:56:58,721 [wrapper] pilotpid: 9896
[2025-06-05 10:19:00] 2025-06-05 06:56:58,819 [wrapper] Pilot exit status: 0
[2025-06-05 10:19:00] 2025-06-05 06:56:59,196 [wrapper] pandaids: 6679227075
[2025-06-05 10:19:00] 2025-06-05 06:57:00,263 [wrapper] cleanup supervisor_pilot 28863 9897
[2025-06-05 10:19:00] 2025-06-05 06:57:00,381 [wrapper] Test setup, not cleaning
[2025-06-05 10:19:00] 2025-06-05 06:57:00,435 [wrapper] apfmon messages muted
[2025-06-05 10:19:00] 2025-06-05 06:57:00,514 [wrapper] ==== wrapper stdout END ====
[2025-06-05 10:19:00] 2025-06-05 06:57:00,583 [wrapper] ==== wrapper stderr END ====
[2025-06-05 10:19:00]  *** Error codes and diagnostics ***
[2025-06-05 10:19:00]     "exeErrorCode": 0,
[2025-06-05 10:19:00]     "exeErrorDiag": "",
[2025-06-05 10:19:00]     "pilotErrorCode": 0,
[2025-06-05 10:19:00]     "pilotErrorDiag": "",
[2025-06-05 10:19:00]  *** Listing of results directory ***
[2025-06-05 10:19:00] total 388700
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 10:19:00] -rwx------. 1 boinc boinc     37140 Jun  4 10:54 runpilot2-wrapper.sh
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc      5111 Jun  4 10:54 queuedata.json
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc       100 Jun  5 05:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 10:19:00] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 05:00 run_atlas
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc       105 Jun  5 05:00 job.xml
[2025-06-05 10:19:00] -rw-r--r--. 2 boinc boinc 213337053 Jun  5 05:00 EVNT.45006593._000647.pool.root.1
[2025-06-05 10:19:00] -rw-r--r--. 2 boinc boinc    508888 Jun  5 05:00 input.tar.gz
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc      6392 Jun  5 05:00 init_data.xml
[2025-06-05 10:19:00] -rw-r--r--. 2 boinc boinc     15093 Jun  5 05:00 start_atlas.sh
[2025-06-05 10:19:00] drwxrwx--x. 2 boinc boinc        68 Jun  5 05:00 shared
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc         0 Jun  5 05:00 boinc_lockfile
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc      2524 Jun  5 05:00 pandaJob.out
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc    987109 Jun  5 05:03 agis_schedconf.cvmfs.json
[2025-06-05 10:19:00] drwx------. 4 boinc boinc      4096 Jun  5 05:03 pilot3
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc 177739771 Jun  5 08:53 HITS.45006595._056014.pool.root.1
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc       531 Jun  5 08:53 boinc_task_state.xml
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc      1014 Jun  5 08:54 memory_monitor_summary.json
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc   1598969 Jun  5 08:55 agis_ddmendpoints.agis.ALL.json
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc    373356 Jun  5 08:55 log.45006595._056014.job.log.tgz.1
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc        95 Jun  5 08:56 pilot_heartbeat.json
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc      7689 Jun  5 08:56 heartbeat.json
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc      4416 Jun  5 08:56 pilotlog.txt
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc   1189622 Jun  5 08:57 log.45006595._056014.job.log.1
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc       357 Jun  5 08:57 output.list
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc       620 Jun  5 08:57 runtime_log
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc   1587200 Jun  5 08:57 result.tar.gz
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc      8659 Jun  5 08:57 runtime_log.err
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc       657 Jun  5 08:57 h67KDm73yg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmzaKDmAikQ6n.diag
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc      8192 Jun  5 10:18 boinc_mmap_file
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc        28 Jun  5 10:19 wrapper_checkpoint.txt
[2025-06-05 10:19:00] -rw-r--r--. 1 boinc boinc     20527 Jun  5 10:19 stderr.txt
[2025-06-05 10:19:00] HITS file was successfully produced:
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc 177739771 Jun  5 08:53 shared/HITS.pool.root.1
[2025-06-05 10:19:00]  *** Contents of shared directory: ***
[2025-06-05 10:19:00] total 383984
[2025-06-05 10:19:00] -rw-r--r--. 2 boinc boinc 213337053 Jun  5 05:00 ATLAS.root_0
[2025-06-05 10:19:00] -rw-r--r--. 2 boinc boinc    508888 Jun  5 05:00 input.tar.gz
[2025-06-05 10:19:00] -rw-r--r--. 2 boinc boinc     15093 Jun  5 05:00 start_atlas.sh
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc 177739771 Jun  5 08:53 HITS.pool.root.1
[2025-06-05 10:19:00] -rw-------. 1 boinc boinc   1587200 Jun  5 08:57 result.tar.gz
10:19:02 (5949): run_atlas exited; CPU time 49994.775138
10:19:02 (5949): called boinc_finish(0)

</stderr_txt>
]]>

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