Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:00:59 (23965): wrapper (7.7.26015): starting
12:00:59 (23965): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 12:00:59] Arguments: --nthreads 12
[2025-06-04 12:00:59] Threads: 12
[2025-06-04 12:00:59] Checking for CVMFS
[2025-06-04 12:00:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:00:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:00:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:01:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:01:00] 2.10.0.0 29567 2782 110840 146788 1 187 15224953 16777216 878 130560 0 11340442 99.998 701912 7161 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-04 12:01:00] CVMFS is ok
[2025-06-04 12:01:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:01:00] Checking for apptainer binary...
[2025-06-04 12:01:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:01:00] Running /usr/bin/apptainer --version
[2025-06-04 12:01:00] apptainer version 1.3.6-150600.4.9.1
[2025-06-04 12:01:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:01:00] boinc-runner
[2025-06-04 12:01:00] apptainer works
[2025-06-04 12:01:00] Set ATHENA_PROC_NUMBER=12
[2025-06-04 12:01:00] Set ATHENA_CORE_NUMBER=12
[2025-06-04 12:01:00] Starting ATLAS job with PandaID=6678998847
[2025-06-04 12:01:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:29:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:29:41]  filetype=log
[2025-06-04 12:29:41]  guid=0528fe24-4d55-4c13-9388-37060115d0e8
[2025-06-04 12:29:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:29:41]  is_altstaged=None
[2025-06-04 12:29:41]  is_tar=False
[2025-06-04 12:29:41]  lfn=log.45006595._055760.job.log.tgz.1
[2025-06-04 12:29:41]  mtime=0
[2025-06-04 12:29:41]  protocol_id=None
[2025-06-04 12:29:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:29:41]  replicas=None
[2025-06-04 12:29:41]  scope=mc23_13p6TeV
[2025-06-04 12:29:41]  status=None
[2025-06-04 12:29:41]  status_code=0
[2025-06-04 12:29:41]  storage_token=
[2025-06-04 12:29:41]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678998847/log.45006595._055760.job.log.tgz.1
[2025-06-04 12:29:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/71/log.45006595._055760.job.log.tgz.1
[2025-06-04 12:29:41]  workdir=None
[2025-06-04 12:29:41] ]
[2025-06-04 12:29:41] 2025-06-04 17:29:24,633 | INFO     | transferring file log.45006595._055760.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678998847/log.45006595._055760.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 12:29:41] 2025-06-04 17:29:24,634 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678998847/log.45006595._055760.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._055760.job
[2025-06-04 12:29:41] 2025-06-04 17:29:24,642 | INFO     | adding to output.list: log.45006595._055760.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/71/log.45006595._055760.job.log.tg
[2025-06-04 12:29:41] 2025-06-04 17:29:24,642 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:29:41] 2025-06-04 17:29:24,642 | INFO     | summary of transferred files:
[2025-06-04 12:29:41] 2025-06-04 17:29:24,642 | INFO     |  -- lfn=log.45006595._055760.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:29:41] 2025-06-04 17:29:24,642 | INFO     | stage-out finished correctly
[2025-06-04 12:29:41] 2025-06-04 17:29:24,679 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:29:41] 2025-06-04 17:29:25,530 | INFO     | job 6678998847 has state=finished
[2025-06-04 12:29:41] 2025-06-04 17:29:25,530 | INFO     | preparing for final server update for job 6678998847 in state='finished'
[2025-06-04 12:29:41] 2025-06-04 17:29:25,531 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:29:41] 2025-06-04 17:29:25,531 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:29:41] 2025-06-04 17:29:25,531 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:29:41] 2025-06-04 17:29:25,531 | INFO     | job 6678998847 has finished - writing final server update
[2025-06-04 12:29:41] 2025-06-04 17:29:25,531 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:29:41] 2025-06-04 17:29:25,533 | INFO     | executing command: lscpu
[2025-06-04 12:29:41] 2025-06-04 17:29:25,551 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:29:41] 2025-06-04 17:29:27,823 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:29:41] 2025-06-04 17:29:27,823 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678998847/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:29:41] 2025-06-04 17:29:27,824 | INFO     | extracted standard info from prmon json
[2025-06-04 12:29:41] 2025-06-04 17:29:27,824 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:29:41] 2025-06-04 17:29:27,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:29:41] 2025-06-04 17:29:27,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:29:41] 2025-06-04 17:29:27,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:29:41] 2025-06-04 17:29:27,824 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:29:41] 2025-06-04 17:29:27,824 | INFO     | sum of square deviations: 2865170.0
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | sum of deviations: -627208405.0
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | mean x: 1749057401.0
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | mean y: 2782752.8571428573
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | -- intersect: 382885300277.00244
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | intersect: 382885300277.00244
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | chi2: 0.007999248964560944
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | -- intersect: 382885300277.00244
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | current memory leak: -218.91 B/s (using 21 data points, chi2=0.01)
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | ..............................
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | . Timing measurements:
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | . get job = 0 s
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | . initial setup = 3 s
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | . payload setup = 3 s
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | . stage-in = 0 s
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | . payload execution = 1676 s
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | . stage-out = 0 s
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | . log creation = 0 s
[2025-06-04 12:29:41] 2025-06-04 17:29:27,825 | INFO     | ..............................
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | 
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | job summary report
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | --------------------------------------------------
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | PanDA job id: 6678998847
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | task id: 45006595
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | errors: (none)
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | pilot state: finished 
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | transexitcode: 0
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | exeerrorcode: 0
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | exeerrordiag: 
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | exitcode: 0
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | exitmsg: OK
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | cpuconsumptiontime: 18240 s
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | nevents: 400
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | neventsw: 0
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | pid: 2571
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | pgrp: 2571
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | corecount: 12
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | event service: False
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | sizes: {0: 2397291, 2: 2397497, 11: 2397525, 1683: 2422339, 1684: 2431336, 1687: 2431450}
[2025-06-04 12:29:41] 2025-06-04 17:29:28,245 | INFO     | --------------------------------------------------
[2025-06-04 12:29:41] 2025-06-04 17:29:28,246 | INFO     | 
[2025-06-04 12:29:41] 2025-06-04 17:29:28,246 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 12:29:41] 2025-06-04 17:29:28,260 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,260 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,260 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,260 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,262 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:29:41] 2025-06-04 17:29:28,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,262 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:29:41] 2025-06-04 17:29:28,262 | INFO     | job 6678998847 has completed (purged errors)
[2025-06-04 12:29:41] 2025-06-04 17:29:28,262 | INFO     | overall cleanup function is called
[2025-06-04 12:29:41] 2025-06-04 17:29:29,271 | INFO     | --- collectZombieJob: --- 10, [2571]
[2025-06-04 12:29:41] 2025-06-04 17:29:29,271 | INFO     | zombie collector waiting for pid 2571
[2025-06-04 12:29:41] 2025-06-04 17:29:29,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:29:41] 2025-06-04 17:29:29,271 | INFO     | collected zombie processes
[2025-06-04 12:29:41] 2025-06-04 17:29:29,271 | INFO     | will attempt to kill all subprocesses of pid=2571
[2025-06-04 12:29:41] 2025-06-04 17:29:29,315 | INFO     | process IDs to be killed: [2571] (in reverse order)
[2025-06-04 12:29:41] 2025-06-04 17:29:29,339 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:29:41] 2025-06-04 17:29:29,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:29:41] 2025-06-04 17:29:29,342 | INFO     | did not find any defunct processes belonging to 2571
[2025-06-04 12:29:41] 2025-06-04 17:29:29,344 | INFO     | did not find any defunct processes belonging to 2571
[2025-06-04 12:29:41] 2025-06-04 17:29:29,344 | INFO     | ready for new job
[2025-06-04 12:29:41] 2025-06-04 17:29:29,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:29:41] 2025-06-04 17:29:29,345 | INFO     | **************************************
[2025-06-04 12:29:41] 2025-06-04 17:29:29,345 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:29:41] 2025-06-04 17:29:29,345 | INFO     | **************************************
[2025-06-04 12:29:41] 2025-06-04 17:29:29,345 | INFO     | 
[2025-06-04 12:29:41] 2025-06-04 17:29:29,346 | INFO     | architecture information:
[2025-06-04 12:29:41] 2025-06-04 17:29:29,346 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:29:41] 2025-06-04 17:29:29,356 | INFO     | cat /etc/os-release:
[2025-06-04 12:29:41] NAME="CentOS Linux"
[2025-06-04 12:29:41] VERSION="7 (Core)"
[2025-06-04 12:29:41] ID="centos"
[2025-06-04 12:29:41] ID_LIKE="rhel fedora"
[2025-06-04 12:29:41] VERSION_ID="7"
[2025-06-04 12:29:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:29:41] ANSI_COLOR="0;31"
[2025-06-04 12:29:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:29:41] HOME_URL="https://www.centos.org/"
[2025-06-04 12:29:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:29:41] 
[2025-06-04 12:29:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:29:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:29:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:29:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:29:41] 
[2025-06-04 12:29:41] 2025-06-04 17:29:29,356 | INFO     | **************************************
[2025-06-04 12:29:41] 2025-06-04 17:29:29,859 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 12:29:41] 2025-06-04 17:29:29,870 | INFO     | sufficient remaining disk space (3891316916224 B)
[2025-06-04 12:29:41] 2025-06-04 17:29:29,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:29:41] 2025-06-04 17:29:29,871 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:29:41] 2025-06-04 17:29:29,871 | INFO     | update_server=False
[2025-06-04 12:29:41] 2025-06-04 17:29:29,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:29:41] 2025-06-04 17:29:29,871 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:29:41] 2025-06-04 17:29:29,871 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:29:41] 2025-06-04 17:29:29,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:29:41] 2025-06-04 17:29:29,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:29:41] 2025-06-04 17:29:30,046 | INFO     | all payload control threads have been joined
[2025-06-04 12:29:41] 2025-06-04 17:29:30,138 | INFO     | all data control threads have been joined
[2025-06-04 12:29:41] 2025-06-04 17:29:30,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:29:41] 2025-06-04 17:29:30,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:29:41] 2025-06-04 17:29:30,874 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:30,979 | WARNING  | process 2571 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:29:41] 2025-06-04 17:29:31,004 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:29:41] 2025-06-04 17:29:31,040 | INFO     | number of running child processes to parent process 2571: 1
[2025-06-04 12:29:41] 2025-06-04 17:29:31,040 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:29:41] 2025-06-04 17:29:31,040 | INFO     | aborting job monitoring since job object (job id=6678998847) has expired
[2025-06-04 12:29:41] 2025-06-04 17:29:31,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:29:41] 2025-06-04 17:29:31,040 | INFO     | will abort loop
[2025-06-04 12:29:41] 2025-06-04 17:29:31,050 | INFO     | [payload] control thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:31,143 | INFO     | [data] control thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:31,188 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:31,189 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:31,339 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:31,445 | INFO     | all job control threads have been joined
[2025-06-04 12:29:41] 2025-06-04 17:29:31,480 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:31,515 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:31,761 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:32,046 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:32,158 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:32,159 | INFO     | [job] validate thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:32,190 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:32,450 | INFO     | [job] control thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:32,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:29:41] 2025-06-04 17:29:33,865 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:34,714 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:29:41] 2025-06-04 17:29:36,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907284424512)>', '<ExcThread(monitor, started 139906638653184)>']
[2025-06-04 12:29:41] 2025-06-04 17:29:36,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:29:41] 2025-06-04 17:29:36,907 | INFO     | [monitor] control thread has ended
[2025-06-04 12:29:41] 2025-06-04 17:29:41,318 | INFO     | all workflow threads have been joined
[2025-06-04 12:29:41] 2025-06-04 17:29:41,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:29:41] 2025-06-04 17:29:41,318 | INFO     | traces error code: 0
[2025-06-04 12:29:41] 2025-06-04 17:29:41,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:29:41] 2025-06-04 17:29:41,375 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:29:41] 2025-06-04 17:29:41,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:29:41] 2025-06-04 17:29:41,379 [wrapper] pilotpid: 27794
[2025-06-04 12:29:41] 2025-06-04 17:29:41,380 [wrapper] Pilot exit status: 0
[2025-06-04 12:29:41] 2025-06-04 17:29:41,390 [wrapper] pandaids: 6678998847
[2025-06-04 12:29:41] 2025-06-04 17:29:41,407 [wrapper] cleanup supervisor_pilot 18460 27795
[2025-06-04 12:29:41] 2025-06-04 17:29:41,409 [wrapper] Test setup, not cleaning
[2025-06-04 12:29:41] 2025-06-04 17:29:41,411 [wrapper] apfmon messages muted
[2025-06-04 12:29:41] 2025-06-04 17:29:41,413 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:29:41] 2025-06-04 17:29:41,415 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:29:41]  *** Error codes and diagnostics ***
[2025-06-04 12:29:41]     "exeErrorCode": 0,
[2025-06-04 12:29:41]     "exeErrorDiag": "",
[2025-06-04 12:29:41]     "pilotErrorCode": 0,
[2025-06-04 12:29:41]     "pilotErrorDiag": "",
[2025-06-04 12:29:41]  *** Listing of results directory ***
[2025-06-04 12:29:41] total 392992
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc    495897 Jun  4 03:31 pilot3.tar.gz
[2025-06-04 12:29:41] -rwx------ 1 boinc boinc     37140 Jun  4 03:38 runpilot2-wrapper.sh
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc      5111 Jun  4 03:38 queuedata.json
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:29:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:00 run_atlas
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:00 job.xml
[2025-06-04 12:29:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:00 start_atlas.sh
[2025-06-04 12:29:41] drwxrwx--x 1 boinc boinc        76 Jun  4 12:00 shared
[2025-06-04 12:29:41] -rw-r--r-- 2 boinc boinc    508881 Jun  4 12:00 input.tar.gz
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc     10044 Jun  4 12:00 init_data.xml
[2025-06-04 12:29:41] -rw-r--r-- 2 boinc boinc 217690332 Jun  4 12:00 EVNT.45006593._001292.pool.root.1
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:00 boinc_lockfile
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc      2524 Jun  4 12:01 pandaJob.out
[2025-06-04 12:29:41] -rw------- 1 boinc boinc    990984 Jun  4 12:01 agis_schedconf.cvmfs.json
[2025-06-04 12:29:41] -rw------- 1 boinc boinc   1598969 Jun  4 12:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:29:41] drwx------ 1 boinc boinc       368 Jun  4 12:01 pilot3
[2025-06-04 12:29:41] -rw------- 1 boinc boinc 179809843 Jun  4 12:29 HITS.45006595._055760.pool.root.1
[2025-06-04 12:29:41] -rw------- 1 boinc boinc        95 Jun  4 12:29 pilot_heartbeat.json
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc       529 Jun  4 12:29 boinc_task_state.xml
[2025-06-04 12:29:41] -rw------- 1 boinc boinc      1022 Jun  4 12:29 memory_monitor_summary.json
[2025-06-04 12:29:41] -rw------- 1 boinc boinc    347852 Jun  4 12:29 log.45006595._055760.job.log.tgz.1
[2025-06-04 12:29:41] -rw------- 1 boinc boinc      7689 Jun  4 12:29 heartbeat.json
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:29 boinc_mmap_file
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc        27 Jun  4 12:29 wrapper_checkpoint.txt
[2025-06-04 12:29:41] -rw------- 1 boinc boinc      4993 Jun  4 12:29 pilotlog.txt
[2025-06-04 12:29:41] -rw------- 1 boinc boinc    202400 Jun  4 12:29 log.45006595._055760.job.log.1
[2025-06-04 12:29:41] -rw------- 1 boinc boinc       357 Jun  4 12:29 output.list
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:29 runtime_log
[2025-06-04 12:29:41] -rw------- 1 boinc boinc    573440 Jun  4 12:29 result.tar.gz
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc      8683 Jun  4 12:29 runtime_log.err
[2025-06-04 12:29:41] -rw------- 1 boinc boinc       653 Jun  4 12:29 hdAODmioyg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTyaKDmBy739n.diag
[2025-06-04 12:29:41] -rw-r--r-- 1 boinc boinc     20872 Jun  4 12:29 stderr.txt
[2025-06-04 12:29:41] HITS file was successfully produced:
[2025-06-04 12:29:41] -rw------- 1 boinc boinc 179809843 Jun  4 12:29 shared/HITS.pool.root.1
[2025-06-04 12:29:41]  *** Contents of shared directory: ***
[2025-06-04 12:29:41] total 389264
[2025-06-04 12:29:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:00 start_atlas.sh
[2025-06-04 12:29:41] -rw-r--r-- 2 boinc boinc    508881 Jun  4 12:00 input.tar.gz
[2025-06-04 12:29:41] -rw-r--r-- 2 boinc boinc 217690332 Jun  4 12:00 ATLAS.root_0
[2025-06-04 12:29:41] -rw------- 1 boinc boinc 179809843 Jun  4 12:29 HITS.pool.root.1
[2025-06-04 12:29:41] -rw------- 1 boinc boinc    573440 Jun  4 12:29 result.tar.gz
12:29:43 (23965): run_atlas exited; CPU time 18247.668257
12:29:43 (23965): called boinc_finish(0)

</stderr_txt>
]]>

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