Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:32:02 (62182): wrapper (7.7.26015): starting
11:32:02 (62182): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:32:02] Arguments: --nthreads 8
[2025-06-04 11:32:02] Threads: 8
[2025-06-04 11:32:02] Checking for CVMFS
[2025-06-04 11:32:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:32:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:32:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:32:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:32:02] 2.12.6.0 5356 6 36756 146786 1 187 18466117 32935936 2564 16776704 0 148383 99.989 70158 104869 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:32:02] CVMFS is ok
[2025-06-04 11:32:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:32:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:32:02] Further information can be found at the LHC@home message board.
[2025-06-04 11:32:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:32:02] Checking for apptainer binary...
[2025-06-04 11:32:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:32:02] Running /usr/bin/apptainer --version
[2025-06-04 11:32:02] apptainer version 1.4.1-1.el9
[2025-06-04 11:32:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:32:02] c7-16-8.aglt2.org
[2025-06-04 11:32:02] apptainer works
[2025-06-04 11:32:02] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:32:02] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:32:02] Starting ATLAS job with PandaID=6679100391
[2025-06-04 11:32:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:06:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:06:05]  filetype=log
[2025-06-04 12:06:05]  guid=b8b351de-82c7-4526-afba-9afb44c0314a
[2025-06-04 12:06:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:06:05]  is_altstaged=None
[2025-06-04 12:06:05]  is_tar=False
[2025-06-04 12:06:05]  lfn=log.45006595._055850.job.log.tgz.1
[2025-06-04 12:06:05]  mtime=0
[2025-06-04 12:06:05]  protocol_id=None
[2025-06-04 12:06:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:06:05]  replicas=None
[2025-06-04 12:06:05]  scope=mc23_13p6TeV
[2025-06-04 12:06:05]  status=None
[2025-06-04 12:06:05]  status_code=0
[2025-06-04 12:06:05]  storage_token=
[2025-06-04 12:06:05]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6679100391/log.45006595._055850.job.log.tgz.1
[2025-06-04 12:06:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/69/log.45006595._055850.job.log.tgz.1
[2025-06-04 12:06:05]  workdir=None
[2025-06-04 12:06:05] ]
[2025-06-04 12:06:05] 2025-06-04 16:05:47,290 | INFO     | transferring file log.45006595._055850.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6679100391/log.45006595._055850.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:06:05] 2025-06-04 16:05:47,290 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6679100391/log.45006595._055850.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._055850.job
[2025-06-04 12:06:05] 2025-06-04 16:05:47,302 | INFO     | adding to output.list: log.45006595._055850.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/69/log.45006595._055850.job.log.tg
[2025-06-04 12:06:05] 2025-06-04 16:05:47,302 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:06:05] 2025-06-04 16:05:47,302 | INFO     | summary of transferred files:
[2025-06-04 12:06:05] 2025-06-04 16:05:47,302 | INFO     |  -- lfn=log.45006595._055850.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:06:05] 2025-06-04 16:05:47,302 | INFO     | stage-out finished correctly
[2025-06-04 12:06:05] 2025-06-04 16:05:47,517 | INFO     | monitor loop #156: job 0:6679100391 is in state 'finished'
[2025-06-04 12:06:05] 2025-06-04 16:05:47,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:06:05] 2025-06-04 16:05:49,614 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:06:05] 2025-06-04 16:05:50,020 | INFO     | monitor loop #157: job 0:6679100391 is in state 'finished'
[2025-06-04 12:06:05] 2025-06-04 16:05:50,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:06:05] 2025-06-04 16:05:51,252 | INFO     | job 6679100391 has state=finished
[2025-06-04 12:06:05] 2025-06-04 16:05:51,253 | INFO     | preparing for final server update for job 6679100391 in state='finished'
[2025-06-04 12:06:05] 2025-06-04 16:05:51,253 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:06:05] 2025-06-04 16:05:51,253 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:06:05] 2025-06-04 16:05:51,253 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:06:05] 2025-06-04 16:05:51,253 | INFO     | job 6679100391 has finished - writing final server update
[2025-06-04 12:06:05] 2025-06-04 16:05:51,253 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:06:05] 2025-06-04 16:05:51,268 | INFO     | executing command: lscpu
[2025-06-04 12:06:05] 2025-06-04 16:05:51,332 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:06:05] 2025-06-04 16:05:52,523 | INFO     | monitor loop #158: job 0:6679100391 is in state 'finished'
[2025-06-04 12:06:05] 2025-06-04 16:05:52,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:06:05] 2025-06-04 16:05:54,169 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 12:06:05] 2025-06-04 16:05:54,169 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679100391/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:06:05] 2025-06-04 16:05:54,170 | INFO     | extracted standard info from prmon json
[2025-06-04 12:06:05] 2025-06-04 16:05:54,170 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:06:05] 2025-06-04 16:05:54,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:06:05] 2025-06-04 16:05:54,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:06:05] 2025-06-04 16:05:54,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:06:05] 2025-06-04 16:05:54,172 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:06:05] 2025-06-04 16:05:54,172 | INFO     | sum of square deviations: 5441962.5
[2025-06-04 12:06:05] 2025-06-04 16:05:54,172 | INFO     | sum of deviations: 196462029.00000003
[2025-06-04 12:06:05] 2025-06-04 16:05:54,172 | INFO     | mean x: 1749052219.5
[2025-06-04 12:06:05] 2025-06-04 16:05:54,172 | INFO     | mean y: 2341929.3076923075
[2025-06-04 12:06:05] 2025-06-04 16:05:54,172 | INFO     | -- intersect: -63140751737.71471
[2025-06-04 12:06:05] 2025-06-04 16:05:54,172 | INFO     | intersect: -63140751737.71471
[2025-06-04 12:06:05] 2025-06-04 16:05:54,172 | INFO     | chi2: 0.0027597781614264925
[2025-06-04 12:06:05] 2025-06-04 16:05:54,172 | INFO     | -- intersect: -63140751737.71471
[2025-06-04 12:06:05] 2025-06-04 16:05:54,172 | INFO     | current memory leak: 36.10 B/s (using 26 data points, chi2=0.00)
[2025-06-04 12:06:05] 2025-06-04 16:05:54,173 | INFO     | ..............................
[2025-06-04 12:06:05] 2025-06-04 16:05:54,173 | INFO     | . Timing measurements:
[2025-06-04 12:06:05] 2025-06-04 16:05:54,173 | INFO     | . get job = 0 s
[2025-06-04 12:06:05] 2025-06-04 16:05:54,173 | INFO     | . initial setup = 2 s
[2025-06-04 12:06:05] 2025-06-04 16:05:54,173 | INFO     | . payload setup = 4 s
[2025-06-04 12:06:05] 2025-06-04 16:05:54,173 | INFO     | . stage-in = 0 s
[2025-06-04 12:06:05] 2025-06-04 16:05:54,173 | INFO     | . payload execution = 1994 s
[2025-06-04 12:06:05] 2025-06-04 16:05:54,173 | INFO     | . stage-out = 0 s
[2025-06-04 12:06:05] 2025-06-04 16:05:54,173 | INFO     | . log creation = 0 s
[2025-06-04 12:06:05] 2025-06-04 16:05:54,173 | INFO     | ..............................
[2025-06-04 12:06:05] 2025-06-04 16:05:54,517 | INFO     | 
[2025-06-04 12:06:05] 2025-06-04 16:05:54,517 | INFO     | job summary report
[2025-06-04 12:06:05] 2025-06-04 16:05:54,517 | INFO     | --------------------------------------------------
[2025-06-04 12:06:05] 2025-06-04 16:05:54,517 | INFO     | PanDA job id: 6679100391
[2025-06-04 12:06:05] 2025-06-04 16:05:54,517 | INFO     | task id: 45006595
[2025-06-04 12:06:05] 2025-06-04 16:05:54,517 | INFO     | errors: (none)
[2025-06-04 12:06:05] 2025-06-04 16:05:54,517 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:06:05] 2025-06-04 16:05:54,517 | INFO     | pilot state: finished 
[2025-06-04 12:06:05] 2025-06-04 16:05:54,517 | INFO     | transexitcode: 0
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | exeerrorcode: 0
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | exeerrordiag: 
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | exitcode: 0
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | exitmsg: OK
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | cpuconsumptiontime: 14669 s
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | nevents: 400
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | neventsw: 0
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | pid: 82208
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | pgrp: 82208
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | corecount: 8
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | event service: False
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | sizes: {0: 2397070, 1: 2397269, 4: 2397475, 11: 2397503, 2002: 2422482, 2003: 2431606, 2006: 2431606, 2010: 2431776}
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | --------------------------------------------------
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | 
[2025-06-04 12:06:05] 2025-06-04 16:05:54,518 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:06:05] 2025-06-04 16:05:54,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:06:05] 2025-06-04 16:05:54,532 | INFO     | job 6679100391 has completed (purged errors)
[2025-06-04 12:06:05] 2025-06-04 16:05:54,532 | INFO     | overall cleanup function is called
[2025-06-04 12:06:05] 2025-06-04 16:05:55,539 | INFO     | --- collectZombieJob: --- 10, [82208]
[2025-06-04 12:06:05] 2025-06-04 16:05:55,539 | INFO     | zombie collector waiting for pid 82208
[2025-06-04 12:06:05] 2025-06-04 16:05:55,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:06:05] 2025-06-04 16:05:55,539 | INFO     | collected zombie processes
[2025-06-04 12:06:05] 2025-06-04 16:05:55,539 | INFO     | will attempt to kill all subprocesses of pid=82208
[2025-06-04 12:06:05] 2025-06-04 16:05:55,737 | INFO     | process IDs to be killed: [82208] (in reverse order)
[2025-06-04 12:06:05] 2025-06-04 16:05:55,807 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:06:05] 2025-06-04 16:05:55,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:06:05] 2025-06-04 16:05:55,813 | INFO     | did not find any defunct processes belonging to 82208
[2025-06-04 12:06:05] 2025-06-04 16:05:55,819 | INFO     | did not find any defunct processes belonging to 82208
[2025-06-04 12:06:05] 2025-06-04 16:05:55,819 | INFO     | ready for new job
[2025-06-04 12:06:05] 2025-06-04 16:05:55,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:06:05] 2025-06-04 16:05:55,820 | INFO     | **************************************
[2025-06-04 12:06:05] 2025-06-04 16:05:55,820 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:06:05] 2025-06-04 16:05:55,820 | INFO     | **************************************
[2025-06-04 12:06:05] 2025-06-04 16:05:55,820 | INFO     | 
[2025-06-04 12:06:05] 2025-06-04 16:05:55,835 | INFO     | architecture information:
[2025-06-04 12:06:05] 2025-06-04 16:05:55,835 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:06:05] 2025-06-04 16:05:55,849 | INFO     | cat /etc/os-release:
[2025-06-04 12:06:05] NAME="CentOS Linux"
[2025-06-04 12:06:05] VERSION="7 (Core)"
[2025-06-04 12:06:05] ID="centos"
[2025-06-04 12:06:05] ID_LIKE="rhel fedora"
[2025-06-04 12:06:05] VERSION_ID="7"
[2025-06-04 12:06:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:06:05] ANSI_COLOR="0;31"
[2025-06-04 12:06:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:06:05] HOME_URL="https://www.centos.org/"
[2025-06-04 12:06:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:06:05] 
[2025-06-04 12:06:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:06:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:06:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:06:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:06:05] 
[2025-06-04 12:06:05] 2025-06-04 16:05:55,850 | INFO     | **************************************
[2025-06-04 12:06:05] 2025-06-04 16:05:56,352 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 12:06:05] 2025-06-04 16:05:56,363 | INFO     | sufficient remaining disk space (75407294464 B)
[2025-06-04 12:06:05] 2025-06-04 16:05:56,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:06:05] 2025-06-04 16:05:56,363 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:06:05] 2025-06-04 16:05:56,363 | INFO     | update_server=False
[2025-06-04 12:06:05] 2025-06-04 16:05:56,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:06:05] 2025-06-04 16:05:56,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:06:05] 2025-06-04 16:05:56,364 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:06:05] 2025-06-04 16:05:56,364 | INFO     | aborting loop
[2025-06-04 12:06:05] 2025-06-04 16:05:56,811 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:06:05] 2025-06-04 16:05:56,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:06:05] 2025-06-04 16:05:56,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:06:05] 2025-06-04 16:05:57,369 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:57,369 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:57,375 | INFO     | all data control threads have been joined
[2025-06-04 12:06:05] 2025-06-04 16:05:57,401 | INFO     | all job control threads have been joined
[2025-06-04 12:06:05] 2025-06-04 16:05:57,441 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:57,508 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:57,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:06:05] 2025-06-04 16:05:57,860 | INFO     | all payload control threads have been joined
[2025-06-04 12:06:05] 2025-06-04 16:05:57,862 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:58,378 | INFO     | [job] validate thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:58,380 | INFO     | [data] control thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:58,400 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:58,406 | INFO     | [job] control thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:58,481 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:58,601 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:58,779 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:58,866 | INFO     | [payload] control thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:05:59,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:06:05] 2025-06-04 16:05:59,855 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:06:00,228 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:06:00,369 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:06:05] 2025-06-04 16:06:00,404 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139841865135936)>', '<ExcThread(monitor, started 139841375299328)>']
[2025-06-04 12:06:05] 2025-06-04 16:06:00,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:06:05] 2025-06-04 16:06:00,832 | INFO     | [monitor] control thread has ended
[2025-06-04 12:06:05] 2025-06-04 16:06:05,430 | INFO     | all workflow threads have been joined
[2025-06-04 12:06:05] 2025-06-04 16:06:05,430 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:06:05] 2025-06-04 16:06:05,430 | INFO     | traces error code: 0
[2025-06-04 12:06:05] 2025-06-04 16:06:05,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:06:05] 2025-06-04 16:06:05,492 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:06:05] 2025-06-04 16:06:05,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:06:05] 2025-06-04 16:06:05,496 [wrapper] pilotpid: 69366
[2025-06-04 12:06:05] 2025-06-04 16:06:05,498 [wrapper] Pilot exit status: 0
[2025-06-04 12:06:05] 2025-06-04 16:06:05,505 [wrapper] pandaids: 6679100391
[2025-06-04 12:06:05] 2025-06-04 16:06:05,552 [wrapper] cleanup supervisor_pilot  132360 69367
[2025-06-04 12:06:05] 2025-06-04 16:06:05,554 [wrapper] Test setup, not cleaning
[2025-06-04 12:06:05] 2025-06-04 16:06:05,555 [wrapper] apfmon messages muted
[2025-06-04 12:06:05] 2025-06-04 16:06:05,557 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:06:05] 2025-06-04 16:06:05,559 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:06:05]  *** Error codes and diagnostics ***
[2025-06-04 12:06:05]     "exeErrorCode": 0,
[2025-06-04 12:06:05]     "exeErrorDiag": "",
[2025-06-04 12:06:05]     "pilotErrorCode": 0,
[2025-06-04 12:06:05]     "pilotErrorDiag": "",
[2025-06-04 12:06:05]  *** Listing of results directory ***
[2025-06-04 12:06:05] total 387680
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:48 queuedata.json
[2025-06-04 12:06:05] -rwx------. 1 boincer umatlas     37140 Jun  4 04:48 runpilot2-wrapper.sh
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:06:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:32 run_atlas
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:32 job.xml
[2025-06-04 12:06:05] -rw-r--r--. 2 boincer umatlas 215199834 Jun  4 11:32 EVNT.45006593._001161.pool.root.1
[2025-06-04 12:06:05] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:32 shared
[2025-06-04 12:06:05] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 11:32 input.tar.gz
[2025-06-04 12:06:05] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:32 start_atlas.sh
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:32 boinc_lockfile
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 11:32 pandaJob.out
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas    990989 Jun  4 11:32 agis_schedconf.cvmfs.json
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas   1598969 Jun  4 11:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:06:05] drwx------. 4 boincer umatlas      4096 Jun  4 11:32 pilot3
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas      6932 Jun  4 12:04 init_data.xml
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas 176894876 Jun  4 12:05 HITS.45006595._055850.pool.root.1
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:05 boinc_task_state.xml
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas        95 Jun  4 12:05 pilot_heartbeat.json
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas      1018 Jun  4 12:05 memory_monitor_summary.json
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas    293317 Jun  4 12:05 log.45006595._055850.job.log.tgz.1
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas      7666 Jun  4 12:05 heartbeat.json
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:05 boinc_mmap_file
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:05 wrapper_checkpoint.txt
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas      4353 Jun  4 12:06 pilotlog.txt
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas    231052 Jun  4 12:06 log.45006595._055850.job.log.1
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas       357 Jun  4 12:06 output.list
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:06 runtime_log
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas    542720 Jun  4 12:06 result.tar.gz
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 12:06 runtime_log.err
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas       647 Jun  4 12:06 FM6MDm3yyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKpnKDmBQO4Pm.diag
[2025-06-04 12:06:05] -rw-r--r--. 1 boincer umatlas     21204 Jun  4 12:06 stderr.txt
[2025-06-04 12:06:05] HITS file was successfully produced:
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas 176894876 Jun  4 12:05 shared/HITS.pool.root.1
[2025-06-04 12:06:05]  *** Contents of shared directory: ***
[2025-06-04 12:06:05] total 383968
[2025-06-04 12:06:05] -rw-r--r--. 2 boincer umatlas 215199834 Jun  4 11:32 ATLAS.root_0
[2025-06-04 12:06:05] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 11:32 input.tar.gz
[2025-06-04 12:06:05] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:32 start_atlas.sh
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas 176894876 Jun  4 12:05 HITS.pool.root.1
[2025-06-04 12:06:05] -rw-------. 1 boincer umatlas    542720 Jun  4 12:06 result.tar.gz
12:06:07 (62182): run_atlas exited; CPU time 14683.766305
12:06:07 (62182): called boinc_finish(0)

</stderr_txt>
]]>

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