Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:19:24 (3487189): wrapper (7.7.26015): starting
15:19:24 (3487189): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 15:19:24] Arguments: --nthreads 2
[2025-06-04 15:19:24] Threads: 2
[2025-06-04 15:19:24] Checking for CVMFS
[2025-06-04 15:19:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:19:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:19:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:19:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:19:24] 2.11.2.0 123033 2570 75208 146781 3 56 3861413 4096000 6461 130560 6 9665493 99.998 629751 1602 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 15:19:24] CVMFS is ok
[2025-06-04 15:19:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:19:24] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 15:19:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 15:19:24] Further information can be found at the LHC@home message board.
[2025-06-04 15:19:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:19:24] Checking for apptainer binary...
[2025-06-04 15:19:24] apptainer is not installed, using version from CVMFS
[2025-06-04 15:19:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:19:24] Enceladus
[2025-06-04 15:19:24] apptainer works
[2025-06-04 15:19:24] Set ATHENA_PROC_NUMBER=2
[2025-06-04 15:19:24] Set ATHENA_CORE_NUMBER=2
[2025-06-04 15:19:24] Starting ATLAS job with PandaID=6679461441
[2025-06-04 15:19:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:51:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:51:22] 2025-06-04 15:51:07,889 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:51:22] 2025-06-04 15:51:07,889 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6679461441/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:51:22] 2025-06-04 15:51:07,890 | INFO     | extracted standard info from prmon json
[2025-06-04 17:51:22] 2025-06-04 15:51:07,890 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:51:22] 2025-06-04 15:51:07,890 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:51:22] 2025-06-04 15:51:07,890 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:51:22] 2025-06-04 15:51:07,890 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:51:22] 2025-06-04 15:51:07,891 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:51:22] 2025-06-04 15:51:07,891 | INFO     | sum of square deviations: 1025693650.0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | sum of deviations: -30344226557.0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | mean x: 1749047708.0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | mean y: 2285221.4161073826
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | -- intersect: 51746292713.86142
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | intersect: 51746292713.86142
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | chi2: 1.8220303744975253
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | sum of square deviations: 925859220.0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | sum of deviations: -20780626823.500008
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | mean x: 1749047555.5
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | mean y: 2299497.715277778
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | -- intersect: 39259136565.66652
[2025-06-04 17:51:22] 2025-06-04 15:51:07,892 | INFO     | intersect: 39259136565.66652
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | chi2: 1.1794382775531524
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | current chi2=1.1794382775531524 (change=35.26791352869653 %)
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | sum of square deviations: 832722590.0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | sum of deviations: -19338024312.000004
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | mean x: 1749047403.0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | mean y: 2301861.338129496
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | -- intersect: 40619815554.64921
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | intersect: 40619815554.64921
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | chi2: 1.176318769416204
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | current chi2=1.176318769416204 (change=0.2644910035835094 %)
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | right removable region: 138
[2025-06-04 17:51:22] 2025-06-04 15:51:07,893 | INFO     | sum of square deviations: 925859220.0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,894 | INFO     | sum of deviations: -40083231089.00002
[2025-06-04 17:51:22] 2025-06-04 15:51:07,894 | INFO     | mean x: 1749047860.5
[2025-06-04 17:51:22] 2025-06-04 15:51:07,894 | INFO     | mean y: 2299548.9166666665
[2025-06-04 17:51:22] 2025-06-04 15:51:07,894 | INFO     | -- intersect: 75723843455.06535
[2025-06-04 17:51:22] 2025-06-04 15:51:07,894 | INFO     | intersect: 75723843455.06535
[2025-06-04 17:51:22] 2025-06-04 15:51:07,894 | INFO     | chi2: 0.7348449587119136
[2025-06-04 17:51:22] 2025-06-04 15:51:07,894 | INFO     | current chi2=0.7348449587119136 (change=59.66889635884542 %)
[2025-06-04 17:51:22] 2025-06-04 15:51:07,894 | INFO     | sum of square deviations: 832722590.0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | sum of deviations: -33236440358.0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | mean x: 1749048013.0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | mean y: 2288329.7194244605
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | -- intersect: 69812007275.08022
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | intersect: 69812007275.08022
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | chi2: 0.7133474047309118
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | current chi2=0.7133474047309118 (change=2.925454373216917 %)
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | left removable region: 20
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | sum of square deviations: 509440249.5
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | sum of deviations: -18089825781.0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | mean x: 1749047982.5
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | mean y: 2297394.8474576273
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | -- intersect: 62109626599.966606
[2025-06-04 17:51:22] 2025-06-04 15:51:07,895 | INFO     | intersect: 62109626599.966606
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | chi2: 0.04468399761912134
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | -- intersect: 62109626599.966606
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | current memory leak: -35.51 B/s (using 118 data points, chi2=0.04)
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | ..............................
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | . Timing measurements:
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | . get job = 0 s
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | . initial setup = 1 s
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | . payload setup = 4 s
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | . stage-in = 0 s
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | . payload execution = 9035 s
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | . stage-out = 0 s
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | . log creation = 0 s
[2025-06-04 17:51:22] 2025-06-04 15:51:07,896 | INFO     | ..............................
[2025-06-04 17:51:22] 2025-06-04 15:51:07,939 | INFO     | 
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | job summary report
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | --------------------------------------------------
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | PanDA job id: 6679461441
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | task id: 45006595
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | errors: (none)
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | pilot state: finished 
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | transexitcode: 0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | exeerrorcode: 0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | exeerrordiag: 
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | exitcode: 0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | exitmsg: OK
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | cpuconsumptiontime: 17871 s
[2025-06-04 17:51:22] 2025-06-04 15:51:07,940 | INFO     | nevents: 400
[2025-06-04 17:51:22] 2025-06-04 15:51:07,941 | INFO     | neventsw: 0
[2025-06-04 17:51:22] 2025-06-04 15:51:07,941 | INFO     | pid: 3497561
[2025-06-04 17:51:22] 2025-06-04 15:51:07,941 | INFO     | pgrp: 3497561
[2025-06-04 17:51:22] 2025-06-04 15:51:07,941 | INFO     | corecount: 2
[2025-06-04 17:51:22] 2025-06-04 15:51:07,941 | INFO     | event service: False
[2025-06-04 17:51:22] 2025-06-04 15:51:07,941 | INFO     | sizes: {0: 2397075, 1: 2397274, 4: 2397480, 11: 2397508, 9044: 2425726, 9045: 2434681, 9048: 2434865, 9082: 2435035}
[2025-06-04 17:51:22] 2025-06-04 15:51:07,941 | INFO     | --------------------------------------------------
[2025-06-04 17:51:22] 2025-06-04 15:51:07,941 | INFO     | 
[2025-06-04 17:51:22] 2025-06-04 15:51:07,941 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-06-04 17:51:22] 2025-06-04 15:51:07,958 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,959 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,959 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,959 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,960 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:51:22] 2025-06-04 15:51:07,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,960 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:51:22] 2025-06-04 15:51:07,960 | INFO     | job 6679461441 has completed (purged errors)
[2025-06-04 17:51:22] 2025-06-04 15:51:07,960 | INFO     | overall cleanup function is called
[2025-06-04 17:51:22] 2025-06-04 15:51:08,968 | INFO     | --- collectZombieJob: --- 10, [3497561]
[2025-06-04 17:51:22] 2025-06-04 15:51:08,968 | INFO     | zombie collector waiting for pid 3497561
[2025-06-04 17:51:22] 2025-06-04 15:51:08,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:51:22] 2025-06-04 15:51:08,968 | INFO     | collected zombie processes
[2025-06-04 17:51:22] 2025-06-04 15:51:08,968 | INFO     | will attempt to kill all subprocesses of pid=3497561
[2025-06-04 17:51:22] 2025-06-04 15:51:09,068 | INFO     | process IDs to be killed: [3497561] (in reverse order)
[2025-06-04 17:51:22] 2025-06-04 15:51:09,121 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:51:22] 2025-06-04 15:51:09,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:51:22] 2025-06-04 15:51:09,126 | INFO     | did not find any defunct processes belonging to 3497561
[2025-06-04 17:51:22] 2025-06-04 15:51:09,129 | INFO     | did not find any defunct processes belonging to 3497561
[2025-06-04 17:51:22] 2025-06-04 15:51:09,129 | INFO     | ready for new job
[2025-06-04 17:51:22] 2025-06-04 15:51:09,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:51:22] 2025-06-04 15:51:09,131 | INFO     | **************************************
[2025-06-04 17:51:22] 2025-06-04 15:51:09,131 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:51:22] 2025-06-04 15:51:09,131 | INFO     | **************************************
[2025-06-04 17:51:22] 2025-06-04 15:51:09,131 | INFO     | 
[2025-06-04 17:51:22] 2025-06-04 15:51:09,150 | INFO     | architecture information:
[2025-06-04 17:51:22] 2025-06-04 15:51:09,150 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:51:22] 2025-06-04 15:51:09,164 | INFO     | cat /etc/os-release:
[2025-06-04 17:51:22] NAME="CentOS Linux"
[2025-06-04 17:51:22] VERSION="7 (Core)"
[2025-06-04 17:51:22] ID="centos"
[2025-06-04 17:51:22] ID_LIKE="rhel fedora"
[2025-06-04 17:51:22] VERSION_ID="7"
[2025-06-04 17:51:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:51:22] ANSI_COLOR="0;31"
[2025-06-04 17:51:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:51:22] HOME_URL="https://www.centos.org/"
[2025-06-04 17:51:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:51:22] 
[2025-06-04 17:51:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:51:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:51:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:51:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:51:22] 
[2025-06-04 17:51:22] 2025-06-04 15:51:09,164 | INFO     | **************************************
[2025-06-04 17:51:22] 2025-06-04 15:51:09,667 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-06-04 17:51:22] 2025-06-04 15:51:09,688 | INFO     | sufficient remaining disk space (292005347328 B)
[2025-06-04 17:51:22] 2025-06-04 15:51:09,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:51:22] 2025-06-04 15:51:09,688 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:51:22] 2025-06-04 15:51:09,688 | INFO     | update_server=False
[2025-06-04 17:51:22] 2025-06-04 15:51:09,688 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:51:22] 2025-06-04 15:51:09,688 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:51:22] 2025-06-04 15:51:09,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:51:22] 2025-06-04 15:51:09,689 | INFO     | aborting loop
[2025-06-04 17:51:22] 2025-06-04 15:51:10,269 | INFO     | all data control threads have been joined
[2025-06-04 17:51:22] 2025-06-04 15:51:10,278 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:51:22] 2025-06-04 15:51:10,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:51:22] 2025-06-04 15:51:10,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:51:22] 2025-06-04 15:51:10,694 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:10,694 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:10,694 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:10,788 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:10,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:51:22] 2025-06-04 15:51:10,863 | INFO     | all payload control threads have been joined
[2025-06-04 17:51:22] 2025-06-04 15:51:10,872 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:11,060 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:51:22] 2025-06-04 15:51:11,240 | INFO     | all job control threads have been joined
[2025-06-04 17:51:22] 2025-06-04 15:51:11,274 | INFO     | [data] control thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:11,627 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:11,642 | INFO     | [job] validate thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:11,715 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:11,867 | INFO     | [payload] control thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:11,906 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:11,912 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:11,918 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:12,245 | INFO     | [job] control thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:12,806 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:15,065 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:51:22] 2025-06-04 15:51:16,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140410703374144)>', '<ExcThread(monitor, started 140409963525888)>']
[2025-06-04 17:51:22] 2025-06-04 15:51:17,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:51:22] 2025-06-04 15:51:17,313 | INFO     | [monitor] control thread has ended
[2025-06-04 17:51:22] 2025-06-04 15:51:21,811 | INFO     | all workflow threads have been joined
[2025-06-04 17:51:22] 2025-06-04 15:51:21,811 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:51:22] 2025-06-04 15:51:21,819 | INFO     | traces error code: 0
[2025-06-04 17:51:22] 2025-06-04 15:51:21,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:51:22] 2025-06-04 15:51:21,895 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:51:22] 2025-06-04 15:51:21,898 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:51:22] 2025-06-04 15:51:21,900 [wrapper] pilotpid: 3490901
[2025-06-04 17:51:22] 2025-06-04 15:51:21,903 [wrapper] Pilot exit status: 0
[2025-06-04 17:51:22] 2025-06-04 15:51:21,911 [wrapper] pandaids: 6679461441
[2025-06-04 17:51:22] 2025-06-04 15:51:21,947 [wrapper] cleanup supervisor_pilot 3617876 3490902
[2025-06-04 17:51:22] 2025-06-04 15:51:21,949 [wrapper] Test setup, not cleaning
[2025-06-04 17:51:22] 2025-06-04 15:51:21,951 [wrapper] apfmon messages muted
[2025-06-04 17:51:22] 2025-06-04 15:51:21,953 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:51:22] 2025-06-04 15:51:21,956 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:51:22]  *** Error codes and diagnostics ***
[2025-06-04 17:51:22]     "exeErrorCode": 0,
[2025-06-04 17:51:22]     "exeErrorDiag": "",
[2025-06-04 17:51:22]     "pilotErrorCode": 0,
[2025-06-04 17:51:22]     "pilotErrorDiag": "",
[2025-06-04 17:51:22]  *** Listing of results directory ***
[2025-06-04 17:51:22] total 393016
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc      5111 Jun  4 11:03 queuedata.json
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc    495897 Jun  4 11:04 pilot3.tar.gz
[2025-06-04 17:51:22] -rwx------ 1 boinc boinc     37140 Jun  4 11:04 runpilot2-wrapper.sh
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc       100 Jun  4 15:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:51:22] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:19 run_atlas
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc       105 Jun  4 15:19 job.xml
[2025-06-04 17:51:22] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:19 start_atlas.sh
[2025-06-04 17:51:22] drwxrwx--x 2 boinc boinc      4096 Jun  4 15:19 shared
[2025-06-04 17:51:22] -rw-r--r-- 2 boinc boinc    508882 Jun  4 15:19 input.tar.gz
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc      8968 Jun  4 15:19 init_data.xml
[2025-06-04 17:51:22] -rw-r--r-- 2 boinc boinc 215498125 Jun  4 15:19 EVNT.45006593._000668.pool.root.1
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc         0 Jun  4 15:19 boinc_setup_complete
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc         0 Jun  4 15:19 boinc_lockfile
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc      2523 Jun  4 15:19 pandaJob.out
[2025-06-04 17:51:22] -rw------- 1 boinc boinc    986819 Jun  4 15:19 agis_schedconf.cvmfs.json
[2025-06-04 17:51:22] -rw------- 1 boinc boinc   1598969 Jun  4 15:19 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:51:22] drwx------ 4 boinc boinc      4096 Jun  4 15:19 pilot3
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc       529 Jun  4 17:50 boinc_task_state.xml
[2025-06-04 17:51:22] -rw------- 1 boinc boinc 180873213 Jun  4 17:50 HITS.45006595._056344.pool.root.1
[2025-06-04 17:51:22] -rw------- 1 boinc boinc      1020 Jun  4 17:50 memory_monitor_summary.json
[2025-06-04 17:51:22] -rw------- 1 boinc boinc    252386 Jun  4 17:50 log.45006595._056344.job.log.tgz.1
[2025-06-04 17:51:22] -rw------- 1 boinc boinc        95 Jun  4 17:50 pilot_heartbeat.json
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:50 boinc_mmap_file
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc        27 Jun  4 17:50 wrapper_checkpoint.txt
[2025-06-04 17:51:22] -rw------- 1 boinc boinc      7657 Jun  4 17:51 heartbeat.json
[2025-06-04 17:51:22] -rw------- 1 boinc boinc      4361 Jun  4 17:51 pilotlog.txt
[2025-06-04 17:51:22] -rw------- 1 boinc boinc    869454 Jun  4 17:51 log.45006595._056344.job.log.1
[2025-06-04 17:51:22] -rw------- 1 boinc boinc       357 Jun  4 17:51 output.list
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:51 runtime_log
[2025-06-04 17:51:22] -rw------- 1 boinc boinc   1136640 Jun  4 17:51 result.tar.gz
[2025-06-04 17:51:22] -rw------- 1 boinc boinc       641 Jun  4 17:51 tPAMDmTEzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRvnKDmWqLjUm.diag
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc      8715 Jun  4 17:51 runtime_log.err
[2025-06-04 17:51:22] -rw-r--r-- 1 boinc boinc     20901 Jun  4 17:51 stderr.txt
[2025-06-04 17:51:22] HITS file was successfully produced:
[2025-06-04 17:51:22] -rw------- 1 boinc boinc 180873213 Jun  4 17:50 shared/HITS.pool.root.1
[2025-06-04 17:51:22]  *** Contents of shared directory: ***
[2025-06-04 17:51:22] total 388720
[2025-06-04 17:51:22] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:19 start_atlas.sh
[2025-06-04 17:51:22] -rw-r--r-- 2 boinc boinc    508882 Jun  4 15:19 input.tar.gz
[2025-06-04 17:51:22] -rw-r--r-- 2 boinc boinc 215498125 Jun  4 15:19 ATLAS.root_0
[2025-06-04 17:51:22] -rw------- 1 boinc boinc 180873213 Jun  4 17:50 HITS.pool.root.1
[2025-06-04 17:51:22] -rw------- 1 boinc boinc   1136640 Jun  4 17:51 result.tar.gz
17:51:23 (3487189): run_atlas exited; CPU time 17958.838423
17:51:23 (3487189): called boinc_finish(0)

</stderr_txt>
]]>

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