Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:56:53 (3986084): wrapper (7.7.26015): starting
02:56:53 (3986084): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 02:56:53] Arguments: --nthreads 12
[2025-06-05 02:56:53] Threads: 12
[2025-06-05 02:56:53] Checking for CVMFS
[2025-06-05 02:56:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:56:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:56:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:56:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:56:53] 2.12.7.0 8631 8237 95408 146799 0 187 43177368 46080001 922 130560 0 12021533 99.997 967144 16400 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-05 02:56:53] CVMFS is ok
[2025-06-05 02:56:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 02:56:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 02:56:53] Further information can be found at the LHC@home message board.
[2025-06-05 02:56:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:56:53] Checking for apptainer binary...
[2025-06-05 02:56:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:56:53] Running /usr/bin/apptainer --version
[2025-06-05 02:56:53] apptainer version 1.4.1-1.el9
[2025-06-05 02:56:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:56:53] gpu01.farm.particle.cz
[2025-06-05 02:56:53] apptainer works
[2025-06-05 02:56:53] Set ATHENA_PROC_NUMBER=12
[2025-06-05 02:56:53] Set ATHENA_CORE_NUMBER=12
[2025-06-05 02:56:53] Starting ATLAS job with PandaID=6679150354
[2025-06-05 02:56:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:34:11]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:34:11]  filetype=log
[2025-06-05 03:34:11]  guid=9373d82f-eb4e-4994-a841-5d703d3618cc
[2025-06-05 03:34:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 03:34:11]  is_altstaged=None
[2025-06-05 03:34:11]  is_tar=False
[2025-06-05 03:34:11]  lfn=log.45006595._055909.job.log.tgz.1
[2025-06-05 03:34:11]  mtime=0
[2025-06-05 03:34:11]  protocol_id=None
[2025-06-05 03:34:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 03:34:11]  replicas=None
[2025-06-05 03:34:11]  scope=mc23_13p6TeV
[2025-06-05 03:34:11]  status=None
[2025-06-05 03:34:11]  status_code=0
[2025-06-05 03:34:11]  storage_token=
[2025-06-05 03:34:11]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6679150354/log.45006595._055909.job.log.tgz.1
[2025-06-05 03:34:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/87/log.45006595._055909.job.log.tgz.1
[2025-06-05 03:34:11]  workdir=None
[2025-06-05 03:34:11] ]
[2025-06-05 03:34:11] 2025-06-05 01:33:46,760 | INFO     | transferring file log.45006595._055909.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6679150354/log.45006595._055909.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-05 03:34:11] 2025-06-05 01:33:46,760 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6679150354/log.45006595._055909.job.log.tgz.1 /var/lib/boinc/slots/1/log.45006595._055909.job
[2025-06-05 03:34:11] 2025-06-05 01:33:46,774 | INFO     | adding to output.list: log.45006595._055909.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/87/log.45006595._055909.job.log.tg
[2025-06-05 03:34:11] 2025-06-05 01:33:46,774 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 03:34:11] 2025-06-05 01:33:46,774 | INFO     | summary of transferred files:
[2025-06-05 03:34:11] 2025-06-05 01:33:46,774 | INFO     |  -- lfn=log.45006595._055909.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 03:34:11] 2025-06-05 01:33:46,774 | INFO     | stage-out finished correctly
[2025-06-05 03:34:11] 2025-06-05 01:33:48,924 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 03:34:11] 2025-06-05 01:33:49,635 | INFO     | job 6679150354 has state=finished
[2025-06-05 03:34:11] 2025-06-05 01:33:49,636 | INFO     | preparing for final server update for job 6679150354 in state='finished'
[2025-06-05 03:34:11] 2025-06-05 01:33:49,636 | INFO     | this job has now completed (state=finished)
[2025-06-05 03:34:11] 2025-06-05 01:33:49,636 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 03:34:11] 2025-06-05 01:33:49,636 | INFO     | log transfer has been attempted: DONE
[2025-06-05 03:34:11] 2025-06-05 01:33:49,636 | INFO     | job 6679150354 has finished - writing final server update
[2025-06-05 03:34:11] 2025-06-05 01:33:49,636 | INFO     | total number of processed events: 400 (read)
[2025-06-05 03:34:11] 2025-06-05 01:33:49,638 | INFO     | executing command: lscpu
[2025-06-05 03:34:11] 2025-06-05 01:33:49,664 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 03:34:11] 2025-06-05 01:33:50,559 | WARNING  | process 3996597 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 03:34:11] 2025-06-05 01:33:50,559 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6679150354/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:34:11] 2025-06-05 01:33:50,641 | INFO     | number of running child processes to parent process 3996597: 1
[2025-06-05 03:34:11] 2025-06-05 01:33:50,642 | INFO     | maximum number of monitored processes: 6
[2025-06-05 03:34:11] 2025-06-05 01:33:52,243 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 03:34:11] 2025-06-05 01:33:52,243 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6679150354/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:34:11] 2025-06-05 01:33:52,244 | INFO     | extracted standard info from prmon json
[2025-06-05 03:34:11] 2025-06-05 01:33:52,244 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:34:11] 2025-06-05 01:33:52,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:34:11] 2025-06-05 01:33:52,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:34:11] 2025-06-05 01:33:52,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:34:11] 2025-06-05 01:33:52,245 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:34:11] 2025-06-05 01:33:52,245 | INFO     | sum of square deviations: 7553630.0
[2025-06-05 03:34:11] 2025-06-05 01:33:52,245 | INFO     | sum of deviations: -1199193022.0
[2025-06-05 03:34:11] 2025-06-05 01:33:52,245 | INFO     | mean x: 1749086200.0
[2025-06-05 03:34:11] 2025-06-05 01:33:52,245 | INFO     | mean y: 2789434.103448276
[2025-06-05 03:34:11] 2025-06-05 01:33:52,245 | INFO     | -- intersect: 277682787781.45386
[2025-06-05 03:34:11] 2025-06-05 01:33:52,245 | INFO     | intersect: 277682787781.45386
[2025-06-05 03:34:11] 2025-06-05 01:33:52,245 | INFO     | chi2: 0.011668477818306336
[2025-06-05 03:34:11] 2025-06-05 01:33:52,245 | INFO     | -- intersect: 277682787781.45386
[2025-06-05 03:34:11] 2025-06-05 01:33:52,245 | INFO     | current memory leak: -158.76 B/s (using 29 data points, chi2=0.01)
[2025-06-05 03:34:11] 2025-06-05 01:33:52,245 | INFO     | ..............................
[2025-06-05 03:34:11] 2025-06-05 01:33:52,246 | INFO     | . Timing measurements:
[2025-06-05 03:34:11] 2025-06-05 01:33:52,246 | INFO     | . get job = 0 s
[2025-06-05 03:34:11] 2025-06-05 01:33:52,246 | INFO     | . initial setup = 1 s
[2025-06-05 03:34:11] 2025-06-05 01:33:52,246 | INFO     | . payload setup = 4 s
[2025-06-05 03:34:11] 2025-06-05 01:33:52,246 | INFO     | . stage-in = 0 s
[2025-06-05 03:34:11] 2025-06-05 01:33:52,246 | INFO     | . payload execution = 2183 s
[2025-06-05 03:34:11] 2025-06-05 01:33:52,246 | INFO     | . stage-out = 0 s
[2025-06-05 03:34:11] 2025-06-05 01:33:52,246 | INFO     | . log creation = 0 s
[2025-06-05 03:34:11] 2025-06-05 01:33:52,246 | INFO     | ..............................
[2025-06-05 03:34:11] 2025-06-05 01:33:52,378 | INFO     | 
[2025-06-05 03:34:11] 2025-06-05 01:33:52,378 | INFO     | job summary report
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | --------------------------------------------------
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | PanDA job id: 6679150354
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | task id: 45006595
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | errors: (none)
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | pilot state: finished 
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | transexitcode: 0
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | exeerrorcode: 0
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | exeerrordiag: 
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | exitcode: 0
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | exitmsg: OK
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | cpuconsumptiontime: 23065 s
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | nevents: 400
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | neventsw: 0
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | pid: 3996597
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | pgrp: 3996597
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | corecount: 12
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | event service: False
[2025-06-05 03:34:11] 2025-06-05 01:33:52,379 | INFO     | sizes: {0: 2396464, 1: 2397320, 4: 2397526, 11: 2397554, 2191: 2422627, 2193: 2431568, 2195: 2431752, 2198: 2431922}
[2025-06-05 03:34:11] 2025-06-05 01:33:52,380 | INFO     | --------------------------------------------------
[2025-06-05 03:34:11] 2025-06-05 01:33:52,380 | INFO     | 
[2025-06-05 03:34:11] 2025-06-05 01:33:52,380 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-05 03:34:11] 2025-06-05 01:33:52,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,394 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,394 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:34:11] 2025-06-05 01:33:52,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,394 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:34:11] 2025-06-05 01:33:52,394 | INFO     | job 6679150354 has completed (purged errors)
[2025-06-05 03:34:11] 2025-06-05 01:33:52,394 | INFO     | overall cleanup function is called
[2025-06-05 03:34:11] 2025-06-05 01:33:53,403 | INFO     | --- collectZombieJob: --- 10, [3996597]
[2025-06-05 03:34:11] 2025-06-05 01:33:53,403 | INFO     | zombie collector waiting for pid 3996597
[2025-06-05 03:34:11] 2025-06-05 01:33:53,403 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:34:11] 2025-06-05 01:33:53,403 | INFO     | collected zombie processes
[2025-06-05 03:34:11] 2025-06-05 01:33:53,403 | INFO     | will attempt to kill all subprocesses of pid=3996597
[2025-06-05 03:34:11] 2025-06-05 01:33:53,491 | INFO     | process IDs to be killed: [3996597] (in reverse order)
[2025-06-05 03:34:11] 2025-06-05 01:33:53,528 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:34:11] 2025-06-05 01:33:53,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:34:11] 2025-06-05 01:33:53,531 | INFO     | did not find any defunct processes belonging to 3996597
[2025-06-05 03:34:11] 2025-06-05 01:33:53,534 | INFO     | did not find any defunct processes belonging to 3996597
[2025-06-05 03:34:11] 2025-06-05 01:33:53,534 | INFO     | ready for new job
[2025-06-05 03:34:11] 2025-06-05 01:33:53,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:34:11] 2025-06-05 01:33:53,535 | INFO     | **************************************
[2025-06-05 03:34:11] 2025-06-05 01:33:53,535 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:34:11] 2025-06-05 01:33:53,535 | INFO     | **************************************
[2025-06-05 03:34:11] 2025-06-05 01:33:53,535 | INFO     | 
[2025-06-05 03:34:11] 2025-06-05 01:33:53,536 | INFO     | architecture information:
[2025-06-05 03:34:11] 2025-06-05 01:33:53,536 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:34:11] 2025-06-05 01:33:53,547 | INFO     | cat /etc/os-release:
[2025-06-05 03:34:11] NAME="CentOS Linux"
[2025-06-05 03:34:11] VERSION="7 (Core)"
[2025-06-05 03:34:11] ID="centos"
[2025-06-05 03:34:11] ID_LIKE="rhel fedora"
[2025-06-05 03:34:11] VERSION_ID="7"
[2025-06-05 03:34:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:34:11] ANSI_COLOR="0;31"
[2025-06-05 03:34:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:34:11] HOME_URL="https://www.centos.org/"
[2025-06-05 03:34:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:34:11] 
[2025-06-05 03:34:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:34:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:34:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:34:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:34:11] 
[2025-06-05 03:34:11] 2025-06-05 01:33:53,547 | INFO     | **************************************
[2025-06-05 03:34:11] 2025-06-05 01:33:54,050 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-05 03:34:11] 2025-06-05 01:33:54,062 | INFO     | sufficient remaining disk space (69569871872 B)
[2025-06-05 03:34:11] 2025-06-05 01:33:54,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:34:11] 2025-06-05 01:33:54,062 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:34:11] 2025-06-05 01:33:54,062 | INFO     | update_server=False
[2025-06-05 03:34:11] 2025-06-05 01:33:54,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:34:11] 2025-06-05 01:33:54,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:34:11] 2025-06-05 01:33:54,063 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:34:11] 2025-06-05 01:33:54,063 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:34:11] 2025-06-05 01:33:54,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:34:11] 2025-06-05 01:33:54,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:34:11] 2025-06-05 01:33:54,150 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:34:11] 2025-06-05 01:33:54,150 | INFO     | aborting loop
[2025-06-05 03:34:11] 2025-06-05 01:33:54,404 | INFO     | all data control threads have been joined
[2025-06-05 03:34:11] 2025-06-05 01:33:54,838 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:34:11] 2025-06-05 01:33:54,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:34:11] 2025-06-05 01:33:55,067 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:55,068 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:55,084 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:55,155 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:55,182 | INFO     | all payload control threads have been joined
[2025-06-05 03:34:11] 2025-06-05 01:33:55,281 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:55,410 | INFO     | [data] control thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:55,556 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:55,684 | INFO     | all job control threads have been joined
[2025-06-05 03:34:11] 2025-06-05 01:33:56,187 | INFO     | [payload] control thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:56,401 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:56,434 | INFO     | [job] validate thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:56,453 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:56,588 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:56,690 | INFO     | [job] control thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:56,844 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:33:58,990 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:34:04,820 | INFO     | job.realtimelogging is not enabled
[2025-06-05 03:34:11] 2025-06-05 01:34:05,825 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:34:11] 2025-06-05 01:34:06,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954523891520)>', '<ExcThread(monitor, started 139954034296576)>']
[2025-06-05 03:34:11] 2025-06-05 01:34:07,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:34:11] 2025-06-05 01:34:07,128 | INFO     | [monitor] control thread has ended
[2025-06-05 03:34:11] 2025-06-05 01:34:11,807 | INFO     | all workflow threads have been joined
[2025-06-05 03:34:11] 2025-06-05 01:34:11,808 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:34:11] 2025-06-05 01:34:11,808 | INFO     | traces error code: 0
[2025-06-05 03:34:11] 2025-06-05 01:34:11,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:34:11] 2025-06-05 01:34:11,875 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:34:11] 2025-06-05 01:34:11,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:34:11] 2025-06-05 01:34:11,879 [wrapper] pilotpid: 3989856
[2025-06-05 03:34:11] 2025-06-05 01:34:11,881 [wrapper] Pilot exit status: 0
[2025-06-05 03:34:11] 2025-06-05 01:34:11,888 [wrapper] pandaids: 6679150354
[2025-06-05 03:34:11] 2025-06-05 01:34:11,913 [wrapper] cleanup supervisor_pilot 4039619 3989857
[2025-06-05 03:34:11] 2025-06-05 01:34:11,915 [wrapper] Test setup, not cleaning
[2025-06-05 03:34:11] 2025-06-05 01:34:11,917 [wrapper] apfmon messages muted
[2025-06-05 03:34:11] 2025-06-05 01:34:11,919 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:34:11] 2025-06-05 01:34:11,920 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:34:11]  *** Error codes and diagnostics ***
[2025-06-05 03:34:11]     "exeErrorCode": 0,
[2025-06-05 03:34:11]     "exeErrorDiag": "",
[2025-06-05 03:34:11]     "pilotErrorCode": 0,
[2025-06-05 03:34:11]     "pilotErrorDiag": "",
[2025-06-05 03:34:11]  *** Listing of results directory ***
[2025-06-05 03:34:11] total 386764
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 03:34:11] -rwx------ 1 boinc boinc     37140 Jun  4 10:51 runpilot2-wrapper.sh
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:51 queuedata.json
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc       100 Jun  5 02:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:34:11] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 02:56 run_atlas
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc       105 Jun  5 02:56 job.xml
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc      9445 Jun  5 02:56 init_data.xml
[2025-06-05 03:34:11] -rw-r--r-- 2 boinc boinc 213969299 Jun  5 02:56 EVNT.45006593._001363.pool.root.1
[2025-06-05 03:34:11] -rw-r--r-- 2 boinc boinc     15093 Jun  5 02:56 start_atlas.sh
[2025-06-05 03:34:11] drwxrwx--x 2 boinc boinc      4096 Jun  5 02:56 shared
[2025-06-05 03:34:11] -rw-r--r-- 2 boinc boinc    508876 Jun  5 02:56 input.tar.gz
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc         0 Jun  5 02:56 boinc_lockfile
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc      2525 Jun  5 02:56 pandaJob.out
[2025-06-05 03:34:11] -rw------- 1 boinc boinc    987117 Jun  5 02:56 agis_schedconf.cvmfs.json
[2025-06-05 03:34:11] -rw------- 1 boinc boinc   1598969 Jun  5 02:56 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:34:11] drwx------ 4 boinc boinc      4096 Jun  5 02:57 pilot3
[2025-06-05 03:34:11] -rw------- 1 boinc boinc        95 Jun  5 03:33 pilot_heartbeat.json
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc       529 Jun  5 03:33 boinc_task_state.xml
[2025-06-05 03:34:11] -rw------- 1 boinc boinc 177052290 Jun  5 03:33 HITS.45006595._055909.pool.root.1
[2025-06-05 03:34:11] -rw------- 1 boinc boinc      1013 Jun  5 03:33 memory_monitor_summary.json
[2025-06-05 03:34:11] -rw------- 1 boinc boinc    346315 Jun  5 03:33 log.45006595._055909.job.log.tgz.1
[2025-06-05 03:34:11] -rw------- 1 boinc boinc      7682 Jun  5 03:33 heartbeat.json
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc        27 Jun  5 03:34 wrapper_checkpoint.txt
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc      8192 Jun  5 03:34 boinc_mmap_file
[2025-06-05 03:34:11] -rw------- 1 boinc boinc      4548 Jun  5 03:34 pilotlog.txt
[2025-06-05 03:34:11] -rw------- 1 boinc boinc    248486 Jun  5 03:34 log.45006595._055909.job.log.1
[2025-06-05 03:34:11] -rw------- 1 boinc boinc       357 Jun  5 03:34 output.list
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc       620 Jun  5 03:34 runtime_log
[2025-06-05 03:34:11] -rw------- 1 boinc boinc    614400 Jun  5 03:34 result.tar.gz
[2025-06-05 03:34:11] -rw------- 1 boinc boinc       658 Jun  5 03:34 wXhLDmT1yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5pnKDm0taeTm.diag
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc      8696 Jun  5 03:34 runtime_log.err
[2025-06-05 03:34:11] -rw-r--r-- 1 boinc boinc     21230 Jun  5 03:34 stderr.txt
[2025-06-05 03:34:11] HITS file was successfully produced:
[2025-06-05 03:34:11] -rw------- 1 boinc boinc 177052290 Jun  5 03:33 shared/HITS.pool.root.1
[2025-06-05 03:34:11]  *** Contents of shared directory: ***
[2025-06-05 03:34:11] total 382984
[2025-06-05 03:34:11] -rw-r--r-- 2 boinc boinc 213969299 Jun  5 02:56 ATLAS.root_0
[2025-06-05 03:34:11] -rw-r--r-- 2 boinc boinc     15093 Jun  5 02:56 start_atlas.sh
[2025-06-05 03:34:11] -rw-r--r-- 2 boinc boinc    508876 Jun  5 02:56 input.tar.gz
[2025-06-05 03:34:11] -rw------- 1 boinc boinc 177052290 Jun  5 03:33 HITS.pool.root.1
[2025-06-05 03:34:11] -rw------- 1 boinc boinc    614400 Jun  5 03:34 result.tar.gz
03:34:13 (3986084): run_atlas exited; CPU time 23076.404173
03:34:13 (3986084): called boinc_finish(0)

</stderr_txt>
]]>

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