Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:52:09 (2657000): wrapper (7.7.26015): starting
01:52:09 (2657000): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 01:52:09] Arguments: --nthreads 4
[2025-06-06 01:52:09] Threads: 4
[2025-06-06 01:52:09] Checking for CVMFS
[2025-06-06 01:52:09] No cvmfs_config command found, will try listing directly
[2025-06-06 01:52:09] CVMFS is ok
[2025-06-06 01:52:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 01:52:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 01:52:09] Further information can be found at the LHC@home message board.
[2025-06-06 01:52:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 01:52:09] Checking for apptainer binary...
[2025-06-06 01:52:09] which: no apptainer in ((null))
[2025-06-06 01:52:09] apptainer is not installed, using version from CVMFS
[2025-06-06 01:52:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 01:52:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-06 01:52:09] apptainer works
[2025-06-06 01:52:09] Set ATHENA_PROC_NUMBER=4
[2025-06-06 01:52:09] Set ATHENA_CORE_NUMBER=4
[2025-06-06 01:52:09] Starting ATLAS job with PandaID=6679478473
[2025-06-06 01:52:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 04:09:44]  *** The last 200 lines of the pilot log: ***
[2025-06-06 04:09:44] 2025-06-06 02:09:07,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 04:09:44] 2025-06-06 02:09:08,807 | INFO     | PID=2662725 has CPU usage=17.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 04:09:44] 2025-06-06 02:09:08,808 | INFO     | .. there are 6 such processes running
[2025-06-06 04:09:44] 2025-06-06 02:09:10,027 | INFO     | monitor loop #573: job 0:6679478473 is in state 'finished'
[2025-06-06 04:09:44] 2025-06-06 02:09:10,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 04:09:44] 2025-06-06 02:09:11,807 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 04:09:44] 2025-06-06 02:09:11,807 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-6679478473/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 04:09:44] 2025-06-06 02:09:11,808 | INFO     | extracted standard info from prmon json
[2025-06-06 04:09:44] 2025-06-06 02:09:11,808 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 04:09:44] 2025-06-06 02:09:11,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 04:09:44] 2025-06-06 02:09:11,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 04:09:44] 2025-06-06 02:09:11,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 04:09:44] 2025-06-06 02:09:11,810 | INFO     | fitting pss+swap vs Time
[2025-06-06 04:09:44] 2025-06-06 02:09:11,810 | INFO     | sum of square deviations: 746051197.5
[2025-06-06 04:09:44] 2025-06-06 02:09:11,811 | INFO     | sum of deviations: 19665611331.000004
[2025-06-06 04:09:44] 2025-06-06 02:09:11,811 | INFO     | mean x: 1749171633.5
[2025-06-06 04:09:44] 2025-06-06 02:09:11,811 | INFO     | mean y: 2299512.3731343285
[2025-06-06 04:09:44] 2025-06-06 02:09:11,811 | INFO     | -- intersect: -46105165512.668106
[2025-06-06 04:09:44] 2025-06-06 02:09:11,811 | INFO     | intersect: -46105165512.668106
[2025-06-06 04:09:44] 2025-06-06 02:09:11,812 | INFO     | chi2: 1.584499392766542
[2025-06-06 04:09:44] 2025-06-06 02:09:11,812 | INFO     | sum of square deviations: 665612480.0
[2025-06-06 04:09:44] 2025-06-06 02:09:11,812 | INFO     | sum of deviations: 18781260048.999996
[2025-06-06 04:09:44] 2025-06-06 02:09:11,812 | INFO     | mean x: 1749171481.0
[2025-06-06 04:09:44] 2025-06-06 02:09:11,812 | INFO     | mean y: 2297834.992248062
[2025-06-06 04:09:44] 2025-06-06 02:09:11,812 | INFO     | -- intersect: -49353213730.76964
[2025-06-06 04:09:44] 2025-06-06 02:09:11,813 | INFO     | intersect: -49353213730.76964
[2025-06-06 04:09:44] 2025-06-06 02:09:11,813 | INFO     | chi2: 1.5867159376040811
[2025-06-06 04:09:44] 2025-06-06 02:09:11,813 | INFO     | current chi2=1.5867159376040811 (change=-0.13988928286485391 %)
[2025-06-06 04:09:44] 2025-06-06 02:09:11,813 | INFO     | right removable region: 128
[2025-06-06 04:09:44] 2025-06-06 02:09:11,813 | INFO     | sum of square deviations: 665612480.0
[2025-06-06 04:09:44] 2025-06-06 02:09:11,814 | INFO     | sum of deviations: -658608033.0000004
[2025-06-06 04:09:44] 2025-06-06 02:09:11,814 | INFO     | mean x: 1749171786.0
[2025-06-06 04:09:44] 2025-06-06 02:09:11,814 | INFO     | mean y: 2337427.108527132
[2025-06-06 04:09:44] 2025-06-06 02:09:11,814 | INFO     | -- intersect: 1733102134.760279
[2025-06-06 04:09:44] 2025-06-06 02:09:11,814 | INFO     | intersect: 1733102134.760279
[2025-06-06 04:09:44] 2025-06-06 02:09:11,814 | INFO     | chi2: 0.00655575552010519
[2025-06-06 04:09:44] 2025-06-06 02:09:11,814 | INFO     | current chi2=0.00655575552010519 (change=99.58625698753605 %)
[2025-06-06 04:09:44] 2025-06-06 02:09:11,814 | INFO     | sum of square deviations: 591173875.0
[2025-06-06 04:09:44] 2025-06-06 02:09:11,815 | INFO     | sum of deviations: -264865324.49999985
[2025-06-06 04:09:44] 2025-06-06 02:09:11,815 | INFO     | mean x: 1749171938.5
[2025-06-06 04:09:44] 2025-06-06 02:09:11,815 | INFO     | mean y: 2336612.540322581
[2025-06-06 04:09:44] 2025-06-06 02:09:11,815 | INFO     | -- intersect: 786023126.2535619
[2025-06-06 04:09:44] 2025-06-06 02:09:11,815 | INFO     | intersect: 786023126.2535619
[2025-06-06 04:09:44] 2025-06-06 02:09:11,815 | INFO     | chi2: 0.006200362085638553
[2025-06-06 04:09:44] 2025-06-06 02:09:11,816 | INFO     | current chi2=0.006200362085638553 (change=5.421090420115828 %)
[2025-06-06 04:09:44] 2025-06-06 02:09:11,816 | INFO     | left removable region: 20
[2025-06-06 04:09:44] 2025-06-06 02:09:11,816 | INFO     | sum of square deviations: 390582207.0
[2025-06-06 04:09:44] 2025-06-06 02:09:11,816 | INFO     | sum of deviations: 1017451330.0
[2025-06-06 04:09:44] 2025-06-06 02:09:11,816 | INFO     | mean x: 1749172060.5
[2025-06-06 04:09:44] 2025-06-06 02:09:11,816 | INFO     | mean y: 2332616.314814815
[2025-06-06 04:09:44] 2025-06-06 02:09:11,816 | INFO     | -- intersect: -4554191996.068682
[2025-06-06 04:09:44] 2025-06-06 02:09:11,816 | INFO     | intersect: -4554191996.068682
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | chi2: 0.00250268580179791
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | -- intersect: -4554191996.068682
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | current memory leak: 2.60 B/s (using 108 data points, chi2=0.00)
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | ..............................
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | . Timing measurements:
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | . get job = 0 s
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | . initial setup = 1 s
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | . payload setup = 9 s
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | . stage-in = 0 s
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | . payload execution = 8168 s
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | . stage-out = 0 s
[2025-06-06 04:09:44] 2025-06-06 02:09:11,817 | INFO     | . log creation = 0 s
[2025-06-06 04:09:44] 2025-06-06 02:09:11,818 | INFO     | ..............................
[2025-06-06 04:09:44] 2025-06-06 02:09:12,336 | INFO     | 
[2025-06-06 04:09:44] 2025-06-06 02:09:12,336 | INFO     | job summary report
[2025-06-06 04:09:44] 2025-06-06 02:09:12,336 | INFO     | --------------------------------------------------
[2025-06-06 04:09:44] 2025-06-06 02:09:12,336 | INFO     | PanDA job id: 6679478473
[2025-06-06 04:09:44] 2025-06-06 02:09:12,336 | INFO     | task id: 45006595
[2025-06-06 04:09:44] 2025-06-06 02:09:12,336 | INFO     | errors: (none)
[2025-06-06 04:09:44] 2025-06-06 02:09:12,336 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 04:09:44] 2025-06-06 02:09:12,336 | INFO     | pilot state: finished 
[2025-06-06 04:09:44] 2025-06-06 02:09:12,336 | INFO     | transexitcode: 0
[2025-06-06 04:09:44] 2025-06-06 02:09:12,336 | INFO     | exeerrorcode: 0
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | exeerrordiag: 
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | exitcode: 0
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | exitmsg: OK
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | cpuconsumptiontime: 31080 s
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | nevents: 400
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | neventsw: 0
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | pid: 2670872
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | pgrp: 2670872
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | corecount: 4
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | event service: False
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | sizes: {0: 2397132, 1: 2397331, 7: 2397537, 11: 2397565, 8181: 2425336, 8182: 2425335, 8183: 2434538, 8191: 2434652}
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | --------------------------------------------------
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | 
[2025-06-06 04:09:44] 2025-06-06 02:09:12,337 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2025-06-06 04:09:44] 2025-06-06 02:09:12,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,362 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,362 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,362 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,362 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | job 6679478473 has completed (purged errors)
[2025-06-06 04:09:44] 2025-06-06 02:09:12,363 | INFO     | overall cleanup function is called
[2025-06-06 04:09:44] 2025-06-06 02:09:13,372 | INFO     | --- collectZombieJob: --- 10, [2670872]
[2025-06-06 04:09:44] 2025-06-06 02:09:13,372 | INFO     | zombie collector waiting for pid 2670872
[2025-06-06 04:09:44] 2025-06-06 02:09:13,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 04:09:44] 2025-06-06 02:09:13,372 | INFO     | collected zombie processes
[2025-06-06 04:09:44] 2025-06-06 02:09:13,372 | INFO     | will attempt to kill all subprocesses of pid=2670872
[2025-06-06 04:09:44] 2025-06-06 02:09:13,940 | INFO     | process IDs to be killed: [2670872] (in reverse order)
[2025-06-06 04:09:44] 2025-06-06 02:09:14,113 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 04:09:44] 2025-06-06 02:09:14,113 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 04:09:44] 2025-06-06 02:09:14,136 | INFO     | did not find any defunct processes belonging to 2670872
[2025-06-06 04:09:44] 2025-06-06 02:09:14,156 | INFO     | did not find any defunct processes belonging to 2670872
[2025-06-06 04:09:44] 2025-06-06 02:09:14,156 | INFO     | ready for new job
[2025-06-06 04:09:44] 2025-06-06 02:09:14,156 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 04:09:44] 2025-06-06 02:09:14,158 | INFO     | **************************************
[2025-06-06 04:09:44] 2025-06-06 02:09:14,158 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 04:09:44] 2025-06-06 02:09:14,158 | INFO     | **************************************
[2025-06-06 04:09:44] 2025-06-06 02:09:14,158 | INFO     | 
[2025-06-06 04:09:44] 2025-06-06 02:09:14,166 | INFO     | architecture information:
[2025-06-06 04:09:44] 2025-06-06 02:09:14,166 | INFO     | executing command: cat /etc/os-release
[2025-06-06 04:09:44] 2025-06-06 02:09:14,189 | INFO     | cat /etc/os-release:
[2025-06-06 04:09:44] NAME="CentOS Linux"
[2025-06-06 04:09:44] VERSION="7 (Core)"
[2025-06-06 04:09:44] ID="centos"
[2025-06-06 04:09:44] ID_LIKE="rhel fedora"
[2025-06-06 04:09:44] VERSION_ID="7"
[2025-06-06 04:09:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 04:09:44] ANSI_COLOR="0;31"
[2025-06-06 04:09:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 04:09:44] HOME_URL="https://www.centos.org/"
[2025-06-06 04:09:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 04:09:44] 
[2025-06-06 04:09:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 04:09:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 04:09:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 04:09:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 04:09:44] 
[2025-06-06 04:09:44] 2025-06-06 02:09:14,190 | INFO     | **************************************
[2025-06-06 04:09:44] 2025-06-06 02:09:14,693 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2025-06-06 04:09:44] 2025-06-06 02:09:14,710 | INFO     | sufficient remaining disk space (3269392859136 B)
[2025-06-06 04:09:44] 2025-06-06 02:09:14,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 04:09:44] 2025-06-06 02:09:14,712 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 04:09:44] 2025-06-06 02:09:14,713 | INFO     | update_server=False
[2025-06-06 04:09:44] 2025-06-06 02:09:14,713 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 04:09:44] 2025-06-06 02:09:14,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 04:09:44] 2025-06-06 02:09:14,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 04:09:44] 2025-06-06 02:09:14,824 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 04:09:44] 2025-06-06 02:09:14,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 04:09:44] 2025-06-06 02:09:14,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 04:09:44] 2025-06-06 02:09:15,037 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 04:09:44] 2025-06-06 02:09:15,038 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 04:09:44] 2025-06-06 02:09:15,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:09:44] 2025-06-06 02:09:15,038 | INFO     | will abort loop
[2025-06-06 04:09:44] 2025-06-06 02:09:15,086 | INFO     | all payload control threads have been joined
[2025-06-06 04:09:44] 2025-06-06 02:09:15,378 | INFO     | all data control threads have been joined
[2025-06-06 04:09:44] 2025-06-06 02:09:15,522 | INFO     | all job control threads have been joined
[2025-06-06 04:09:44] 2025-06-06 02:09:15,715 | INFO     | [job] retrieve thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:16,043 | INFO     | [job] job monitor thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:16,092 | INFO     | [payload] control thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:16,315 | INFO     | [job] validate thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:16,355 | INFO     | [payload] validate_post thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:16,383 | INFO     | [data] control thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:16,461 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:16,494 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:16,528 | INFO     | [job] control thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:16,719 | INFO     | [data] copytool_out thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:16,780 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:16,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:09:44] 2025-06-06 02:09:17,149 | INFO     | [data] copytool_in thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:17,213 | INFO     | [payload] failed_post thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:17,919 | INFO     | [job] queue monitor thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:18,718 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:25,334 | INFO     | job.realtimelogging is not enabled
[2025-06-06 04:09:44] 2025-06-06 02:09:26,339 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 04:09:44] 2025-06-06 02:09:27,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23439191328576)>', '<ExcThread(monitor, started 23438934603520)>']
[2025-06-06 04:09:44] 2025-06-06 02:09:27,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 04:09:44] 2025-06-06 02:09:27,886 | INFO     | [monitor] control thread has ended
[2025-06-06 04:09:44] 2025-06-06 02:09:32,355 | INFO     | all workflow threads have been joined
[2025-06-06 04:09:44] 2025-06-06 02:09:32,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 04:09:44] 2025-06-06 02:09:32,356 | INFO     | traces error code: 0
[2025-06-06 04:09:44] 2025-06-06 02:09:32,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 04:09:44] 2025-06-06 02:09:32,472 [wrapper] ==== pilot stdout END ====
[2025-06-06 04:09:44] 2025-06-06 02:09:32,478 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 04:09:44] 2025-06-06 02:09:32,481 [wrapper] pilotpid: 2662725
[2025-06-06 04:09:44] 2025-06-06 02:09:32,485 [wrapper] Pilot exit status: 0
[2025-06-06 04:09:44] 2025-06-06 02:09:32,498 [wrapper] pandaids: 6679478473
[2025-06-06 04:09:44] 2025-06-06 02:09:32,623 [wrapper] cleanup supervisor_pilot 3034652 2662727
[2025-06-06 04:09:44] 2025-06-06 02:09:32,627 [wrapper] Test setup, not cleaning
[2025-06-06 04:09:44] 2025-06-06 02:09:32,630 [wrapper] apfmon messages muted
[2025-06-06 04:09:44] 2025-06-06 02:09:32,634 [wrapper] ==== wrapper stdout END ====
[2025-06-06 04:09:44] 2025-06-06 02:09:32,638 [wrapper] ==== wrapper stderr END ====
[2025-06-06 04:09:44]  *** Error codes and diagnostics ***
[2025-06-06 04:09:44]     "exeErrorCode": 0,
[2025-06-06 04:09:44]     "exeErrorDiag": "",
[2025-06-06 04:09:44]     "pilotErrorCode": 0,
[2025-06-06 04:09:44]     "pilotErrorDiag": "",
[2025-06-06 04:09:44]  *** Listing of results directory ***
[2025-06-06 04:09:44] total 398964
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc    495897 Jun  4 11:04 pilot3.tar.gz
[2025-06-06 04:09:44] -rwx------ 1 boinc boinc     37140 Jun  4 11:08 runpilot2-wrapper.sh
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc      5111 Jun  4 11:08 queuedata.json
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc       100 Jun  6 01:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 04:09:44] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 01:52 run_atlas
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc       105 Jun  6 01:52 job.xml
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc      6686 Jun  6 01:52 init_data.xml
[2025-06-06 04:09:44] -rw-r--r-- 2 boinc boinc 215457165 Jun  6 01:52 EVNT.45006593._001732.pool.root.1
[2025-06-06 04:09:44] -rw-r--r-- 2 boinc boinc     15093 Jun  6 01:52 start_atlas.sh
[2025-06-06 04:09:44] drwxrwx--x 2 boinc boinc      4096 Jun  6 01:52 shared
[2025-06-06 04:09:44] -rw-r--r-- 2 boinc boinc    508877 Jun  6 01:52 input.tar.gz
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc         0 Jun  6 01:52 boinc_lockfile
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc      2525 Jun  6 01:52 pandaJob.out
[2025-06-06 04:09:44] -rw------- 1 boinc boinc    987721 Jun  6 01:52 agis_schedconf.cvmfs.json
[2025-06-06 04:09:44] -rw------- 1 boinc boinc   1598969 Jun  6 01:52 agis_ddmendpoints.agis.ALL.json
[2025-06-06 04:09:44] drwx------ 4 boinc boinc      4096 Jun  6 01:52 pilot3
[2025-06-06 04:09:44] -rw------- 1 boinc boinc 187131522 Jun  6 04:08 HITS.45006595._056372.pool.root.1
[2025-06-06 04:09:44] -rw------- 1 boinc boinc        95 Jun  6 04:08 pilot_heartbeat.json
[2025-06-06 04:09:44] -rw------- 1 boinc boinc      1025 Jun  6 04:08 memory_monitor_summary.json
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc       530 Jun  6 04:08 boinc_task_state.xml
[2025-06-06 04:09:44] -rw------- 1 boinc boinc    287085 Jun  6 04:09 log.45006595._056372.job.log.tgz.1
[2025-06-06 04:09:44] -rw------- 1 boinc boinc      7709 Jun  6 04:09 heartbeat.json
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc        27 Jun  6 04:09 wrapper_checkpoint.txt
[2025-06-06 04:09:44] -rw------- 1 boinc boinc      4622 Jun  6 04:09 pilotlog.txt
[2025-06-06 04:09:44] -rw------- 1 boinc boinc    769986 Jun  6 04:09 log.45006595._056372.job.log.1
[2025-06-06 04:09:44] -rw------- 1 boinc boinc       357 Jun  6 04:09 output.list
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc       620 Jun  6 04:09 runtime_log
[2025-06-06 04:09:44] -rw------- 1 boinc boinc   1075200 Jun  6 04:09 result.tar.gz
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc      9025 Jun  6 04:09 runtime_log.err
[2025-06-06 04:09:44] -rw------- 1 boinc boinc       662 Jun  6 04:09 n9aNDm4Hzg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmk1aKDmnCRnum.diag
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc      8192 Jun  6 04:09 boinc_mmap_file
[2025-06-06 04:09:44] -rw-r--r-- 1 boinc boinc     20902 Jun  6 04:09 stderr.txt
[2025-06-06 04:09:44] HITS file was successfully produced:
[2025-06-06 04:09:44] -rw------- 1 boinc boinc 187131522 Jun  6 04:08 shared/HITS.pool.root.1
[2025-06-06 04:09:44]  *** Contents of shared directory: ***
[2025-06-06 04:09:44] total 394732
[2025-06-06 04:09:44] -rw-r--r-- 2 boinc boinc 215457165 Jun  6 01:52 ATLAS.root_0
[2025-06-06 04:09:44] -rw-r--r-- 2 boinc boinc     15093 Jun  6 01:52 start_atlas.sh
[2025-06-06 04:09:44] -rw-r--r-- 2 boinc boinc    508877 Jun  6 01:52 input.tar.gz
[2025-06-06 04:09:44] -rw------- 1 boinc boinc 187131522 Jun  6 04:08 HITS.pool.root.1
[2025-06-06 04:09:44] -rw------- 1 boinc boinc   1075200 Jun  6 04:09 result.tar.gz
04:09:45 (2657000): run_atlas exited; CPU time 31503.295269
04:09:45 (2657000): called boinc_finish(0)

</stderr_txt>
]]>

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