Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:13:15 (14916): wrapper (7.7.26015): starting
09:13:15 (14916): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 09:13:15] Arguments: --nthreads 10
[2025-06-04 09:13:15] Threads: 10
[2025-06-04 09:13:15] Checking for CVMFS
[2025-06-04 09:13:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:13:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:13:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:13:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:13:17] 2.11.2.0 20863 94532 247140 146780 1 358 12786982 18432000 28366 130560 0 456313837 99.091 911766466 35532 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:13:17] CVMFS is ok
[2025-06-04 09:13:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:13:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:13:17] Further information can be found at the LHC@home message board.
[2025-06-04 09:13:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:13:18] Checking for apptainer binary...
[2025-06-04 09:13:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:13:18] Running /usr/bin/apptainer --version
[2025-06-04 09:13:18] apptainer version 1.3.2-1.el7
[2025-06-04 09:13:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:13:50] c-210-1.aglt2.org
[2025-06-04 09:13:50] apptainer works
[2025-06-04 09:13:50] Set ATHENA_PROC_NUMBER=10
[2025-06-04 09:13:50] Set ATHENA_CORE_NUMBER=10
[2025-06-04 09:13:50] Starting ATLAS job with PandaID=6679483691
[2025-06-04 09:13:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:14:28]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:14:28] 2025-06-05 06:14:02,529 | INFO     | mean y: 2549101.9597585513
[2025-06-05 02:14:28] 2025-06-05 06:14:02,529 | INFO     | -- intersect: -2823223746.7509484
[2025-06-05 02:14:28] 2025-06-05 06:14:02,529 | INFO     | intersect: -2823223746.7509484
[2025-06-05 02:14:28] 2025-06-05 06:14:02,539 | INFO     | chi2: 14.303555561283016
[2025-06-05 02:14:28] 2025-06-05 06:14:02,541 | INFO     | sum of square deviations: 299967367677.81
[2025-06-05 02:14:28] 2025-06-05 06:14:02,946 | INFO     | sum of deviations: 847717215382.742
[2025-06-05 02:14:28] 2025-06-05 06:14:02,985 | INFO     | mean x: 1749073453.091001
[2025-06-05 02:14:28] 2025-06-05 06:14:02,986 | INFO     | mean y: 2560965.847320526
[2025-06-05 02:14:28] 2025-06-05 06:14:02,986 | INFO     | -- intersect: -4940375622.997721
[2025-06-05 02:14:28] 2025-06-05 06:14:02,986 | INFO     | intersect: -4940375622.997721
[2025-06-05 02:14:28] 2025-06-05 06:14:03,016 | INFO     | chi2: 10.14188681981713
[2025-06-05 02:14:28] 2025-06-05 06:14:03,016 | INFO     | current chi2=10.14188681981713 (change=29.095344326348666 %)
[2025-06-05 02:14:28] 2025-06-05 06:14:03,085 | INFO     | sum of square deviations: 295441053787.2104
[2025-06-05 02:14:28] 2025-06-05 06:14:03,234 | INFO     | sum of deviations: 842590881330.6129
[2025-06-05 02:14:28] 2025-06-05 06:14:03,274 | INFO     | mean x: 1749073300.5945122
[2025-06-05 02:14:28] 2025-06-05 06:14:03,275 | INFO     | mean y: 2560793.224593496
[2025-06-05 02:14:28] 2025-06-05 06:14:03,275 | INFO     | -- intersect: -4985754794.49747
[2025-06-05 02:14:28] 2025-06-05 06:14:03,275 | INFO     | intersect: -4985754794.49747
[2025-06-05 02:14:28] 2025-06-05 06:14:03,285 | INFO     | chi2: 10.143675541471497
[2025-06-05 02:14:28] 2025-06-05 06:14:03,285 | INFO     | current chi2=10.143675541471497 (change=-0.01763697116864466 %)
[2025-06-05 02:14:28] 2025-06-05 06:14:03,285 | INFO     | right removable region: 983
[2025-06-05 02:14:28] 2025-06-05 06:14:03,301 | INFO     | sum of square deviations: 299966709487.81
[2025-06-05 02:14:28] 2025-06-05 06:14:03,385 | INFO     | monitor loop #2930: job 0:6679483691 is in state 'finished'
[2025-06-05 02:14:28] 2025-06-05 06:14:03,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:14:28] 2025-06-05 06:14:03,631 | INFO     | sum of deviations: 122989094516.07434
[2025-06-05 02:14:28] 2025-06-05 06:14:03,631 | INFO     | mean x: 1749073758.091001
[2025-06-05 02:14:28] 2025-06-05 06:14:03,632 | INFO     | mean y: 2561407.1880687564
[2025-06-05 02:14:28] 2025-06-05 06:14:03,632 | INFO     | -- intersect: -714574831.4190403
[2025-06-05 02:14:28] 2025-06-05 06:14:03,632 | INFO     | intersect: -714574831.4190403
[2025-06-05 02:14:28] 2025-06-05 06:14:03,641 | INFO     | chi2: 9.532828254236481
[2025-06-05 02:14:28] 2025-06-05 06:14:03,645 | INFO     | current chi2=9.532828254236481 (change=33.3534363998276 %)
[2025-06-05 02:14:28] 2025-06-05 06:14:03,647 | INFO     | sum of square deviations: 295439858306.8285
[2025-06-05 02:14:28] 2025-06-05 06:14:03,729 | INFO     | sum of deviations: -185413103356.8749
[2025-06-05 02:14:28] 2025-06-05 06:14:03,745 | INFO     | mean x: 1749073910.5965447
[2025-06-05 02:14:28] 2025-06-05 06:14:03,745 | INFO     | mean y: 2571795.625
[2025-06-05 02:14:28] 2025-06-05 06:14:03,745 | INFO     | -- intersect: 1100261266.5813804
[2025-06-05 02:14:28] 2025-06-05 06:14:03,745 | INFO     | intersect: 1100261266.5813804
[2025-06-05 02:14:28] 2025-06-05 06:14:03,747 | INFO     | chi2: 6.287612009612367
[2025-06-05 02:14:28] 2025-06-05 06:14:03,747 | INFO     | current chi2=6.287612009612367 (change=34.042533423193774 %)
[2025-06-05 02:14:28] 2025-06-05 06:14:03,759 | INFO     | sum of square deviations: 290958775425.78534
[2025-06-05 02:14:28] 2025-06-05 06:14:03,854 | INFO     | sum of deviations: -382657229246.6873
[2025-06-05 02:14:28] 2025-06-05 06:14:03,855 | INFO     | mean x: 1749074063.102145
[2025-06-05 02:14:28] 2025-06-05 06:14:03,855 | INFO     | mean y: 2578503.1368743614
[2025-06-05 02:14:28] 2025-06-05 06:14:03,855 | INFO     | -- intersect: 2302890063.6130047
[2025-06-05 02:14:28] 2025-06-05 06:14:03,855 | INFO     | intersect: 2302890063.6130047
[2025-06-05 02:14:28] 2025-06-05 06:14:03,864 | INFO     | chi2: 4.85546782693718
[2025-06-05 02:14:28] 2025-06-05 06:14:03,864 | INFO     | current chi2=4.85546782693718 (change=22.777235307868164 %)
[2025-06-05 02:14:28] 2025-06-05 06:14:03,864 | INFO     | left removable region: 30
[2025-06-05 02:14:28] 2025-06-05 06:14:03,866 | INFO     | sum of square deviations: 268387501476.36368
[2025-06-05 02:14:28] 2025-06-05 06:14:03,994 | INFO     | sum of deviations: -156147057717.079
[2025-06-05 02:14:28] 2025-06-05 06:14:04,036 | INFO     | mean x: 1749074185.1196222
[2025-06-05 02:14:28] 2025-06-05 06:14:04,037 | INFO     | mean y: 2595194.4480587617
[2025-06-05 02:14:28] 2025-06-05 06:14:04,037 | INFO     | -- intersect: 1020201402.7586907
[2025-06-05 02:14:28] 2025-06-05 06:14:04,037 | INFO     | intersect: 1020201402.7586907
[2025-06-05 02:14:28] 2025-06-05 06:14:04,091 | INFO     | chi2: 0.28336909597292476
[2025-06-05 02:14:28] 2025-06-05 06:14:04,105 | INFO     | -- intersect: 1020201402.7586907
[2025-06-05 02:14:28] 2025-06-05 06:14:04,105 | INFO     | current memory leak: -0.58 B/s (using 953 data points, chi2=0.28)
[2025-06-05 02:14:28] 2025-06-05 06:14:04,131 | INFO     | ..............................
[2025-06-05 02:14:28] 2025-06-05 06:14:04,132 | INFO     | . Timing measurements:
[2025-06-05 02:14:28] 2025-06-05 06:14:04,132 | INFO     | . get job = 1 s
[2025-06-05 02:14:28] 2025-06-05 06:14:04,132 | INFO     | . initial setup = 11 s
[2025-06-05 02:14:28] 2025-06-05 06:14:04,132 | INFO     | . payload setup = 119 s
[2025-06-05 02:14:28] 2025-06-05 06:14:04,133 | INFO     | . stage-in = 0 s
[2025-06-05 02:14:28] 2025-06-05 06:14:04,133 | INFO     | . payload execution = 60680 s
[2025-06-05 02:14:28] 2025-06-05 06:14:04,134 | INFO     | . stage-out = 13 s
[2025-06-05 02:14:28] 2025-06-05 06:14:04,134 | INFO     | . log creation = 3 s
[2025-06-05 02:14:28] 2025-06-05 06:14:04,134 | INFO     | ..............................
[2025-06-05 02:14:28] 2025-06-05 06:14:05,564 | INFO     | 
[2025-06-05 02:14:28] 2025-06-05 06:14:05,565 | INFO     | job summary report
[2025-06-05 02:14:28] 2025-06-05 06:14:05,565 | INFO     | --------------------------------------------------
[2025-06-05 02:14:28] 2025-06-05 06:14:05,565 | INFO     | PanDA job id: 6679483691
[2025-06-05 02:14:28] 2025-06-05 06:14:05,565 | INFO     | task id: 44871837
[2025-06-05 02:14:28] 2025-06-05 06:14:05,565 | INFO     | errors: (none)
[2025-06-05 02:14:28] 2025-06-05 06:14:05,565 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:14:28] 2025-06-05 06:14:05,565 | INFO     | pilot state: finished 
[2025-06-05 02:14:28] 2025-06-05 06:14:05,566 | INFO     | transexitcode: 0
[2025-06-05 02:14:28] 2025-06-05 06:14:05,566 | INFO     | exeerrorcode: 0
[2025-06-05 02:14:28] 2025-06-05 06:14:05,566 | INFO     | exeerrordiag: 
[2025-06-05 02:14:28] 2025-06-05 06:14:05,566 | INFO     | exitcode: 0
[2025-06-05 02:14:28] 2025-06-05 06:14:05,566 | INFO     | exitmsg: OK
[2025-06-05 02:14:28] 2025-06-05 06:14:05,566 | INFO     | cpuconsumptiontime: 71901 s
[2025-06-05 02:14:28] 2025-06-05 06:14:05,566 | INFO     | nevents: 400
[2025-06-05 02:14:28] 2025-06-05 06:14:05,566 | INFO     | neventsw: 0
[2025-06-05 02:14:28] 2025-06-05 06:14:05,566 | INFO     | pid: 811
[2025-06-05 02:14:28] 2025-06-05 06:14:05,566 | INFO     | pgrp: 811
[2025-06-05 02:14:28] 2025-06-05 06:14:05,567 | INFO     | corecount: 10
[2025-06-05 02:14:28] 2025-06-05 06:14:05,567 | INFO     | event service: False
[2025-06-05 02:14:28] 2025-06-05 06:14:05,567 | INFO     | sizes: {0: 2397171, 1: 2397199, 2: 2397398, 13: 2397398, 24: 2397454, 35: 2397482, 47: 2397638, 58: 2397694, 64: 2397928, 69: 2397984, 60806: 2447305, 60808: 24475
[2025-06-05 02:14:28] 2025-06-05 06:14:05,567 | INFO     | --------------------------------------------------
[2025-06-05 02:14:28] 2025-06-05 06:14:05,567 | INFO     | 
[2025-06-05 02:14:28] 2025-06-05 06:14:05,593 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 02:14:28] 2025-06-05 06:14:06,094 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,095 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,095 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,095 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,097 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:14:28] 2025-06-05 06:14:06,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,097 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:14:28] 2025-06-05 06:14:06,097 | INFO     | job 6679483691 has completed (purged errors)
[2025-06-05 02:14:28] 2025-06-05 06:14:06,097 | INFO     | overall cleanup function is called
[2025-06-05 02:14:28] 2025-06-05 06:14:07,112 | INFO     | --- collectZombieJob: --- 10, [811]
[2025-06-05 02:14:28] 2025-06-05 06:14:07,112 | INFO     | zombie collector waiting for pid 811
[2025-06-05 02:14:28] 2025-06-05 06:14:07,113 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:14:28] 2025-06-05 06:14:07,113 | INFO     | collected zombie processes
[2025-06-05 02:14:28] 2025-06-05 06:14:07,113 | INFO     | will attempt to kill all subprocesses of pid=811
[2025-06-05 02:14:28] 2025-06-05 06:14:08,664 | INFO     | process IDs to be killed: [811] (in reverse order)
[2025-06-05 02:14:28] 2025-06-05 06:14:09,949 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:14:28] 2025-06-05 06:14:09,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:14:28] 2025-06-05 06:14:10,198 | INFO     | did not find any defunct processes belonging to 811
[2025-06-05 02:14:28] 2025-06-05 06:14:10,324 | INFO     | did not find any defunct processes belonging to 811
[2025-06-05 02:14:28] 2025-06-05 06:14:10,325 | INFO     | ready for new job
[2025-06-05 02:14:28] 2025-06-05 06:14:10,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:14:28] 2025-06-05 06:14:10,357 | INFO     | **************************************
[2025-06-05 02:14:28] 2025-06-05 06:14:10,357 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:14:28] 2025-06-05 06:14:10,357 | INFO     | **************************************
[2025-06-05 02:14:28] 2025-06-05 06:14:10,357 | INFO     | 
[2025-06-05 02:14:28] 2025-06-05 06:14:10,388 | INFO     | architecture information:
[2025-06-05 02:14:28] 2025-06-05 06:14:10,403 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:14:28] 2025-06-05 06:14:10,550 | INFO     | cat /etc/os-release:
[2025-06-05 02:14:28] NAME="CentOS Linux"
[2025-06-05 02:14:28] VERSION="7 (Core)"
[2025-06-05 02:14:28] ID="centos"
[2025-06-05 02:14:28] ID_LIKE="rhel fedora"
[2025-06-05 02:14:28] VERSION_ID="7"
[2025-06-05 02:14:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:14:28] ANSI_COLOR="0;31"
[2025-06-05 02:14:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:14:28] HOME_URL="https://www.centos.org/"
[2025-06-05 02:14:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:14:28] 
[2025-06-05 02:14:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:14:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:14:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:14:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:14:28] 
[2025-06-05 02:14:28] 2025-06-05 06:14:10,550 | INFO     | **************************************
[2025-06-05 02:14:28] 2025-06-05 06:14:11,053 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 02:14:28] 2025-06-05 06:14:11,273 | INFO     | sufficient remaining disk space (56979619840 B)
[2025-06-05 02:14:28] 2025-06-05 06:14:11,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:14:28] 2025-06-05 06:14:11,274 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:14:28] 2025-06-05 06:14:11,274 | INFO     | update_server=False
[2025-06-05 02:14:28] 2025-06-05 06:14:11,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:14:28] 2025-06-05 06:14:11,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:14:28] 2025-06-05 06:14:11,280 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:14:28] 2025-06-05 06:14:11,280 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:14:28] 2025-06-05 06:14:11,280 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:14:28] 2025-06-05 06:14:11,280 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:14:28] 2025-06-05 06:14:11,548 | INFO     | all data control threads have been joined
[2025-06-05 02:14:28] 2025-06-05 06:14:11,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:14:28] 2025-06-05 06:14:12,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:14:28] 2025-06-05 06:14:12,164 | INFO     | aborting loop
[2025-06-05 02:14:28] 2025-06-05 06:14:12,280 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:12,287 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:12,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:14:28] 2025-06-05 06:14:12,462 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:12,467 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:12,508 | INFO     | all payload control threads have been joined
[2025-06-05 02:14:28] 2025-06-05 06:14:12,554 | INFO     | [data] control thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:12,737 | INFO     | all job control threads have been joined
[2025-06-05 02:14:28] 2025-06-05 06:14:12,901 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:12,909 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:13,003 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:13,164 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:13,171 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:13,215 | INFO     | [job] validate thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:13,513 | INFO     | [payload] control thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:13,668 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:13,743 | INFO     | [job] control thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:13,931 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:16,382 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:14:28] 2025-06-05 06:14:16,963 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139817557641024)>', '<ExcThread(monitor, started 139817258039040)>']
[2025-06-05 02:14:28] 2025-06-05 06:14:17,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:14:28] 2025-06-05 06:14:17,321 | INFO     | [monitor] control thread has ended
[2025-06-05 02:14:28] 2025-06-05 06:14:21,989 | INFO     | all workflow threads have been joined
[2025-06-05 02:14:28] 2025-06-05 06:14:21,990 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:14:28] 2025-06-05 06:14:21,990 | INFO     | traces error code: 0
[2025-06-05 02:14:28] 2025-06-05 06:14:21,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:14:28] 2025-06-05 06:14:23,555 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:14:28] 2025-06-05 06:14:23,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:14:28] 2025-06-05 06:14:23,645 [wrapper] pilotpid: 39717
[2025-06-05 02:14:28] 2025-06-05 06:14:23,690 [wrapper] Pilot exit status: 0
[2025-06-05 02:14:28] 2025-06-05 06:14:24,083 [wrapper] pandaids: 6679483691
[2025-06-05 02:14:28] 2025-06-05 06:14:24,956 [wrapper] cleanup supervisor_pilot  8620 39718
[2025-06-05 02:14:28] 2025-06-05 06:14:25,010 [wrapper] Test setup, not cleaning
[2025-06-05 02:14:28] 2025-06-05 06:14:25,063 [wrapper] apfmon messages muted
[2025-06-05 02:14:28] 2025-06-05 06:14:25,112 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:14:28] 2025-06-05 06:14:25,193 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:14:28]  *** Error codes and diagnostics ***
[2025-06-05 02:14:28]     "exeErrorCode": 0,
[2025-06-05 02:14:28]     "exeErrorDiag": "",
[2025-06-05 02:14:28]     "pilotErrorCode": 0,
[2025-06-05 02:14:28]     "pilotErrorDiag": "",
[2025-06-05 02:14:28]  *** Listing of results directory ***
[2025-06-05 02:14:28] total 424976
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 05:04 pilot3.tar.gz
[2025-06-05 02:14:28] -rwx------ 1 boincer umatlas     37140 Jun  4 05:08 runpilot2-wrapper.sh
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 05:08 queuedata.json
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:14:28] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:13 run_atlas
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:13 job.xml
[2025-06-05 02:14:28] -rw-r--r-- 2 boincer umatlas 223715831 Jun  4 09:13 EVNT.44871834._002158.pool.root.1
[2025-06-05 02:14:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:13 start_atlas.sh
[2025-06-05 02:14:28] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:13 shared
[2025-06-05 02:14:28] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 09:13 input.tar.gz
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:13 boinc_lockfile
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 09:13 pandaJob.out
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas    986819 Jun  4 09:16 agis_schedconf.cvmfs.json
[2025-06-05 02:14:28] drwx------ 4 boincer umatlas      4096 Jun  4 09:16 pilot3
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas 197890087 Jun  5 02:05 HITS.44871837._102193.pool.root.1
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas       531 Jun  5 02:06 boinc_task_state.xml
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas      6228 Jun  5 02:11 init_data.xml
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas      1063 Jun  5 02:11 memory_monitor_summary.json
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas   1598969 Jun  5 02:12 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas    781622 Jun  5 02:12 log.44871837._102193.job.log.tgz.1
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas        95 Jun  5 02:13 pilot_heartbeat.json
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas      7767 Jun  5 02:14 heartbeat.json
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas      4476 Jun  5 02:14 pilotlog.txt
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 02:14 boinc_mmap_file
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas        28 Jun  5 02:14 wrapper_checkpoint.txt
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas   4088742 Jun  5 02:14 log.44871837._102193.job.log.1
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas       357 Jun  5 02:14 output.list
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas       620 Jun  5 02:14 runtime_log
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas   4884480 Jun  5 02:14 result.tar.gz
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas       664 Jun  5 02:14 uVKNDm4Hzg7n9Rq4apOajLDm4fhM0noT9bVof3QYDme1aKDmdoAxXm.diag
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas      8657 Jun  5 02:14 runtime_log.err
[2025-06-05 02:14:28] -rw-r--r-- 1 boincer umatlas     20916 Jun  5 02:14 stderr.txt
[2025-06-05 02:14:28] HITS file was successfully produced:
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas 197890087 Jun  5 02:05 shared/HITS.pool.root.1
[2025-06-05 02:14:28]  *** Contents of shared directory: ***
[2025-06-05 02:14:28] total 417024
[2025-06-05 02:14:28] -rw-r--r-- 2 boincer umatlas 223715831 Jun  4 09:13 ATLAS.root_0
[2025-06-05 02:14:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:13 start_atlas.sh
[2025-06-05 02:14:28] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 09:13 input.tar.gz
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas 197890087 Jun  5 02:05 HITS.pool.root.1
[2025-06-05 02:14:28] -rw------- 1 boincer umatlas   4884480 Jun  5 02:14 result.tar.gz
02:14:30 (14916): run_atlas exited; CPU time 73877.691727
02:14:30 (14916): called boinc_finish(0)

</stderr_txt>
]]>

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