Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:27:45 (28259): wrapper (7.7.26015): starting
12:27:45 (28259): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 12:27:45] Arguments: --nthreads 12
[2025-06-04 12:27:45] Threads: 12
[2025-06-04 12:27:45] Checking for CVMFS
[2025-06-04 12:27:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:27:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:27:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:27:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:27:45] 2.10.0.0 29567 2809 113156 146789 3 56 15232215 16777216 922 130560 0 11397944 99.998 703207 7129 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-04 12:27:45] CVMFS is ok
[2025-06-04 12:27:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:27:45] Checking for apptainer binary...
[2025-06-04 12:27:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:27:45] Running /usr/bin/apptainer --version
[2025-06-04 12:27:45] apptainer version 1.3.6-150600.4.9.1
[2025-06-04 12:27:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:27:45] boinc-runner
[2025-06-04 12:27:45] apptainer works
[2025-06-04 12:27:45] Set ATHENA_PROC_NUMBER=12
[2025-06-04 12:27:45] Set ATHENA_CORE_NUMBER=12
[2025-06-04 12:27:45] Starting ATLAS job with PandaID=6679367312
[2025-06-04 12:27:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:57:38]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:57:38]  filetype=log
[2025-06-04 12:57:38]  guid=a5358a65-a739-44e2-a81f-1787f8dc089c
[2025-06-04 12:57:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:57:38]  is_altstaged=None
[2025-06-04 12:57:38]  is_tar=False
[2025-06-04 12:57:38]  lfn=log.45006595._056188.job.log.tgz.1
[2025-06-04 12:57:38]  mtime=0
[2025-06-04 12:57:38]  protocol_id=None
[2025-06-04 12:57:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:57:38]  replicas=None
[2025-06-04 12:57:38]  scope=mc23_13p6TeV
[2025-06-04 12:57:38]  status=None
[2025-06-04 12:57:38]  status_code=0
[2025-06-04 12:57:38]  storage_token=
[2025-06-04 12:57:38]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6679367312/log.45006595._056188.job.log.tgz.1
[2025-06-04 12:57:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/2a/log.45006595._056188.job.log.tgz.1
[2025-06-04 12:57:38]  workdir=None
[2025-06-04 12:57:38] ]
[2025-06-04 12:57:38] 2025-06-04 17:57:13,280 | INFO     | transferring file log.45006595._056188.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6679367312/log.45006595._056188.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 12:57:38] 2025-06-04 17:57:13,280 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6679367312/log.45006595._056188.job.log.tgz.1 /var/lib/boinc/slots/1/log.45006595._056188.job
[2025-06-04 12:57:38] 2025-06-04 17:57:13,292 | INFO     | adding to output.list: log.45006595._056188.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/2a/log.45006595._056188.job.log.tg
[2025-06-04 12:57:38] 2025-06-04 17:57:13,292 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:57:38] 2025-06-04 17:57:13,292 | INFO     | summary of transferred files:
[2025-06-04 12:57:38] 2025-06-04 17:57:13,292 | INFO     |  -- lfn=log.45006595._056188.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:57:38] 2025-06-04 17:57:13,293 | INFO     | stage-out finished correctly
[2025-06-04 12:57:38] 2025-06-04 17:57:13,323 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:57:38] 2025-06-04 17:57:14,856 | INFO     | job 6679367312 has state=finished
[2025-06-04 12:57:38] 2025-06-04 17:57:14,856 | INFO     | preparing for final server update for job 6679367312 in state='finished'
[2025-06-04 12:57:38] 2025-06-04 17:57:14,856 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:57:38] 2025-06-04 17:57:14,856 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:57:38] 2025-06-04 17:57:14,856 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:57:38] 2025-06-04 17:57:14,856 | INFO     | job 6679367312 has finished - writing final server update
[2025-06-04 12:57:38] 2025-06-04 17:57:14,856 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:57:38] 2025-06-04 17:57:14,858 | INFO     | executing command: lscpu
[2025-06-04 12:57:38] 2025-06-04 17:57:14,876 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:57:38] 2025-06-04 17:57:15,362 | INFO     | monitor loop #139: job 0:6679367312 is in state 'finished'
[2025-06-04 12:57:38] 2025-06-04 17:57:15,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:57:38] 2025-06-04 17:57:17,865 | INFO     | monitor loop #140: job 0:6679367312 is in state 'finished'
[2025-06-04 12:57:38] 2025-06-04 17:57:17,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:57:38] 2025-06-04 17:57:20,157 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:57:38] 2025-06-04 17:57:20,157 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6679367312/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:57:38] 2025-06-04 17:57:20,157 | INFO     | extracted standard info from prmon json
[2025-06-04 12:57:38] 2025-06-04 17:57:20,158 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:57:38] 2025-06-04 17:57:20,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:57:38] 2025-06-04 17:57:20,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:57:38] 2025-06-04 17:57:20,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:57:38] 2025-06-04 17:57:20,158 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:57:38] 2025-06-04 17:57:20,159 | INFO     | sum of square deviations: 3294945.5
[2025-06-04 12:57:38] 2025-06-04 17:57:20,159 | INFO     | sum of deviations: 117706941.99999999
[2025-06-04 12:57:38] 2025-06-04 17:57:20,159 | INFO     | mean x: 1749059036.5
[2025-06-04 12:57:38] 2025-06-04 17:57:20,159 | INFO     | mean y: 2911923.090909091
[2025-06-04 12:57:38] 2025-06-04 17:57:20,159 | INFO     | -- intersect: -62479575439.410645
[2025-06-04 12:57:38] 2025-06-04 17:57:20,159 | INFO     | intersect: -62479575439.410645
[2025-06-04 12:57:38] 2025-06-04 17:57:20,159 | INFO     | chi2: 2.4018305789443418e-05
[2025-06-04 12:57:38] 2025-06-04 17:57:20,159 | INFO     | -- intersect: -62479575439.410645
[2025-06-04 12:57:38] 2025-06-04 17:57:20,159 | INFO     | current memory leak: 35.72 B/s (using 22 data points, chi2=0.00)
[2025-06-04 12:57:38] 2025-06-04 17:57:20,159 | INFO     | ..............................
[2025-06-04 12:57:38] 2025-06-04 17:57:20,159 | INFO     | . Timing measurements:
[2025-06-04 12:57:38] 2025-06-04 17:57:20,160 | INFO     | . get job = 0 s
[2025-06-04 12:57:38] 2025-06-04 17:57:20,160 | INFO     | . initial setup = 3 s
[2025-06-04 12:57:38] 2025-06-04 17:57:20,160 | INFO     | . payload setup = 3 s
[2025-06-04 12:57:38] 2025-06-04 17:57:20,160 | INFO     | . stage-in = 0 s
[2025-06-04 12:57:38] 2025-06-04 17:57:20,160 | INFO     | . payload execution = 1740 s
[2025-06-04 12:57:38] 2025-06-04 17:57:20,160 | INFO     | . stage-out = 0 s
[2025-06-04 12:57:38] 2025-06-04 17:57:20,160 | INFO     | . log creation = 0 s
[2025-06-04 12:57:38] 2025-06-04 17:57:20,160 | INFO     | ..............................
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | 
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | job summary report
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | --------------------------------------------------
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | PanDA job id: 6679367312
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | task id: 45006595
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | errors: (none)
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | pilot state: finished 
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | transexitcode: 0
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | exeerrorcode: 0
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | exeerrordiag: 
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | exitcode: 0
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | exitmsg: OK
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | cpuconsumptiontime: 18498 s
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | nevents: 400
[2025-06-04 12:57:38] 2025-06-04 17:57:20,213 | INFO     | neventsw: 0
[2025-06-04 12:57:38] 2025-06-04 17:57:20,214 | INFO     | pid: 6791
[2025-06-04 12:57:38] 2025-06-04 17:57:20,214 | INFO     | pgrp: 6791
[2025-06-04 12:57:38] 2025-06-04 17:57:20,214 | INFO     | corecount: 12
[2025-06-04 12:57:38] 2025-06-04 17:57:20,214 | INFO     | event service: False
[2025-06-04 12:57:38] 2025-06-04 17:57:20,214 | INFO     | sizes: {0: 2397286, 2: 2397492, 10: 2397520, 1747: 2422360, 1748: 2431356, 1755: 2431470}
[2025-06-04 12:57:38] 2025-06-04 17:57:20,214 | INFO     | --------------------------------------------------
[2025-06-04 12:57:38] 2025-06-04 17:57:20,214 | INFO     | 
[2025-06-04 12:57:38] 2025-06-04 17:57:20,214 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-04 12:57:38] 2025-06-04 17:57:20,226 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,226 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | job 6679367312 has completed (purged errors)
[2025-06-04 12:57:38] 2025-06-04 17:57:20,227 | INFO     | overall cleanup function is called
[2025-06-04 12:57:38] 2025-06-04 17:57:21,234 | INFO     | --- collectZombieJob: --- 10, [6791]
[2025-06-04 12:57:38] 2025-06-04 17:57:21,234 | INFO     | zombie collector waiting for pid 6791
[2025-06-04 12:57:38] 2025-06-04 17:57:21,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:57:38] 2025-06-04 17:57:21,234 | INFO     | collected zombie processes
[2025-06-04 12:57:38] 2025-06-04 17:57:21,234 | INFO     | will attempt to kill all subprocesses of pid=6791
[2025-06-04 12:57:38] 2025-06-04 17:57:21,286 | INFO     | process IDs to be killed: [6791] (in reverse order)
[2025-06-04 12:57:38] 2025-06-04 17:57:21,316 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:57:38] 2025-06-04 17:57:21,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:57:38] 2025-06-04 17:57:21,320 | INFO     | did not find any defunct processes belonging to 6791
[2025-06-04 12:57:38] 2025-06-04 17:57:21,322 | INFO     | did not find any defunct processes belonging to 6791
[2025-06-04 12:57:38] 2025-06-04 17:57:21,322 | INFO     | ready for new job
[2025-06-04 12:57:38] 2025-06-04 17:57:21,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:57:38] 2025-06-04 17:57:21,323 | INFO     | **************************************
[2025-06-04 12:57:38] 2025-06-04 17:57:21,324 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:57:38] 2025-06-04 17:57:21,324 | INFO     | **************************************
[2025-06-04 12:57:38] 2025-06-04 17:57:21,324 | INFO     | 
[2025-06-04 12:57:38] 2025-06-04 17:57:21,325 | INFO     | architecture information:
[2025-06-04 12:57:38] 2025-06-04 17:57:21,325 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:57:38] 2025-06-04 17:57:21,335 | INFO     | cat /etc/os-release:
[2025-06-04 12:57:38] NAME="CentOS Linux"
[2025-06-04 12:57:38] VERSION="7 (Core)"
[2025-06-04 12:57:38] ID="centos"
[2025-06-04 12:57:38] ID_LIKE="rhel fedora"
[2025-06-04 12:57:38] VERSION_ID="7"
[2025-06-04 12:57:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:57:38] ANSI_COLOR="0;31"
[2025-06-04 12:57:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:57:38] HOME_URL="https://www.centos.org/"
[2025-06-04 12:57:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:57:38] 
[2025-06-04 12:57:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:57:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:57:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:57:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:57:38] 
[2025-06-04 12:57:38] 2025-06-04 17:57:21,335 | INFO     | **************************************
[2025-06-04 12:57:38] 2025-06-04 17:57:21,838 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-04 12:57:38] 2025-06-04 17:57:21,850 | INFO     | sufficient remaining disk space (3892514390016 B)
[2025-06-04 12:57:38] 2025-06-04 17:57:21,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:57:38] 2025-06-04 17:57:21,851 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:57:38] 2025-06-04 17:57:21,851 | INFO     | update_server=False
[2025-06-04 12:57:38] 2025-06-04 17:57:21,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:57:38] 2025-06-04 17:57:21,851 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:57:38] 2025-06-04 17:57:21,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:57:38] 2025-06-04 17:57:21,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:57:38] 2025-06-04 17:57:21,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:57:38] 2025-06-04 17:57:21,851 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:57:38] 2025-06-04 17:57:21,852 | INFO     | aborting loop
[2025-06-04 12:57:38] 2025-06-04 17:57:21,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:57:38] 2025-06-04 17:57:21,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:57:38] 2025-06-04 17:57:22,101 | INFO     | all payload control threads have been joined
[2025-06-04 12:57:38] 2025-06-04 17:57:22,607 | INFO     | all data control threads have been joined
[2025-06-04 12:57:38] 2025-06-04 17:57:22,854 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:22,854 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:22,856 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:23,058 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:23,102 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:23,106 | INFO     | [payload] control thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:23,462 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:23,553 | INFO     | all job control threads have been joined
[2025-06-04 12:57:38] 2025-06-04 17:57:23,612 | INFO     | [data] control thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:23,730 | INFO     | [job] validate thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:23,838 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:23,857 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:23,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:57:38] 2025-06-04 17:57:24,011 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:24,223 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:24,558 | INFO     | [job] control thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:27,883 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:32,530 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:57:38] 2025-06-04 17:57:33,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:57:38] 2025-06-04 17:57:33,755 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180106176320)>', '<ExcThread(monitor, started 140179478148864)>']
[2025-06-04 12:57:38] 2025-06-04 17:57:33,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:57:38] 2025-06-04 17:57:33,904 | INFO     | [monitor] control thread has ended
[2025-06-04 12:57:38] 2025-06-04 17:57:38,780 | INFO     | all workflow threads have been joined
[2025-06-04 12:57:38] 2025-06-04 17:57:38,781 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:57:38] 2025-06-04 17:57:38,781 | INFO     | traces error code: 0
[2025-06-04 12:57:38] 2025-06-04 17:57:38,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:57:38] 2025-06-04 17:57:38,854 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:57:38] 2025-06-04 17:57:38,856 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:57:38] 2025-06-04 17:57:38,858 [wrapper] pilotpid: 32148
[2025-06-04 12:57:38] 2025-06-04 17:57:38,860 [wrapper] Pilot exit status: 0
[2025-06-04 12:57:38] 2025-06-04 17:57:38,864 [wrapper] pandaids: 6679367312
[2025-06-04 12:57:38] 2025-06-04 17:57:38,878 [wrapper] cleanup supervisor_pilot 10071 32149
[2025-06-04 12:57:38] 2025-06-04 17:57:38,879 [wrapper] Test setup, not cleaning
[2025-06-04 12:57:38] 2025-06-04 17:57:38,880 [wrapper] apfmon messages muted
[2025-06-04 12:57:38] 2025-06-04 17:57:38,881 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:57:38] 2025-06-04 17:57:38,882 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:57:38]  *** Error codes and diagnostics ***
[2025-06-04 12:57:38]     "exeErrorCode": 0,
[2025-06-04 12:57:38]     "exeErrorDiag": "",
[2025-06-04 12:57:38]     "pilotErrorCode": 0,
[2025-06-04 12:57:38]     "pilotErrorDiag": "",
[2025-06-04 12:57:38]  *** Listing of results directory ***
[2025-06-04 12:57:38] total 389412
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc    495897 Jun  4 03:46 pilot3.tar.gz
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc      5111 Jun  4 03:58 queuedata.json
[2025-06-04 12:57:38] -rwx------ 1 boinc boinc     37140 Jun  4 03:58 runpilot2-wrapper.sh
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:57:38] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:27 run_atlas
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:27 job.xml
[2025-06-04 12:57:38] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:27 start_atlas.sh
[2025-06-04 12:57:38] drwxrwx--x 1 boinc boinc        76 Jun  4 12:27 shared
[2025-06-04 12:57:38] -rw-r--r-- 2 boinc boinc    508879 Jun  4 12:27 input.tar.gz
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc     10044 Jun  4 12:27 init_data.xml
[2025-06-04 12:57:38] -rw-r--r-- 2 boinc boinc 213410802 Jun  4 12:27 EVNT.45006593._000114.pool.root.1
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:27 boinc_lockfile
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc      2522 Jun  4 12:27 pandaJob.out
[2025-06-04 12:57:38] -rw------- 1 boinc boinc    990984 Jun  4 12:27 agis_schedconf.cvmfs.json
[2025-06-04 12:57:38] -rw------- 1 boinc boinc   1598969 Jun  4 12:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:57:38] drwx------ 1 boinc boinc       368 Jun  4 12:27 pilot3
[2025-06-04 12:57:38] -rw------- 1 boinc boinc 180437548 Jun  4 12:56 HITS.45006595._056188.pool.root.1
[2025-06-04 12:57:38] -rw------- 1 boinc boinc        95 Jun  4 12:57 pilot_heartbeat.json
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc       529 Jun  4 12:57 boinc_task_state.xml
[2025-06-04 12:57:38] -rw------- 1 boinc boinc      1024 Jun  4 12:57 memory_monitor_summary.json
[2025-06-04 12:57:38] -rw------- 1 boinc boinc    333639 Jun  4 12:57 log.45006595._056188.job.log.tgz.1
[2025-06-04 12:57:38] -rw------- 1 boinc boinc      7675 Jun  4 12:57 heartbeat.json
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc        27 Jun  4 12:57 wrapper_checkpoint.txt
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:57 boinc_mmap_file
[2025-06-04 12:57:38] -rw------- 1 boinc boinc      4550 Jun  4 12:57 pilotlog.txt
[2025-06-04 12:57:38] -rw------- 1 boinc boinc    208378 Jun  4 12:57 log.45006595._056188.job.log.1
[2025-06-04 12:57:38] -rw------- 1 boinc boinc       357 Jun  4 12:57 output.list
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:57 runtime_log
[2025-06-04 12:57:38] -rw------- 1 boinc boinc    563200 Jun  4 12:57 result.tar.gz
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc      8683 Jun  4 12:57 runtime_log.err
[2025-06-04 12:57:38] -rw------- 1 boinc boinc       652 Jun  4 12:57 NFPNDm17yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrtnKDmcjrqXo.diag
[2025-06-04 12:57:38] -rw-r--r-- 1 boinc boinc     20862 Jun  4 12:57 stderr.txt
[2025-06-04 12:57:38] HITS file was successfully produced:
[2025-06-04 12:57:38] -rw------- 1 boinc boinc 180437548 Jun  4 12:56 shared/HITS.pool.root.1
[2025-06-04 12:57:38]  *** Contents of shared directory: ***
[2025-06-04 12:57:38] total 385692
[2025-06-04 12:57:38] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:27 start_atlas.sh
[2025-06-04 12:57:38] -rw-r--r-- 2 boinc boinc    508879 Jun  4 12:27 input.tar.gz
[2025-06-04 12:57:38] -rw-r--r-- 2 boinc boinc 213410802 Jun  4 12:27 ATLAS.root_0
[2025-06-04 12:57:38] -rw------- 1 boinc boinc 180437548 Jun  4 12:56 HITS.pool.root.1
[2025-06-04 12:57:38] -rw------- 1 boinc boinc    563200 Jun  4 12:57 result.tar.gz
12:57:40 (28259): run_atlas exited; CPU time 18506.263542
12:57:40 (28259): called boinc_finish(0)

</stderr_txt>
]]>

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