Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:32:49 (31623): wrapper (7.7.26015): starting
11:32:49 (31623): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 11:32:49] Arguments: --nthreads 12
[2025-06-04 11:32:49] Threads: 12
[2025-06-04 11:32:49] Checking for CVMFS
[2025-06-04 11:32:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:32:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:32:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:32:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:32:50] 2.10.0.0 29567 2754 109844 146788 2 187 15224751 16777216 913 130560 0 11226792 99.998 701907 7198 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-04 11:32:50] CVMFS is ok
[2025-06-04 11:32:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:32:50] Checking for apptainer binary...
[2025-06-04 11:32:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:32:50] Running /usr/bin/apptainer --version
[2025-06-04 11:32:50] apptainer version 1.3.6-150600.4.9.1
[2025-06-04 11:32:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:32:50] boinc-runner
[2025-06-04 11:32:50] apptainer works
[2025-06-04 11:32:50] Set ATHENA_PROC_NUMBER=12
[2025-06-04 11:32:50] Set ATHENA_CORE_NUMBER=12
[2025-06-04 11:32:50] Starting ATLAS job with PandaID=6678390187
[2025-06-04 11:32:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:00:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:00:55]  filetype=log
[2025-06-04 12:00:55]  guid=de83ea94-844d-49c1-9bfd-b6483b9a3bf1
[2025-06-04 12:00:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:00:55]  is_altstaged=None
[2025-06-04 12:00:55]  is_tar=False
[2025-06-04 12:00:55]  lfn=log.45006595._054638.job.log.tgz.1
[2025-06-04 12:00:55]  mtime=0
[2025-06-04 12:00:55]  protocol_id=None
[2025-06-04 12:00:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:00:55]  replicas=None
[2025-06-04 12:00:55]  scope=mc23_13p6TeV
[2025-06-04 12:00:55]  status=None
[2025-06-04 12:00:55]  status_code=0
[2025-06-04 12:00:55]  storage_token=
[2025-06-04 12:00:55]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678390187/log.45006595._054638.job.log.tgz.1
[2025-06-04 12:00:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/cb/log.45006595._054638.job.log.tgz.1
[2025-06-04 12:00:55]  workdir=None
[2025-06-04 12:00:55] ]
[2025-06-04 12:00:55] 2025-06-04 17:00:34,176 | INFO     | transferring file log.45006595._054638.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678390187/log.45006595._054638.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 12:00:55] 2025-06-04 17:00:34,176 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678390187/log.45006595._054638.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._054638.job
[2025-06-04 12:00:55] 2025-06-04 17:00:34,187 | INFO     | adding to output.list: log.45006595._054638.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/cb/log.45006595._054638.job.log.tg
[2025-06-04 12:00:55] 2025-06-04 17:00:34,188 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:00:55] 2025-06-04 17:00:34,188 | INFO     | summary of transferred files:
[2025-06-04 12:00:55] 2025-06-04 17:00:34,188 | INFO     |  -- lfn=log.45006595._054638.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:00:55] 2025-06-04 17:00:34,188 | INFO     | stage-out finished correctly
[2025-06-04 12:00:55] 2025-06-04 17:00:34,224 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:00:55] 2025-06-04 17:00:34,859 | INFO     | job 6678390187 has state=finished
[2025-06-04 12:00:55] 2025-06-04 17:00:34,859 | INFO     | preparing for final server update for job 6678390187 in state='finished'
[2025-06-04 12:00:55] 2025-06-04 17:00:34,860 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:00:55] 2025-06-04 17:00:34,860 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:00:55] 2025-06-04 17:00:34,860 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:00:55] 2025-06-04 17:00:34,860 | INFO     | job 6678390187 has finished - writing final server update
[2025-06-04 12:00:55] 2025-06-04 17:00:34,860 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:00:55] 2025-06-04 17:00:34,866 | INFO     | executing command: lscpu
[2025-06-04 12:00:55] 2025-06-04 17:00:34,889 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:00:55] 2025-06-04 17:00:35,979 | INFO     | monitor loop #132: job 0:6678390187 is in state 'finished'
[2025-06-04 12:00:55] 2025-06-04 17:00:35,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:00:55] 2025-06-04 17:00:36,942 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:00:55] 2025-06-04 17:00:36,942 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678390187/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:00:55] 2025-06-04 17:00:36,942 | INFO     | extracted standard info from prmon json
[2025-06-04 12:00:55] 2025-06-04 17:00:36,942 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:00:55] 2025-06-04 17:00:36,942 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:00:55] 2025-06-04 17:00:36,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:00:55] 2025-06-04 17:00:36,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:00:55] 2025-06-04 17:00:36,943 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:00:55] 2025-06-04 17:00:36,943 | INFO     | sum of square deviations: 2474465.0
[2025-06-04 12:00:55] 2025-06-04 17:00:36,943 | INFO     | sum of deviations: 63116120.5
[2025-06-04 12:00:55] 2025-06-04 17:00:36,943 | INFO     | mean x: 1749055679.5
[2025-06-04 12:00:55] 2025-06-04 17:00:36,943 | INFO     | mean y: 2910488.75
[2025-06-04 12:00:55] 2025-06-04 17:00:36,943 | INFO     | -- intersect: -44610211551.178375
[2025-06-04 12:00:55] 2025-06-04 17:00:36,943 | INFO     | intersect: -44610211551.178375
[2025-06-04 12:00:55] 2025-06-04 17:00:36,943 | INFO     | chi2: 1.0239968323924133e-05
[2025-06-04 12:00:55] 2025-06-04 17:00:36,943 | INFO     | -- intersect: -44610211551.178375
[2025-06-04 12:00:55] 2025-06-04 17:00:36,944 | INFO     | current memory leak: 25.51 B/s (using 20 data points, chi2=0.00)
[2025-06-04 12:00:55] 2025-06-04 17:00:36,944 | INFO     | ..............................
[2025-06-04 12:00:55] 2025-06-04 17:00:36,944 | INFO     | . Timing measurements:
[2025-06-04 12:00:55] 2025-06-04 17:00:36,944 | INFO     | . get job = 0 s
[2025-06-04 12:00:55] 2025-06-04 17:00:36,944 | INFO     | . initial setup = 2 s
[2025-06-04 12:00:55] 2025-06-04 17:00:36,944 | INFO     | . payload setup = 3 s
[2025-06-04 12:00:55] 2025-06-04 17:00:36,944 | INFO     | . stage-in = 0 s
[2025-06-04 12:00:55] 2025-06-04 17:00:36,944 | INFO     | . payload execution = 1638 s
[2025-06-04 12:00:55] 2025-06-04 17:00:36,944 | INFO     | . stage-out = 0 s
[2025-06-04 12:00:55] 2025-06-04 17:00:36,944 | INFO     | . log creation = 0 s
[2025-06-04 12:00:55] 2025-06-04 17:00:36,944 | INFO     | ..............................
[2025-06-04 12:00:55] 2025-06-04 17:00:37,112 | INFO     | 
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | job summary report
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | --------------------------------------------------
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | PanDA job id: 6678390187
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | task id: 45006595
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | errors: (none)
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | pilot state: finished 
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | transexitcode: 0
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | exeerrorcode: 0
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | exeerrordiag: 
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | exitcode: 0
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | exitmsg: OK
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | cpuconsumptiontime: 17767 s
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | nevents: 400
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | neventsw: 0
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | pid: 10160
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | pgrp: 10160
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | corecount: 12
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | event service: False
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | sizes: {0: 2397171, 1: 2397370, 3: 2397576, 11: 2397604, 1645: 2431332, 1648: 2431446}
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | --------------------------------------------------
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | 
[2025-06-04 12:00:55] 2025-06-04 17:00:37,113 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 12:00:55] 2025-06-04 17:00:37,126 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,126 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,126 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,126 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:00:55] 2025-06-04 17:00:37,127 | INFO     | job 6678390187 has completed (purged errors)
[2025-06-04 12:00:55] 2025-06-04 17:00:37,128 | INFO     | overall cleanup function is called
[2025-06-04 12:00:55] 2025-06-04 17:00:38,134 | INFO     | --- collectZombieJob: --- 10, [10160]
[2025-06-04 12:00:55] 2025-06-04 17:00:38,134 | INFO     | zombie collector waiting for pid 10160
[2025-06-04 12:00:55] 2025-06-04 17:00:38,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:00:55] 2025-06-04 17:00:38,134 | INFO     | collected zombie processes
[2025-06-04 12:00:55] 2025-06-04 17:00:38,134 | INFO     | will attempt to kill all subprocesses of pid=10160
[2025-06-04 12:00:55] 2025-06-04 17:00:38,189 | INFO     | process IDs to be killed: [10160] (in reverse order)
[2025-06-04 12:00:55] 2025-06-04 17:00:38,210 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:00:55] 2025-06-04 17:00:38,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:00:55] 2025-06-04 17:00:38,213 | INFO     | did not find any defunct processes belonging to 10160
[2025-06-04 12:00:55] 2025-06-04 17:00:38,216 | INFO     | did not find any defunct processes belonging to 10160
[2025-06-04 12:00:55] 2025-06-04 17:00:38,216 | INFO     | ready for new job
[2025-06-04 12:00:55] 2025-06-04 17:00:38,216 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:00:55] 2025-06-04 17:00:38,218 | INFO     | **************************************
[2025-06-04 12:00:55] 2025-06-04 17:00:38,218 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:00:55] 2025-06-04 17:00:38,218 | INFO     | **************************************
[2025-06-04 12:00:55] 2025-06-04 17:00:38,218 | INFO     | 
[2025-06-04 12:00:55] 2025-06-04 17:00:38,219 | INFO     | architecture information:
[2025-06-04 12:00:55] 2025-06-04 17:00:38,219 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:00:55] 2025-06-04 17:00:38,230 | INFO     | cat /etc/os-release:
[2025-06-04 12:00:55] NAME="CentOS Linux"
[2025-06-04 12:00:55] VERSION="7 (Core)"
[2025-06-04 12:00:55] ID="centos"
[2025-06-04 12:00:55] ID_LIKE="rhel fedora"
[2025-06-04 12:00:55] VERSION_ID="7"
[2025-06-04 12:00:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:00:55] ANSI_COLOR="0;31"
[2025-06-04 12:00:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:00:55] HOME_URL="https://www.centos.org/"
[2025-06-04 12:00:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:00:55] 
[2025-06-04 12:00:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:00:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:00:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:00:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:00:55] 
[2025-06-04 12:00:55] 2025-06-04 17:00:38,230 | INFO     | **************************************
[2025-06-04 12:00:55] 2025-06-04 17:00:38,728 | INFO     | PID=3143 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 12:00:55] 2025-06-04 17:00:38,728 | INFO     | .. there are 2 such processes running
[2025-06-04 12:00:55] 2025-06-04 17:00:38,730 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 12:00:55] 2025-06-04 17:00:38,742 | INFO     | sufficient remaining disk space (3891266584576 B)
[2025-06-04 12:00:55] 2025-06-04 17:00:38,742 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:00:55] 2025-06-04 17:00:38,743 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:00:55] 2025-06-04 17:00:38,743 | INFO     | update_server=False
[2025-06-04 12:00:55] 2025-06-04 17:00:38,743 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:00:55] 2025-06-04 17:00:38,743 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:00:55] 2025-06-04 17:00:38,743 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:00:55] 2025-06-04 17:00:38,743 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:00:55] 2025-06-04 17:00:38,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:00:55] 2025-06-04 17:00:38,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:00:55] 2025-06-04 17:00:39,107 | INFO     | all data control threads have been joined
[2025-06-04 12:00:55] 2025-06-04 17:00:39,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:00:55] 2025-06-04 17:00:39,491 | INFO     | aborting loop
[2025-06-04 12:00:55] 2025-06-04 17:00:39,539 | INFO     | all payload control threads have been joined
[2025-06-04 12:00:55] 2025-06-04 17:00:39,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:00:55] 2025-06-04 17:00:39,746 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:39,748 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:39,866 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:40,110 | INFO     | [data] control thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:40,118 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:40,242 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:40,248 | INFO     | all job control threads have been joined
[2025-06-04 12:00:55] 2025-06-04 17:00:40,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:00:55] 2025-06-04 17:00:40,483 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:40,494 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:40,544 | INFO     | [payload] control thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:40,896 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:41,083 | INFO     | [job] validate thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:41,253 | INFO     | [job] control thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:41,336 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:41,738 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:44,259 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:48,894 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:00:55] 2025-06-04 17:00:49,898 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:00:55] 2025-06-04 17:00:50,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140391447185216)>', '<ExcThread(monitor, started 140391089149696)>']
[2025-06-04 12:00:55] 2025-06-04 17:00:50,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:00:55] 2025-06-04 17:00:50,801 | INFO     | [monitor] control thread has ended
[2025-06-04 12:00:55] 2025-06-04 17:00:55,433 | INFO     | all workflow threads have been joined
[2025-06-04 12:00:55] 2025-06-04 17:00:55,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:00:55] 2025-06-04 17:00:55,433 | INFO     | traces error code: 0
[2025-06-04 12:00:55] 2025-06-04 17:00:55,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:00:55] 2025-06-04 17:00:55,476 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:00:55] 2025-06-04 17:00:55,478 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:00:55] 2025-06-04 17:00:55,480 [wrapper] pilotpid: 3143
[2025-06-04 12:00:55] 2025-06-04 17:00:55,481 [wrapper] Pilot exit status: 0
[2025-06-04 12:00:55] 2025-06-04 17:00:55,486 [wrapper] pandaids: 6678390187
[2025-06-04 12:00:55] 2025-06-04 17:00:55,498 [wrapper] cleanup supervisor_pilot 26076 3144
[2025-06-04 12:00:55] 2025-06-04 17:00:55,499 [wrapper] Test setup, not cleaning
[2025-06-04 12:00:55] 2025-06-04 17:00:55,500 [wrapper] apfmon messages muted
[2025-06-04 12:00:55] 2025-06-04 17:00:55,502 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:00:55] 2025-06-04 17:00:55,503 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:00:55]  *** Error codes and diagnostics ***
[2025-06-04 12:00:55]     "exeErrorCode": 0,
[2025-06-04 12:00:55]     "exeErrorDiag": "",
[2025-06-04 12:00:55]     "pilotErrorCode": 0,
[2025-06-04 12:00:55]     "pilotErrorDiag": "",
[2025-06-04 12:00:55]  *** Listing of results directory ***
[2025-06-04 12:00:55] total 388140
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:59 pilot3.tar.gz
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:40 queuedata.json
[2025-06-04 12:00:55] -rwx------ 1 boinc boinc     37140 Jun  4 01:42 runpilot2-wrapper.sh
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:00:55] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:32 run_atlas
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:32 job.xml
[2025-06-04 12:00:55] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:32 start_atlas.sh
[2025-06-04 12:00:55] drwxrwx--x 1 boinc boinc        76 Jun  4 11:32 shared
[2025-06-04 12:00:55] -rw-r--r-- 2 boinc boinc    508886 Jun  4 11:32 input.tar.gz
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc     10044 Jun  4 11:32 init_data.xml
[2025-06-04 12:00:55] -rw-r--r-- 2 boinc boinc 214248470 Jun  4 11:32 EVNT.45006593._002186.pool.root.1
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:32 boinc_lockfile
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc      2525 Jun  4 11:32 pandaJob.out
[2025-06-04 12:00:55] -rw------- 1 boinc boinc    990984 Jun  4 11:32 agis_schedconf.cvmfs.json
[2025-06-04 12:00:55] -rw------- 1 boinc boinc   1598969 Jun  4 11:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:00:55] drwx------ 1 boinc boinc       368 Jun  4 11:32 pilot3
[2025-06-04 12:00:55] -rw------- 1 boinc boinc        95 Jun  4 12:00 pilot_heartbeat.json
[2025-06-04 12:00:55] -rw------- 1 boinc boinc 178322886 Jun  4 12:00 HITS.45006595._054638.pool.root.1
[2025-06-04 12:00:55] -rw------- 1 boinc boinc      1023 Jun  4 12:00 memory_monitor_summary.json
[2025-06-04 12:00:55] -rw------- 1 boinc boinc    335717 Jun  4 12:00 log.45006595._054638.job.log.tgz.1
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc       529 Jun  4 12:00 boinc_task_state.xml
[2025-06-04 12:00:55] -rw------- 1 boinc boinc      7681 Jun  4 12:00 heartbeat.json
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc        27 Jun  4 12:00 wrapper_checkpoint.txt
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:00 boinc_mmap_file
[2025-06-04 12:00:55] -rw------- 1 boinc boinc      4941 Jun  4 12:00 pilotlog.txt
[2025-06-04 12:00:55] -rw------- 1 boinc boinc    198892 Jun  4 12:00 log.45006595._054638.job.log.1
[2025-06-04 12:00:55] -rw------- 1 boinc boinc       357 Jun  4 12:00 output.list
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:00 runtime_log
[2025-06-04 12:00:55] -rw------- 1 boinc boinc    552960 Jun  4 12:00 result.tar.gz
[2025-06-04 12:00:55] -rw------- 1 boinc boinc       651 Jun  4 12:00 07gMDm00wg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHanKDmFudeXo.diag
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc      8683 Jun  4 12:00 runtime_log.err
[2025-06-04 12:00:55] -rw-r--r-- 1 boinc boinc     20914 Jun  4 12:00 stderr.txt
[2025-06-04 12:00:55] HITS file was successfully produced:
[2025-06-04 12:00:55] -rw------- 1 boinc boinc 178322886 Jun  4 12:00 shared/HITS.pool.root.1
[2025-06-04 12:00:55]  *** Contents of shared directory: ***
[2025-06-04 12:00:55] total 384428
[2025-06-04 12:00:55] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:32 start_atlas.sh
[2025-06-04 12:00:55] -rw-r--r-- 2 boinc boinc    508886 Jun  4 11:32 input.tar.gz
[2025-06-04 12:00:55] -rw-r--r-- 2 boinc boinc 214248470 Jun  4 11:32 ATLAS.root_0
[2025-06-04 12:00:55] -rw------- 1 boinc boinc 178322886 Jun  4 12:00 HITS.pool.root.1
[2025-06-04 12:00:55] -rw------- 1 boinc boinc    552960 Jun  4 12:00 result.tar.gz
12:00:57 (31623): run_atlas exited; CPU time 17773.632678
12:00:57 (31623): called boinc_finish(0)

</stderr_txt>
]]>

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