Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:15:17 (480924): wrapper (7.7.26015): starting
09:15:17 (480924): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:15:17] Arguments: --nthreads 8
[2025-06-04 09:15:17] Threads: 8
[2025-06-04 09:15:17] Checking for CVMFS
[2025-06-04 09:15:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:15:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:15:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:15:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:15:18] 2.12.6.0 5755 1385 225088 146780 0 757 16567523 32935937 36186 16776704 0 20646199 99.716 11377754 22109 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:15:18] CVMFS is ok
[2025-06-04 09:15:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:15:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:15:18] Further information can be found at the LHC@home message board.
[2025-06-04 09:15:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:15:18] Checking for apptainer binary...
[2025-06-04 09:15:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:15:18] Running /usr/bin/apptainer --version
[2025-06-04 09:15:18] apptainer version 1.4.1-1.el9
[2025-06-04 09:15:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:15:18] c7-3-34.aglt2.org
[2025-06-04 09:15:18] apptainer works
[2025-06-04 09:15:18] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:15:18] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:15:18] Starting ATLAS job with PandaID=6679438270
[2025-06-04 09:15:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:33:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:33:42]  lfn=log.45006595._056305.job.log.tgz.1
[2025-06-04 10:33:42]  mtime=0
[2025-06-04 10:33:42]  protocol_id=None
[2025-06-04 10:33:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:33:42]  replicas=None
[2025-06-04 10:33:42]  scope=mc23_13p6TeV
[2025-06-04 10:33:42]  status=None
[2025-06-04 10:33:42]  status_code=0
[2025-06-04 10:33:42]  storage_token=
[2025-06-04 10:33:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679438270/log.45006595._056305.job.log.tgz.1
[2025-06-04 10:33:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/e2/log.45006595._056305.job.log.tgz.1
[2025-06-04 10:33:42]  workdir=None
[2025-06-04 10:33:42] ]
[2025-06-04 10:33:42] 2025-06-04 14:33:21,075 | INFO     | transferring file log.45006595._056305.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679438270/log.45006595._056305.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:33:42] 2025-06-04 14:33:21,075 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679438270/log.45006595._056305.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056305.job
[2025-06-04 10:33:42] 2025-06-04 14:33:21,080 | INFO     | monitor loop #317: job 0:6679438270 is in state 'stageout'
[2025-06-04 10:33:42] 2025-06-04 14:33:21,080 | WARNING  | aborting job monitor tasks since payload process 491427 is not running
[2025-06-04 10:33:42] 2025-06-04 14:33:21,096 | INFO     | adding to output.list: log.45006595._056305.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/e2/log.45006595._056305.job.log.tg
[2025-06-04 10:33:42] 2025-06-04 14:33:21,096 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:33:42] 2025-06-04 14:33:21,097 | INFO     | summary of transferred files:
[2025-06-04 10:33:42] 2025-06-04 14:33:21,097 | INFO     |  -- lfn=log.45006595._056305.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:33:42] 2025-06-04 14:33:21,097 | INFO     | stage-out finished correctly
[2025-06-04 10:33:42] 2025-06-04 14:33:22,152 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:33:42] 2025-06-04 14:33:22,339 | INFO     | PID=484522 has CPU usage=15.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 10:33:42] 2025-06-04 14:33:22,339 | INFO     | .. there are 48 such processes running
[2025-06-04 10:33:42] 2025-06-04 14:33:23,584 | INFO     | monitor loop #318: job 0:6679438270 is in state 'finished'
[2025-06-04 10:33:42] 2025-06-04 14:33:23,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:33:42] 2025-06-04 14:33:24,534 | INFO     | job 6679438270 has state=finished
[2025-06-04 10:33:42] 2025-06-04 14:33:24,535 | INFO     | preparing for final server update for job 6679438270 in state='finished'
[2025-06-04 10:33:42] 2025-06-04 14:33:24,542 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:33:42] 2025-06-04 14:33:24,542 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:33:42] 2025-06-04 14:33:24,542 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:33:42] 2025-06-04 14:33:24,543 | INFO     | job 6679438270 has finished - writing final server update
[2025-06-04 10:33:42] 2025-06-04 14:33:24,544 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:33:42] 2025-06-04 14:33:24,551 | INFO     | executing command: lscpu
[2025-06-04 10:33:42] 2025-06-04 14:33:24,624 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:33:42] 2025-06-04 14:33:26,089 | INFO     | monitor loop #319: job 0:6679438270 is in state 'finished'
[2025-06-04 10:33:42] 2025-06-04 14:33:26,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:33:42] 2025-06-04 14:33:28,593 | INFO     | monitor loop #320: job 0:6679438270 is in state 'finished'
[2025-06-04 10:33:42] 2025-06-04 14:33:28,593 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:33:42] 2025-06-04 14:33:30,382 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:33:42] 2025-06-04 14:33:30,382 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679438270/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:33:42] 2025-06-04 14:33:30,383 | INFO     | extracted standard info from prmon json
[2025-06-04 10:33:42] 2025-06-04 14:33:30,383 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:33:42] 2025-06-04 14:33:30,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:33:42] 2025-06-04 14:33:30,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:33:42] 2025-06-04 14:33:30,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:33:42] 2025-06-04 14:33:30,385 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:33:42] 2025-06-04 14:33:30,385 | INFO     | sum of square deviations: 101843770.0
[2025-06-04 10:33:42] 2025-06-04 14:33:30,386 | INFO     | sum of deviations: 4584752801.999999
[2025-06-04 10:33:42] 2025-06-04 14:33:30,386 | INFO     | mean x: 1749045353.0
[2025-06-04 10:33:42] 2025-06-04 14:33:30,386 | INFO     | mean y: 2300648.217391304
[2025-06-04 10:33:42] 2025-06-04 14:33:30,386 | INFO     | -- intersect: -78735363746.88333
[2025-06-04 10:33:42] 2025-06-04 14:33:30,386 | INFO     | intersect: -78735363746.88333
[2025-06-04 10:33:42] 2025-06-04 14:33:30,386 | INFO     | chi2: 0.8237819009712326
[2025-06-04 10:33:42] 2025-06-04 14:33:30,386 | INFO     | -- intersect: -78735363746.88333
[2025-06-04 10:33:42] 2025-06-04 14:33:30,386 | INFO     | current memory leak: 45.02 B/s (using 69 data points, chi2=0.82)
[2025-06-04 10:33:42] 2025-06-04 14:33:30,387 | INFO     | ..............................
[2025-06-04 10:33:42] 2025-06-04 14:33:30,387 | INFO     | . Timing measurements:
[2025-06-04 10:33:42] 2025-06-04 14:33:30,387 | INFO     | . get job = 0 s
[2025-06-04 10:33:42] 2025-06-04 14:33:30,387 | INFO     | . initial setup = 2 s
[2025-06-04 10:33:42] 2025-06-04 14:33:30,387 | INFO     | . payload setup = 9 s
[2025-06-04 10:33:42] 2025-06-04 14:33:30,387 | INFO     | . stage-in = 0 s
[2025-06-04 10:33:42] 2025-06-04 14:33:30,387 | INFO     | . payload execution = 4632 s
[2025-06-04 10:33:42] 2025-06-04 14:33:30,387 | INFO     | . stage-out = 0 s
[2025-06-04 10:33:42] 2025-06-04 14:33:30,387 | INFO     | . log creation = 0 s
[2025-06-04 10:33:42] 2025-06-04 14:33:30,387 | INFO     | ..............................
[2025-06-04 10:33:42] 2025-06-04 14:33:30,456 | INFO     | 
[2025-06-04 10:33:42] 2025-06-04 14:33:30,456 | INFO     | job summary report
[2025-06-04 10:33:42] 2025-06-04 14:33:30,456 | INFO     | --------------------------------------------------
[2025-06-04 10:33:42] 2025-06-04 14:33:30,456 | INFO     | PanDA job id: 6679438270
[2025-06-04 10:33:42] 2025-06-04 14:33:30,456 | INFO     | task id: 45006595
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | errors: (none)
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | pilot state: finished 
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | transexitcode: 0
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | exeerrorcode: 0
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | exeerrordiag: 
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | exitcode: 0
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | exitmsg: OK
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | cpuconsumptiontime: 29006 s
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | nevents: 400
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | neventsw: 0
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | pid: 491427
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | pgrp: 491427
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | corecount: 8
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | event service: False
[2025-06-04 10:33:42] 2025-06-04 14:33:30,457 | INFO     | sizes: {0: 2397292, 9: 2397498, 11: 2397526, 4646: 2423609, 4647: 2432550, 4648: 2432606, 4656: 2432904}
[2025-06-04 10:33:42] 2025-06-04 14:33:30,458 | INFO     | --------------------------------------------------
[2025-06-04 10:33:42] 2025-06-04 14:33:30,458 | INFO     | 
[2025-06-04 10:33:42] 2025-06-04 14:33:30,458 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:33:42] 2025-06-04 14:33:30,477 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:33:42] 2025-06-04 14:33:30,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:33:42] 2025-06-04 14:33:30,480 | INFO     | job 6679438270 has completed (purged errors)
[2025-06-04 10:33:42] 2025-06-04 14:33:30,480 | INFO     | overall cleanup function is called
[2025-06-04 10:33:42] 2025-06-04 14:33:31,488 | INFO     | --- collectZombieJob: --- 10, [491427]
[2025-06-04 10:33:42] 2025-06-04 14:33:31,488 | INFO     | zombie collector waiting for pid 491427
[2025-06-04 10:33:42] 2025-06-04 14:33:31,489 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:33:42] 2025-06-04 14:33:31,489 | INFO     | collected zombie processes
[2025-06-04 10:33:42] 2025-06-04 14:33:31,489 | INFO     | will attempt to kill all subprocesses of pid=491427
[2025-06-04 10:33:42] 2025-06-04 14:33:31,952 | INFO     | process IDs to be killed: [491427] (in reverse order)
[2025-06-04 10:33:42] 2025-06-04 14:33:32,136 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:33:42] 2025-06-04 14:33:32,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:33:42] 2025-06-04 14:33:32,159 | INFO     | did not find any defunct processes belonging to 491427
[2025-06-04 10:33:42] 2025-06-04 14:33:32,183 | INFO     | did not find any defunct processes belonging to 491427
[2025-06-04 10:33:42] 2025-06-04 14:33:32,183 | INFO     | ready for new job
[2025-06-04 10:33:42] 2025-06-04 14:33:32,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:33:42] 2025-06-04 14:33:32,184 | INFO     | **************************************
[2025-06-04 10:33:42] 2025-06-04 14:33:32,184 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:33:42] 2025-06-04 14:33:32,184 | INFO     | **************************************
[2025-06-04 10:33:42] 2025-06-04 14:33:32,185 | INFO     | 
[2025-06-04 10:33:42] 2025-06-04 14:33:32,201 | INFO     | architecture information:
[2025-06-04 10:33:42] 2025-06-04 14:33:32,202 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:33:42] 2025-06-04 14:33:32,217 | INFO     | cat /etc/os-release:
[2025-06-04 10:33:42] NAME="CentOS Linux"
[2025-06-04 10:33:42] VERSION="7 (Core)"
[2025-06-04 10:33:42] ID="centos"
[2025-06-04 10:33:42] ID_LIKE="rhel fedora"
[2025-06-04 10:33:42] VERSION_ID="7"
[2025-06-04 10:33:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:33:42] ANSI_COLOR="0;31"
[2025-06-04 10:33:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:33:42] HOME_URL="https://www.centos.org/"
[2025-06-04 10:33:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:33:42] 
[2025-06-04 10:33:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:33:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:33:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:33:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:33:42] 
[2025-06-04 10:33:42] 2025-06-04 14:33:32,217 | INFO     | **************************************
[2025-06-04 10:33:42] 2025-06-04 14:33:32,719 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:33:42] 2025-06-04 14:33:32,736 | INFO     | sufficient remaining disk space (75575066624 B)
[2025-06-04 10:33:42] 2025-06-04 14:33:32,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:33:42] 2025-06-04 14:33:32,737 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:33:42] 2025-06-04 14:33:32,737 | INFO     | update_server=False
[2025-06-04 10:33:42] 2025-06-04 14:33:32,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:33:42] 2025-06-04 14:33:32,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:33:42] 2025-06-04 14:33:32,737 | INFO     | aborting loop
[2025-06-04 10:33:42] 2025-06-04 14:33:32,737 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:33:42] 2025-06-04 14:33:32,738 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:33:42] 2025-06-04 14:33:32,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:33:42] 2025-06-04 14:33:32,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:33:42] 2025-06-04 14:33:32,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:33:42] 2025-06-04 14:33:33,192 | INFO     | all data control threads have been joined
[2025-06-04 10:33:42] 2025-06-04 14:33:33,417 | INFO     | all payload control threads have been joined
[2025-06-04 10:33:42] 2025-06-04 14:33:33,484 | INFO     | all job control threads have been joined
[2025-06-04 10:33:42] 2025-06-04 14:33:33,742 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:33,743 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:33,853 | INFO     | [job] validate thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:33,906 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:33,922 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:34,090 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:34,103 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:34,171 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:34,198 | INFO     | [data] control thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:34,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:33:42] 2025-06-04 14:33:34,423 | INFO     | [payload] control thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:34,490 | INFO     | [job] control thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:34,600 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:34,960 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:35,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:33:42] 2025-06-04 14:33:36,246 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:36,477 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:36,778 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:33:42] 2025-06-04 14:33:37,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140642819696448)>', '<ExcThread(monitor, started 140642168588032)>']
[2025-06-04 10:33:42] 2025-06-04 14:33:37,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:33:42] 2025-06-04 14:33:37,766 | INFO     | [monitor] control thread has ended
[2025-06-04 10:33:42] 2025-06-04 14:33:42,476 | INFO     | all workflow threads have been joined
[2025-06-04 10:33:42] 2025-06-04 14:33:42,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:33:42] 2025-06-04 14:33:42,477 | INFO     | traces error code: 0
[2025-06-04 10:33:42] 2025-06-04 14:33:42,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:33:42] 2025-06-04 14:33:42,570 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:33:42] 2025-06-04 14:33:42,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:33:42] 2025-06-04 14:33:42,575 [wrapper] pilotpid: 484522
[2025-06-04 10:33:42] 2025-06-04 14:33:42,579 [wrapper] Pilot exit status: 0
[2025-06-04 10:33:42] 2025-06-04 14:33:42,600 [wrapper] pandaids: 6679438270
[2025-06-04 10:33:42] 2025-06-04 14:33:42,723 [wrapper] cleanup supervisor_pilot 1325977 484523
[2025-06-04 10:33:42] 2025-06-04 14:33:42,727 [wrapper] Test setup, not cleaning
[2025-06-04 10:33:42] 2025-06-04 14:33:42,730 [wrapper] apfmon messages muted
[2025-06-04 10:33:42] 2025-06-04 14:33:42,732 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:33:42] 2025-06-04 14:33:42,737 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:33:42]  *** Error codes and diagnostics ***
[2025-06-04 10:33:42]     "exeErrorCode": 0,
[2025-06-04 10:33:42]     "exeErrorDiag": "",
[2025-06-04 10:33:42]     "pilotErrorCode": 0,
[2025-06-04 10:33:42]     "pilotErrorDiag": "",
[2025-06-04 10:33:42]  *** Listing of results directory ***
[2025-06-04 10:33:42] total 397168
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 05:03 queuedata.json
[2025-06-04 10:33:42] -rwx------. 1 boincer umatlas     37140 Jun  4 05:03 runpilot2-wrapper.sh
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:33:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:15 run_atlas
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:15 job.xml
[2025-06-04 10:33:42] -rw-r--r--. 2 boincer umatlas 214058091 Jun  4 09:15 EVNT.45006593._001816.pool.root.1
[2025-06-04 10:33:42] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:15 shared
[2025-06-04 10:33:42] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 09:15 input.tar.gz
[2025-06-04 10:33:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:15 start_atlas.sh
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:15 boinc_lockfile
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 09:15 pandaJob.out
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas    986811 Jun  4 09:15 agis_schedconf.cvmfs.json
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:15 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:33:42] drwx------. 4 boincer umatlas      4096 Jun  4 09:15 pilot3
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas      6933 Jun  4 10:29 init_data.xml
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas 187314413 Jun  4 10:32 HITS.45006595._056305.pool.root.1
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:32 boinc_task_state.xml
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas        95 Jun  4 10:33 pilot_heartbeat.json
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas      1039 Jun  4 10:33 memory_monitor_summary.json
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas    301346 Jun  4 10:33 log.45006595._056305.job.log.tgz.1
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas      7696 Jun  4 10:33 heartbeat.json
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:33 boinc_mmap_file
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:33 wrapper_checkpoint.txt
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas      4476 Jun  4 10:33 pilotlog.txt
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas    445616 Jun  4 10:33 log.45006595._056305.job.log.1
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas       357 Jun  4 10:33 output.list
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:33 runtime_log
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas    768000 Jun  4 10:33 result.tar.gz
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas       654 Jun  4 10:33 swCNDm4Czg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmE1aKDmOzxC7m.diag
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 10:33 runtime_log.err
[2025-06-04 10:33:42] -rw-r--r--. 1 boincer umatlas     21670 Jun  4 10:33 stderr.txt
[2025-06-04 10:33:42] HITS file was successfully produced:
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas 187314413 Jun  4 10:32 shared/HITS.pool.root.1
[2025-06-04 10:33:42]  *** Contents of shared directory: ***
[2025-06-04 10:33:42] total 393244
[2025-06-04 10:33:42] -rw-r--r--. 2 boincer umatlas 214058091 Jun  4 09:15 ATLAS.root_0
[2025-06-04 10:33:42] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 09:15 input.tar.gz
[2025-06-04 10:33:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:15 start_atlas.sh
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas 187314413 Jun  4 10:32 HITS.pool.root.1
[2025-06-04 10:33:42] -rw-------. 1 boincer umatlas    768000 Jun  4 10:33 result.tar.gz
10:33:44 (480924): run_atlas exited; CPU time 29189.799304
10:33:44 (480924): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN