Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:23:41 (3127073): wrapper (7.7.26015): starting
09:23:41 (3127073): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 09:23:41] Arguments: --nthreads 4
[2025-06-04 09:23:41] Threads: 4
[2025-06-04 09:23:41] Checking for CVMFS
[2025-06-04 09:23:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:23:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:23:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:23:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:23:42] 2.12.7.0 2676814 2808 74652 146788 3 132 3618691 6144000 13845 130560 0 21519533 99.999 704319 4074 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 09:23:42] CVMFS is ok
[2025-06-04 09:23:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:23:42] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 09:23:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 09:23:42] Further information can be found at the LHC@home message board.
[2025-06-04 09:23:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:23:42] Checking for apptainer binary...
[2025-06-04 09:23:42] apptainer is not installed, using version from CVMFS
[2025-06-04 09:23:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:23:42] mz32
[2025-06-04 09:23:42] apptainer works
[2025-06-04 09:23:42] Set ATHENA_PROC_NUMBER=4
[2025-06-04 09:23:42] Set ATHENA_CORE_NUMBER=4
[2025-06-04 09:23:42] Starting ATLAS job with PandaID=6679438678
[2025-06-04 09:23:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:29:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:29:46] 2025-06-04 19:29:25,977 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:29:46] 2025-06-04 19:29:25,977 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:29:46] 2025-06-04 19:29:25,977 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:29:46] 2025-06-04 19:29:25,981 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:29:46] 2025-06-04 19:29:25,982 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 12:29:46] 2025-06-04 19:29:25,983 | INFO     | sum of deviations: -17423882315.000004
[2025-06-04 12:29:46] 2025-06-04 19:29:25,983 | INFO     | mean x: 1749059800.5
[2025-06-04 12:29:46] 2025-06-04 19:29:25,984 | INFO     | mean y: 2346633.054945055
[2025-06-04 12:29:46] 2025-06-04 19:29:25,984 | INFO     | -- intersect: 16305443569.81552
[2025-06-04 12:29:46] 2025-06-04 19:29:25,984 | INFO     | intersect: 16305443569.81552
[2025-06-04 12:29:46] 2025-06-04 19:29:25,984 | INFO     | chi2: 2.335839999017144
[2025-06-04 12:29:46] 2025-06-04 19:29:25,984 | INFO     | sum of square deviations: 1719429448.0
[2025-06-04 12:29:46] 2025-06-04 19:29:25,989 | INFO     | sum of deviations: -5517895360.999999
[2025-06-04 12:29:46] 2025-06-04 19:29:25,990 | INFO     | mean x: 1749059648.0
[2025-06-04 12:29:46] 2025-06-04 19:29:25,990 | INFO     | mean y: 2358487.378531073
[2025-06-04 12:29:46] 2025-06-04 19:29:25,990 | INFO     | -- intersect: 5615341403.913698
[2025-06-04 12:29:46] 2025-06-04 19:29:25,990 | INFO     | intersect: 5615341403.913698
[2025-06-04 12:29:46] 2025-06-04 19:29:25,990 | INFO     | chi2: 1.5356047829060857
[2025-06-04 12:29:46] 2025-06-04 19:29:25,990 | INFO     | current chi2=1.5356047829060857 (change=34.25899104595241 %)
[2025-06-04 12:29:46] 2025-06-04 19:29:25,991 | INFO     | sum of square deviations: 1577789583.0
[2025-06-04 12:29:46] 2025-06-04 19:29:25,992 | INFO     | sum of deviations: -5236972213.500001
[2025-06-04 12:29:46] 2025-06-04 19:29:25,992 | INFO     | mean x: 1749059495.5
[2025-06-04 12:29:46] 2025-06-04 19:29:25,992 | INFO     | mean y: 2358790.773255814
[2025-06-04 12:29:46] 2025-06-04 19:29:25,992 | INFO     | -- intersect: 5807807170.192446
[2025-06-04 12:29:46] 2025-06-04 19:29:25,993 | INFO     | intersect: 5807807170.192446
[2025-06-04 12:29:46] 2025-06-04 19:29:25,993 | INFO     | chi2: 1.535086136394317
[2025-06-04 12:29:46] 2025-06-04 19:29:25,993 | INFO     | current chi2=1.535086136394317 (change=0.03377473927811573 %)
[2025-06-04 12:29:46] 2025-06-04 19:29:25,993 | INFO     | right removable region: 171
[2025-06-04 12:29:46] 2025-06-04 19:29:25,994 | INFO     | sum of square deviations: 1719429448.0
[2025-06-04 12:29:46] 2025-06-04 19:29:25,995 | INFO     | sum of deviations: -41035838320.99999
[2025-06-04 12:29:46] 2025-06-04 19:29:25,995 | INFO     | mean x: 1749059953.0
[2025-06-04 12:29:46] 2025-06-04 19:29:25,995 | INFO     | mean y: 2370305.4576271186
[2025-06-04 12:29:46] 2025-06-04 19:29:25,995 | INFO     | -- intersect: 41745369140.640915
[2025-06-04 12:29:46] 2025-06-04 19:29:25,995 | INFO     | intersect: 41745369140.640915
[2025-06-04 12:29:46] 2025-06-04 19:29:25,996 | INFO     | chi2: 0.936654914751192
[2025-06-04 12:29:46] 2025-06-04 19:29:25,996 | INFO     | current chi2=0.936654914751192 (change=59.90072457251737 %)
[2025-06-04 12:29:46] 2025-06-04 19:29:25,996 | INFO     | sum of square deviations: 1577789583.0
[2025-06-04 12:29:46] 2025-06-04 19:29:25,997 | INFO     | sum of deviations: -38615122190.0
[2025-06-04 12:29:46] 2025-06-04 19:29:26,002 | INFO     | mean x: 1749060105.5
[2025-06-04 12:29:46] 2025-06-04 19:29:26,002 | INFO     | mean y: 2367671.5
[2025-06-04 12:29:46] 2025-06-04 19:29:26,002 | INFO     | -- intersect: 42809197187.45884
[2025-06-04 12:29:46] 2025-06-04 19:29:26,002 | INFO     | intersect: 42809197187.45884
[2025-06-04 12:29:46] 2025-06-04 19:29:26,002 | INFO     | chi2: 0.9335410463846348
[2025-06-04 12:29:46] 2025-06-04 19:29:26,002 | INFO     | current chi2=0.9335410463846348 (change=0.33244563366054614 %)
[2025-06-04 12:29:46] 2025-06-04 19:29:26,003 | INFO     | left removable region: 20
[2025-06-04 12:29:46] 2025-06-04 19:29:26,003 | INFO     | sum of square deviations: 1067554900.0
[2025-06-04 12:29:46] 2025-06-04 19:29:26,004 | INFO     | sum of deviations: -16720674193.0
[2025-06-04 12:29:46] 2025-06-04 19:29:26,004 | INFO     | mean x: 1749060075.0
[2025-06-04 12:29:46] 2025-06-04 19:29:26,004 | INFO     | mean y: 2369837.0
[2025-06-04 12:29:46] 2025-06-04 19:29:26,004 | INFO     | -- intersect: 27397179844.484528
[2025-06-04 12:29:46] 2025-06-04 19:29:26,004 | INFO     | intersect: 27397179844.484528
[2025-06-04 12:29:46] 2025-06-04 19:29:26,005 | INFO     | chi2: 0.08111558708454486
[2025-06-04 12:29:46] 2025-06-04 19:29:26,005 | INFO     | -- intersect: 27397179844.484528
[2025-06-04 12:29:46] 2025-06-04 19:29:26,005 | INFO     | current memory leak: -15.66 B/s (using 151 data points, chi2=0.08)
[2025-06-04 12:29:46] 2025-06-04 19:29:26,005 | INFO     | ..............................
[2025-06-04 12:29:46] 2025-06-04 19:29:26,005 | INFO     | . Timing measurements:
[2025-06-04 12:29:46] 2025-06-04 19:29:26,007 | INFO     | . get job = 0 s
[2025-06-04 12:29:46] 2025-06-04 19:29:26,007 | INFO     | . initial setup = 4 s
[2025-06-04 12:29:46] 2025-06-04 19:29:26,007 | INFO     | . payload setup = 11 s
[2025-06-04 12:29:46] 2025-06-04 19:29:26,007 | INFO     | . stage-in = 0 s
[2025-06-04 12:29:46] 2025-06-04 19:29:26,007 | INFO     | . payload execution = 11078 s
[2025-06-04 12:29:46] 2025-06-04 19:29:26,007 | INFO     | . stage-out = 3 s
[2025-06-04 12:29:46] 2025-06-04 19:29:26,007 | INFO     | . log creation = 0 s
[2025-06-04 12:29:46] 2025-06-04 19:29:26,007 | INFO     | ..............................
[2025-06-04 12:29:46] 2025-06-04 19:29:26,170 | INFO     | 
[2025-06-04 12:29:46] 2025-06-04 19:29:26,171 | INFO     | job summary report
[2025-06-04 12:29:46] 2025-06-04 19:29:26,171 | INFO     | --------------------------------------------------
[2025-06-04 12:29:46] 2025-06-04 19:29:26,171 | INFO     | PanDA job id: 6679438678
[2025-06-04 12:29:46] 2025-06-04 19:29:26,171 | INFO     | task id: 45006595
[2025-06-04 12:29:46] 2025-06-04 19:29:26,171 | INFO     | errors: (none)
[2025-06-04 12:29:46] 2025-06-04 19:29:26,171 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:29:46] 2025-06-04 19:29:26,171 | INFO     | pilot state: finished 
[2025-06-04 12:29:46] 2025-06-04 19:29:26,171 | INFO     | transexitcode: 0
[2025-06-04 12:29:46] 2025-06-04 19:29:26,171 | INFO     | exeerrorcode: 0
[2025-06-04 12:29:46] 2025-06-04 19:29:26,171 | INFO     | exeerrordiag: 
[2025-06-04 12:29:46] 2025-06-04 19:29:26,171 | INFO     | exitcode: 0
[2025-06-04 12:29:46] 2025-06-04 19:29:26,172 | INFO     | exitmsg: OK
[2025-06-04 12:29:46] 2025-06-04 19:29:26,172 | INFO     | cpuconsumptiontime: 42603 s
[2025-06-04 12:29:46] 2025-06-04 19:29:26,172 | INFO     | nevents: 400
[2025-06-04 12:29:46] 2025-06-04 19:29:26,172 | INFO     | neventsw: 0
[2025-06-04 12:29:46] 2025-06-04 19:29:26,172 | INFO     | pid: 3138648
[2025-06-04 12:29:46] 2025-06-04 19:29:26,172 | INFO     | pgrp: 3138648
[2025-06-04 12:29:46] 2025-06-04 19:29:26,172 | INFO     | corecount: 4
[2025-06-04 12:29:46] 2025-06-04 19:29:26,172 | INFO     | event service: False
[2025-06-04 12:29:46] 2025-06-04 19:29:26,172 | INFO     | sizes: {0: 2397128, 1: 2397327, 8: 2397533, 12: 2397561, 11094: 2426567, 11097: 2435706, 11106: 2435820}
[2025-06-04 12:29:46] 2025-06-04 19:29:26,172 | INFO     | --------------------------------------------------
[2025-06-04 12:29:46] 2025-06-04 19:29:26,172 | INFO     | 
[2025-06-04 12:29:46] 2025-06-04 19:29:26,173 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-06-04 12:29:46] 2025-06-04 19:29:26,201 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,201 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,202 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,202 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,202 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,202 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,202 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,203 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,203 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,203 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,203 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:29:46] 2025-06-04 19:29:26,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,204 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:29:46] 2025-06-04 19:29:26,204 | INFO     | job 6679438678 has completed (purged errors)
[2025-06-04 12:29:46] 2025-06-04 19:29:26,204 | INFO     | overall cleanup function is called
[2025-06-04 12:29:46] 2025-06-04 19:29:26,545 | INFO     | PID=3131219 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 12:29:46] 2025-06-04 19:29:26,545 | INFO     | .. there are 5 such processes running
[2025-06-04 12:29:46] 2025-06-04 19:29:27,216 | INFO     | --- collectZombieJob: --- 10, [3138648]
[2025-06-04 12:29:46] 2025-06-04 19:29:27,216 | INFO     | zombie collector waiting for pid 3138648
[2025-06-04 12:29:46] 2025-06-04 19:29:27,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:29:46] 2025-06-04 19:29:27,216 | INFO     | collected zombie processes
[2025-06-04 12:29:46] 2025-06-04 19:29:27,216 | INFO     | will attempt to kill all subprocesses of pid=3138648
[2025-06-04 12:29:46] 2025-06-04 19:29:27,727 | INFO     | process IDs to be killed: [3138648] (in reverse order)
[2025-06-04 12:29:46] 2025-06-04 19:29:27,949 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:29:46] 2025-06-04 19:29:27,949 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:29:46] 2025-06-04 19:29:27,964 | INFO     | did not find any defunct processes belonging to 3138648
[2025-06-04 12:29:46] 2025-06-04 19:29:27,977 | INFO     | did not find any defunct processes belonging to 3138648
[2025-06-04 12:29:46] 2025-06-04 19:29:27,978 | INFO     | ready for new job
[2025-06-04 12:29:46] 2025-06-04 19:29:27,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:29:46] 2025-06-04 19:29:27,980 | INFO     | **************************************
[2025-06-04 12:29:46] 2025-06-04 19:29:27,980 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:29:46] 2025-06-04 19:29:27,980 | INFO     | **************************************
[2025-06-04 12:29:46] 2025-06-04 19:29:27,980 | INFO     | 
[2025-06-04 12:29:46] 2025-06-04 19:29:27,991 | INFO     | architecture information:
[2025-06-04 12:29:46] 2025-06-04 19:29:27,991 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:29:46] 2025-06-04 19:29:28,036 | INFO     | cat /etc/os-release:
[2025-06-04 12:29:46] NAME="CentOS Linux"
[2025-06-04 12:29:46] VERSION="7 (Core)"
[2025-06-04 12:29:46] ID="centos"
[2025-06-04 12:29:46] ID_LIKE="rhel fedora"
[2025-06-04 12:29:46] VERSION_ID="7"
[2025-06-04 12:29:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:29:46] ANSI_COLOR="0;31"
[2025-06-04 12:29:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:29:46] HOME_URL="https://www.centos.org/"
[2025-06-04 12:29:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:29:46] 
[2025-06-04 12:29:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:29:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:29:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:29:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:29:46] 
[2025-06-04 12:29:46] 2025-06-04 19:29:28,037 | INFO     | **************************************
[2025-06-04 12:29:46] 2025-06-04 19:29:28,539 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-06-04 12:29:46] 2025-06-04 19:29:28,565 | INFO     | sufficient remaining disk space (269359251456 B)
[2025-06-04 12:29:46] 2025-06-04 19:29:28,566 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:29:46] 2025-06-04 19:29:28,566 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:29:46] 2025-06-04 19:29:28,566 | INFO     | update_server=False
[2025-06-04 12:29:46] 2025-06-04 19:29:28,566 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:29:46] 2025-06-04 19:29:28,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:29:46] 2025-06-04 19:29:28,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:29:46] 2025-06-04 19:29:28,567 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:29:46] 2025-06-04 19:29:28,568 | INFO     | aborting loop
[2025-06-04 12:29:46] 2025-06-04 19:29:28,568 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:29:46] 2025-06-04 19:29:28,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:29:46] 2025-06-04 19:29:28,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:29:46] 2025-06-04 19:29:29,533 | INFO     | all data control threads have been joined
[2025-06-04 12:29:46] 2025-06-04 19:29:29,571 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:29,574 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:29,978 | INFO     | all job control threads have been joined
[2025-06-04 12:29:46] 2025-06-04 19:29:29,989 | INFO     | [job] validate thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:30,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:29:46] 2025-06-04 19:29:30,046 | INFO     | all payload control threads have been joined
[2025-06-04 12:29:46] 2025-06-04 19:29:30,103 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:30,265 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:30,344 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:30,503 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:30,538 | INFO     | [data] control thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:30,875 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:30,983 | INFO     | [job] control thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:31,051 | INFO     | [payload] control thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:31,131 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:31,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:29:46] 2025-06-04 19:29:32,015 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:32,187 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:32,574 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:38,661 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:29:46] 2025-06-04 19:29:39,666 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:29:46] 2025-06-04 19:29:40,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128927594006336)>', '<ExcThread(monitor, started 128926898697984)>']
[2025-06-04 12:29:46] 2025-06-04 19:29:41,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:29:46] 2025-06-04 19:29:41,636 | INFO     | [monitor] control thread has ended
[2025-06-04 12:29:46] 2025-06-04 19:29:45,732 | INFO     | all workflow threads have been joined
[2025-06-04 12:29:46] 2025-06-04 19:29:45,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:29:46] 2025-06-04 19:29:45,732 | INFO     | traces error code: 0
[2025-06-04 12:29:46] 2025-06-04 19:29:45,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:29:46] 2025-06-04 19:29:45,878 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:29:46] 2025-06-04 19:29:45,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:29:46] 2025-06-04 19:29:45,885 [wrapper] pilotpid: 3131219
[2025-06-04 12:29:46] 2025-06-04 19:29:45,891 [wrapper] Pilot exit status: 0
[2025-06-04 12:29:46] 2025-06-04 19:29:45,905 [wrapper] pandaids: 6679438678
[2025-06-04 12:29:46] 2025-06-04 19:29:46,015 [wrapper] cleanup supervisor_pilot 3441866 3131220
[2025-06-04 12:29:46] 2025-06-04 19:29:46,020 [wrapper] Test setup, not cleaning
[2025-06-04 12:29:46] 2025-06-04 19:29:46,023 [wrapper] apfmon messages muted
[2025-06-04 12:29:46] 2025-06-04 19:29:46,030 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:29:46] 2025-06-04 19:29:46,034 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:29:46]  *** Error codes and diagnostics ***
[2025-06-04 12:29:46]     "exeErrorCode": 0,
[2025-06-04 12:29:46]     "exeErrorDiag": "",
[2025-06-04 12:29:46]     "pilotErrorCode": 0,
[2025-06-04 12:29:46]     "pilotErrorDiag": "",
[2025-06-04 12:29:46]  *** Listing of results directory ***
[2025-06-04 12:29:46] total 391120
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:46 pilot3.tar.gz
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:03 queuedata.json
[2025-06-04 12:29:46] -rwx------ 1 boinc boinc     37140 Jun  4 02:03 runpilot2-wrapper.sh
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc       100 Jun  4 09:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:29:46] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:23 run_atlas
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc       105 Jun  4 09:23 job.xml
[2025-06-04 12:29:46] -rw-r--r-- 2 boinc boinc 218620839 Jun  4 09:23 EVNT.45006593._001911.pool.root.1
[2025-06-04 12:29:46] drwxrwx--x 2 boinc boinc      4096 Jun  4 09:23 shared
[2025-06-04 12:29:46] -rw-r--r-- 2 boinc boinc    508886 Jun  4 09:23 input.tar.gz
[2025-06-04 12:29:46] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:23 start_atlas.sh
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc     10262 Jun  4 09:23 init_data.xml
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:23 boinc_setup_complete
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:23 boinc_lockfile
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc      2525 Jun  4 09:23 pandaJob.out
[2025-06-04 12:29:46] -rw------- 1 boinc boinc    990984 Jun  4 09:23 agis_schedconf.cvmfs.json
[2025-06-04 12:29:46] drwx------ 4 boinc boinc      4096 Jun  4 09:24 pilot3
[2025-06-04 12:29:46] -rw------- 1 boinc boinc 175374517 Jun  4 12:28 HITS.45006595._056309.pool.root.1
[2025-06-04 12:29:46] -rw------- 1 boinc boinc        95 Jun  4 12:28 pilot_heartbeat.json
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc       530 Jun  4 12:28 boinc_task_state.xml
[2025-06-04 12:29:46] -rw------- 1 boinc boinc      1038 Jun  4 12:29 memory_monitor_summary.json
[2025-06-04 12:29:46] -rw------- 1 boinc boinc   1598969 Jun  4 12:29 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:29:46] -rw------- 1 boinc boinc    313804 Jun  4 12:29 log.45006595._056309.job.log.tgz.1
[2025-06-04 12:29:46] -rw------- 1 boinc boinc      7655 Jun  4 12:29 heartbeat.json
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc        28 Jun  4 12:29 wrapper_checkpoint.txt
[2025-06-04 12:29:46] -rw------- 1 boinc boinc      4556 Jun  4 12:29 pilotlog.txt
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:29 boinc_mmap_file
[2025-06-04 12:29:46] -rw------- 1 boinc boinc   1022582 Jun  4 12:29 log.45006595._056309.job.log.1
[2025-06-04 12:29:46] -rw------- 1 boinc boinc       357 Jun  4 12:29 output.list
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:29 runtime_log
[2025-06-04 12:29:46] -rw------- 1 boinc boinc   1351680 Jun  4 12:29 result.tar.gz
[2025-06-04 12:29:46] -rw------- 1 boinc boinc       656 Jun  4 12:29 zkJNDm4Czg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmI1aKDm6Qn5xn.diag
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc      8742 Jun  4 12:29 runtime_log.err
[2025-06-04 12:29:46] -rw-r--r-- 1 boinc boinc     20975 Jun  4 12:29 stderr.txt
[2025-06-04 12:29:46] HITS file was successfully produced:
[2025-06-04 12:29:46] -rw------- 1 boinc boinc 175374517 Jun  4 12:28 shared/HITS.pool.root.1
[2025-06-04 12:29:46]  *** Contents of shared directory: ***
[2025-06-04 12:29:46] total 386612
[2025-06-04 12:29:46] -rw-r--r-- 2 boinc boinc 218620839 Jun  4 09:23 ATLAS.root_0
[2025-06-04 12:29:46] -rw-r--r-- 2 boinc boinc    508886 Jun  4 09:23 input.tar.gz
[2025-06-04 12:29:46] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:23 start_atlas.sh
[2025-06-04 12:29:46] -rw------- 1 boinc boinc 175374517 Jun  4 12:28 HITS.pool.root.1
[2025-06-04 12:29:46] -rw------- 1 boinc boinc   1351680 Jun  4 12:29 result.tar.gz
12:29:47 (3127073): run_atlas exited; CPU time 43204.514537
12:29:47 (3127073): called boinc_finish(0)

</stderr_txt>
]]>

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