Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:34:36 (5395): wrapper (7.7.26015): starting
23:34:36 (5395): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 23:34:36] Arguments: --nthreads 8
[2025-06-04 23:34:36] Threads: 8
[2025-06-04 23:34:36] Checking for CVMFS
[2025-06-04 23:34:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:34:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:34:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:34:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:34:38] 2.11.2.0 4192 33936 93184 146795 1 254 15902582 25165824 4248 130560 0 17150271 99.829 18021445 2007 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 23:34:38] CVMFS is ok
[2025-06-04 23:34:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:34:38] Checking for apptainer binary...
[2025-06-04 23:34:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:34:38] Running /usr/bin/apptainer --version
[2025-06-04 23:34:38] apptainer version 1.3.2-1.el7
[2025-06-04 23:34:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:34:43] cg-vwn295.simple-grid.lan
[2025-06-04 23:34:43] apptainer works
[2025-06-04 23:34:43] Set ATHENA_PROC_NUMBER=8
[2025-06-04 23:34:43] Set ATHENA_CORE_NUMBER=8
[2025-06-04 23:34:43] Starting ATLAS job with PandaID=6679418187
[2025-06-04 23:34:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:44:21]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:44:21] 2025-06-05 01:39:58,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:44:21] 2025-06-05 01:40:01,005 | INFO     | monitor loop #1073: job 0:6679418187 is in state 'finished'
[2025-06-05 03:44:21] 2025-06-05 01:40:01,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:44:21] 2025-06-05 01:40:01,896 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 03:44:21] 2025-06-05 01:40:01,897 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6679418187/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:44:21] 2025-06-05 01:40:01,898 | INFO     | extracted standard info from prmon json
[2025-06-05 03:44:21] 2025-06-05 01:40:01,898 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:44:21] 2025-06-05 01:40:01,898 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:44:21] 2025-06-05 01:40:01,898 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:44:21] 2025-06-05 01:40:01,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:44:21] 2025-06-05 01:40:01,903 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:44:21] 2025-06-05 01:40:01,904 | INFO     | sum of square deviations: 3723716330.0
[2025-06-05 03:44:21] 2025-06-05 01:40:01,906 | INFO     | sum of deviations: 38551294657.0
[2025-06-05 03:44:21] 2025-06-05 01:40:01,906 | INFO     | mean x: 1749080499.0
[2025-06-05 03:44:21] 2025-06-05 01:40:01,906 | INFO     | mean y: 2459364.03930131
[2025-06-05 03:44:21] 2025-06-05 01:40:01,906 | INFO     | -- intersect: -18105611101.081654
[2025-06-05 03:44:21] 2025-06-05 01:40:01,906 | INFO     | intersect: -18105611101.081654
[2025-06-05 03:44:21] 2025-06-05 01:40:01,907 | INFO     | chi2: 4.611037326550871
[2025-06-05 03:44:21] 2025-06-05 01:40:01,907 | INFO     | sum of square deviations: 3485088600.0
[2025-06-05 03:44:21] 2025-06-05 01:40:01,909 | INFO     | sum of deviations: 52602275424.0
[2025-06-05 03:44:21] 2025-06-05 01:40:01,909 | INFO     | mean x: 1749080346.5
[2025-06-05 03:44:21] 2025-06-05 01:40:01,909 | INFO     | mean y: 2468172.4196428573
[2025-06-05 03:44:21] 2025-06-05 01:40:01,910 | INFO     | -- intersect: -26397321527.417072
[2025-06-05 03:44:21] 2025-06-05 01:40:01,910 | INFO     | intersect: -26397321527.417072
[2025-06-05 03:44:21] 2025-06-05 01:40:01,910 | INFO     | chi2: 3.8747445973501087
[2025-06-05 03:44:21] 2025-06-05 01:40:01,910 | INFO     | current chi2=3.8747445973501087 (change=15.968049639527019 %)
[2025-06-05 03:44:21] 2025-06-05 01:40:01,910 | INFO     | right removable region: 223
[2025-06-05 03:44:21] 2025-06-05 01:40:01,911 | INFO     | sum of square deviations: 3485088600.0
[2025-06-05 03:44:21] 2025-06-05 01:40:01,913 | INFO     | sum of deviations: -28353213854.5
[2025-06-05 03:44:21] 2025-06-05 01:40:01,913 | INFO     | mean x: 1749080651.5
[2025-06-05 03:44:21] 2025-06-05 01:40:01,913 | INFO     | mean y: 2501952.941964286
[2025-06-05 03:44:21] 2025-06-05 01:40:01,913 | INFO     | -- intersect: 14232285884.618103
[2025-06-05 03:44:21] 2025-06-05 01:40:01,913 | INFO     | intersect: 14232285884.618103
[2025-06-05 03:44:21] 2025-06-05 01:40:01,914 | INFO     | chi2: 0.9771518374940691
[2025-06-05 03:44:21] 2025-06-05 01:40:01,914 | INFO     | current chi2=0.9771518374940691 (change=78.80841623494308 %)
[2025-06-05 03:44:21] 2025-06-05 01:40:01,914 | INFO     | sum of square deviations: 3256879670.0
[2025-06-05 03:44:21] 2025-06-05 01:40:01,923 | INFO     | sum of deviations: -34893198040.0
[2025-06-05 03:44:21] 2025-06-05 01:40:01,924 | INFO     | mean x: 1749080804.0
[2025-06-05 03:44:21] 2025-06-05 01:40:01,924 | INFO     | mean y: 2506286.9315068494
[2025-06-05 03:44:21] 2025-06-05 01:40:01,924 | INFO     | -- intersect: 18741615208.91831
[2025-06-05 03:44:21] 2025-06-05 01:40:01,924 | INFO     | intersect: 18741615208.91831
[2025-06-05 03:44:21] 2025-06-05 01:40:01,925 | INFO     | chi2: 0.9170846866557721
[2025-06-05 03:44:21] 2025-06-05 01:40:01,925 | INFO     | current chi2=0.9170846866557721 (change=6.147166543977514 %)
[2025-06-05 03:44:21] 2025-06-05 01:40:01,925 | INFO     | left removable region: 20
[2025-06-05 03:44:21] 2025-06-05 01:40:01,925 | INFO     | sum of square deviations: 2593916542.0
[2025-06-05 03:44:21] 2025-06-05 01:40:01,927 | INFO     | sum of deviations: -5878389196.000003
[2025-06-05 03:44:21] 2025-06-05 01:40:01,927 | INFO     | mean x: 1749080926.0
[2025-06-05 03:44:21] 2025-06-05 01:40:01,927 | INFO     | mean y: 2506060.049261084
[2025-06-05 03:44:21] 2025-06-05 01:40:01,928 | INFO     | -- intersect: 3966310697.4954877
[2025-06-05 03:44:21] 2025-06-05 01:40:01,928 | INFO     | intersect: 3966310697.4954877
[2025-06-05 03:44:21] 2025-06-05 01:40:01,928 | INFO     | chi2: 0.07289836681699355
[2025-06-05 03:44:21] 2025-06-05 01:40:01,928 | INFO     | -- intersect: 3966310697.4954877
[2025-06-05 03:44:21] 2025-06-05 01:40:01,929 | INFO     | current memory leak: -2.27 B/s (using 203 data points, chi2=0.07)
[2025-06-05 03:44:21] 2025-06-05 01:40:01,929 | INFO     | ..............................
[2025-06-05 03:44:21] 2025-06-05 01:40:01,930 | INFO     | . Timing measurements:
[2025-06-05 03:44:21] 2025-06-05 01:40:01,930 | INFO     | . get job = 0 s
[2025-06-05 03:44:21] 2025-06-05 01:40:01,930 | INFO     | . initial setup = 8 s
[2025-06-05 03:44:21] 2025-06-05 01:40:01,930 | INFO     | . payload setup = 152 s
[2025-06-05 03:44:21] 2025-06-05 01:40:01,930 | INFO     | . stage-in = 0 s
[2025-06-05 03:44:21] 2025-06-05 01:40:01,930 | INFO     | . payload execution = 14099 s
[2025-06-05 03:44:21] 2025-06-05 01:40:01,930 | INFO     | . stage-out = 3 s
[2025-06-05 03:44:21] 2025-06-05 01:40:01,930 | INFO     | . log creation = 1 s
[2025-06-05 03:44:21] 2025-06-05 01:40:01,930 | INFO     | ..............................
[2025-06-05 03:44:21] 2025-06-05 01:40:02,120 | INFO     | 
[2025-06-05 03:44:21] 2025-06-05 01:40:02,120 | INFO     | job summary report
[2025-06-05 03:44:21] 2025-06-05 01:40:02,121 | INFO     | --------------------------------------------------
[2025-06-05 03:44:21] 2025-06-05 01:40:02,121 | INFO     | PanDA job id: 6679418187
[2025-06-05 03:44:21] 2025-06-05 01:40:02,121 | INFO     | task id: 45006595
[2025-06-05 03:44:21] 2025-06-05 01:40:02,121 | INFO     | errors: (none)
[2025-06-05 03:44:21] 2025-06-05 01:40:02,121 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:44:21] 2025-06-05 01:40:02,121 | INFO     | pilot state: finished 
[2025-06-05 03:44:21] 2025-06-05 01:40:02,121 | INFO     | transexitcode: 0
[2025-06-05 03:44:21] 2025-06-05 01:40:02,121 | INFO     | exeerrorcode: 0
[2025-06-05 03:44:21] 2025-06-05 01:40:02,121 | INFO     | exeerrordiag: 
[2025-06-05 03:44:21] 2025-06-05 01:40:02,121 | INFO     | exitcode: 0
[2025-06-05 03:44:21] 2025-06-05 01:40:02,122 | INFO     | exitmsg: OK
[2025-06-05 03:44:21] 2025-06-05 01:40:02,122 | INFO     | cpuconsumptiontime: 50913 s
[2025-06-05 03:44:21] 2025-06-05 01:40:02,122 | INFO     | nevents: 400
[2025-06-05 03:44:21] 2025-06-05 01:40:02,122 | INFO     | neventsw: 0
[2025-06-05 03:44:21] 2025-06-05 01:40:02,122 | INFO     | pid: 19128
[2025-06-05 03:44:21] 2025-06-05 01:40:02,122 | INFO     | pgrp: 19128
[2025-06-05 03:44:21] 2025-06-05 01:40:02,122 | INFO     | corecount: 8
[2025-06-05 03:44:21] 2025-06-05 01:40:02,122 | INFO     | event service: False
[2025-06-05 03:44:21] 2025-06-05 01:40:02,122 | INFO     | sizes: {0: 2396458, 1: 2397315, 2: 2397343, 12: 2397343, 23: 2397371, 34: 2397399, 45: 2397555, 55: 2397583, 66: 2397611, 77: 2397639, 88: 2397695, 93: 2398209, 99
[2025-06-05 03:44:21] 2025-06-05 01:40:02,122 | INFO     | --------------------------------------------------
[2025-06-05 03:44:21] 2025-06-05 01:40:02,123 | INFO     | 
[2025-06-05 03:44:21] 2025-06-05 01:40:02,123 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-05 03:44:21] 2025-06-05 01:40:02,726 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,727 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,727 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,727 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,728 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,728 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:44:21] 2025-06-05 01:40:02,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,729 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:44:21] 2025-06-05 01:40:02,729 | INFO     | job 6679418187 has completed (purged errors)
[2025-06-05 03:44:21] 2025-06-05 01:40:02,729 | INFO     | overall cleanup function is called
[2025-06-05 03:44:21] 2025-06-05 01:40:03,738 | INFO     | --- collectZombieJob: --- 10, [19128]
[2025-06-05 03:44:21] 2025-06-05 01:40:03,738 | INFO     | zombie collector waiting for pid 19128
[2025-06-05 03:44:21] 2025-06-05 01:40:03,739 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:44:21] 2025-06-05 01:40:03,739 | INFO     | collected zombie processes
[2025-06-05 03:44:21] 2025-06-05 01:40:03,739 | INFO     | will attempt to kill all subprocesses of pid=19128
[2025-06-05 03:44:21] 2025-06-05 01:40:03,880 | INFO     | process IDs to be killed: [19128] (in reverse order)
[2025-06-05 03:44:21] 2025-06-05 01:40:04,876 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:44:21] 2025-06-05 01:40:04,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:44:21] 2025-06-05 01:40:04,880 | INFO     | did not find any defunct processes belonging to 19128
[2025-06-05 03:44:21] 2025-06-05 01:40:04,883 | INFO     | did not find any defunct processes belonging to 19128
[2025-06-05 03:44:21] 2025-06-05 01:40:04,883 | INFO     | ready for new job
[2025-06-05 03:44:21] 2025-06-05 01:40:04,884 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:44:21] 2025-06-05 01:40:04,886 | INFO     | **************************************
[2025-06-05 03:44:21] 2025-06-05 01:40:04,886 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:44:21] 2025-06-05 01:40:04,886 | INFO     | **************************************
[2025-06-05 03:44:21] 2025-06-05 01:40:04,886 | INFO     | 
[2025-06-05 03:44:21] 2025-06-05 01:40:04,887 | INFO     | pilot is running in a VM
[2025-06-05 03:44:21] 2025-06-05 01:40:04,887 | INFO     | architecture information:
[2025-06-05 03:44:21] 2025-06-05 01:40:04,888 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:44:21] 2025-06-05 01:40:05,186 | INFO     | cat /etc/os-release:
[2025-06-05 03:44:21] NAME="CentOS Linux"
[2025-06-05 03:44:21] VERSION="7 (Core)"
[2025-06-05 03:44:21] ID="centos"
[2025-06-05 03:44:21] ID_LIKE="rhel fedora"
[2025-06-05 03:44:21] VERSION_ID="7"
[2025-06-05 03:44:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:44:21] ANSI_COLOR="0;31"
[2025-06-05 03:44:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:44:21] HOME_URL="https://www.centos.org/"
[2025-06-05 03:44:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:44:21] 
[2025-06-05 03:44:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:44:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:44:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:44:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:44:21] 
[2025-06-05 03:44:21] 2025-06-05 01:40:05,186 | INFO     | **************************************
[2025-06-05 03:44:21] 2025-06-05 01:40:05,688 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-05 03:44:21] 2025-06-05 01:40:05,939 | INFO     | sufficient remaining disk space (496829988864 B)
[2025-06-05 03:44:21] 2025-06-05 01:40:05,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:44:21] 2025-06-05 01:40:05,940 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:44:21] 2025-06-05 01:40:05,940 | INFO     | update_server=False
[2025-06-05 03:44:21] 2025-06-05 01:40:05,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:44:21] 2025-06-05 01:40:05,940 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:44:21] 2025-06-05 01:40:05,941 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:44:21] 2025-06-05 01:40:05,942 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:44:21] 2025-06-05 01:40:05,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:44:21] 2025-06-05 01:40:05,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:44:21] 2025-06-05 01:40:05,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:44:21] 2025-06-05 01:40:06,031 | INFO     | all data control threads have been joined
[2025-06-05 03:44:21] 2025-06-05 01:40:06,037 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 03:44:21] 2025-06-05 01:40:06,037 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 03:44:21] 2025-06-05 01:40:06,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:44:21] 2025-06-05 01:40:06,038 | INFO     | will abort loop
[2025-06-05 03:44:21] 2025-06-05 01:40:06,664 | INFO     | all job control threads have been joined
[2025-06-05 03:44:21] 2025-06-05 01:40:06,946 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:06,964 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:06,995 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:07,037 | INFO     | [data] control thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:07,043 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:07,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:44:21] 2025-06-05 01:40:07,138 | INFO     | all payload control threads have been joined
[2025-06-05 03:44:21] 2025-06-05 01:40:07,532 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:07,670 | INFO     | [job] control thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:07,901 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:07,908 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:07,953 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:08,140 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:08,144 | INFO     | [payload] control thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:08,209 | INFO     | [job] validate thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:08,384 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:09,949 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:16,397 | INFO     | job.realtimelogging is not enabled
[2025-06-05 03:44:21] 2025-06-05 01:40:17,403 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:44:21] 2025-06-05 01:40:18,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685831362368)>', '<ExcThread(monitor, started 139685372335872)>']
[2025-06-05 03:44:21] 2025-06-05 01:40:19,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:44:21] 2025-06-05 01:40:19,022 | INFO     | [monitor] control thread has ended
[2025-06-05 03:44:21] 2025-06-05 01:40:23,070 | INFO     | all workflow threads have been joined
[2025-06-05 03:44:21] 2025-06-05 01:40:23,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:44:21] 2025-06-05 01:40:23,071 | INFO     | traces error code: 0
[2025-06-05 03:44:21] 2025-06-05 01:40:23,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:44:21] 2025-06-05 01:40:23,355 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:44:21] 2025-06-05 01:40:23,389 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:44:21] 2025-06-05 01:40:23,485 [wrapper] pilotpid: 10524
[2025-06-05 03:44:21] 2025-06-05 01:40:23,602 [wrapper] Pilot exit status: 0
[2025-06-05 03:44:21] 2025-06-05 01:40:24,076 [wrapper] pandaids: 6679418187
[2025-06-05 03:44:21] 2025-06-05 01:40:24,417 [wrapper] cleanup supervisor_pilot 26809 10525
[2025-06-05 03:44:21] 2025-06-05 01:40:24,479 [wrapper] Test setup, not cleaning
[2025-06-05 03:44:21] 2025-06-05 01:40:24,538 [wrapper] apfmon messages muted
[2025-06-05 03:44:21] 2025-06-05 01:40:24,591 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:44:21] 2025-06-05 01:40:24,684 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:44:21]  *** Error codes and diagnostics ***
[2025-06-05 03:44:21]     "exeErrorCode": 0,
[2025-06-05 03:44:21]     "exeErrorDiag": "",
[2025-06-05 03:44:21]     "pilotErrorCode": 0,
[2025-06-05 03:44:21]     "pilotErrorDiag": "",
[2025-06-05 03:44:21]  *** Listing of results directory ***
[2025-06-05 03:44:21] total 396124
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc      5111 Jun  4 11:03 queuedata.json
[2025-06-05 03:44:21] -rwx------. 1 boinc boinc     37140 Jun  4 11:03 runpilot2-wrapper.sh
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc       100 Jun  4 23:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:44:21] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 23:34 run_atlas
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc       105 Jun  4 23:34 job.xml
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc      6392 Jun  4 23:34 init_data.xml
[2025-06-05 03:44:21] -rw-r--r--. 2 boinc boinc 215432415 Jun  4 23:34 EVNT.45006593._000110.pool.root.1
[2025-06-05 03:44:21] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:34 start_atlas.sh
[2025-06-05 03:44:21] drwxrwx--x. 2 boinc boinc        68 Jun  4 23:34 shared
[2025-06-05 03:44:21] -rw-r--r--. 2 boinc boinc    508882 Jun  4 23:34 input.tar.gz
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc         0 Jun  4 23:34 boinc_lockfile
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc      2522 Jun  4 23:34 pandaJob.out
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc    987032 Jun  4 23:37 agis_schedconf.cvmfs.json
[2025-06-05 03:44:21] drwx------. 4 boinc boinc      4096 Jun  4 23:37 pilot3
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc 183101177 Jun  5 03:37 HITS.45006595._056268.pool.root.1
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc       531 Jun  5 03:37 boinc_task_state.xml
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc      1017 Jun  5 03:38 memory_monitor_summary.json
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc   1598969 Jun  5 03:38 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc    397494 Jun  5 03:38 log.45006595._056268.job.log.tgz.1
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc        95 Jun  5 03:39 pilot_heartbeat.json
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc      7684 Jun  5 03:40 heartbeat.json
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc      4798 Jun  5 03:40 pilotlog.txt
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc   1243348 Jun  5 03:40 log.45006595._056268.job.log.1
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc       357 Jun  5 03:40 output.list
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc       620 Jun  5 03:40 runtime_log
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc   1658880 Jun  5 03:40 result.tar.gz
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc      8673 Jun  5 03:40 runtime_log.err
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc       656 Jun  5 03:40 nbfMDm4Czg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmr0aKDmMwFMrn.diag
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc      8192 Jun  5 03:44 boinc_mmap_file
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc        28 Jun  5 03:44 wrapper_checkpoint.txt
[2025-06-05 03:44:21] -rw-r--r--. 1 boinc boinc     20743 Jun  5 03:44 stderr.txt
[2025-06-05 03:44:21] HITS file was successfully produced:
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc 183101177 Jun  5 03:37 shared/HITS.pool.root.1
[2025-06-05 03:44:21]  *** Contents of shared directory: ***
[2025-06-05 03:44:21] total 391332
[2025-06-05 03:44:21] -rw-r--r--. 2 boinc boinc 215432415 Jun  4 23:34 ATLAS.root_0
[2025-06-05 03:44:21] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:34 start_atlas.sh
[2025-06-05 03:44:21] -rw-r--r--. 2 boinc boinc    508882 Jun  4 23:34 input.tar.gz
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc 183101177 Jun  5 03:37 HITS.pool.root.1
[2025-06-05 03:44:21] -rw-------. 1 boinc boinc   1658880 Jun  5 03:40 result.tar.gz
03:44:23 (5395): run_atlas exited; CPU time 51109.788482
03:44:23 (5395): called boinc_finish(0)

</stderr_txt>
]]>

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