Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:09:44 (89889): wrapper (7.7.26015): starting
09:09:44 (89889): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:09:44] Arguments: --nthreads 8
[2025-06-04 09:09:44] Threads: 8
[2025-06-04 09:09:44] Checking for CVMFS
[2025-06-04 09:09:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:09:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:09:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:09:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:09:44] 2.12.6.0 3451353 23285 459708 146780 0 197 20855123 32935937 11116 16776704 0 134906567 99.720 101388595 26197 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:09:44] CVMFS is ok
[2025-06-04 09:09:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:09:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:09:44] Further information can be found at the LHC@home message board.
[2025-06-04 09:09:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:09:44] Checking for apptainer binary...
[2025-06-04 09:09:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:09:44] Running /usr/bin/apptainer --version
[2025-06-04 09:09:44] apptainer version 1.4.1-1.el9
[2025-06-04 09:09:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:09:44] c6-12-27-2.aglt2.org
[2025-06-04 09:09:44] apptainer works
[2025-06-04 09:09:44] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:09:44] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:09:44] Starting ATLAS job with PandaID=6679293640
[2025-06-04 09:09:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:10:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:10:01]  direct_access_wan=False
[2025-06-04 10:10:01]  domain=
[2025-06-04 10:10:01]  filesize=287290
[2025-06-04 10:10:01]  filetype=log
[2025-06-04 10:10:01]  guid=19494ec2-a0e7-448b-8cde-07501ea5e6d6
[2025-06-04 10:10:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:10:01]  is_altstaged=None
[2025-06-04 10:10:01]  is_tar=False
[2025-06-04 10:10:01]  lfn=log.45006595._056108.job.log.tgz.1
[2025-06-04 10:10:01]  mtime=0
[2025-06-04 10:10:01]  protocol_id=None
[2025-06-04 10:10:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:10:01]  replicas=None
[2025-06-04 10:10:01]  scope=mc23_13p6TeV
[2025-06-04 10:10:01]  status=None
[2025-06-04 10:10:01]  status_code=0
[2025-06-04 10:10:01]  storage_token=
[2025-06-04 10:10:01]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6679293640/log.45006595._056108.job.log.tgz.1
[2025-06-04 10:10:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/d1/log.45006595._056108.job.log.tgz.1
[2025-06-04 10:10:01]  workdir=None
[2025-06-04 10:10:01] ]
[2025-06-04 10:10:01] 2025-06-04 14:09:44,243 | INFO     | transferring file log.45006595._056108.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6679293640/log.45006595._056108.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:10:01] 2025-06-04 14:09:44,244 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6679293640/log.45006595._056108.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._056108.job
[2025-06-04 10:10:01] 2025-06-04 14:09:44,262 | INFO     | adding to output.list: log.45006595._056108.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/d1/log.45006595._056108.job.log.tg
[2025-06-04 10:10:01] 2025-06-04 14:09:44,263 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:10:01] 2025-06-04 14:09:44,263 | INFO     | summary of transferred files:
[2025-06-04 10:10:01] 2025-06-04 14:09:44,263 | INFO     |  -- lfn=log.45006595._056108.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:10:01] 2025-06-04 14:09:44,264 | INFO     | stage-out finished correctly
[2025-06-04 10:10:01] 2025-06-04 14:09:44,730 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:10:01] 2025-06-04 14:09:45,155 | INFO     | job 6679293640 has state=finished
[2025-06-04 10:10:01] 2025-06-04 14:09:45,155 | INFO     | preparing for final server update for job 6679293640 in state='finished'
[2025-06-04 10:10:01] 2025-06-04 14:09:45,156 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:10:01] 2025-06-04 14:09:45,156 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:10:01] 2025-06-04 14:09:45,156 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:10:01] 2025-06-04 14:09:45,157 | INFO     | job 6679293640 has finished - writing final server update
[2025-06-04 10:10:01] 2025-06-04 14:09:45,157 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:10:01] 2025-06-04 14:09:45,175 | INFO     | executing command: lscpu
[2025-06-04 10:10:01] 2025-06-04 14:09:45,253 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:10:01] 2025-06-04 14:09:45,916 | INFO     | monitor loop #267: job 0:6679293640 is in state 'finished'
[2025-06-04 10:10:01] 2025-06-04 14:09:45,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:10:01] 2025-06-04 14:09:47,944 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:10:01] 2025-06-04 14:09:47,945 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679293640/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:10:01] 2025-06-04 14:09:47,945 | INFO     | extracted standard info from prmon json
[2025-06-04 10:10:01] 2025-06-04 14:09:47,945 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:10:01] 2025-06-04 14:09:47,946 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:10:01] 2025-06-04 14:09:47,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:10:01] 2025-06-04 14:09:47,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:10:01] 2025-06-04 14:09:47,947 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:10:01] 2025-06-04 14:09:47,947 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 10:10:01] 2025-06-04 14:09:47,947 | INFO     | sum of deviations: 7122613485.5
[2025-06-04 10:10:01] 2025-06-04 14:09:47,947 | INFO     | mean x: 1749044478.5
[2025-06-04 10:10:01] 2025-06-04 14:09:47,947 | INFO     | mean y: 2133194.096153846
[2025-06-04 10:10:01] 2025-06-04 14:09:47,947 | INFO     | -- intersect: -285830900109.2258
[2025-06-04 10:10:01] 2025-06-04 14:09:47,947 | INFO     | intersect: -285830900109.2258
[2025-06-04 10:10:01] 2025-06-04 14:09:47,947 | INFO     | chi2: 0.8271169030613632
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | -- intersect: -285830900109.2258
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | current memory leak: 163.42 B/s (using 52 data points, chi2=0.83)
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | ..............................
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | . Timing measurements:
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | . get job = 0 s
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | . initial setup = 2 s
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | . payload setup = 5 s
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | . stage-in = 0 s
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | . payload execution = 3565 s
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | . stage-out = 0 s
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | . log creation = 0 s
[2025-06-04 10:10:01] 2025-06-04 14:09:47,948 | INFO     | ..............................
[2025-06-04 10:10:01] 2025-06-04 14:09:48,000 | INFO     | 
[2025-06-04 10:10:01] 2025-06-04 14:09:48,000 | INFO     | job summary report
[2025-06-04 10:10:01] 2025-06-04 14:09:48,000 | INFO     | --------------------------------------------------
[2025-06-04 10:10:01] 2025-06-04 14:09:48,000 | INFO     | PanDA job id: 6679293640
[2025-06-04 10:10:01] 2025-06-04 14:09:48,000 | INFO     | task id: 45006595
[2025-06-04 10:10:01] 2025-06-04 14:09:48,001 | INFO     | errors: (none)
[2025-06-04 10:10:01] 2025-06-04 14:09:48,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:10:01] 2025-06-04 14:09:48,001 | INFO     | pilot state: finished 
[2025-06-04 10:10:01] 2025-06-04 14:09:48,001 | INFO     | transexitcode: 0
[2025-06-04 10:10:01] 2025-06-04 14:09:48,001 | INFO     | exeerrorcode: 0
[2025-06-04 10:10:01] 2025-06-04 14:09:48,001 | INFO     | exeerrordiag: 
[2025-06-04 10:10:01] 2025-06-04 14:09:48,001 | INFO     | exitcode: 0
[2025-06-04 10:10:01] 2025-06-04 14:09:48,001 | INFO     | exitmsg: OK
[2025-06-04 10:10:01] 2025-06-04 14:09:48,001 | INFO     | cpuconsumptiontime: 23352 s
[2025-06-04 10:10:01] 2025-06-04 14:09:48,001 | INFO     | nevents: 400
[2025-06-04 10:10:01] 2025-06-04 14:09:48,001 | INFO     | neventsw: 0
[2025-06-04 10:10:01] 2025-06-04 14:09:48,002 | INFO     | pid: 101161
[2025-06-04 10:10:01] 2025-06-04 14:09:48,002 | INFO     | pgrp: 101161
[2025-06-04 10:10:01] 2025-06-04 14:09:48,002 | INFO     | corecount: 8
[2025-06-04 10:10:01] 2025-06-04 14:09:48,002 | INFO     | event service: False
[2025-06-04 10:10:01] 2025-06-04 14:09:48,002 | INFO     | sizes: {0: 2397121, 1: 2397320, 4: 2397526, 12: 2397554, 3574: 2423182, 3575: 2432123, 3576: 2432307, 3579: 2432477}
[2025-06-04 10:10:01] 2025-06-04 14:09:48,002 | INFO     | --------------------------------------------------
[2025-06-04 10:10:01] 2025-06-04 14:09:48,002 | INFO     | 
[2025-06-04 10:10:01] 2025-06-04 14:09:48,002 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:10:01] 2025-06-04 14:09:48,017 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,017 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,017 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,018 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,019 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:10:01] 2025-06-04 14:09:48,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,019 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:10:01] 2025-06-04 14:09:48,020 | INFO     | job 6679293640 has completed (purged errors)
[2025-06-04 10:10:01] 2025-06-04 14:09:48,020 | INFO     | overall cleanup function is called
[2025-06-04 10:10:01] 2025-06-04 14:09:49,028 | INFO     | --- collectZombieJob: --- 10, [101161]
[2025-06-04 10:10:01] 2025-06-04 14:09:49,028 | INFO     | zombie collector waiting for pid 101161
[2025-06-04 10:10:01] 2025-06-04 14:09:49,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:10:01] 2025-06-04 14:09:49,028 | INFO     | collected zombie processes
[2025-06-04 10:10:01] 2025-06-04 14:09:49,029 | INFO     | will attempt to kill all subprocesses of pid=101161
[2025-06-04 10:10:01] 2025-06-04 14:09:49,361 | INFO     | process IDs to be killed: [101161] (in reverse order)
[2025-06-04 10:10:01] 2025-06-04 14:09:49,466 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:10:01] 2025-06-04 14:09:49,466 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:10:01] 2025-06-04 14:09:49,481 | INFO     | did not find any defunct processes belonging to 101161
[2025-06-04 10:10:01] 2025-06-04 14:09:49,494 | INFO     | did not find any defunct processes belonging to 101161
[2025-06-04 10:10:01] 2025-06-04 14:09:49,494 | INFO     | ready for new job
[2025-06-04 10:10:01] 2025-06-04 14:09:49,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:10:01] 2025-06-04 14:09:49,496 | INFO     | **************************************
[2025-06-04 10:10:01] 2025-06-04 14:09:49,496 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:10:01] 2025-06-04 14:09:49,496 | INFO     | **************************************
[2025-06-04 10:10:01] 2025-06-04 14:09:49,497 | INFO     | 
[2025-06-04 10:10:01] 2025-06-04 14:09:49,513 | INFO     | architecture information:
[2025-06-04 10:10:01] 2025-06-04 14:09:49,514 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:10:01] 2025-06-04 14:09:49,530 | INFO     | cat /etc/os-release:
[2025-06-04 10:10:01] NAME="CentOS Linux"
[2025-06-04 10:10:01] VERSION="7 (Core)"
[2025-06-04 10:10:01] ID="centos"
[2025-06-04 10:10:01] ID_LIKE="rhel fedora"
[2025-06-04 10:10:01] VERSION_ID="7"
[2025-06-04 10:10:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:10:01] ANSI_COLOR="0;31"
[2025-06-04 10:10:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:10:01] HOME_URL="https://www.centos.org/"
[2025-06-04 10:10:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:10:01] 
[2025-06-04 10:10:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:10:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:10:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:10:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:10:01] 
[2025-06-04 10:10:01] 2025-06-04 14:09:49,531 | INFO     | **************************************
[2025-06-04 10:10:01] 2025-06-04 14:09:50,034 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:10:01] 2025-06-04 14:09:50,051 | INFO     | sufficient remaining disk space (95601819648 B)
[2025-06-04 10:10:01] 2025-06-04 14:09:50,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:10:01] 2025-06-04 14:09:50,051 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:10:01] 2025-06-04 14:09:50,051 | INFO     | update_server=False
[2025-06-04 10:10:01] 2025-06-04 14:09:50,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:10:01] 2025-06-04 14:09:50,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:10:01] 2025-06-04 14:09:50,052 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:10:01] 2025-06-04 14:09:50,053 | INFO     | aborting loop
[2025-06-04 10:10:01] 2025-06-04 14:09:50,081 | INFO     | all payload control threads have been joined
[2025-06-04 10:10:01] 2025-06-04 14:09:50,185 | INFO     | all job control threads have been joined
[2025-06-04 10:10:01] 2025-06-04 14:09:50,187 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:10:01] 2025-06-04 14:09:50,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:10:01] 2025-06-04 14:09:50,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:10:01] 2025-06-04 14:09:50,573 [wrapper] supervise_pilot (15 min periods counter: 5)
[2025-06-04 10:10:01] 2025-06-04 14:09:50,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:10:01] 2025-06-04 14:09:50,954 | INFO     | all data control threads have been joined
[2025-06-04 10:10:01] 2025-06-04 14:09:51,054 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:51,057 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:51,057 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:51,086 | INFO     | [payload] control thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:51,191 | INFO     | [job] control thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:51,379 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:51,662 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:51,673 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:51,775 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:51,939 | INFO     | [job] validate thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:51,959 | INFO     | [data] control thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:52,058 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:52,233 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:52,287 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:53,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:10:01] 2025-06-04 14:09:54,015 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:54,831 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:10:01] 2025-06-04 14:09:56,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140461389567808)>', '<ExcThread(monitor, started 140461033371392)>']
[2025-06-04 10:10:01] 2025-06-04 14:09:57,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:10:01] 2025-06-04 14:09:57,223 | INFO     | [monitor] control thread has ended
[2025-06-04 10:10:01] 2025-06-04 14:10:01,642 | INFO     | all workflow threads have been joined
[2025-06-04 10:10:01] 2025-06-04 14:10:01,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:10:01] 2025-06-04 14:10:01,643 | INFO     | traces error code: 0
[2025-06-04 10:10:01] 2025-06-04 14:10:01,643 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:10:01] 2025-06-04 14:10:01,771 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:10:01] 2025-06-04 14:10:01,773 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:10:01] 2025-06-04 14:10:01,775 [wrapper] pilotpid: 93614
[2025-06-04 10:10:01] 2025-06-04 14:10:01,776 [wrapper] Pilot exit status: 0
[2025-06-04 10:10:01] 2025-06-04 14:10:01,784 [wrapper] pandaids: 6679293640
[2025-06-04 10:10:01] 2025-06-04 14:10:01,830 [wrapper] cleanup supervisor_pilot  263808 93615
[2025-06-04 10:10:01] 2025-06-04 14:10:01,833 [wrapper] Test setup, not cleaning
[2025-06-04 10:10:01] 2025-06-04 14:10:01,835 [wrapper] apfmon messages muted
[2025-06-04 10:10:01] 2025-06-04 14:10:01,837 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:10:01] 2025-06-04 14:10:01,838 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:10:01]  *** Error codes and diagnostics ***
[2025-06-04 10:10:01]     "exeErrorCode": 0,
[2025-06-04 10:10:01]     "exeErrorDiag": "",
[2025-06-04 10:10:01]     "pilotErrorCode": 0,
[2025-06-04 10:10:01]     "pilotErrorDiag": "",
[2025-06-04 10:10:01]  *** Listing of results directory ***
[2025-06-04 10:10:01] total 392936
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:58 queuedata.json
[2025-06-04 10:10:01] -rwx------. 1 boincer umatlas     37140 Jun  4 05:00 runpilot2-wrapper.sh
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:10:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:09 run_atlas
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:09 job.xml
[2025-06-04 10:10:01] -rw-r--r--. 2 boincer umatlas 214618807 Jun  4 09:09 EVNT.45006593._001664.pool.root.1
[2025-06-04 10:10:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:09 start_atlas.sh
[2025-06-04 10:10:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:09 shared
[2025-06-04 10:10:01] -rw-r--r--. 2 boincer umatlas    508889 Jun  4 09:09 input.tar.gz
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:09 boinc_lockfile
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 09:09 pandaJob.out
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas    986811 Jun  4 09:09 agis_schedconf.cvmfs.json
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:10:01] drwx------. 4 boincer umatlas      4096 Jun  4 09:09 pilot3
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas        95 Jun  4 10:09 pilot_heartbeat.json
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas 182613563 Jun  4 10:09 HITS.45006595._056108.pool.root.1
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:09 boinc_task_state.xml
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas      6860 Jun  4 10:09 init_data.xml
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas      1031 Jun  4 10:09 memory_monitor_summary.json
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas    287290 Jun  4 10:09 log.45006595._056108.job.log.tgz.1
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:09 boinc_mmap_file
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:09 wrapper_checkpoint.txt
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas      7713 Jun  4 10:09 heartbeat.json
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas      4353 Jun  4 10:10 pilotlog.txt
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas    361092 Jun  4 10:10 log.45006595._056108.job.log.1
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas       357 Jun  4 10:10 output.list
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:10 runtime_log
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas    665600 Jun  4 10:10 result.tar.gz
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas       652 Jun  4 10:10 tabKDmQAzg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmD0aKDmXouZBo.diag
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 10:10 runtime_log.err
[2025-06-04 10:10:01] -rw-r--r--. 1 boincer umatlas     20925 Jun  4 10:10 stderr.txt
[2025-06-04 10:10:01] HITS file was successfully produced:
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas 182613563 Jun  4 10:09 shared/HITS.pool.root.1
[2025-06-04 10:10:01]  *** Contents of shared directory: ***
[2025-06-04 10:10:01] total 389104
[2025-06-04 10:10:01] -rw-r--r--. 2 boincer umatlas 214618807 Jun  4 09:09 ATLAS.root_0
[2025-06-04 10:10:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:09 start_atlas.sh
[2025-06-04 10:10:01] -rw-r--r--. 2 boincer umatlas    508889 Jun  4 09:09 input.tar.gz
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas 182613563 Jun  4 10:09 HITS.pool.root.1
[2025-06-04 10:10:01] -rw-------. 1 boincer umatlas    665600 Jun  4 10:10 result.tar.gz
10:10:03 (89889): run_atlas exited; CPU time 23486.501520
10:10:03 (89889): called boinc_finish(0)

</stderr_txt>
]]>

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