Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:00:53 (873323): wrapper (7.7.26015): starting
10:00:53 (873323): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 10:00:53] Arguments: --nthreads 12
[2025-06-04 10:00:53] Threads: 12
[2025-06-04 10:00:53] Checking for CVMFS
[2025-06-04 10:00:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:00:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:00:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:00:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:00:53] 2.12.6.0 665990 23396 425276 146781 2 150 30413773 32935937 6173 16776704 1 81766874 99.623 78765138 33879 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:00:53] CVMFS is ok
[2025-06-04 10:00:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:00:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:00:53] Further information can be found at the LHC@home message board.
[2025-06-04 10:00:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:00:53] Checking for apptainer binary...
[2025-06-04 10:00:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:00:53] Running /usr/bin/apptainer --version
[2025-06-04 10:00:53] apptainer version 1.4.1-1.el9
[2025-06-04 10:00:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:00:53] c6-6-39-1.aglt2.org
[2025-06-04 10:00:53] apptainer works
[2025-06-04 10:00:53] Set ATHENA_PROC_NUMBER=12
[2025-06-04 10:00:53] Set ATHENA_CORE_NUMBER=12
[2025-06-04 10:00:53] Starting ATLAS job with PandaID=6679293622
[2025-06-04 10:00:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:48:23]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:48:23]  guid=e5403cbe-94d3-48d6-a3f5-0531edc772e7
[2025-06-04 10:48:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:48:23]  is_altstaged=None
[2025-06-04 10:48:23]  is_tar=False
[2025-06-04 10:48:23]  lfn=log.45006595._056090.job.log.tgz.1
[2025-06-04 10:48:23]  mtime=0
[2025-06-04 10:48:23]  protocol_id=None
[2025-06-04 10:48:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:48:23]  replicas=None
[2025-06-04 10:48:23]  scope=mc23_13p6TeV
[2025-06-04 10:48:23]  status=None
[2025-06-04 10:48:23]  status_code=0
[2025-06-04 10:48:23]  storage_token=
[2025-06-04 10:48:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679293622/log.45006595._056090.job.log.tgz.1
[2025-06-04 10:48:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/4b/log.45006595._056090.job.log.tgz.1
[2025-06-04 10:48:23]  workdir=None
[2025-06-04 10:48:23] ]
[2025-06-04 10:48:23] 2025-06-04 14:48:05,917 | INFO     | transferring file log.45006595._056090.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679293622/log.45006595._056090.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:48:23] 2025-06-04 14:48:05,917 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679293622/log.45006595._056090.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056090.job
[2025-06-04 10:48:23] 2025-06-04 14:48:05,933 | INFO     | adding to output.list: log.45006595._056090.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/4b/log.45006595._056090.job.log.tg
[2025-06-04 10:48:23] 2025-06-04 14:48:05,934 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:48:23] 2025-06-04 14:48:05,934 | INFO     | summary of transferred files:
[2025-06-04 10:48:23] 2025-06-04 14:48:05,934 | INFO     |  -- lfn=log.45006595._056090.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:48:23] 2025-06-04 14:48:05,934 | INFO     | stage-out finished correctly
[2025-06-04 10:48:23] 2025-06-04 14:48:06,799 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:48:23] 2025-06-04 14:48:07,409 | INFO     | job 6679293622 has state=finished
[2025-06-04 10:48:23] 2025-06-04 14:48:07,409 | INFO     | preparing for final server update for job 6679293622 in state='finished'
[2025-06-04 10:48:23] 2025-06-04 14:48:07,410 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:48:23] 2025-06-04 14:48:07,410 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:48:23] 2025-06-04 14:48:07,410 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:48:23] 2025-06-04 14:48:07,410 | INFO     | job 6679293622 has finished - writing final server update
[2025-06-04 10:48:23] 2025-06-04 14:48:07,410 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:48:23] 2025-06-04 14:48:07,425 | INFO     | executing command: lscpu
[2025-06-04 10:48:23] 2025-06-04 14:48:07,484 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:48:23] 2025-06-04 14:48:07,530 | INFO     | monitor loop #216: job 0:6679293622 is in state 'finished'
[2025-06-04 10:48:23] 2025-06-04 14:48:07,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:48:23] 2025-06-04 14:48:10,034 | INFO     | monitor loop #217: job 0:6679293622 is in state 'finished'
[2025-06-04 10:48:23] 2025-06-04 14:48:10,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:48:23] 2025-06-04 14:48:10,362 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:48:23] 2025-06-04 14:48:10,363 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679293622/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:48:23] 2025-06-04 14:48:10,363 | INFO     | extracted standard info from prmon json
[2025-06-04 10:48:23] 2025-06-04 14:48:10,364 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:48:23] 2025-06-04 14:48:10,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:48:23] 2025-06-04 14:48:10,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:48:23] 2025-06-04 14:48:10,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:48:23] 2025-06-04 14:48:10,365 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:48:23] 2025-06-04 14:48:10,365 | INFO     | sum of square deviations: 18381740.0
[2025-06-04 10:48:23] 2025-06-04 14:48:10,365 | INFO     | sum of deviations: 2457088540.0
[2025-06-04 10:48:23] 2025-06-04 14:48:10,365 | INFO     | mean x: 1749047149.0
[2025-06-04 10:48:23] 2025-06-04 14:48:10,365 | INFO     | mean y: 2572161.487179487
[2025-06-04 10:48:23] 2025-06-04 14:48:10,365 | INFO     | -- intersect: -233792689099.28424
[2025-06-04 10:48:23] 2025-06-04 14:48:10,365 | INFO     | intersect: -233792689099.28424
[2025-06-04 10:48:23] 2025-06-04 14:48:10,365 | INFO     | chi2: 0.9199224852588922
[2025-06-04 10:48:23] 2025-06-04 14:48:10,365 | INFO     | -- intersect: -233792689099.28424
[2025-06-04 10:48:23] 2025-06-04 14:48:10,365 | INFO     | current memory leak: 133.67 B/s (using 39 data points, chi2=0.92)
[2025-06-04 10:48:23] 2025-06-04 14:48:10,366 | INFO     | ..............................
[2025-06-04 10:48:23] 2025-06-04 14:48:10,366 | INFO     | . Timing measurements:
[2025-06-04 10:48:23] 2025-06-04 14:48:10,366 | INFO     | . get job = 0 s
[2025-06-04 10:48:23] 2025-06-04 14:48:10,366 | INFO     | . initial setup = 2 s
[2025-06-04 10:48:23] 2025-06-04 14:48:10,366 | INFO     | . payload setup = 5 s
[2025-06-04 10:48:23] 2025-06-04 14:48:10,366 | INFO     | . stage-in = 0 s
[2025-06-04 10:48:23] 2025-06-04 14:48:10,366 | INFO     | . payload execution = 2799 s
[2025-06-04 10:48:23] 2025-06-04 14:48:10,366 | INFO     | . stage-out = 0 s
[2025-06-04 10:48:23] 2025-06-04 14:48:10,366 | INFO     | . log creation = 0 s
[2025-06-04 10:48:23] 2025-06-04 14:48:10,366 | INFO     | ..............................
[2025-06-04 10:48:23] 2025-06-04 14:48:10,686 | INFO     | 
[2025-06-04 10:48:23] 2025-06-04 14:48:10,686 | INFO     | job summary report
[2025-06-04 10:48:23] 2025-06-04 14:48:10,686 | INFO     | --------------------------------------------------
[2025-06-04 10:48:23] 2025-06-04 14:48:10,686 | INFO     | PanDA job id: 6679293622
[2025-06-04 10:48:23] 2025-06-04 14:48:10,686 | INFO     | task id: 45006595
[2025-06-04 10:48:23] 2025-06-04 14:48:10,686 | INFO     | errors: (none)
[2025-06-04 10:48:23] 2025-06-04 14:48:10,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:48:23] 2025-06-04 14:48:10,686 | INFO     | pilot state: finished 
[2025-06-04 10:48:23] 2025-06-04 14:48:10,686 | INFO     | transexitcode: 0
[2025-06-04 10:48:23] 2025-06-04 14:48:10,686 | INFO     | exeerrorcode: 0
[2025-06-04 10:48:23] 2025-06-04 14:48:10,686 | INFO     | exeerrordiag: 
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | exitcode: 0
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | exitmsg: OK
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | cpuconsumptiontime: 26018 s
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | nevents: 400
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | neventsw: 0
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | pid: 885428
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | pgrp: 885428
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | corecount: 12
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | event service: False
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | sizes: {0: 2396456, 1: 2397312, 4: 2397518, 11: 2397546, 2808: 2422837, 2810: 2431778, 2811: 2431962, 2814: 2432132}
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | --------------------------------------------------
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | 
[2025-06-04 10:48:23] 2025-06-04 14:48:10,687 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:48:23] 2025-06-04 14:48:10,701 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,702 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,703 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,703 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:48:23] 2025-06-04 14:48:10,703 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,703 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:48:23] 2025-06-04 14:48:10,703 | INFO     | job 6679293622 has completed (purged errors)
[2025-06-04 10:48:23] 2025-06-04 14:48:10,703 | INFO     | overall cleanup function is called
[2025-06-04 10:48:23] 2025-06-04 14:48:11,711 | INFO     | --- collectZombieJob: --- 10, [885428]
[2025-06-04 10:48:23] 2025-06-04 14:48:11,711 | INFO     | zombie collector waiting for pid 885428
[2025-06-04 10:48:23] 2025-06-04 14:48:11,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:48:23] 2025-06-04 14:48:11,711 | INFO     | collected zombie processes
[2025-06-04 10:48:23] 2025-06-04 14:48:11,711 | INFO     | will attempt to kill all subprocesses of pid=885428
[2025-06-04 10:48:23] 2025-06-04 14:48:11,905 | INFO     | process IDs to be killed: [885428] (in reverse order)
[2025-06-04 10:48:23] 2025-06-04 14:48:11,955 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:48:23] 2025-06-04 14:48:11,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:48:23] 2025-06-04 14:48:11,965 | INFO     | did not find any defunct processes belonging to 885428
[2025-06-04 10:48:23] 2025-06-04 14:48:11,973 | INFO     | did not find any defunct processes belonging to 885428
[2025-06-04 10:48:23] 2025-06-04 14:48:11,973 | INFO     | ready for new job
[2025-06-04 10:48:23] 2025-06-04 14:48:11,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:48:23] 2025-06-04 14:48:11,975 | INFO     | **************************************
[2025-06-04 10:48:23] 2025-06-04 14:48:11,975 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:48:23] 2025-06-04 14:48:11,975 | INFO     | **************************************
[2025-06-04 10:48:23] 2025-06-04 14:48:11,975 | INFO     | 
[2025-06-04 10:48:23] 2025-06-04 14:48:11,990 | INFO     | architecture information:
[2025-06-04 10:48:23] 2025-06-04 14:48:11,990 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:48:23] 2025-06-04 14:48:12,002 | INFO     | cat /etc/os-release:
[2025-06-04 10:48:23] NAME="CentOS Linux"
[2025-06-04 10:48:23] VERSION="7 (Core)"
[2025-06-04 10:48:23] ID="centos"
[2025-06-04 10:48:23] ID_LIKE="rhel fedora"
[2025-06-04 10:48:23] VERSION_ID="7"
[2025-06-04 10:48:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:48:23] ANSI_COLOR="0;31"
[2025-06-04 10:48:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:48:23] HOME_URL="https://www.centos.org/"
[2025-06-04 10:48:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:48:23] 
[2025-06-04 10:48:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:48:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:48:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:48:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:48:23] 
[2025-06-04 10:48:23] 2025-06-04 14:48:12,002 | INFO     | **************************************
[2025-06-04 10:48:23] 2025-06-04 14:48:12,505 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:48:23] 2025-06-04 14:48:12,517 | INFO     | sufficient remaining disk space (76375130112 B)
[2025-06-04 10:48:23] 2025-06-04 14:48:12,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:48:23] 2025-06-04 14:48:12,518 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:48:23] 2025-06-04 14:48:12,518 | INFO     | update_server=False
[2025-06-04 10:48:23] 2025-06-04 14:48:12,518 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:48:23] 2025-06-04 14:48:12,518 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:48:23] 2025-06-04 14:48:12,519 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:48:23] 2025-06-04 14:48:12,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:48:23] 2025-06-04 14:48:12,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:48:23] 2025-06-04 14:48:12,537 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:48:23] 2025-06-04 14:48:12,538 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:48:23] 2025-06-04 14:48:12,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:48:23] 2025-06-04 14:48:12,538 | INFO     | will abort loop
[2025-06-04 10:48:23] 2025-06-04 14:48:12,551 | INFO     | all job control threads have been joined
[2025-06-04 10:48:23] 2025-06-04 14:48:12,929 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:48:23] 2025-06-04 14:48:13,186 | INFO     | all payload control threads have been joined
[2025-06-04 10:48:23] 2025-06-04 14:48:13,521 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:13,543 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:13,555 | INFO     | all data control threads have been joined
[2025-06-04 10:48:23] 2025-06-04 14:48:13,556 | INFO     | [job] control thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:14,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:48:23] 2025-06-04 14:48:14,192 | INFO     | [payload] control thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:14,366 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:14,425 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:14,436 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:14,561 | INFO     | [data] control thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:14,771 | INFO     | [job] validate thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:14,865 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:14,912 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:14,940 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:15,047 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:15,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:48:23] 2025-06-04 14:48:16,025 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:16,440 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:16,935 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:48:23] 2025-06-04 14:48:18,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600057861952)>', '<ExcThread(monitor, started 140599420241664)>']
[2025-06-04 10:48:23] 2025-06-04 14:48:18,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:48:23] 2025-06-04 14:48:18,549 | INFO     | [monitor] control thread has ended
[2025-06-04 10:48:23] 2025-06-04 14:48:23,190 | INFO     | all workflow threads have been joined
[2025-06-04 10:48:23] 2025-06-04 14:48:23,190 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:48:23] 2025-06-04 14:48:23,190 | INFO     | traces error code: 0
[2025-06-04 10:48:23] 2025-06-04 14:48:23,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:48:23] 2025-06-04 14:48:23,324 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:48:23] 2025-06-04 14:48:23,327 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:48:23] 2025-06-04 14:48:23,328 [wrapper] pilotpid: 876980
[2025-06-04 10:48:23] 2025-06-04 14:48:23,330 [wrapper] Pilot exit status: 0
[2025-06-04 10:48:23] 2025-06-04 14:48:23,337 [wrapper] pandaids: 6679293622
[2025-06-04 10:48:23] 2025-06-04 14:48:23,371 [wrapper] cleanup supervisor_pilot  967962 876981
[2025-06-04 10:48:23] 2025-06-04 14:48:23,373 [wrapper] Test setup, not cleaning
[2025-06-04 10:48:23] 2025-06-04 14:48:23,375 [wrapper] apfmon messages muted
[2025-06-04 10:48:23] 2025-06-04 14:48:23,377 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:48:23] 2025-06-04 14:48:23,378 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:48:23]  *** Error codes and diagnostics ***
[2025-06-04 10:48:23]     "exeErrorCode": 0,
[2025-06-04 10:48:23]     "exeErrorDiag": "",
[2025-06-04 10:48:23]     "pilotErrorCode": 0,
[2025-06-04 10:48:23]     "pilotErrorDiag": "",
[2025-06-04 10:48:23]  *** Listing of results directory ***
[2025-06-04 10:48:23] total 387780
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:56 queuedata.json
[2025-06-04 10:48:23] -rwx------. 1 boincer umatlas     37140 Jun  4 04:57 runpilot2-wrapper.sh
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:48:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:00 run_atlas
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:00 job.xml
[2025-06-04 10:48:23] -rw-r--r--. 2 boincer umatlas 213923291 Jun  4 10:00 EVNT.45006593._000098.pool.root.1
[2025-06-04 10:48:23] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:00 start_atlas.sh
[2025-06-04 10:48:23] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:00 shared
[2025-06-04 10:48:23] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 10:00 input.tar.gz
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:00 boinc_lockfile
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas      2521 Jun  4 10:00 pandaJob.out
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas    986819 Jun  4 10:00 agis_schedconf.cvmfs.json
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:48:23] drwx------. 4 boincer umatlas      4096 Jun  4 10:01 pilot3
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 10:46 init_data.xml
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas 178024785 Jun  4 10:47 HITS.45006595._056090.pool.root.1
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas        95 Jun  4 10:47 pilot_heartbeat.json
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:47 boinc_task_state.xml
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas      1027 Jun  4 10:48 memory_monitor_summary.json
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas    352219 Jun  4 10:48 log.45006595._056090.job.log.tgz.1
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas      7707 Jun  4 10:48 heartbeat.json
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:48 boinc_mmap_file
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:48 wrapper_checkpoint.txt
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas      4662 Jun  4 10:48 pilotlog.txt
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas    301319 Jun  4 10:48 log.45006595._056090.job.log.1
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas       357 Jun  4 10:48 output.list
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:48 runtime_log
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas    675840 Jun  4 10:48 result.tar.gz
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 10:48 runtime_log.err
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas       651 Jun  4 10:48 LazMDm26yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBsnKDmbHav3n.diag
[2025-06-04 10:48:23] -rw-r--r--. 1 boincer umatlas     21312 Jun  4 10:48 stderr.txt
[2025-06-04 10:48:23] HITS file was successfully produced:
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas 178024785 Jun  4 10:47 shared/HITS.pool.root.1
[2025-06-04 10:48:23]  *** Contents of shared directory: ***
[2025-06-04 10:48:23] total 383948
[2025-06-04 10:48:23] -rw-r--r--. 2 boincer umatlas 213923291 Jun  4 10:00 ATLAS.root_0
[2025-06-04 10:48:23] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:00 start_atlas.sh
[2025-06-04 10:48:23] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 10:00 input.tar.gz
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas 178024785 Jun  4 10:47 HITS.pool.root.1
[2025-06-04 10:48:23] -rw-------. 1 boincer umatlas    675840 Jun  4 10:48 result.tar.gz
10:48:24 (873323): run_atlas exited; CPU time 26064.355153
10:48:24 (873323): called boinc_finish(0)

</stderr_txt>
]]>

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