Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:04:48 (1094856): wrapper (7.7.26015): starting
06:04:48 (1094856): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 06:04:48] Arguments: --nthreads 4
[2025-06-06 06:04:48] Threads: 4
[2025-06-06 06:04:48] Checking for CVMFS
[2025-06-06 06:04:48] No cvmfs_config command found, will try listing directly
[2025-06-06 06:04:48] CVMFS is ok
[2025-06-06 06:04:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 06:04:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 06:04:48] Further information can be found at the LHC@home message board.
[2025-06-06 06:04:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:04:48] Checking for apptainer binary...
[2025-06-06 06:04:48] which: no apptainer in ((null))
[2025-06-06 06:04:48] apptainer is not installed, using version from CVMFS
[2025-06-06 06:04:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:04:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-06 06:04:48] apptainer works
[2025-06-06 06:04:48] Set ATHENA_PROC_NUMBER=4
[2025-06-06 06:04:48] Set ATHENA_CORE_NUMBER=4
[2025-06-06 06:04:48] Starting ATLAS job with PandaID=6679367318
[2025-06-06 06:04:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 08:24:54]  *** The last 200 lines of the pilot log: ***
[2025-06-06 08:24:54] 2025-06-06 06:21:06,501 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6679367318/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 08:24:54] 2025-06-06 06:21:06,501 | INFO     | extracted standard info from prmon json
[2025-06-06 08:24:54] 2025-06-06 06:21:06,501 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 08:24:54] 2025-06-06 06:21:06,501 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 08:24:54] 2025-06-06 06:21:06,502 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 08:24:54] 2025-06-06 06:21:06,502 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 08:24:54] 2025-06-06 06:21:06,503 | INFO     | fitting pss+swap vs Time
[2025-06-06 08:24:54] 2025-06-06 06:21:06,503 | INFO     | sum of square deviations: 746051197.5
[2025-06-06 08:24:54] 2025-06-06 06:21:06,504 | INFO     | sum of deviations: 16374745266.999996
[2025-06-06 08:24:54] 2025-06-06 06:21:06,504 | INFO     | mean x: 1749186780.5
[2025-06-06 08:24:54] 2025-06-06 06:21:06,504 | INFO     | mean y: 2270795.6268656715
[2025-06-06 08:24:54] 2025-06-06 06:21:06,504 | INFO     | -- intersect: -38389850349.773926
[2025-06-06 08:24:54] 2025-06-06 06:21:06,504 | INFO     | intersect: -38389850349.773926
[2025-06-06 08:24:54] 2025-06-06 06:21:06,504 | INFO     | chi2: 2.3408949688029503
[2025-06-06 08:24:54] 2025-06-06 06:21:06,504 | INFO     | sum of square deviations: 665612480.0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,505 | INFO     | sum of deviations: 23079820981.000004
[2025-06-06 08:24:54] 2025-06-06 06:21:06,505 | INFO     | mean x: 1749186628.0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,505 | INFO     | mean y: 2283069.7829457363
[2025-06-06 08:24:54] 2025-06-06 06:21:06,505 | INFO     | -- intersect: -60649996521.788185
[2025-06-06 08:24:54] 2025-06-06 06:21:06,505 | INFO     | intersect: -60649996521.788185
[2025-06-06 08:24:54] 2025-06-06 06:21:06,505 | INFO     | chi2: 1.6812417706884495
[2025-06-06 08:24:54] 2025-06-06 06:21:06,505 | INFO     | current chi2=1.6812417706884495 (change=28.179529919354895 %)
[2025-06-06 08:24:54] 2025-06-06 06:21:06,505 | INFO     | sum of square deviations: 591173875.0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,505 | INFO     | sum of deviations: 22036643114.499992
[2025-06-06 08:24:54] 2025-06-06 06:21:06,505 | INFO     | mean x: 1749186475.5
[2025-06-06 08:24:54] 2025-06-06 06:21:06,506 | INFO     | mean y: 2280934.1370967743
[2025-06-06 08:24:54] 2025-06-06 06:21:06,506 | INFO     | -- intersect: -65200529493.342606
[2025-06-06 08:24:54] 2025-06-06 06:21:06,506 | INFO     | intersect: -65200529493.342606
[2025-06-06 08:24:54] 2025-06-06 06:21:06,506 | INFO     | chi2: 1.6829046129906928
[2025-06-06 08:24:54] 2025-06-06 06:21:06,506 | INFO     | current chi2=1.6829046129906928 (change=-0.0989056024680153 %)
[2025-06-06 08:24:54] 2025-06-06 06:21:06,506 | INFO     | right removable region: 123
[2025-06-06 08:24:54] 2025-06-06 06:21:06,506 | INFO     | sum of square deviations: 665612480.0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,506 | INFO     | sum of deviations: -5306915942.0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,506 | INFO     | mean x: 1749186933.0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,506 | INFO     | mean y: 2311328.031007752
[2025-06-06 08:24:54] 2025-06-06 06:21:06,506 | INFO     | -- intersect: 13948546260.819206
[2025-06-06 08:24:54] 2025-06-06 06:21:06,507 | INFO     | intersect: 13948546260.819206
[2025-06-06 08:24:54] 2025-06-06 06:21:06,507 | INFO     | chi2: 0.6923435518230925
[2025-06-06 08:24:54] 2025-06-06 06:21:06,507 | INFO     | current chi2=0.6923435518230925 (change=70.42398052668155 %)
[2025-06-06 08:24:54] 2025-06-06 06:21:06,507 | INFO     | sum of square deviations: 591173875.0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,507 | INFO     | sum of deviations: -5107381922.5
[2025-06-06 08:24:54] 2025-06-06 06:21:06,507 | INFO     | mean x: 1749187085.5
[2025-06-06 08:24:54] 2025-06-06 06:21:06,507 | INFO     | mean y: 2310865.379032258
[2025-06-06 08:24:54] 2025-06-06 06:21:06,507 | INFO     | -- intersect: 15114221045.024845
[2025-06-06 08:24:54] 2025-06-06 06:21:06,507 | INFO     | intersect: 15114221045.024845
[2025-06-06 08:24:54] 2025-06-06 06:21:06,507 | INFO     | chi2: 0.6888094500710216
[2025-06-06 08:24:54] 2025-06-06 06:21:06,508 | INFO     | current chi2=0.6888094500710216 (change=0.5104549241146036 %)
[2025-06-06 08:24:54] 2025-06-06 06:21:06,508 | INFO     | left removable region: 20
[2025-06-06 08:24:54] 2025-06-06 06:21:06,508 | INFO     | sum of square deviations: 338804492.0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,508 | INFO     | sum of deviations: 1045597279.0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,508 | INFO     | mean x: 1749187055.0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,508 | INFO     | mean y: 2327142.0485436893
[2025-06-06 08:24:54] 2025-06-06 06:21:06,508 | INFO     | -- intersect: -5395904783.312184
[2025-06-06 08:24:54] 2025-06-06 06:21:06,508 | INFO     | intersect: -5395904783.312184
[2025-06-06 08:24:54] 2025-06-06 06:21:06,508 | INFO     | chi2: 0.0004640930174252951
[2025-06-06 08:24:54] 2025-06-06 06:21:06,508 | INFO     | -- intersect: -5395904783.312184
[2025-06-06 08:24:54] 2025-06-06 06:21:06,508 | INFO     | current memory leak: 3.09 B/s (using 103 data points, chi2=0.00)
[2025-06-06 08:24:54] 2025-06-06 06:21:06,509 | INFO     | ..............................
[2025-06-06 08:24:54] 2025-06-06 06:21:06,509 | INFO     | . Timing measurements:
[2025-06-06 08:24:54] 2025-06-06 06:21:06,509 | INFO     | . get job = 0 s
[2025-06-06 08:24:54] 2025-06-06 06:21:06,509 | INFO     | . initial setup = 1 s
[2025-06-06 08:24:54] 2025-06-06 06:21:06,509 | INFO     | . payload setup = 6 s
[2025-06-06 08:24:54] 2025-06-06 06:21:06,509 | INFO     | . stage-in = 0 s
[2025-06-06 08:24:54] 2025-06-06 06:21:06,509 | INFO     | . payload execution = 8134 s
[2025-06-06 08:24:54] 2025-06-06 06:21:06,509 | INFO     | . stage-out = 0 s
[2025-06-06 08:24:54] 2025-06-06 06:21:06,509 | INFO     | . log creation = 0 s
[2025-06-06 08:24:54] 2025-06-06 06:21:06,509 | INFO     | ..............................
[2025-06-06 08:24:54] 2025-06-06 06:21:06,561 | INFO     | 
[2025-06-06 08:24:54] 2025-06-06 06:21:06,561 | INFO     | job summary report
[2025-06-06 08:24:54] 2025-06-06 06:21:06,561 | INFO     | --------------------------------------------------
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | PanDA job id: 6679367318
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | task id: 45006595
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | errors: (none)
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | pilot state: finished 
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | transexitcode: 0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | exeerrorcode: 0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | exeerrordiag: 
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | exitcode: 0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | exitmsg: OK
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | cpuconsumptiontime: 30924 s
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | nevents: 400
[2025-06-06 08:24:54] 2025-06-06 06:21:06,562 | INFO     | neventsw: 0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,563 | INFO     | pid: 1105832
[2025-06-06 08:24:54] 2025-06-06 06:21:06,563 | INFO     | pgrp: 1105832
[2025-06-06 08:24:54] 2025-06-06 06:21:06,563 | INFO     | corecount: 4
[2025-06-06 08:24:54] 2025-06-06 06:21:06,563 | INFO     | event service: False
[2025-06-06 08:24:54] 2025-06-06 06:21:06,563 | INFO     | sizes: {0: 2397297, 4: 2397503, 11: 2397531, 8144: 2425213, 8145: 2434176, 8146: 2434232, 8153: 2434530}
[2025-06-06 08:24:54] 2025-06-06 06:21:06,563 | INFO     | --------------------------------------------------
[2025-06-06 08:24:54] 2025-06-06 06:21:06,563 | INFO     | 
[2025-06-06 08:24:54] 2025-06-06 06:21:06,563 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-06-06 08:24:54] 2025-06-06 06:21:06,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,579 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,579 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 08:24:54] 2025-06-06 06:21:06,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,579 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 08:24:54] 2025-06-06 06:21:06,579 | INFO     | job 6679367318 has completed (purged errors)
[2025-06-06 08:24:54] 2025-06-06 06:21:06,579 | INFO     | overall cleanup function is called
[2025-06-06 08:24:54] 2025-06-06 06:21:07,586 | INFO     | --- collectZombieJob: --- 10, [1105832]
[2025-06-06 08:24:54] 2025-06-06 06:21:07,587 | INFO     | zombie collector waiting for pid 1105832
[2025-06-06 08:24:54] 2025-06-06 06:21:07,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 08:24:54] 2025-06-06 06:21:07,587 | INFO     | collected zombie processes
[2025-06-06 08:24:54] 2025-06-06 06:21:07,587 | INFO     | will attempt to kill all subprocesses of pid=1105832
[2025-06-06 08:24:54] 2025-06-06 06:21:07,883 | INFO     | process IDs to be killed: [1105832] (in reverse order)
[2025-06-06 08:24:54] 2025-06-06 06:21:07,973 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 08:24:54] 2025-06-06 06:21:07,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 08:24:54] 2025-06-06 06:21:07,984 | INFO     | did not find any defunct processes belonging to 1105832
[2025-06-06 08:24:54] 2025-06-06 06:21:07,994 | INFO     | did not find any defunct processes belonging to 1105832
[2025-06-06 08:24:54] 2025-06-06 06:21:07,994 | INFO     | ready for new job
[2025-06-06 08:24:54] 2025-06-06 06:21:07,994 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 08:24:54] 2025-06-06 06:21:07,996 | INFO     | **************************************
[2025-06-06 08:24:54] 2025-06-06 06:21:07,996 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 08:24:54] 2025-06-06 06:21:07,996 | INFO     | **************************************
[2025-06-06 08:24:54] 2025-06-06 06:21:07,996 | INFO     | 
[2025-06-06 08:24:54] 2025-06-06 06:21:08,000 | INFO     | architecture information:
[2025-06-06 08:24:54] 2025-06-06 06:21:08,000 | INFO     | executing command: cat /etc/os-release
[2025-06-06 08:24:54] 2025-06-06 06:21:08,014 | INFO     | cat /etc/os-release:
[2025-06-06 08:24:54] NAME="CentOS Linux"
[2025-06-06 08:24:54] VERSION="7 (Core)"
[2025-06-06 08:24:54] ID="centos"
[2025-06-06 08:24:54] ID_LIKE="rhel fedora"
[2025-06-06 08:24:54] VERSION_ID="7"
[2025-06-06 08:24:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 08:24:54] ANSI_COLOR="0;31"
[2025-06-06 08:24:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 08:24:54] HOME_URL="https://www.centos.org/"
[2025-06-06 08:24:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 08:24:54] 
[2025-06-06 08:24:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 08:24:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 08:24:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 08:24:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 08:24:54] 
[2025-06-06 08:24:54] 2025-06-06 06:21:08,014 | INFO     | **************************************
[2025-06-06 08:24:54] 2025-06-06 06:21:08,517 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-06-06 08:24:54] 2025-06-06 06:21:08,532 | INFO     | sufficient remaining disk space (660878655488 B)
[2025-06-06 08:24:54] 2025-06-06 06:21:08,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 08:24:54] 2025-06-06 06:21:08,533 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 08:24:54] 2025-06-06 06:21:08,533 | INFO     | update_server=False
[2025-06-06 08:24:54] 2025-06-06 06:21:08,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 08:24:54] 2025-06-06 06:21:08,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:24:54] 2025-06-06 06:21:08,533 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 08:24:54] 2025-06-06 06:21:08,534 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 08:24:54] 2025-06-06 06:21:08,535 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 08:24:54] 2025-06-06 06:21:08,535 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 08:24:54] 2025-06-06 06:21:08,596 | INFO     | all payload control threads have been joined
[2025-06-06 08:24:54] 2025-06-06 06:21:08,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:24:54] 2025-06-06 06:21:08,929 | INFO     | aborting loop
[2025-06-06 08:24:54] 2025-06-06 06:21:09,163 | INFO     | all job control threads have been joined
[2025-06-06 08:24:54] 2025-06-06 06:21:09,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 08:24:54] 2025-06-06 06:21:09,400 | INFO     | all data control threads have been joined
[2025-06-06 08:24:54] 2025-06-06 06:21:09,538 | INFO     | [job] retrieve thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:09,539 | INFO     | [job] queue monitor thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:09,579 | INFO     | [payload] failed_post thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:09,602 | INFO     | [payload] control thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:09,836 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:09,934 | INFO     | [job] job monitor thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:10,118 | INFO     | [data] copytool_in thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:10,131 | INFO     | [payload] validate_post thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:10,140 | INFO     | [job] validate thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:10,169 | INFO     | [job] control thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:10,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 08:24:54] 2025-06-06 06:21:10,361 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:10,405 | INFO     | [data] control thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:10,685 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:10,845 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:11,310 | INFO     | [data] copytool_out thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:14,352 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 08:24:54] 2025-06-06 06:21:15,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23336347813696)>', '<ExcThread(monitor, started 23336109176576)>']
[2025-06-06 08:24:54] 2025-06-06 06:21:15,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 08:24:54] 2025-06-06 06:21:15,570 | INFO     | [monitor] control thread has ended
[2025-06-06 08:24:54] 2025-06-06 06:21:20,066 | INFO     | all workflow threads have been joined
[2025-06-06 08:24:54] 2025-06-06 06:21:20,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 08:24:54] 2025-06-06 06:21:20,067 | INFO     | traces error code: 0
[2025-06-06 08:24:54] 2025-06-06 06:21:20,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 08:24:54] 2025-06-06 06:21:20,233 [wrapper] ==== pilot stdout END ====
[2025-06-06 08:24:54] 2025-06-06 06:21:20,236 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 08:24:54] 2025-06-06 06:21:20,239 [wrapper] pilotpid: 1098569
[2025-06-06 08:24:54] 2025-06-06 06:21:20,242 [wrapper] Pilot exit status: 0
[2025-06-06 08:24:54] 2025-06-06 06:21:20,252 [wrapper] pandaids: 6679367318
[2025-06-06 08:24:54] 2025-06-06 06:21:20,316 [wrapper] cleanup supervisor_pilot 1323168 1098570
[2025-06-06 08:24:54] 2025-06-06 06:21:20,319 [wrapper] Test setup, not cleaning
[2025-06-06 08:24:54] 2025-06-06 06:21:20,321 [wrapper] apfmon messages muted
[2025-06-06 08:24:54] 2025-06-06 06:21:20,324 [wrapper] ==== wrapper stdout END ====
[2025-06-06 08:24:54] 2025-06-06 06:21:20,326 [wrapper] ==== wrapper stderr END ====
[2025-06-06 08:24:54]  *** Error codes and diagnostics ***
[2025-06-06 08:24:54]     "exeErrorCode": 0,
[2025-06-06 08:24:54]     "exeErrorDiag": "",
[2025-06-06 08:24:54]     "pilotErrorCode": 0,
[2025-06-06 08:24:54]     "pilotErrorDiag": "",
[2025-06-06 08:24:54]  *** Listing of results directory ***
[2025-06-06 08:24:54] total 387816
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:58 queuedata.json
[2025-06-06 08:24:54] -rwx------ 1 boinc boinc     37140 Jun  4 10:58 runpilot2-wrapper.sh
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc       100 Jun  6 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 08:24:54] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 06:04 run_atlas
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc       105 Jun  6 06:04 job.xml
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc      6635 Jun  6 06:04 init_data.xml
[2025-06-06 08:24:54] -rw-r--r-- 2 boinc boinc 214893845 Jun  6 06:04 EVNT.45006593._001338.pool.root.1
[2025-06-06 08:24:54] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:04 start_atlas.sh
[2025-06-06 08:24:54] drwxrwx--x 2 boinc boinc      4096 Jun  6 06:04 shared
[2025-06-06 08:24:54] -rw-r--r-- 2 boinc boinc    508879 Jun  6 06:04 input.tar.gz
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc         0 Jun  6 06:04 boinc_lockfile
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc      2522 Jun  6 06:04 pandaJob.out
[2025-06-06 08:24:54] -rw------- 1 boinc boinc    987721 Jun  6 06:04 agis_schedconf.cvmfs.json
[2025-06-06 08:24:54] -rw------- 1 boinc boinc   1598969 Jun  6 06:04 agis_ddmendpoints.agis.ALL.json
[2025-06-06 08:24:54] drwx------ 4 boinc boinc      4096 Jun  6 06:04 pilot3
[2025-06-06 08:24:54] -rw------- 1 boinc boinc 176303043 Jun  6 08:20 HITS.45006595._056194.pool.root.1
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc       528 Jun  6 08:20 boinc_task_state.xml
[2025-06-06 08:24:54] -rw------- 1 boinc boinc        95 Jun  6 08:20 pilot_heartbeat.json
[2025-06-06 08:24:54] -rw------- 1 boinc boinc      1046 Jun  6 08:20 memory_monitor_summary.json
[2025-06-06 08:24:54] -rw------- 1 boinc boinc    263237 Jun  6 08:20 log.45006595._056194.job.log.tgz.1
[2025-06-06 08:24:54] -rw------- 1 boinc boinc      7719 Jun  6 08:21 heartbeat.json
[2025-06-06 08:24:54] -rw------- 1 boinc boinc      4486 Jun  6 08:21 pilotlog.txt
[2025-06-06 08:24:54] -rw------- 1 boinc boinc    779972 Jun  6 08:21 log.45006595._056194.job.log.1
[2025-06-06 08:24:54] -rw------- 1 boinc boinc       357 Jun  6 08:21 output.list
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc       620 Jun  6 08:21 runtime_log
[2025-06-06 08:24:54] -rw------- 1 boinc boinc   1064960 Jun  6 08:21 result.tar.gz
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc      9025 Jun  6 08:21 runtime_log.err
[2025-06-06 08:24:54] -rw------- 1 boinc boinc       662 Jun  6 08:21 TWWNDm17yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxtnKDm8d4lkm.diag
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc        26 Jun  6 08:24 wrapper_checkpoint.txt
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc      8192 Jun  6 08:24 boinc_mmap_file
[2025-06-06 08:24:54] -rw-r--r-- 1 boinc boinc     20641 Jun  6 08:24 stderr.txt
[2025-06-06 08:24:54] HITS file was successfully produced:
[2025-06-06 08:24:54] -rw------- 1 boinc boinc 176303043 Jun  6 08:20 shared/HITS.pool.root.1
[2025-06-06 08:24:54]  *** Contents of shared directory: ***
[2025-06-06 08:24:54] total 383596
[2025-06-06 08:24:54] -rw-r--r-- 2 boinc boinc 214893845 Jun  6 06:04 ATLAS.root_0
[2025-06-06 08:24:54] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:04 start_atlas.sh
[2025-06-06 08:24:54] -rw-r--r-- 2 boinc boinc    508879 Jun  6 06:04 input.tar.gz
[2025-06-06 08:24:54] -rw------- 1 boinc boinc 176303043 Jun  6 08:20 HITS.pool.root.1
[2025-06-06 08:24:54] -rw------- 1 boinc boinc   1064960 Jun  6 08:21 result.tar.gz
08:24:56 (1094856): run_atlas exited; CPU time 31246.114716
08:24:56 (1094856): called boinc_finish(0)

</stderr_txt>
]]>

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