Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:45:21 (2086277): wrapper (7.7.26015): starting
23:45:21 (2086277): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 23:45:21] Arguments: --nthreads 3
[2025-06-04 23:45:21] Threads: 3
[2025-06-04 23:45:21] Checking for CVMFS
[2025-06-04 23:45:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:45:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:45:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:45:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:45:21] 2.9.2.0 1053229 3039 85328 146795 1 56 31689923 36864000 0 130560 0 2800545 99.992 756191 44663 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 23:45:21] CVMFS is ok
[2025-06-04 23:45:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:45:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:45:21] Further information can be found at the LHC@home message board.
[2025-06-04 23:45:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:45:21] Checking for apptainer binary...
[2025-06-04 23:45:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:45:21] Running /usr/bin/apptainer --version
[2025-06-04 23:45:21] apptainer version 1.3.6-6.1
[2025-06-04 23:45:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:45:21] thA357
[2025-06-04 23:45:21] apptainer works
[2025-06-04 23:45:21] Set ATHENA_PROC_NUMBER=3
[2025-06-04 23:45:21] Set ATHENA_CORE_NUMBER=3
[2025-06-04 23:45:21] Starting ATLAS job with PandaID=6679310800
[2025-06-04 23:45:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:58:09]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:58:09]  guid=1dccffed-57dc-42f9-ad3d-c08ebd6bc972
[2025-06-05 00:58:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 00:58:09]  is_altstaged=None
[2025-06-05 00:58:09]  is_tar=False
[2025-06-05 00:58:09]  lfn=log.45006595._056139.job.log.tgz.1
[2025-06-05 00:58:09]  mtime=0
[2025-06-05 00:58:09]  protocol_id=None
[2025-06-05 00:58:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 00:58:09]  replicas=None
[2025-06-05 00:58:09]  scope=mc23_13p6TeV
[2025-06-05 00:58:09]  status=None
[2025-06-05 00:58:09]  status_code=0
[2025-06-05 00:58:09]  storage_token=
[2025-06-05 00:58:09]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6679310800/log.45006595._056139.job.log.tgz.1
[2025-06-05 00:58:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/51/log.45006595._056139.job.log.tgz.1
[2025-06-05 00:58:09]  workdir=None
[2025-06-05 00:58:09] ]
[2025-06-05 00:58:09] 2025-06-04 22:57:45,520 | INFO     | transferring file log.45006595._056139.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6679310800/log.45006595._056139.job.log.tgz.1 to /local/data/boinc/
[2025-06-05 00:58:09] 2025-06-04 22:57:45,520 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6679310800/log.45006595._056139.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0561
[2025-06-05 00:58:09] 2025-06-04 22:57:45,535 | INFO     | adding to output.list: log.45006595._056139.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/51/log.45006595._056139.job.log.tg
[2025-06-05 00:58:09] 2025-06-04 22:57:45,535 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 00:58:09] 2025-06-04 22:57:45,535 | INFO     | summary of transferred files:
[2025-06-05 00:58:09] 2025-06-04 22:57:45,535 | INFO     |  -- lfn=log.45006595._056139.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 00:58:09] 2025-06-04 22:57:45,535 | INFO     | stage-out finished correctly
[2025-06-05 00:58:09] 2025-06-04 22:57:45,565 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 00:58:09] 2025-06-04 22:57:46,779 | INFO     | job 6679310800 has state=finished
[2025-06-05 00:58:09] 2025-06-04 22:57:46,779 | INFO     | preparing for final server update for job 6679310800 in state='finished'
[2025-06-05 00:58:09] 2025-06-04 22:57:46,779 | INFO     | this job has now completed (state=finished)
[2025-06-05 00:58:09] 2025-06-04 22:57:46,779 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 00:58:09] 2025-06-04 22:57:46,780 | INFO     | log transfer has been attempted: DONE
[2025-06-05 00:58:09] 2025-06-04 22:57:46,780 | INFO     | job 6679310800 has finished - writing final server update
[2025-06-05 00:58:09] 2025-06-04 22:57:46,780 | INFO     | total number of processed events: 400 (read)
[2025-06-05 00:58:09] 2025-06-04 22:57:46,781 | INFO     | executing command: lscpu
[2025-06-05 00:58:09] 2025-06-04 22:57:46,798 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 00:58:09] 2025-06-04 22:57:48,374 | WARNING  | process 2096408 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 00:58:09] 2025-06-04 22:57:48,374 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6679310800/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:58:09] 2025-06-04 22:57:48,429 | INFO     | number of running child processes to parent process 2096408: 1
[2025-06-05 00:58:09] 2025-06-04 22:57:48,429 | INFO     | maximum number of monitored processes: 6
[2025-06-05 00:58:09] 2025-06-04 22:57:48,790 | INFO     | 4343s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 00:58:09] 2025-06-04 22:57:50,361 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 00:58:09] 2025-06-04 22:57:50,361 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6679310800/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:58:09] 2025-06-04 22:57:50,362 | INFO     | extracted standard info from prmon json
[2025-06-05 00:58:09] 2025-06-04 22:57:50,362 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:58:09] 2025-06-04 22:57:50,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:58:09] 2025-06-04 22:57:50,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:58:09] 2025-06-04 22:57:50,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | sum of square deviations: 81266640.0
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | sum of deviations: -6735614998.0
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | mean x: 1749075773.5
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | mean y: 2427457.90625
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | -- intersect: 144970904223.09613
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | intersect: 144970904223.09613
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | chi2: 0.06297962051180553
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | -- intersect: 144970904223.09613
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | current memory leak: -82.88 B/s (using 64 data points, chi2=0.06)
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | ..............................
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | . Timing measurements:
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | . get job = 0 s
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | . initial setup = 1 s
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | . payload setup = 3 s
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | . stage-in = 0 s
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | . payload execution = 4318 s
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | . stage-out = 0 s
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | . log creation = 0 s
[2025-06-05 00:58:09] 2025-06-04 22:57:50,363 | INFO     | ..............................
[2025-06-05 00:58:09] 2025-06-04 22:57:50,393 | INFO     | 
[2025-06-05 00:58:09] 2025-06-04 22:57:50,393 | INFO     | job summary report
[2025-06-05 00:58:09] 2025-06-04 22:57:50,393 | INFO     | --------------------------------------------------
[2025-06-05 00:58:09] 2025-06-04 22:57:50,393 | INFO     | PanDA job id: 6679310800
[2025-06-05 00:58:09] 2025-06-04 22:57:50,393 | INFO     | task id: 45006595
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | errors: (none)
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | pilot state: finished 
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | transexitcode: 0
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | exeerrorcode: 0
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | exeerrordiag: 
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | exitcode: 0
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | exitmsg: OK
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | cpuconsumptiontime: 12373 s
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | nevents: 400
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | neventsw: 0
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | pid: 2096408
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | pgrp: 2096408
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | corecount: 3
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | event service: False
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | sizes: {0: 2397295, 3: 2397501, 11: 2397529, 4325: 2423632, 4326: 2432635, 4331: 2432749}
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | --------------------------------------------------
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | 
[2025-06-05 00:58:09] 2025-06-04 22:57:50,394 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 00:58:09] 2025-06-04 22:57:50,406 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,406 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,406 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,406 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,406 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | job 6679310800 has completed (purged errors)
[2025-06-05 00:58:09] 2025-06-04 22:57:50,407 | INFO     | overall cleanup function is called
[2025-06-05 00:58:09] 2025-06-04 22:57:51,413 | INFO     | --- collectZombieJob: --- 10, [2096408]
[2025-06-05 00:58:09] 2025-06-04 22:57:51,414 | INFO     | zombie collector waiting for pid 2096408
[2025-06-05 00:58:09] 2025-06-04 22:57:51,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:58:09] 2025-06-04 22:57:51,414 | INFO     | collected zombie processes
[2025-06-05 00:58:09] 2025-06-04 22:57:51,414 | INFO     | will attempt to kill all subprocesses of pid=2096408
[2025-06-05 00:58:09] 2025-06-04 22:57:51,455 | INFO     | process IDs to be killed: [2096408] (in reverse order)
[2025-06-05 00:58:09] 2025-06-04 22:57:51,481 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:58:09] 2025-06-04 22:57:51,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:58:09] 2025-06-04 22:57:51,483 | INFO     | did not find any defunct processes belonging to 2096408
[2025-06-05 00:58:09] 2025-06-04 22:57:51,484 | INFO     | did not find any defunct processes belonging to 2096408
[2025-06-05 00:58:09] 2025-06-04 22:57:51,484 | INFO     | ready for new job
[2025-06-05 00:58:09] 2025-06-04 22:57:51,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:58:09] 2025-06-04 22:57:51,484 | INFO     | **************************************
[2025-06-05 00:58:09] 2025-06-04 22:57:51,484 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:58:09] 2025-06-04 22:57:51,484 | INFO     | **************************************
[2025-06-05 00:58:09] 2025-06-04 22:57:51,484 | INFO     | 
[2025-06-05 00:58:09] 2025-06-04 22:57:51,485 | INFO     | architecture information:
[2025-06-05 00:58:09] 2025-06-04 22:57:51,485 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:58:09] 2025-06-04 22:57:51,494 | INFO     | cat /etc/os-release:
[2025-06-05 00:58:09] NAME="CentOS Linux"
[2025-06-05 00:58:09] VERSION="7 (Core)"
[2025-06-05 00:58:09] ID="centos"
[2025-06-05 00:58:09] ID_LIKE="rhel fedora"
[2025-06-05 00:58:09] VERSION_ID="7"
[2025-06-05 00:58:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:58:09] ANSI_COLOR="0;31"
[2025-06-05 00:58:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:58:09] HOME_URL="https://www.centos.org/"
[2025-06-05 00:58:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:58:09] 
[2025-06-05 00:58:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:58:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:58:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:58:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:58:09] 
[2025-06-05 00:58:09] 2025-06-04 22:57:51,494 | INFO     | **************************************
[2025-06-05 00:58:09] 2025-06-04 22:57:51,998 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 00:58:09] 2025-06-04 22:57:52,012 | INFO     | sufficient remaining disk space (269793361920 B)
[2025-06-05 00:58:09] 2025-06-04 22:57:52,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:58:09] 2025-06-04 22:57:52,012 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:58:09] 2025-06-04 22:57:52,012 | INFO     | update_server=False
[2025-06-05 00:58:09] 2025-06-04 22:57:52,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:58:09] 2025-06-04 22:57:52,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:58:09] 2025-06-04 22:57:52,012 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 00:58:09] 2025-06-04 22:57:52,013 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:58:09] 2025-06-04 22:57:52,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:58:09] 2025-06-04 22:57:52,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:58:09] 2025-06-04 22:57:52,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:58:09] 2025-06-04 22:57:52,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:58:09] 2025-06-04 22:57:52,013 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:58:09] 2025-06-04 22:57:52,013 | INFO     | aborting loop
[2025-06-05 00:58:09] 2025-06-04 22:57:52,298 | INFO     | all job control threads have been joined
[2025-06-05 00:58:09] 2025-06-04 22:57:52,302 | INFO     | all payload control threads have been joined
[2025-06-05 00:58:09] 2025-06-04 22:57:52,607 | INFO     | all data control threads have been joined
[2025-06-05 00:58:09] 2025-06-04 22:57:53,018 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:53,018 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:53,018 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:53,222 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:53,304 | INFO     | [job] control thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:53,308 | INFO     | [payload] control thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:53,531 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:53,546 | INFO     | [job] validate thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:53,613 | INFO     | [data] control thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:53,685 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:53,686 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:53,740 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:54,018 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:54,272 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:57:56,020 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:58:02,846 | INFO     | job.realtimelogging is not enabled
[2025-06-05 00:58:09] 2025-06-04 22:58:03,852 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:58:09] 2025-06-04 22:58:04,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140164794529600)>', '<ExcThread(monitor, started 140164168935168)>']
[2025-06-05 00:58:09] 2025-06-04 22:58:05,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:58:09] 2025-06-04 22:58:05,082 | INFO     | [monitor] control thread has ended
[2025-06-05 00:58:09] 2025-06-04 22:58:09,144 | INFO     | all workflow threads have been joined
[2025-06-05 00:58:09] 2025-06-04 22:58:09,145 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:58:09] 2025-06-04 22:58:09,145 | INFO     | traces error code: 0
[2025-06-05 00:58:09] 2025-06-04 22:58:09,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:58:09] 2025-06-04 22:58:09,196 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:58:09] 2025-06-04 22:58:09,198 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:58:09] 2025-06-04 22:58:09,201 [wrapper] pilotpid: 2089912
[2025-06-05 00:58:09] 2025-06-04 22:58:09,204 [wrapper] Pilot exit status: 0
[2025-06-05 00:58:09] 2025-06-04 22:58:09,211 [wrapper] pandaids: 6679310800
[2025-06-05 00:58:09] 2025-06-04 22:58:09,228 [wrapper] cleanup supervisor_pilot 2106131 2089913
[2025-06-05 00:58:09] 2025-06-04 22:58:09,230 [wrapper] Test setup, not cleaning
[2025-06-05 00:58:09] 2025-06-04 22:58:09,233 [wrapper] apfmon messages muted
[2025-06-05 00:58:09] 2025-06-04 22:58:09,235 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:58:09] 2025-06-04 22:58:09,238 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:58:09]  *** Error codes and diagnostics ***
[2025-06-05 00:58:09]     "exeErrorCode": 0,
[2025-06-05 00:58:09]     "exeErrorDiag": "",
[2025-06-05 00:58:09]     "pilotErrorCode": 0,
[2025-06-05 00:58:09]     "pilotErrorDiag": "",
[2025-06-05 00:58:09]  *** Listing of results directory ***
[2025-06-05 00:58:09] total 392248
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:56 queuedata.json
[2025-06-05 00:58:09] -rwx------ 1 boinc boinc     37140 Jun  4 10:57 runpilot2-wrapper.sh
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc       100 Jun  4 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:58:09] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 23:45 run_atlas
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc       105 Jun  4 23:45 job.xml
[2025-06-05 00:58:09] -rw-r--r-- 2 boinc boinc 215624659 Jun  4 23:45 EVNT.45006593._001594.pool.root.1
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc      6929 Jun  4 23:45 init_data.xml
[2025-06-05 00:58:09] drwxrwx--x 2 boinc boinc      4096 Jun  4 23:45 shared
[2025-06-05 00:58:09] -rw-r--r-- 2 boinc boinc    508886 Jun  4 23:45 input.tar.gz
[2025-06-05 00:58:09] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:45 start_atlas.sh
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc         0 Jun  4 23:45 boinc_lockfile
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc      2525 Jun  4 23:45 pandaJob.out
[2025-06-05 00:58:09] -rw------- 1 boinc boinc    987032 Jun  4 23:45 agis_schedconf.cvmfs.json
[2025-06-05 00:58:09] -rw------- 1 boinc boinc   1598969 Jun  4 23:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:58:09] drwx------ 4 boinc boinc      4096 Jun  4 23:45 pilot3
[2025-06-05 00:58:09] -rw------- 1 boinc boinc 180906040 Jun  5 00:57 HITS.45006595._056139.pool.root.1
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc       529 Jun  5 00:57 boinc_task_state.xml
[2025-06-05 00:58:09] -rw------- 1 boinc boinc      1026 Jun  5 00:57 memory_monitor_summary.json
[2025-06-05 00:58:09] -rw------- 1 boinc boinc    222345 Jun  5 00:57 log.45006595._056139.job.log.tgz.1
[2025-06-05 00:58:09] -rw------- 1 boinc boinc        95 Jun  5 00:57 pilot_heartbeat.json
[2025-06-05 00:58:09] -rw------- 1 boinc boinc      7644 Jun  5 00:57 heartbeat.json
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc        27 Jun  5 00:57 wrapper_checkpoint.txt
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc      8192 Jun  5 00:57 boinc_mmap_file
[2025-06-05 00:58:09] -rw------- 1 boinc boinc      4552 Jun  5 00:58 pilotlog.txt
[2025-06-05 00:58:09] -rw------- 1 boinc boinc    428937 Jun  5 00:58 log.45006595._056139.job.log.1
[2025-06-05 00:58:09] -rw------- 1 boinc boinc       357 Jun  5 00:58 output.list
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc       620 Jun  5 00:58 runtime_log
[2025-06-05 00:58:09] -rw------- 1 boinc boinc    665600 Jun  5 00:58 result.tar.gz
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc      8733 Jun  5 00:58 runtime_log.err
[2025-06-05 00:58:09] -rw------- 1 boinc boinc       658 Jun  5 00:58 GsPNDmU7yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3snKDm8clgDn.diag
[2025-06-05 00:58:09] -rw-r--r-- 1 boinc boinc     21278 Jun  5 00:58 stderr.txt
[2025-06-05 00:58:09] HITS file was successfully produced:
[2025-06-05 00:58:09] -rw------- 1 boinc boinc 180906040 Jun  5 00:57 shared/HITS.pool.root.1
[2025-06-05 00:58:09]  *** Contents of shared directory: ***
[2025-06-05 00:58:09] total 388416
[2025-06-05 00:58:09] -rw-r--r-- 2 boinc boinc 215624659 Jun  4 23:45 ATLAS.root_0
[2025-06-05 00:58:09] -rw-r--r-- 2 boinc boinc    508886 Jun  4 23:45 input.tar.gz
[2025-06-05 00:58:09] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:45 start_atlas.sh
[2025-06-05 00:58:09] -rw------- 1 boinc boinc 180906040 Jun  5 00:57 HITS.pool.root.1
[2025-06-05 00:58:09] -rw------- 1 boinc boinc    665600 Jun  5 00:58 result.tar.gz
00:58:10 (2086277): run_atlas exited; CPU time 12384.770196
00:58:10 (2086277): called boinc_finish(0)

</stderr_txt>
]]>

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