Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:09:15 (2608056): wrapper (7.7.26015): starting
09:09:15 (2608056): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:09:15] Arguments: --nthreads 8
[2025-06-04 09:09:15] Threads: 8
[2025-06-04 09:09:15] Checking for CVMFS
[2025-06-04 09:09:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:09:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:09:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:09:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:09:16] 2.12.6.0 2443832 23569 546968 146780 1 451 32381297 32935937 12537 16776704 0 140602463 99.645 125969813 26105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:09:16] CVMFS is ok
[2025-06-04 09:09:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:09:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:09:16] Further information can be found at the LHC@home message board.
[2025-06-04 09:09:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:09:16] Checking for apptainer binary...
[2025-06-04 09:09:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:09:16] Running /usr/bin/apptainer --version
[2025-06-04 09:09:16] apptainer version 1.4.1-1.el9
[2025-06-04 09:09:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:09:16] c6-12-29-1.aglt2.org
[2025-06-04 09:09:16] apptainer works
[2025-06-04 09:09:16] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:09:16] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:09:16] Starting ATLAS job with PandaID=6679247394
[2025-06-04 09:09:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:09:57]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:09:57]  guid=7de8b617-c06c-46f5-b90f-31cf019426c6
[2025-06-04 10:09:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:09:57]  is_altstaged=None
[2025-06-04 10:09:57]  is_tar=False
[2025-06-04 10:09:57]  lfn=log.45006595._056054.job.log.tgz.1
[2025-06-04 10:09:57]  mtime=0
[2025-06-04 10:09:57]  protocol_id=None
[2025-06-04 10:09:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:09:57]  replicas=None
[2025-06-04 10:09:57]  scope=mc23_13p6TeV
[2025-06-04 10:09:57]  status=None
[2025-06-04 10:09:57]  status_code=0
[2025-06-04 10:09:57]  storage_token=
[2025-06-04 10:09:57]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6679247394/log.45006595._056054.job.log.tgz.1
[2025-06-04 10:09:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/6f/log.45006595._056054.job.log.tgz.1
[2025-06-04 10:09:57]  workdir=None
[2025-06-04 10:09:57] ]
[2025-06-04 10:09:57] 2025-06-04 14:09:36,007 | INFO     | transferring file log.45006595._056054.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6679247394/log.45006595._056054.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:09:57] 2025-06-04 14:09:36,007 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6679247394/log.45006595._056054.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._056054.job
[2025-06-04 10:09:57] 2025-06-04 14:09:36,027 | INFO     | adding to output.list: log.45006595._056054.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/6f/log.45006595._056054.job.log.tg
[2025-06-04 10:09:57] 2025-06-04 14:09:36,028 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:09:57] 2025-06-04 14:09:36,028 | INFO     | summary of transferred files:
[2025-06-04 10:09:57] 2025-06-04 14:09:36,028 | INFO     |  -- lfn=log.45006595._056054.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:09:57] 2025-06-04 14:09:36,029 | INFO     | stage-out finished correctly
[2025-06-04 10:09:57] 2025-06-04 14:09:36,556 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:09:57] 2025-06-04 14:09:37,303 | INFO     | monitor loop #270: job 0:6679247394 is in state 'finished'
[2025-06-04 10:09:57] 2025-06-04 14:09:37,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:09:57] 2025-06-04 14:09:38,684 | INFO     | job 6679247394 has state=finished
[2025-06-04 10:09:57] 2025-06-04 14:09:38,684 | INFO     | preparing for final server update for job 6679247394 in state='finished'
[2025-06-04 10:09:57] 2025-06-04 14:09:38,686 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:09:57] 2025-06-04 14:09:38,686 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:09:57] 2025-06-04 14:09:38,686 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:09:57] 2025-06-04 14:09:38,686 | INFO     | job 6679247394 has finished - writing final server update
[2025-06-04 10:09:57] 2025-06-04 14:09:38,686 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:09:57] 2025-06-04 14:09:38,703 | INFO     | executing command: lscpu
[2025-06-04 10:09:57] 2025-06-04 14:09:38,769 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:09:57] 2025-06-04 14:09:39,807 | INFO     | monitor loop #271: job 0:6679247394 is in state 'finished'
[2025-06-04 10:09:57] 2025-06-04 14:09:39,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:09:57] 2025-06-04 14:09:42,310 | INFO     | monitor loop #272: job 0:6679247394 is in state 'finished'
[2025-06-04 10:09:57] 2025-06-04 14:09:42,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:09:57] 2025-06-04 14:09:43,047 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:09:57] 2025-06-04 14:09:43,048 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679247394/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:09:57] 2025-06-04 14:09:43,049 | INFO     | extracted standard info from prmon json
[2025-06-04 10:09:57] 2025-06-04 14:09:43,049 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:09:57] 2025-06-04 14:09:43,049 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:09:57] 2025-06-04 14:09:43,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:09:57] 2025-06-04 14:09:43,049 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:09:57] 2025-06-04 14:09:43,051 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:09:57] 2025-06-04 14:09:43,051 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 10:09:57] 2025-06-04 14:09:43,051 | INFO     | sum of deviations: 5880630915.499999
[2025-06-04 10:09:57] 2025-06-04 14:09:43,051 | INFO     | mean x: 1749044456.5
[2025-06-04 10:09:57] 2025-06-04 14:09:43,051 | INFO     | mean y: 2164403.2115384615
[2025-06-04 10:09:57] 2025-06-04 14:09:43,051 | INFO     | -- intersect: -235989660029.48413
[2025-06-04 10:09:57] 2025-06-04 14:09:43,051 | INFO     | intersect: -235989660029.48413
[2025-06-04 10:09:57] 2025-06-04 14:09:43,052 | INFO     | chi2: 0.6764700974917676
[2025-06-04 10:09:57] 2025-06-04 14:09:43,052 | INFO     | -- intersect: -235989660029.48413
[2025-06-04 10:09:57] 2025-06-04 14:09:43,052 | INFO     | current memory leak: 134.93 B/s (using 52 data points, chi2=0.68)
[2025-06-04 10:09:57] 2025-06-04 14:09:43,052 | INFO     | ..............................
[2025-06-04 10:09:57] 2025-06-04 14:09:43,052 | INFO     | . Timing measurements:
[2025-06-04 10:09:57] 2025-06-04 14:09:43,052 | INFO     | . get job = 0 s
[2025-06-04 10:09:57] 2025-06-04 14:09:43,052 | INFO     | . initial setup = 2 s
[2025-06-04 10:09:57] 2025-06-04 14:09:43,052 | INFO     | . payload setup = 7 s
[2025-06-04 10:09:57] 2025-06-04 14:09:43,052 | INFO     | . stage-in = 0 s
[2025-06-04 10:09:57] 2025-06-04 14:09:43,053 | INFO     | . payload execution = 3581 s
[2025-06-04 10:09:57] 2025-06-04 14:09:43,053 | INFO     | . stage-out = 0 s
[2025-06-04 10:09:57] 2025-06-04 14:09:43,053 | INFO     | . log creation = 0 s
[2025-06-04 10:09:57] 2025-06-04 14:09:43,053 | INFO     | ..............................
[2025-06-04 10:09:57] 2025-06-04 14:09:43,139 | INFO     | 
[2025-06-04 10:09:57] 2025-06-04 14:09:43,140 | INFO     | job summary report
[2025-06-04 10:09:57] 2025-06-04 14:09:43,140 | INFO     | --------------------------------------------------
[2025-06-04 10:09:57] 2025-06-04 14:09:43,140 | INFO     | PanDA job id: 6679247394
[2025-06-04 10:09:57] 2025-06-04 14:09:43,140 | INFO     | task id: 45006595
[2025-06-04 10:09:57] 2025-06-04 14:09:43,140 | INFO     | errors: (none)
[2025-06-04 10:09:57] 2025-06-04 14:09:43,140 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:09:57] 2025-06-04 14:09:43,140 | INFO     | pilot state: finished 
[2025-06-04 10:09:57] 2025-06-04 14:09:43,141 | INFO     | transexitcode: 0
[2025-06-04 10:09:57] 2025-06-04 14:09:43,141 | INFO     | exeerrorcode: 0
[2025-06-04 10:09:57] 2025-06-04 14:09:43,141 | INFO     | exeerrordiag: 
[2025-06-04 10:09:57] 2025-06-04 14:09:43,141 | INFO     | exitcode: 0
[2025-06-04 10:09:57] 2025-06-04 14:09:43,141 | INFO     | exitmsg: OK
[2025-06-04 10:09:57] 2025-06-04 14:09:43,141 | INFO     | cpuconsumptiontime: 23953 s
[2025-06-04 10:09:57] 2025-06-04 14:09:43,141 | INFO     | nevents: 400
[2025-06-04 10:09:57] 2025-06-04 14:09:43,141 | INFO     | neventsw: 0
[2025-06-04 10:09:57] 2025-06-04 14:09:43,141 | INFO     | pid: 2620241
[2025-06-04 10:09:57] 2025-06-04 14:09:43,142 | INFO     | pgrp: 2620241
[2025-06-04 10:09:57] 2025-06-04 14:09:43,142 | INFO     | corecount: 8
[2025-06-04 10:09:57] 2025-06-04 14:09:43,142 | INFO     | event service: False
[2025-06-04 10:09:57] 2025-06-04 14:09:43,142 | INFO     | sizes: {0: 2397121, 1: 2397320, 5: 2397526, 11: 2397582, 3592: 2423267, 3593: 2432392, 3600: 2432506}
[2025-06-04 10:09:57] 2025-06-04 14:09:43,142 | INFO     | --------------------------------------------------
[2025-06-04 10:09:57] 2025-06-04 14:09:43,142 | INFO     | 
[2025-06-04 10:09:57] 2025-06-04 14:09:43,142 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:09:57] 2025-06-04 14:09:43,164 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,165 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,167 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:09:57] 2025-06-04 14:09:43,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:09:57] 2025-06-04 14:09:43,167 | INFO     | job 6679247394 has completed (purged errors)
[2025-06-04 10:09:57] 2025-06-04 14:09:43,168 | INFO     | overall cleanup function is called
[2025-06-04 10:09:57] 2025-06-04 14:09:44,176 | INFO     | --- collectZombieJob: --- 10, [2620241]
[2025-06-04 10:09:57] 2025-06-04 14:09:44,177 | INFO     | zombie collector waiting for pid 2620241
[2025-06-04 10:09:57] 2025-06-04 14:09:44,177 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:09:57] 2025-06-04 14:09:44,177 | INFO     | collected zombie processes
[2025-06-04 10:09:57] 2025-06-04 14:09:44,177 | INFO     | will attempt to kill all subprocesses of pid=2620241
[2025-06-04 10:09:57] 2025-06-04 14:09:44,378 | INFO     | process IDs to be killed: [2620241] (in reverse order)
[2025-06-04 10:09:57] 2025-06-04 14:09:44,452 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:09:57] 2025-06-04 14:09:44,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:09:57] 2025-06-04 14:09:44,468 | INFO     | did not find any defunct processes belonging to 2620241
[2025-06-04 10:09:57] 2025-06-04 14:09:44,478 | INFO     | did not find any defunct processes belonging to 2620241
[2025-06-04 10:09:57] 2025-06-04 14:09:44,478 | INFO     | ready for new job
[2025-06-04 10:09:57] 2025-06-04 14:09:44,478 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:09:57] 2025-06-04 14:09:44,480 | INFO     | **************************************
[2025-06-04 10:09:57] 2025-06-04 14:09:44,481 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:09:57] 2025-06-04 14:09:44,481 | INFO     | **************************************
[2025-06-04 10:09:57] 2025-06-04 14:09:44,481 | INFO     | 
[2025-06-04 10:09:57] 2025-06-04 14:09:44,501 | INFO     | architecture information:
[2025-06-04 10:09:57] 2025-06-04 14:09:44,502 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:09:57] 2025-06-04 14:09:44,519 | INFO     | cat /etc/os-release:
[2025-06-04 10:09:57] NAME="CentOS Linux"
[2025-06-04 10:09:57] VERSION="7 (Core)"
[2025-06-04 10:09:57] ID="centos"
[2025-06-04 10:09:57] ID_LIKE="rhel fedora"
[2025-06-04 10:09:57] VERSION_ID="7"
[2025-06-04 10:09:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:09:57] ANSI_COLOR="0;31"
[2025-06-04 10:09:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:09:57] HOME_URL="https://www.centos.org/"
[2025-06-04 10:09:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:09:57] 
[2025-06-04 10:09:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:09:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:09:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:09:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:09:57] 
[2025-06-04 10:09:57] 2025-06-04 14:09:44,519 | INFO     | **************************************
[2025-06-04 10:09:57] 2025-06-04 14:09:45,022 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:09:57] 2025-06-04 14:09:45,039 | INFO     | sufficient remaining disk space (95409930240 B)
[2025-06-04 10:09:57] 2025-06-04 14:09:45,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:09:57] 2025-06-04 14:09:45,040 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:09:57] 2025-06-04 14:09:45,040 | INFO     | update_server=False
[2025-06-04 10:09:57] 2025-06-04 14:09:45,041 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:09:57] 2025-06-04 14:09:45,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:09:57] 2025-06-04 14:09:45,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:09:57] 2025-06-04 14:09:45,041 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:09:57] 2025-06-04 14:09:45,042 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:09:57] 2025-06-04 14:09:45,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:09:57] 2025-06-04 14:09:45,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:09:57] 2025-06-04 14:09:45,311 | INFO     | all data control threads have been joined
[2025-06-04 10:09:57] 2025-06-04 14:09:45,742 | INFO     | all payload control threads have been joined
[2025-06-04 10:09:57] 2025-06-04 14:09:45,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:09:57] 2025-06-04 14:09:45,819 | INFO     | aborting loop
[2025-06-04 10:09:57] 2025-06-04 14:09:46,042 | INFO     | all job control threads have been joined
[2025-06-04 10:09:57] 2025-06-04 14:09:46,046 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:46,047 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:46,133 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:46,270 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:46,316 | INFO     | [data] control thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:46,747 | INFO     | [payload] control thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:46,824 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:46,979 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:47,004 | INFO     | [job] validate thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:47,047 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:47,048 | INFO     | [job] control thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:47,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:09:57] 2025-06-04 14:09:47,174 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:47,240 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:47,406 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:47,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:51,130 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:09:57] 2025-06-04 14:09:52,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687004583744)>', '<ExcThread(monitor, started 140686653372160)>']
[2025-06-04 10:09:57] 2025-06-04 14:09:53,079 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:09:57] 2025-06-04 14:09:53,079 | INFO     | [monitor] control thread has ended
[2025-06-04 10:09:57] 2025-06-04 14:09:57,595 | INFO     | all workflow threads have been joined
[2025-06-04 10:09:57] 2025-06-04 14:09:57,596 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:09:57] 2025-06-04 14:09:57,596 | INFO     | traces error code: 0
[2025-06-04 10:09:57] 2025-06-04 14:09:57,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:09:57] 2025-06-04 14:09:57,738 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:09:57] 2025-06-04 14:09:57,742 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:09:57] 2025-06-04 14:09:57,745 [wrapper] pilotpid: 2611667
[2025-06-04 10:09:57] 2025-06-04 14:09:57,748 [wrapper] Pilot exit status: 0
[2025-06-04 10:09:57] 2025-06-04 14:09:57,760 [wrapper] pandaids: 6679247394
[2025-06-04 10:09:57] 2025-06-04 14:09:57,814 [wrapper] cleanup supervisor_pilot 2774865 2611668
[2025-06-04 10:09:57] 2025-06-04 14:09:57,817 [wrapper] Test setup, not cleaning
[2025-06-04 10:09:57] 2025-06-04 14:09:57,820 [wrapper] apfmon messages muted
[2025-06-04 10:09:57] 2025-06-04 14:09:57,822 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:09:57] 2025-06-04 14:09:57,825 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:09:57]  *** Error codes and diagnostics ***
[2025-06-04 10:09:57]     "exeErrorCode": 0,
[2025-06-04 10:09:57]     "exeErrorDiag": "",
[2025-06-04 10:09:57]     "pilotErrorCode": 0,
[2025-06-04 10:09:57]     "pilotErrorDiag": "",
[2025-06-04 10:09:57]  *** Listing of results directory ***
[2025-06-04 10:09:57] total 381804
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:58 queuedata.json
[2025-06-04 10:09:57] -rwx------. 1 boincer umatlas     37140 Jun  4 04:59 runpilot2-wrapper.sh
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:09:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:09 run_atlas
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:09 job.xml
[2025-06-04 10:09:57] -rw-r--r--. 2 boincer umatlas 213821394 Jun  4 09:09 EVNT.45006593._001644.pool.root.1
[2025-06-04 10:09:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:09 start_atlas.sh
[2025-06-04 10:09:57] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:09 shared
[2025-06-04 10:09:57] -rw-r--r--. 2 boincer umatlas    508891 Jun  4 09:09 input.tar.gz
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:09 boinc_lockfile
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 09:09 pandaJob.out
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas    986811 Jun  4 09:09 agis_schedconf.cvmfs.json
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:09:57] drwx------. 4 boincer umatlas      4096 Jun  4 09:09 pilot3
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas      6858 Jun  4 10:04 init_data.xml
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas        95 Jun  4 10:08 pilot_heartbeat.json
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:09 boinc_task_state.xml
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas 172005756 Jun  4 10:09 HITS.45006595._056054.pool.root.1
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas      1032 Jun  4 10:09 memory_monitor_summary.json
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas    286599 Jun  4 10:09 log.45006595._056054.job.log.tgz.1
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas      7716 Jun  4 10:09 heartbeat.json
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:09 boinc_mmap_file
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:09 wrapper_checkpoint.txt
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas      4476 Jun  4 10:09 pilotlog.txt
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas    365457 Jun  4 10:09 log.45006595._056054.job.log.1
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas       357 Jun  4 10:09 output.list
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:09 runtime_log
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas    675840 Jun  4 10:09 result.tar.gz
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 10:09 runtime_log.err
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas       653 Jun  4 10:09 MnzMDmz8yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3tnKDmDSpvkn.diag
[2025-06-04 10:09:57] -rw-r--r--. 1 boincer umatlas     21341 Jun  4 10:09 stderr.txt
[2025-06-04 10:09:57] HITS file was successfully produced:
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas 172005756 Jun  4 10:09 shared/HITS.pool.root.1
[2025-06-04 10:09:57]  *** Contents of shared directory: ***
[2025-06-04 10:09:57] total 377972
[2025-06-04 10:09:57] -rw-r--r--. 2 boincer umatlas 213821394 Jun  4 09:09 ATLAS.root_0
[2025-06-04 10:09:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:09 start_atlas.sh
[2025-06-04 10:09:57] -rw-r--r--. 2 boincer umatlas    508891 Jun  4 09:09 input.tar.gz
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas 172005756 Jun  4 10:09 HITS.pool.root.1
[2025-06-04 10:09:57] -rw-------. 1 boincer umatlas    675840 Jun  4 10:09 result.tar.gz
10:09:59 (2608056): run_atlas exited; CPU time 24069.809010
10:09:59 (2608056): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN