Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:53:27 (903274): wrapper (7.7.26015): starting
09:53:27 (903274): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:53:27] Arguments: --nthreads 12
[2025-06-04 09:53:27] Threads: 12
[2025-06-04 09:53:27] Checking for CVMFS
[2025-06-04 09:53:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:53:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:53:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:53:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:53:28] 2.12.6.0 5559 1420 137460 146781 0 66 30964525 40960001 6147 16776704 0 9529549 99.870 2619361 39447 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:53:28] CVMFS is ok
[2025-06-04 09:53:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:53:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:53:28] Further information can be found at the LHC@home message board.
[2025-06-04 09:53:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:53:28] Checking for apptainer binary...
[2025-06-04 09:53:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:53:28] Running /usr/bin/apptainer --version
[2025-06-04 09:53:28] apptainer version 1.4.1-1.el9
[2025-06-04 09:53:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:53:28] c6-8-12-3.aglt2.org
[2025-06-04 09:53:28] apptainer works
[2025-06-04 09:53:28] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:53:28] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:53:28] Starting ATLAS job with PandaID=6679371094
[2025-06-04 09:53:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:40:02]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:40:02]  lfn=log.45006595._056220.job.log.tgz.1
[2025-06-04 10:40:02]  mtime=0
[2025-06-04 10:40:02]  protocol_id=None
[2025-06-04 10:40:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:40:02]  replicas=None
[2025-06-04 10:40:02]  scope=mc23_13p6TeV
[2025-06-04 10:40:02]  status=None
[2025-06-04 10:40:02]  status_code=0
[2025-06-04 10:40:02]  storage_token=
[2025-06-04 10:40:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679371094/log.45006595._056220.job.log.tgz.1
[2025-06-04 10:40:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/24/log.45006595._056220.job.log.tgz.1
[2025-06-04 10:40:02]  workdir=None
[2025-06-04 10:40:02] ]
[2025-06-04 10:40:02] 2025-06-04 14:39:42,785 | INFO     | transferring file log.45006595._056220.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679371094/log.45006595._056220.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:40:02] 2025-06-04 14:39:42,785 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679371094/log.45006595._056220.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056220.job
[2025-06-04 10:40:02] 2025-06-04 14:39:42,799 | INFO     | adding to output.list: log.45006595._056220.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/24/log.45006595._056220.job.log.tg
[2025-06-04 10:40:02] 2025-06-04 14:39:42,799 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:40:02] 2025-06-04 14:39:42,799 | INFO     | summary of transferred files:
[2025-06-04 10:40:02] 2025-06-04 14:39:42,799 | INFO     |  -- lfn=log.45006595._056220.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:40:02] 2025-06-04 14:39:42,800 | INFO     | stage-out finished correctly
[2025-06-04 10:40:02] 2025-06-04 14:39:43,782 | INFO     | monitor loop #211: job 0:6679371094 is in state 'finished'
[2025-06-04 10:40:02] 2025-06-04 14:39:43,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:40:02] 2025-06-04 14:39:45,223 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:40:02] 2025-06-04 14:39:45,313 | INFO     | job 6679371094 has state=finished
[2025-06-04 10:40:02] 2025-06-04 14:39:45,314 | INFO     | preparing for final server update for job 6679371094 in state='finished'
[2025-06-04 10:40:02] 2025-06-04 14:39:45,314 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:40:02] 2025-06-04 14:39:45,314 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:40:02] 2025-06-04 14:39:45,314 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:40:02] 2025-06-04 14:39:45,314 | INFO     | job 6679371094 has finished - writing final server update
[2025-06-04 10:40:02] 2025-06-04 14:39:45,315 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:40:02] 2025-06-04 14:39:45,330 | INFO     | executing command: lscpu
[2025-06-04 10:40:02] 2025-06-04 14:39:45,388 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:40:02] 2025-06-04 14:39:46,286 | INFO     | monitor loop #212: job 0:6679371094 is in state 'finished'
[2025-06-04 10:40:02] 2025-06-04 14:39:46,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:40:02] 2025-06-04 14:39:48,164 | INFO     | PID=907502 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 10:40:02] 2025-06-04 14:39:48,164 | INFO     | .. there are 8 such processes running
[2025-06-04 10:40:02] 2025-06-04 14:39:48,789 | INFO     | monitor loop #213: job 0:6679371094 is in state 'finished'
[2025-06-04 10:40:02] 2025-06-04 14:39:48,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:40:02] 2025-06-04 14:39:49,130 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:40:02] 2025-06-04 14:39:49,131 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679371094/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:40:02] 2025-06-04 14:39:49,132 | INFO     | extracted standard info from prmon json
[2025-06-04 10:40:02] 2025-06-04 14:39:49,132 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:40:02] 2025-06-04 14:39:49,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:40:02] 2025-06-04 14:39:49,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:40:02] 2025-06-04 14:39:49,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:40:02] 2025-06-04 14:39:49,135 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:40:02] 2025-06-04 14:39:49,135 | INFO     | sum of square deviations: 17003109.5
[2025-06-04 10:40:02] 2025-06-04 14:39:49,136 | INFO     | sum of deviations: 5826752574.0
[2025-06-04 10:40:02] 2025-06-04 14:39:49,136 | INFO     | mean x: 1749046677.5
[2025-06-04 10:40:02] 2025-06-04 14:39:49,136 | INFO     | mean y: 2679313.210526316
[2025-06-04 10:40:02] 2025-06-04 14:39:49,136 | INFO     | -- intersect: -599373701234.6694
[2025-06-04 10:40:02] 2025-06-04 14:39:49,136 | INFO     | intersect: -599373701234.6694
[2025-06-04 10:40:02] 2025-06-04 14:39:49,136 | INFO     | chi2: 0.7013442710749873
[2025-06-04 10:40:02] 2025-06-04 14:39:49,137 | INFO     | -- intersect: -599373701234.6694
[2025-06-04 10:40:02] 2025-06-04 14:39:49,137 | INFO     | current memory leak: 342.69 B/s (using 38 data points, chi2=0.70)
[2025-06-04 10:40:02] 2025-06-04 14:39:49,138 | INFO     | ..............................
[2025-06-04 10:40:02] 2025-06-04 14:39:49,138 | INFO     | . Timing measurements:
[2025-06-04 10:40:02] 2025-06-04 14:39:49,138 | INFO     | . get job = 0 s
[2025-06-04 10:40:02] 2025-06-04 14:39:49,138 | INFO     | . initial setup = 2 s
[2025-06-04 10:40:02] 2025-06-04 14:39:49,138 | INFO     | . payload setup = 6 s
[2025-06-04 10:40:02] 2025-06-04 14:39:49,138 | INFO     | . stage-in = 0 s
[2025-06-04 10:40:02] 2025-06-04 14:39:49,138 | INFO     | . payload execution = 2737 s
[2025-06-04 10:40:02] 2025-06-04 14:39:49,138 | INFO     | . stage-out = 0 s
[2025-06-04 10:40:02] 2025-06-04 14:39:49,138 | INFO     | . log creation = 0 s
[2025-06-04 10:40:02] 2025-06-04 14:39:49,138 | INFO     | ..............................
[2025-06-04 10:40:02] 2025-06-04 14:39:49,224 | INFO     | 
[2025-06-04 10:40:02] 2025-06-04 14:39:49,224 | INFO     | job summary report
[2025-06-04 10:40:02] 2025-06-04 14:39:49,224 | INFO     | --------------------------------------------------
[2025-06-04 10:40:02] 2025-06-04 14:39:49,224 | INFO     | PanDA job id: 6679371094
[2025-06-04 10:40:02] 2025-06-04 14:39:49,224 | INFO     | task id: 45006595
[2025-06-04 10:40:02] 2025-06-04 14:39:49,224 | INFO     | errors: (none)
[2025-06-04 10:40:02] 2025-06-04 14:39:49,224 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:40:02] 2025-06-04 14:39:49,224 | INFO     | pilot state: finished 
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | transexitcode: 0
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | exeerrorcode: 0
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | exeerrordiag: 
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | exitcode: 0
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | exitmsg: OK
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | cpuconsumptiontime: 25599 s
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | nevents: 400
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | neventsw: 0
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | pid: 914630
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | pgrp: 914630
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | corecount: 12
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | event service: False
[2025-06-04 10:40:02] 2025-06-04 14:39:49,225 | INFO     | sizes: {0: 2397287, 4: 2397493, 11: 2397521, 2747: 2422786, 2749: 2431727, 2751: 2431783, 2755: 2432081}
[2025-06-04 10:40:02] 2025-06-04 14:39:49,226 | INFO     | --------------------------------------------------
[2025-06-04 10:40:02] 2025-06-04 14:39:49,226 | INFO     | 
[2025-06-04 10:40:02] 2025-06-04 14:39:49,226 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:40:02] 2025-06-04 14:39:49,248 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,249 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,249 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,249 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,249 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,249 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,249 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,250 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,250 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,250 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,250 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,250 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,250 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,250 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:40:02] 2025-06-04 14:39:49,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,250 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:40:02] 2025-06-04 14:39:49,250 | INFO     | job 6679371094 has completed (purged errors)
[2025-06-04 10:40:02] 2025-06-04 14:39:49,251 | INFO     | overall cleanup function is called
[2025-06-04 10:40:02] 2025-06-04 14:39:50,258 | INFO     | --- collectZombieJob: --- 10, [914630]
[2025-06-04 10:40:02] 2025-06-04 14:39:50,259 | INFO     | zombie collector waiting for pid 914630
[2025-06-04 10:40:02] 2025-06-04 14:39:50,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:40:02] 2025-06-04 14:39:50,259 | INFO     | collected zombie processes
[2025-06-04 10:40:02] 2025-06-04 14:39:50,259 | INFO     | will attempt to kill all subprocesses of pid=914630
[2025-06-04 10:40:02] 2025-06-04 14:39:50,488 | INFO     | process IDs to be killed: [914630] (in reverse order)
[2025-06-04 10:40:02] 2025-06-04 14:39:50,577 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:40:02] 2025-06-04 14:39:50,577 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:40:02] 2025-06-04 14:39:50,586 | INFO     | did not find any defunct processes belonging to 914630
[2025-06-04 10:40:02] 2025-06-04 14:39:50,595 | INFO     | did not find any defunct processes belonging to 914630
[2025-06-04 10:40:02] 2025-06-04 14:39:50,596 | INFO     | ready for new job
[2025-06-04 10:40:02] 2025-06-04 14:39:50,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:40:02] 2025-06-04 14:39:50,598 | INFO     | **************************************
[2025-06-04 10:40:02] 2025-06-04 14:39:50,598 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:40:02] 2025-06-04 14:39:50,598 | INFO     | **************************************
[2025-06-04 10:40:02] 2025-06-04 14:39:50,598 | INFO     | 
[2025-06-04 10:40:02] 2025-06-04 14:39:50,613 | INFO     | architecture information:
[2025-06-04 10:40:02] 2025-06-04 14:39:50,613 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:40:02] 2025-06-04 14:39:50,628 | INFO     | cat /etc/os-release:
[2025-06-04 10:40:02] NAME="CentOS Linux"
[2025-06-04 10:40:02] VERSION="7 (Core)"
[2025-06-04 10:40:02] ID="centos"
[2025-06-04 10:40:02] ID_LIKE="rhel fedora"
[2025-06-04 10:40:02] VERSION_ID="7"
[2025-06-04 10:40:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:40:02] ANSI_COLOR="0;31"
[2025-06-04 10:40:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:40:02] HOME_URL="https://www.centos.org/"
[2025-06-04 10:40:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:40:02] 
[2025-06-04 10:40:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:40:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:40:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:40:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:40:02] 
[2025-06-04 10:40:02] 2025-06-04 14:39:50,628 | INFO     | **************************************
[2025-06-04 10:40:02] 2025-06-04 14:39:51,131 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:40:02] 2025-06-04 14:39:51,146 | INFO     | sufficient remaining disk space (56306434048 B)
[2025-06-04 10:40:02] 2025-06-04 14:39:51,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:40:02] 2025-06-04 14:39:51,146 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:40:02] 2025-06-04 14:39:51,147 | INFO     | update_server=False
[2025-06-04 10:40:02] 2025-06-04 14:39:51,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:40:02] 2025-06-04 14:39:51,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:40:02] 2025-06-04 14:39:51,147 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:40:02] 2025-06-04 14:39:51,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:40:02] 2025-06-04 14:39:51,148 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:40:02] 2025-06-04 14:39:51,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:40:02] 2025-06-04 14:39:51,148 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:40:02] 2025-06-04 14:39:51,292 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:40:02] 2025-06-04 14:39:51,293 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:40:02] 2025-06-04 14:39:51,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:40:02] 2025-06-04 14:39:51,293 | INFO     | will abort loop
[2025-06-04 10:40:02] 2025-06-04 14:39:51,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:40:02] 2025-06-04 14:39:51,623 | INFO     | all data control threads have been joined
[2025-06-04 10:40:02] 2025-06-04 14:39:52,152 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:52,153 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:52,298 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:52,318 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:52,524 | INFO     | all payload control threads have been joined
[2025-06-04 10:40:02] 2025-06-04 14:39:52,628 | INFO     | [data] control thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:52,755 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:52,771 | INFO     | all job control threads have been joined
[2025-06-04 10:40:02] 2025-06-04 14:39:53,082 | INFO     | [job] validate thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:53,102 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:53,154 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:53,274 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:53,314 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:53,497 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:53,530 | INFO     | [payload] control thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:53,578 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:53,777 | INFO     | [job] control thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:55,325 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:40:02] 2025-06-04 14:39:57,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574066009920)>', '<ExcThread(monitor, started 140573574936320)>']
[2025-06-04 10:40:02] 2025-06-04 14:39:57,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:40:02] 2025-06-04 14:39:57,179 | INFO     | [monitor] control thread has ended
[2025-06-04 10:40:02] 2025-06-04 14:40:02,184 | INFO     | all workflow threads have been joined
[2025-06-04 10:40:02] 2025-06-04 14:40:02,185 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:40:02] 2025-06-04 14:40:02,185 | INFO     | traces error code: 0
[2025-06-04 10:40:02] 2025-06-04 14:40:02,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:40:02] 2025-06-04 14:40:02,356 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:40:02] 2025-06-04 14:40:02,359 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:40:02] 2025-06-04 14:40:02,361 [wrapper] pilotpid: 907502
[2025-06-04 10:40:02] 2025-06-04 14:40:02,363 [wrapper] Pilot exit status: 0
[2025-06-04 10:40:02] 2025-06-04 14:40:02,372 [wrapper] pandaids: 6679371094
[2025-06-04 10:40:02] 2025-06-04 14:40:02,412 [wrapper] cleanup supervisor_pilot  998905 907503
[2025-06-04 10:40:02] 2025-06-04 14:40:02,414 [wrapper] Test setup, not cleaning
[2025-06-04 10:40:02] 2025-06-04 14:40:02,417 [wrapper] apfmon messages muted
[2025-06-04 10:40:02] 2025-06-04 14:40:02,419 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:40:02] 2025-06-04 14:40:02,421 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:40:02]  *** Error codes and diagnostics ***
[2025-06-04 10:40:02]     "exeErrorCode": 0,
[2025-06-04 10:40:02]     "exeErrorDiag": "",
[2025-06-04 10:40:02]     "pilotErrorCode": 0,
[2025-06-04 10:40:02]     "pilotErrorDiag": "",
[2025-06-04 10:40:02]  *** Listing of results directory ***
[2025-06-04 10:40:02] total 390440
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:40:02] -rwx------. 1 boincer umatlas     37140 Jun  4 05:01 runpilot2-wrapper.sh
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 05:01 queuedata.json
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:40:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:53 run_atlas
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:53 job.xml
[2025-06-04 10:40:02] -rw-r--r--. 2 boincer umatlas 217545748 Jun  4 09:53 EVNT.45006593._000844.pool.root.1
[2025-06-04 10:40:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:53 start_atlas.sh
[2025-06-04 10:40:02] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:53 shared
[2025-06-04 10:40:02] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 09:53 input.tar.gz
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:53 boinc_lockfile
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas      2522 Jun  4 09:53 pandaJob.out
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas    986819 Jun  4 09:53 agis_schedconf.cvmfs.json
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:40:02] drwx------. 4 boincer umatlas      4096 Jun  4 09:53 pilot3
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 10:38 init_data.xml
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:39 boinc_task_state.xml
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas 177175526 Jun  4 10:39 HITS.45006595._056220.pool.root.1
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas        95 Jun  4 10:39 pilot_heartbeat.json
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas      1027 Jun  4 10:39 memory_monitor_summary.json
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas    333902 Jun  4 10:39 log.45006595._056220.job.log.tgz.1
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas      7709 Jun  4 10:39 heartbeat.json
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:39 wrapper_checkpoint.txt
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas      4662 Jun  4 10:40 pilotlog.txt
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:40 boinc_mmap_file
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas    295672 Jun  4 10:40 log.45006595._056220.job.log.1
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas       357 Jun  4 10:40 output.list
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:40 runtime_log
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas    645120 Jun  4 10:40 result.tar.gz
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 10:40 runtime_log.err
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas       651 Jun  4 10:40 HuPODmYBzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTunKDmBprntn.diag
[2025-06-04 10:40:02] -rw-r--r--. 1 boincer umatlas     21650 Jun  4 10:40 stderr.txt
[2025-06-04 10:40:02] HITS file was successfully produced:
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas 177175526 Jun  4 10:39 shared/HITS.pool.root.1
[2025-06-04 10:40:02]  *** Contents of shared directory: ***
[2025-06-04 10:40:02] total 386628
[2025-06-04 10:40:02] -rw-r--r--. 2 boincer umatlas 217545748 Jun  4 09:53 ATLAS.root_0
[2025-06-04 10:40:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:53 start_atlas.sh
[2025-06-04 10:40:02] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 09:53 input.tar.gz
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas 177175526 Jun  4 10:39 HITS.pool.root.1
[2025-06-04 10:40:02] -rw-------. 1 boincer umatlas    645120 Jun  4 10:40 result.tar.gz
10:40:03 (903274): run_atlas exited; CPU time 25637.346557
10:40:03 (903274): called boinc_finish(0)

</stderr_txt>
]]>

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