Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:36:04 (17266): wrapper (7.7.26015): starting
02:36:04 (17266): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 02:36:04] Arguments: --nthreads 8
[2025-06-05 02:36:04] Threads: 8
[2025-06-05 02:36:04] Checking for CVMFS
[2025-06-05 02:36:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:36:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:36:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:36:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:36:07] 2.11.2.0 16161 33924 92536 146799 0 159 18638705 25165825 3245 130560 0 18161914 99.811 19079414 2163 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 02:36:07] CVMFS is ok
[2025-06-05 02:36:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:36:07] Checking for apptainer binary...
[2025-06-05 02:36:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:36:07] Running /usr/bin/apptainer --version
[2025-06-05 02:36:07] apptainer version 1.3.2-1.el7
[2025-06-05 02:36:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:36:19] cg-vwn420.simple-grid.lan
[2025-06-05 02:36:19] apptainer works
[2025-06-05 02:36:19] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:36:19] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:36:19] Starting ATLAS job with PandaID=6678965375
[2025-06-05 02:36:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:40:41]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:40:41] 2025-06-05 04:15:57,654 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6678965375/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:40:41] 2025-06-05 04:15:57,655 | INFO     | extracted standard info from prmon json
[2025-06-05 11:40:41] 2025-06-05 04:15:57,655 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:40:41] 2025-06-05 04:15:57,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:40:41] 2025-06-05 04:15:57,655 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:40:41] 2025-06-05 04:15:57,655 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:40:41] 2025-06-05 04:15:57,660 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:40:41] 2025-06-05 04:15:57,661 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 11:40:41] 2025-06-05 04:15:57,662 | INFO     | sum of deviations: -14638387709.0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,662 | INFO     | mean x: 1749090356.5
[2025-06-05 11:40:41] 2025-06-05 04:15:57,663 | INFO     | mean y: 2495694.8971962617
[2025-06-05 11:40:41] 2025-06-05 04:15:57,663 | INFO     | -- intersect: 8427986912.843147
[2025-06-05 11:40:41] 2025-06-05 04:15:57,663 | INFO     | intersect: 8427986912.843147
[2025-06-05 11:40:41] 2025-06-05 04:15:57,663 | INFO     | chi2: 2.6366258981829245
[2025-06-05 11:40:41] 2025-06-05 04:15:57,664 | INFO     | sum of square deviations: 2830787960.0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,665 | INFO     | sum of deviations: -223801863.00000307
[2025-06-05 11:40:41] 2025-06-05 04:15:57,665 | INFO     | mean x: 1749090204.0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,665 | INFO     | mean y: 2506064.980861244
[2025-06-05 11:40:41] 2025-06-05 04:15:57,665 | INFO     | -- intersect: 140788992.4701584
[2025-06-05 11:40:41] 2025-06-05 04:15:57,666 | INFO     | intersect: 140788992.4701584
[2025-06-05 11:40:41] 2025-06-05 04:15:57,666 | INFO     | chi2: 1.8714289725175601
[2025-06-05 11:40:41] 2025-06-05 04:15:57,666 | INFO     | current chi2=1.8714289725175601 (change=29.021823922487933 %)
[2025-06-05 11:40:41] 2025-06-05 04:15:57,666 | INFO     | sum of square deviations: 2632440055.0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,668 | INFO     | sum of deviations: -54515943.999995366
[2025-06-05 11:40:41] 2025-06-05 04:15:57,668 | INFO     | mean x: 1749090051.5
[2025-06-05 11:40:41] 2025-06-05 04:15:57,668 | INFO     | mean y: 2506194.911764706
[2025-06-05 11:40:41] 2025-06-05 04:15:57,668 | INFO     | -- intersect: 38728594.39904306
[2025-06-05 11:40:41] 2025-06-05 04:15:57,668 | INFO     | intersect: 38728594.39904306
[2025-06-05 11:40:41] 2025-06-05 04:15:57,669 | INFO     | chi2: 1.8717465398599868
[2025-06-05 11:40:41] 2025-06-05 04:15:57,669 | INFO     | current chi2=1.8717465398599868 (change=-0.016969243668356046 %)
[2025-06-05 11:40:41] 2025-06-05 04:15:57,669 | INFO     | right removable region: 203
[2025-06-05 11:40:41] 2025-06-05 04:15:57,669 | INFO     | sum of square deviations: 2830787960.0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,671 | INFO     | sum of deviations: -51687155863.999985
[2025-06-05 11:40:41] 2025-06-05 04:15:57,671 | INFO     | mean x: 1749090509.0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,671 | INFO     | mean y: 2522607.3827751195
[2025-06-05 11:40:41] 2025-06-05 04:15:57,671 | INFO     | -- intersect: 31939041709.62103
[2025-06-05 11:40:41] 2025-06-05 04:15:57,671 | INFO     | intersect: 31939041709.62103
[2025-06-05 11:40:41] 2025-06-05 04:15:57,672 | INFO     | chi2: 0.9926466383167898
[2025-06-05 11:40:41] 2025-06-05 04:15:57,672 | INFO     | current chi2=0.9926466383167898 (change=62.35163134061267 %)
[2025-06-05 11:40:41] 2025-06-05 04:15:57,672 | INFO     | sum of square deviations: 2632440055.0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,674 | INFO     | sum of deviations: -51560153010.0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,674 | INFO     | mean x: 1749090661.5
[2025-06-05 11:40:41] 2025-06-05 04:15:57,674 | INFO     | mean y: 2522469.843137255
[2025-06-05 11:40:41] 2025-06-05 04:15:57,674 | INFO     | -- intersect: 34260997592.195774
[2025-06-05 11:40:41] 2025-06-05 04:15:57,674 | INFO     | intersect: 34260997592.195774
[2025-06-05 11:40:41] 2025-06-05 04:15:57,674 | INFO     | chi2: 0.9726402488326836
[2025-06-05 11:40:41] 2025-06-05 04:15:57,675 | INFO     | current chi2=0.9726402488326836 (change=2.0154593499687437 %)
[2025-06-05 11:40:41] 2025-06-05 04:15:57,675 | INFO     | left removable region: 20
[2025-06-05 11:40:41] 2025-06-05 04:15:57,675 | INFO     | sum of square deviations: 1900284932.0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,676 | INFO     | sum of deviations: -23671281738.999992
[2025-06-05 11:40:41] 2025-06-05 04:15:57,676 | INFO     | mean x: 1749090631.0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,677 | INFO     | mean y: 2523816.9453551914
[2025-06-05 11:40:41] 2025-06-05 04:15:57,677 | INFO     | -- intersect: 21790423313.61214
[2025-06-05 11:40:41] 2025-06-05 04:15:57,677 | INFO     | intersect: 21790423313.61214
[2025-06-05 11:40:41] 2025-06-05 04:15:57,677 | INFO     | chi2: 0.15300313214175978
[2025-06-05 11:40:41] 2025-06-05 04:15:57,677 | INFO     | -- intersect: 21790423313.61214
[2025-06-05 11:40:41] 2025-06-05 04:15:57,677 | INFO     | current memory leak: -12.46 B/s (using 183 data points, chi2=0.15)
[2025-06-05 11:40:41] 2025-06-05 04:15:57,678 | INFO     | ..............................
[2025-06-05 11:40:41] 2025-06-05 04:15:57,678 | INFO     | . Timing measurements:
[2025-06-05 11:40:41] 2025-06-05 04:15:57,678 | INFO     | . get job = 0 s
[2025-06-05 11:40:41] 2025-06-05 04:15:57,679 | INFO     | . initial setup = 2 s
[2025-06-05 11:40:41] 2025-06-05 04:15:57,679 | INFO     | . payload setup = 14 s
[2025-06-05 11:40:41] 2025-06-05 04:15:57,679 | INFO     | . stage-in = 0 s
[2025-06-05 11:40:41] 2025-06-05 04:15:57,679 | INFO     | . payload execution = 13020 s
[2025-06-05 11:40:41] 2025-06-05 04:15:57,679 | INFO     | . stage-out = 3 s
[2025-06-05 11:40:41] 2025-06-05 04:15:57,679 | INFO     | . log creation = 1 s
[2025-06-05 11:40:41] 2025-06-05 04:15:57,679 | INFO     | ..............................
[2025-06-05 11:40:41] 2025-06-05 04:15:57,820 | INFO     | 
[2025-06-05 11:40:41] 2025-06-05 04:15:57,821 | INFO     | job summary report
[2025-06-05 11:40:41] 2025-06-05 04:15:57,821 | INFO     | --------------------------------------------------
[2025-06-05 11:40:41] 2025-06-05 04:15:57,821 | INFO     | PanDA job id: 6678965375
[2025-06-05 11:40:41] 2025-06-05 04:15:57,821 | INFO     | task id: 45006595
[2025-06-05 11:40:41] 2025-06-05 04:15:57,821 | INFO     | errors: (none)
[2025-06-05 11:40:41] 2025-06-05 04:15:57,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:40:41] 2025-06-05 04:15:57,821 | INFO     | pilot state: finished 
[2025-06-05 11:40:41] 2025-06-05 04:15:57,821 | INFO     | transexitcode: 0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,821 | INFO     | exeerrorcode: 0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,821 | INFO     | exeerrordiag: 
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | exitcode: 0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | exitmsg: OK
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | cpuconsumptiontime: 49622 s
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | nevents: 400
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | neventsw: 0
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | pid: 29793
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | pgrp: 29793
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | corecount: 8
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | event service: False
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | sizes: {0: 2396458, 1: 2397314, 2: 2397314, 10: 2397548, 12: 2397576, 13038: 2426841, 13039: 2426968, 13044: 2435965, 13045: 2436021, 13135: 2436191}
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | --------------------------------------------------
[2025-06-05 11:40:41] 2025-06-05 04:15:57,822 | INFO     | 
[2025-06-05 11:40:41] 2025-06-05 04:15:57,823 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-05 11:40:41] 2025-06-05 04:15:58,065 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,065 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,065 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,065 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,066 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:40:41] 2025-06-05 04:15:58,067 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,067 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:40:41] 2025-06-05 04:15:58,067 | INFO     | job 6678965375 has completed (purged errors)
[2025-06-05 11:40:41] 2025-06-05 04:15:58,067 | INFO     | overall cleanup function is called
[2025-06-05 11:40:41] 2025-06-05 04:15:59,077 | INFO     | --- collectZombieJob: --- 10, [29793]
[2025-06-05 11:40:41] 2025-06-05 04:15:59,077 | INFO     | zombie collector waiting for pid 29793
[2025-06-05 11:40:41] 2025-06-05 04:15:59,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:40:41] 2025-06-05 04:15:59,077 | INFO     | collected zombie processes
[2025-06-05 11:40:41] 2025-06-05 04:15:59,077 | INFO     | will attempt to kill all subprocesses of pid=29793
[2025-06-05 11:40:41] 2025-06-05 04:15:59,187 | INFO     | process IDs to be killed: [29793] (in reverse order)
[2025-06-05 11:40:41] 2025-06-05 04:16:00,145 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:40:41] 2025-06-05 04:16:00,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:40:41] 2025-06-05 04:16:00,150 | INFO     | did not find any defunct processes belonging to 29793
[2025-06-05 11:40:41] 2025-06-05 04:16:00,158 | INFO     | did not find any defunct processes belonging to 29793
[2025-06-05 11:40:41] 2025-06-05 04:16:00,158 | INFO     | ready for new job
[2025-06-05 11:40:41] 2025-06-05 04:16:00,159 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:40:41] 2025-06-05 04:16:00,161 | INFO     | **************************************
[2025-06-05 11:40:41] 2025-06-05 04:16:00,161 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:40:41] 2025-06-05 04:16:00,161 | INFO     | **************************************
[2025-06-05 11:40:41] 2025-06-05 04:16:00,161 | INFO     | 
[2025-06-05 11:40:41] 2025-06-05 04:16:00,162 | INFO     | pilot is running in a VM
[2025-06-05 11:40:41] 2025-06-05 04:16:00,162 | INFO     | architecture information:
[2025-06-05 11:40:41] 2025-06-05 04:16:00,163 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:40:41] 2025-06-05 04:16:00,431 | INFO     | cat /etc/os-release:
[2025-06-05 11:40:41] NAME="CentOS Linux"
[2025-06-05 11:40:41] VERSION="7 (Core)"
[2025-06-05 11:40:41] ID="centos"
[2025-06-05 11:40:41] ID_LIKE="rhel fedora"
[2025-06-05 11:40:41] VERSION_ID="7"
[2025-06-05 11:40:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:40:41] ANSI_COLOR="0;31"
[2025-06-05 11:40:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:40:41] HOME_URL="https://www.centos.org/"
[2025-06-05 11:40:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:40:41] 
[2025-06-05 11:40:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:40:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:40:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:40:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:40:41] 
[2025-06-05 11:40:41] 2025-06-05 04:16:00,432 | INFO     | **************************************
[2025-06-05 11:40:41] 2025-06-05 04:16:00,935 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-05 11:40:41] 2025-06-05 04:16:01,231 | INFO     | sufficient remaining disk space (497010343936 B)
[2025-06-05 11:40:41] 2025-06-05 04:16:01,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:40:41] 2025-06-05 04:16:01,232 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:40:41] 2025-06-05 04:16:01,232 | INFO     | update_server=False
[2025-06-05 11:40:41] 2025-06-05 04:16:01,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:40:41] 2025-06-05 04:16:01,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:40:41] 2025-06-05 04:16:01,522 | INFO     | aborting loop
[2025-06-05 11:40:41] 2025-06-05 04:16:01,680 | INFO     | all data control threads have been joined
[2025-06-05 11:40:41] 2025-06-05 04:16:01,794 | INFO     | all payload control threads have been joined
[2025-06-05 11:40:41] 2025-06-05 04:16:02,108 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:40:41] 2025-06-05 04:16:02,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:40:41] 2025-06-05 04:16:02,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:40:41] 2025-06-05 04:16:02,238 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:02,281 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:02,368 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:02,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:40:41] 2025-06-05 04:16:02,506 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:02,528 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:02,560 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:02,609 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:02,686 | INFO     | [data] control thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:02,800 | INFO     | [payload] control thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:02,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:40:41] 2025-06-05 04:16:02,903 | INFO     | all job control threads have been joined
[2025-06-05 11:40:41] 2025-06-05 04:16:02,933 | INFO     | [job] validate thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:03,297 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:03,340 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:03,843 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:03,909 | INFO     | [job] control thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:04,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:40:41] 2025-06-05 04:16:04,482 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:08,465 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:40:41] 2025-06-05 04:16:10,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140409056307008)>', '<ExcThread(monitor, started 140408621348608)>']
[2025-06-05 11:40:41] 2025-06-05 04:16:10,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:40:41] 2025-06-05 04:16:10,156 | INFO     | [monitor] control thread has ended
[2025-06-05 11:40:41] 2025-06-05 04:16:15,163 | INFO     | all workflow threads have been joined
[2025-06-05 11:40:41] 2025-06-05 04:16:15,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:40:41] 2025-06-05 04:16:15,164 | INFO     | traces error code: 0
[2025-06-05 11:40:41] 2025-06-05 04:16:15,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:40:41] 2025-06-05 04:16:15,567 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:40:41] 2025-06-05 04:16:15,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:40:41] 2025-06-05 04:16:15,727 [wrapper] pilotpid: 22757
[2025-06-05 11:40:41] 2025-06-05 04:16:15,749 [wrapper] Pilot exit status: 0
[2025-06-05 11:40:41] 2025-06-05 04:16:15,992 [wrapper] pandaids: 6678965375
[2025-06-05 11:40:41] 2025-06-05 04:16:16,235 [wrapper] cleanup supervisor_pilot 20307 22758
[2025-06-05 11:40:41] 2025-06-05 04:16:16,324 [wrapper] Test setup, not cleaning
[2025-06-05 11:40:41] 2025-06-05 04:16:16,407 [wrapper] apfmon messages muted
[2025-06-05 11:40:41] 2025-06-05 04:16:16,492 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:40:41] 2025-06-05 04:16:16,546 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:40:41]  *** Error codes and diagnostics ***
[2025-06-05 11:40:41]     "exeErrorCode": 0,
[2025-06-05 11:40:41]     "exeErrorDiag": "",
[2025-06-05 11:40:41]     "pilotErrorCode": 0,
[2025-06-05 11:40:41]     "pilotErrorDiag": "",
[2025-06-05 11:40:41]  *** Listing of results directory ***
[2025-06-05 11:40:41] total 390928
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:31 pilot3.tar.gz
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc      5111 Jun  4 10:32 queuedata.json
[2025-06-05 11:40:41] -rwx------. 1 boinc boinc     37140 Jun  4 10:32 runpilot2-wrapper.sh
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc       100 Jun  5 02:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:40:41] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 02:36 run_atlas
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc       105 Jun  5 02:36 job.xml
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc      6392 Jun  5 02:36 init_data.xml
[2025-06-05 11:40:41] -rw-r--r--. 2 boinc boinc 214509366 Jun  5 02:36 EVNT.45006593._001248.pool.root.1
[2025-06-05 11:40:41] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:36 start_atlas.sh
[2025-06-05 11:40:41] drwxrwx--x. 2 boinc boinc        68 Jun  5 02:36 shared
[2025-06-05 11:40:41] -rw-r--r--. 2 boinc boinc    508883 Jun  5 02:36 input.tar.gz
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc         0 Jun  5 02:36 boinc_lockfile
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc      2522 Jun  5 02:36 pandaJob.out
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc    987117 Jun  5 02:36 agis_schedconf.cvmfs.json
[2025-06-05 11:40:41] drwx------. 4 boinc boinc      4096 Jun  5 02:36 pilot3
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc 178989633 Jun  5 06:13 HITS.45006595._055716.pool.root.1
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc       531 Jun  5 06:13 boinc_task_state.xml
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc      1014 Jun  5 06:14 memory_monitor_summary.json
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc   1598969 Jun  5 06:14 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc    360643 Jun  5 06:14 log.45006595._055716.job.log.tgz.1
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc      7684 Jun  5 06:15 heartbeat.json
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc        95 Jun  5 06:16 pilot_heartbeat.json
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc      4416 Jun  5 06:16 pilotlog.txt
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc   1138013 Jun  5 06:16 log.45006595._055716.job.log.1
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc       357 Jun  5 06:16 output.list
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc       620 Jun  5 06:16 runtime_log
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc   1515520 Jun  5 06:16 result.tar.gz
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc      8659 Jun  5 06:16 runtime_log.err
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc       657 Jun  5 06:16 iKzKDmYjyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfnnKDmJu39Eo.diag
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc        28 Jun  5 11:40 wrapper_checkpoint.txt
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc      8192 Jun  5 11:40 boinc_mmap_file
[2025-06-05 11:40:41] -rw-r--r--. 1 boinc boinc     20521 Jun  5 11:40 stderr.txt
[2025-06-05 11:40:41] HITS file was successfully produced:
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc 178989633 Jun  5 06:13 shared/HITS.pool.root.1
[2025-06-05 11:40:41]  *** Contents of shared directory: ***
[2025-06-05 11:40:41] total 386276
[2025-06-05 11:40:41] -rw-r--r--. 2 boinc boinc 214509366 Jun  5 02:36 ATLAS.root_0
[2025-06-05 11:40:41] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:36 start_atlas.sh
[2025-06-05 11:40:41] -rw-r--r--. 2 boinc boinc    508883 Jun  5 02:36 input.tar.gz
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc 178989633 Jun  5 06:13 HITS.pool.root.1
[2025-06-05 11:40:41] -rw-------. 1 boinc boinc   1515520 Jun  5 06:16 result.tar.gz
11:40:43 (17266): run_atlas exited; CPU time 49786.520272
11:40:43 (17266): called boinc_finish(0)

</stderr_txt>
]]>

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