Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:24:31 (353943): wrapper (7.7.26015): starting
06:24:31 (353943): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 06:24:31] Arguments: --nthreads 12
[2025-06-05 06:24:31] Threads: 12
[2025-06-05 06:24:31] Checking for CVMFS
[2025-06-05 06:24:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:24:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:24:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:24:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:24:32] 2.12.7.0 8354 9373 92264 146806 3 56 38100209 46080000 922 130560 0 12582424 99.996 1278021 37851 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-05 06:24:32] CVMFS is ok
[2025-06-05 06:24:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:24:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 06:24:32] Further information can be found at the LHC@home message board.
[2025-06-05 06:24:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:24:32] Checking for apptainer binary...
[2025-06-05 06:24:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:24:32] Running /usr/bin/apptainer --version
[2025-06-05 06:24:32] apptainer version 1.4.1-1.el9
[2025-06-05 06:24:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:24:32] minis01.farm.particle.cz
[2025-06-05 06:24:32] apptainer works
[2025-06-05 06:24:32] Set ATHENA_PROC_NUMBER=12
[2025-06-05 06:24:32] Set ATHENA_CORE_NUMBER=12
[2025-06-05 06:24:32] Starting ATLAS job with PandaID=6679436169
[2025-06-05 06:24:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:12:23]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:12:23]  is_altstaged=None
[2025-06-05 07:12:23]  is_tar=False
[2025-06-05 07:12:23]  lfn=log.45006595._056300.job.log.tgz.1
[2025-06-05 07:12:23]  mtime=0
[2025-06-05 07:12:23]  protocol_id=None
[2025-06-05 07:12:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 07:12:23]  replicas=None
[2025-06-05 07:12:23]  scope=mc23_13p6TeV
[2025-06-05 07:12:23]  status=None
[2025-06-05 07:12:23]  status_code=0
[2025-06-05 07:12:23]  storage_token=
[2025-06-05 07:12:23]  surl=/scratch/.boinc/slots/2/PanDA_Pilot-6679436169/log.45006595._056300.job.log.tgz.1
[2025-06-05 07:12:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/8f/log.45006595._056300.job.log.tgz.1
[2025-06-05 07:12:23]  workdir=None
[2025-06-05 07:12:23] ]
[2025-06-05 07:12:23] 2025-06-05 05:11:57,649 | INFO     | transferring file log.45006595._056300.job.log.tgz.1 from /scratch/.boinc/slots/2/PanDA_Pilot-6679436169/log.45006595._056300.job.log.tgz.1 to /scratch/.boinc/slot
[2025-06-05 07:12:23] 2025-06-05 05:11:57,649 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/2/PanDA_Pilot-6679436169/log.45006595._056300.job.log.tgz.1 /scratch/.boinc/slots/2/log.45006595._056300.j
[2025-06-05 07:12:23] 2025-06-05 05:11:57,665 | INFO     | adding to output.list: log.45006595._056300.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/8f/log.45006595._056300.job.log.tg
[2025-06-05 07:12:23] 2025-06-05 05:11:57,666 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 07:12:23] 2025-06-05 05:11:57,666 | INFO     | summary of transferred files:
[2025-06-05 07:12:23] 2025-06-05 05:11:57,666 | INFO     |  -- lfn=log.45006595._056300.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 07:12:23] 2025-06-05 05:11:57,666 | INFO     | stage-out finished correctly
[2025-06-05 07:12:23] 2025-06-05 05:11:58,025 | WARNING  | process 364747 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 07:12:23] 2025-06-05 05:11:58,025 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6679436169/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:12:23] 2025-06-05 05:11:58,154 | INFO     | number of running child processes to parent process 364747: 1
[2025-06-05 07:12:23] 2025-06-05 05:11:58,154 | INFO     | maximum number of monitored processes: 6
[2025-06-05 07:12:23] 2025-06-05 05:11:59,400 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 07:12:23] 2025-06-05 05:11:59,480 | INFO     | job 6679436169 has state=finished
[2025-06-05 07:12:23] 2025-06-05 05:11:59,481 | INFO     | preparing for final server update for job 6679436169 in state='finished'
[2025-06-05 07:12:23] 2025-06-05 05:11:59,481 | INFO     | this job has now completed (state=finished)
[2025-06-05 07:12:23] 2025-06-05 05:11:59,481 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 07:12:23] 2025-06-05 05:11:59,481 | INFO     | log transfer has been attempted: DONE
[2025-06-05 07:12:23] 2025-06-05 05:11:59,481 | INFO     | job 6679436169 has finished - writing final server update
[2025-06-05 07:12:23] 2025-06-05 05:11:59,482 | INFO     | total number of processed events: 400 (read)
[2025-06-05 07:12:23] 2025-06-05 05:11:59,485 | INFO     | executing command: lscpu
[2025-06-05 07:12:23] 2025-06-05 05:11:59,519 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 07:12:23] 2025-06-05 05:12:00,657 | INFO     | monitor loop #216: job 0:6679436169 is in state 'finished'
[2025-06-05 07:12:23] 2025-06-05 05:12:00,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 07:12:23] 2025-06-05 05:12:02,964 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 07:12:23] 2025-06-05 05:12:02,964 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6679436169/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:12:23] 2025-06-05 05:12:02,965 | INFO     | extracted standard info from prmon json
[2025-06-05 07:12:23] 2025-06-05 05:12:02,965 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 07:12:23] 2025-06-05 05:12:02,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:12:23] 2025-06-05 05:12:02,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:12:23] 2025-06-05 05:12:02,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:12:23] 2025-06-05 05:12:02,967 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:12:23] 2025-06-05 05:12:02,967 | INFO     | sum of square deviations: 19832930.0
[2025-06-05 07:12:23] 2025-06-05 05:12:02,968 | INFO     | sum of deviations: -1188752872.0000005
[2025-06-05 07:12:23] 2025-06-05 05:12:02,968 | INFO     | mean x: 1749098999.5
[2025-06-05 07:12:23] 2025-06-05 05:12:02,968 | INFO     | mean y: 2946027.2
[2025-06-05 07:12:23] 2025-06-05 05:12:02,968 | INFO     | -- intersect: 104841033948.04439
[2025-06-05 07:12:23] 2025-06-05 05:12:02,968 | INFO     | intersect: 104841033948.04439
[2025-06-05 07:12:23] 2025-06-05 05:12:02,968 | INFO     | chi2: 0.0144307884498878
[2025-06-05 07:12:23] 2025-06-05 05:12:02,968 | INFO     | -- intersect: 104841033948.04439
[2025-06-05 07:12:23] 2025-06-05 05:12:02,969 | INFO     | current memory leak: -59.94 B/s (using 40 data points, chi2=0.01)
[2025-06-05 07:12:23] 2025-06-05 05:12:02,969 | INFO     | ..............................
[2025-06-05 07:12:23] 2025-06-05 05:12:02,969 | INFO     | . Timing measurements:
[2025-06-05 07:12:23] 2025-06-05 05:12:02,969 | INFO     | . get job = 0 s
[2025-06-05 07:12:23] 2025-06-05 05:12:02,969 | INFO     | . initial setup = 1 s
[2025-06-05 07:12:23] 2025-06-05 05:12:02,969 | INFO     | . payload setup = 5 s
[2025-06-05 07:12:23] 2025-06-05 05:12:02,970 | INFO     | . stage-in = 0 s
[2025-06-05 07:12:23] 2025-06-05 05:12:02,970 | INFO     | . payload execution = 2812 s
[2025-06-05 07:12:23] 2025-06-05 05:12:02,970 | INFO     | . stage-out = 0 s
[2025-06-05 07:12:23] 2025-06-05 05:12:02,970 | INFO     | . log creation = 0 s
[2025-06-05 07:12:23] 2025-06-05 05:12:02,970 | INFO     | ..............................
[2025-06-05 07:12:23] 2025-06-05 05:12:03,490 | INFO     | 
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | job summary report
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | --------------------------------------------------
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | PanDA job id: 6679436169
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | task id: 45006595
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | errors: (none)
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | pilot state: finished 
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | transexitcode: 0
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | exeerrorcode: 0
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | exeerrordiag: 
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | exitcode: 0
[2025-06-05 07:12:23] 2025-06-05 05:12:03,491 | INFO     | exitmsg: OK
[2025-06-05 07:12:23] 2025-06-05 05:12:03,492 | INFO     | cpuconsumptiontime: 29740 s
[2025-06-05 07:12:23] 2025-06-05 05:12:03,492 | INFO     | nevents: 400
[2025-06-05 07:12:23] 2025-06-05 05:12:03,492 | INFO     | neventsw: 0
[2025-06-05 07:12:23] 2025-06-05 05:12:03,492 | INFO     | pid: 364747
[2025-06-05 07:12:23] 2025-06-05 05:12:03,492 | INFO     | pgrp: 364747
[2025-06-05 07:12:23] 2025-06-05 05:12:03,492 | INFO     | corecount: 12
[2025-06-05 07:12:23] 2025-06-05 05:12:03,492 | INFO     | event service: False
[2025-06-05 07:12:23] 2025-06-05 05:12:03,492 | INFO     | sizes: {0: 2397110, 1: 2397309, 4: 2397515, 11: 2397543, 2821: 2422873, 2823: 2431816, 2824: 2432000, 2828: 2432170}
[2025-06-05 07:12:23] 2025-06-05 05:12:03,492 | INFO     | --------------------------------------------------
[2025-06-05 07:12:23] 2025-06-05 05:12:03,492 | INFO     | 
[2025-06-05 07:12:23] 2025-06-05 05:12:03,492 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-06-05 07:12:23] 2025-06-05 05:12:03,508 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,509 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,509 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,509 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,509 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,511 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:12:23] 2025-06-05 05:12:03,511 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,511 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:12:23] 2025-06-05 05:12:03,511 | INFO     | job 6679436169 has completed (purged errors)
[2025-06-05 07:12:23] 2025-06-05 05:12:03,511 | INFO     | overall cleanup function is called
[2025-06-05 07:12:23] 2025-06-05 05:12:04,520 | INFO     | --- collectZombieJob: --- 10, [364747]
[2025-06-05 07:12:23] 2025-06-05 05:12:04,520 | INFO     | zombie collector waiting for pid 364747
[2025-06-05 07:12:23] 2025-06-05 05:12:04,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:12:23] 2025-06-05 05:12:04,521 | INFO     | collected zombie processes
[2025-06-05 07:12:23] 2025-06-05 05:12:04,521 | INFO     | will attempt to kill all subprocesses of pid=364747
[2025-06-05 07:12:23] 2025-06-05 05:12:04,655 | INFO     | process IDs to be killed: [364747] (in reverse order)
[2025-06-05 07:12:23] 2025-06-05 05:12:04,702 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:12:23] 2025-06-05 05:12:04,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:12:23] 2025-06-05 05:12:04,706 | INFO     | did not find any defunct processes belonging to 364747
[2025-06-05 07:12:23] 2025-06-05 05:12:04,710 | INFO     | did not find any defunct processes belonging to 364747
[2025-06-05 07:12:23] 2025-06-05 05:12:04,710 | INFO     | ready for new job
[2025-06-05 07:12:23] 2025-06-05 05:12:04,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:12:23] 2025-06-05 05:12:04,711 | INFO     | **************************************
[2025-06-05 07:12:23] 2025-06-05 05:12:04,711 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:12:23] 2025-06-05 05:12:04,711 | INFO     | **************************************
[2025-06-05 07:12:23] 2025-06-05 05:12:04,711 | INFO     | 
[2025-06-05 07:12:23] 2025-06-05 05:12:04,713 | INFO     | architecture information:
[2025-06-05 07:12:23] 2025-06-05 05:12:04,713 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:12:23] 2025-06-05 05:12:04,726 | INFO     | cat /etc/os-release:
[2025-06-05 07:12:23] NAME="CentOS Linux"
[2025-06-05 07:12:23] VERSION="7 (Core)"
[2025-06-05 07:12:23] ID="centos"
[2025-06-05 07:12:23] ID_LIKE="rhel fedora"
[2025-06-05 07:12:23] VERSION_ID="7"
[2025-06-05 07:12:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:12:23] ANSI_COLOR="0;31"
[2025-06-05 07:12:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:12:23] HOME_URL="https://www.centos.org/"
[2025-06-05 07:12:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:12:23] 
[2025-06-05 07:12:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:12:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:12:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:12:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:12:23] 
[2025-06-05 07:12:23] 2025-06-05 05:12:04,726 | INFO     | **************************************
[2025-06-05 07:12:23] 2025-06-05 05:12:05,229 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-06-05 07:12:23] 2025-06-05 05:12:05,244 | INFO     | sufficient remaining disk space (714923311104 B)
[2025-06-05 07:12:23] 2025-06-05 05:12:05,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:12:23] 2025-06-05 05:12:05,244 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:12:23] 2025-06-05 05:12:05,244 | INFO     | update_server=False
[2025-06-05 07:12:23] 2025-06-05 05:12:05,244 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:12:23] 2025-06-05 05:12:05,254 | INFO     | all payload control threads have been joined
[2025-06-05 07:12:23] 2025-06-05 05:12:05,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:12:23] 2025-06-05 05:12:05,663 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 07:12:23] 2025-06-05 05:12:05,663 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 07:12:23] 2025-06-05 05:12:05,664 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:12:23] 2025-06-05 05:12:05,664 | INFO     | will abort loop
[2025-06-05 07:12:23] 2025-06-05 05:12:05,750 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:12:23] 2025-06-05 05:12:05,794 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:12:23] 2025-06-05 05:12:05,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:12:23] 2025-06-05 05:12:05,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:12:23] 2025-06-05 05:12:05,892 | INFO     | all data control threads have been joined
[2025-06-05 07:12:23] 2025-06-05 05:12:06,250 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:06,259 | INFO     | [payload] control thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:06,313 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:06,487 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:06,488 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:06,578 | INFO     | all job control threads have been joined
[2025-06-05 07:12:23] 2025-06-05 05:12:06,667 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:06,669 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:06,897 | INFO     | [data] control thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:07,101 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:07,152 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:07,583 | INFO     | [job] control thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:07,652 | INFO     | [job] validate thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:07,756 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:08,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:12:23] 2025-06-05 05:12:09,067 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:09,493 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:16,183 | INFO     | job.realtimelogging is not enabled
[2025-06-05 07:12:23] 2025-06-05 05:12:17,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:12:23] 2025-06-05 05:12:18,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140608669742912)>', '<ExcThread(monitor, started 140608387647232)>']
[2025-06-05 07:12:23] 2025-06-05 05:12:18,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:12:23] 2025-06-05 05:12:18,861 | INFO     | [monitor] control thread has ended
[2025-06-05 07:12:23] 2025-06-05 05:12:23,579 | INFO     | all workflow threads have been joined
[2025-06-05 07:12:23] 2025-06-05 05:12:23,579 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:12:23] 2025-06-05 05:12:23,579 | INFO     | traces error code: 0
[2025-06-05 07:12:23] 2025-06-05 05:12:23,580 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:12:23] 2025-06-05 05:12:23,674 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:12:23] 2025-06-05 05:12:23,677 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:12:23] 2025-06-05 05:12:23,680 [wrapper] pilotpid: 357718
[2025-06-05 07:12:23] 2025-06-05 05:12:23,682 [wrapper] Pilot exit status: 0
[2025-06-05 07:12:23] 2025-06-05 05:12:23,693 [wrapper] pandaids: 6679436169
[2025-06-05 07:12:23] 2025-06-05 05:12:23,727 [wrapper] cleanup supervisor_pilot  415342 357719
[2025-06-05 07:12:23] 2025-06-05 05:12:23,730 [wrapper] Test setup, not cleaning
[2025-06-05 07:12:23] 2025-06-05 05:12:23,732 [wrapper] apfmon messages muted
[2025-06-05 07:12:23] 2025-06-05 05:12:23,735 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:12:23] 2025-06-05 05:12:23,737 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:12:23]  *** Error codes and diagnostics ***
[2025-06-05 07:12:23]     "exeErrorCode": 0,
[2025-06-05 07:12:23]     "exeErrorDiag": "",
[2025-06-05 07:12:23]     "pilotErrorCode": 0,
[2025-06-05 07:12:23]     "pilotErrorDiag": "",
[2025-06-05 07:12:23]  *** Listing of results directory ***
[2025-06-05 07:12:23] total 393044
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc      5111 Jun  4 11:03 queuedata.json
[2025-06-05 07:12:23] -rwx------ 1 boinc boinc     37140 Jun  4 11:03 runpilot2-wrapper.sh
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc       100 Jun  5 06:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:12:23] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 06:24 run_atlas
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc       105 Jun  5 06:24 job.xml
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc      6523 Jun  5 06:24 init_data.xml
[2025-06-05 07:12:23] -rw-r--r-- 2 boinc boinc 216620477 Jun  5 06:24 EVNT.45006593._000120.pool.root.1
[2025-06-05 07:12:23] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:24 start_atlas.sh
[2025-06-05 07:12:23] drwxrwx--x 2 boinc boinc      4096 Jun  5 06:24 shared
[2025-06-05 07:12:23] -rw-r--r-- 2 boinc boinc    508879 Jun  5 06:24 input.tar.gz
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc         0 Jun  5 06:24 boinc_lockfile
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc      2519 Jun  5 06:24 pandaJob.out
[2025-06-05 07:12:23] -rw------- 1 boinc boinc    987109 Jun  5 06:24 agis_schedconf.cvmfs.json
[2025-06-05 07:12:23] -rw------- 1 boinc boinc   1598969 Jun  5 06:24 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:12:23] drwx------ 4 boinc boinc      4096 Jun  5 06:24 pilot3
[2025-06-05 07:12:23] -rw------- 1 boinc boinc        95 Jun  5 07:11 pilot_heartbeat.json
[2025-06-05 07:12:23] -rw------- 1 boinc boinc 180757412 Jun  5 07:11 HITS.45006595._056300.pool.root.1
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc       529 Jun  5 07:11 boinc_task_state.xml
[2025-06-05 07:12:23] -rw------- 1 boinc boinc      1012 Jun  5 07:11 memory_monitor_summary.json
[2025-06-05 07:12:23] -rw------- 1 boinc boinc    331317 Jun  5 07:11 log.45006595._056300.job.log.tgz.1
[2025-06-05 07:12:23] -rw------- 1 boinc boinc      7683 Jun  5 07:12 heartbeat.json
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc        27 Jun  5 07:12 wrapper_checkpoint.txt
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc      8192 Jun  5 07:12 boinc_mmap_file
[2025-06-05 07:12:23] -rw------- 1 boinc boinc      4613 Jun  5 07:12 pilotlog.txt
[2025-06-05 07:12:23] -rw------- 1 boinc boinc    302775 Jun  5 07:12 log.45006595._056300.job.log.1
[2025-06-05 07:12:23] -rw------- 1 boinc boinc       357 Jun  5 07:12 output.list
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc       620 Jun  5 07:12 runtime_log
[2025-06-05 07:12:23] -rw------- 1 boinc boinc    655360 Jun  5 07:12 result.tar.gz
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc      8720 Jun  5 07:12 runtime_log.err
[2025-06-05 07:12:23] -rw------- 1 boinc boinc       662 Jun  5 07:12 eZ5MDm4Czg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm90aKDmLclKMm.diag
[2025-06-05 07:12:23] -rw-r--r-- 1 boinc boinc     21386 Jun  5 07:12 stderr.txt
[2025-06-05 07:12:23] HITS file was successfully produced:
[2025-06-05 07:12:23] -rw------- 1 boinc boinc 180757412 Jun  5 07:11 shared/HITS.pool.root.1
[2025-06-05 07:12:23]  *** Contents of shared directory: ***
[2025-06-05 07:12:23] total 389232
[2025-06-05 07:12:23] -rw-r--r-- 2 boinc boinc 216620477 Jun  5 06:24 ATLAS.root_0
[2025-06-05 07:12:23] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:24 start_atlas.sh
[2025-06-05 07:12:23] -rw-r--r-- 2 boinc boinc    508879 Jun  5 06:24 input.tar.gz
[2025-06-05 07:12:23] -rw------- 1 boinc boinc 180757412 Jun  5 07:11 HITS.pool.root.1
[2025-06-05 07:12:23] -rw------- 1 boinc boinc    655360 Jun  5 07:12 result.tar.gz
07:12:25 (353943): run_atlas exited; CPU time 29762.442590
07:12:25 (353943): called boinc_finish(0)

</stderr_txt>
]]>

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