Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:28:11 (2595928): wrapper (7.7.26015): starting
22:28:11 (2595928): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 22:28:11] Arguments: --nthreads 12
[2025-06-04 22:28:11] Threads: 12
[2025-06-04 22:28:11] Checking for CVMFS
[2025-06-04 22:28:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:28:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:28:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:28:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:28:13] 2.12.7.0 9268 8916 225008 146793 1 216 42675807 46080000 39559 130560 0 57176850 99.938 10626993 19866 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-04 22:28:13] CVMFS is ok
[2025-06-04 22:28:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:28:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:28:13] Further information can be found at the LHC@home message board.
[2025-06-04 22:28:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:28:13] Checking for apptainer binary...
[2025-06-04 22:28:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:28:13] Running /usr/bin/apptainer --version
[2025-06-04 22:28:13] apptainer version 1.4.1-1.el9
[2025-06-04 22:28:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:29:35] mff2104.farm.particle.cz
[2025-06-04 22:29:35] apptainer works
[2025-06-04 22:29:35] Set ATHENA_PROC_NUMBER=12
[2025-06-04 22:29:35] Set ATHENA_CORE_NUMBER=12
[2025-06-04 22:29:35] Starting ATLAS job with PandaID=6679435808
[2025-06-04 22:29:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:07:16]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:07:16] 2025-06-04 22:01:24,048 | INFO     | monitor loop #374: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:24,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:24,117 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 00:07:16] 2025-06-04 22:01:26,563 | INFO     | monitor loop #375: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:26,563 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:29,070 | INFO     | monitor loop #376: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:29,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:31,578 | INFO     | monitor loop #377: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:31,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:34,085 | INFO     | monitor loop #378: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:34,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:36,589 | INFO     | monitor loop #379: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:36,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:39,094 | INFO     | monitor loop #380: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:39,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:41,600 | INFO     | monitor loop #381: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:41,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:43,310 | INFO     | PID=2633814 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 00:07:16] 2025-06-04 22:01:43,311 | INFO     | .. there are 97 such processes running
[2025-06-05 00:07:16] 2025-06-04 22:01:44,109 | INFO     | monitor loop #382: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:44,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:46,617 | INFO     | monitor loop #383: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:46,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:48,330 | INFO     | 5453s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 00:07:16] 2025-06-04 22:01:49,123 | INFO     | monitor loop #384: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:49,123 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:51,633 | INFO     | monitor loop #385: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:51,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:54,141 | INFO     | monitor loop #386: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:54,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:56,646 | INFO     | monitor loop #387: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:56,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:01:59,150 | INFO     | monitor loop #388: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:01:59,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:02:01,662 | INFO     | monitor loop #389: job 0:6679435808 is in state 'finished'
[2025-06-05 00:07:16] 2025-06-04 22:02:01,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:07:16] 2025-06-04 22:02:02,521 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 00:07:16] 2025-06-04 22:02:02,522 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6679435808/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:07:16] 2025-06-04 22:02:02,523 | INFO     | extracted standard info from prmon json
[2025-06-05 00:07:16] 2025-06-04 22:02:02,523 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:07:16] 2025-06-04 22:02:02,523 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:07:16] 2025-06-04 22:02:02,523 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:07:16] 2025-06-04 22:02:02,524 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:07:16] 2025-06-04 22:02:02,525 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:07:16] 2025-06-04 22:02:02,533 | INFO     | sum of square deviations: 152877597.18987346
[2025-06-05 00:07:16] 2025-06-04 22:02:02,534 | INFO     | sum of deviations: 7905151274.962025
[2025-06-05 00:07:16] 2025-06-04 22:02:02,534 | INFO     | mean x: 1749071939.101266
[2025-06-05 00:07:16] 2025-06-04 22:02:02,534 | INFO     | mean y: 2651558.379746835
[2025-06-05 00:07:16] 2025-06-04 22:02:02,534 | INFO     | -- intersect: -90440150549.59677
[2025-06-05 00:07:16] 2025-06-04 22:02:02,534 | INFO     | intersect: -90440150549.59677
[2025-06-05 00:07:16] 2025-06-04 22:02:02,534 | INFO     | chi2: 0.5845392428302987
[2025-06-05 00:07:16] 2025-06-04 22:02:02,534 | INFO     | -- intersect: -90440150549.59677
[2025-06-05 00:07:16] 2025-06-04 22:02:02,535 | INFO     | current memory leak: 51.71 B/s (using 79 data points, chi2=0.58)
[2025-06-05 00:07:16] 2025-06-04 22:02:02,535 | INFO     | ..............................
[2025-06-05 00:07:16] 2025-06-04 22:02:02,535 | INFO     | . Timing measurements:
[2025-06-05 00:07:16] 2025-06-04 22:02:02,535 | INFO     | . get job = 0 s
[2025-06-05 00:07:16] 2025-06-04 22:02:02,535 | INFO     | . initial setup = 5 s
[2025-06-05 00:07:16] 2025-06-04 22:02:02,536 | INFO     | . payload setup = 67 s
[2025-06-05 00:07:16] 2025-06-04 22:02:02,536 | INFO     | . stage-in = 0 s
[2025-06-05 00:07:16] 2025-06-04 22:02:02,536 | INFO     | . payload execution = 5259 s
[2025-06-05 00:07:16] 2025-06-04 22:02:02,536 | INFO     | . stage-out = 2 s
[2025-06-05 00:07:16] 2025-06-04 22:02:02,536 | INFO     | . log creation = 0 s
[2025-06-05 00:07:16] 2025-06-04 22:02:02,536 | INFO     | ..............................
[2025-06-05 00:07:16] 2025-06-04 22:02:02,907 | INFO     | 
[2025-06-05 00:07:16] 2025-06-04 22:02:02,907 | INFO     | job summary report
[2025-06-05 00:07:16] 2025-06-04 22:02:02,907 | INFO     | --------------------------------------------------
[2025-06-05 00:07:16] 2025-06-04 22:02:02,907 | INFO     | PanDA job id: 6679435808
[2025-06-05 00:07:16] 2025-06-04 22:02:02,907 | INFO     | task id: 45006595
[2025-06-05 00:07:16] 2025-06-04 22:02:02,907 | INFO     | errors: (none)
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | pilot state: finished 
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | transexitcode: 0
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | exeerrorcode: 0
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | exeerrordiag: 
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | exitcode: 0
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | exitmsg: OK
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | cpuconsumptiontime: 33702 s
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | nevents: 400
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | neventsw: 0
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | pid: 2680214
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | pgrp: 2680214
[2025-06-05 00:07:16] 2025-06-04 22:02:02,908 | INFO     | corecount: 12
[2025-06-05 00:07:16] 2025-06-04 22:02:02,909 | INFO     | event service: False
[2025-06-05 00:07:16] 2025-06-04 22:02:02,909 | INFO     | sizes: {0: 2397122, 1: 2397321, 12: 2397321, 22: 2397349, 33: 2397377, 41: 2397639, 44: 2397795, 5331: 2424155, 5332: 2424154, 5335: 2433153, 5336: 2433209, 5377: 
[2025-06-05 00:07:16] 2025-06-04 22:02:02,909 | INFO     | --------------------------------------------------
[2025-06-05 00:07:16] 2025-06-04 22:02:02,909 | INFO     | 
[2025-06-05 00:07:16] 2025-06-04 22:02:02,909 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-06-05 00:07:16] 2025-06-04 22:02:03,007 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,010 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,010 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,010 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,011 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:07:16] 2025-06-04 22:02:03,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,014 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:07:16] 2025-06-04 22:02:03,014 | INFO     | job 6679435808 has completed (purged errors)
[2025-06-05 00:07:16] 2025-06-04 22:02:03,014 | INFO     | overall cleanup function is called
[2025-06-05 00:07:16] 2025-06-04 22:02:04,030 | INFO     | --- collectZombieJob: --- 10, [2680214]
[2025-06-05 00:07:16] 2025-06-04 22:02:04,030 | INFO     | zombie collector waiting for pid 2680214
[2025-06-05 00:07:16] 2025-06-04 22:02:04,030 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:07:16] 2025-06-04 22:02:04,030 | INFO     | collected zombie processes
[2025-06-05 00:07:16] 2025-06-04 22:02:04,030 | INFO     | will attempt to kill all subprocesses of pid=2680214
[2025-06-05 00:07:16] 2025-06-04 22:02:05,147 | INFO     | process IDs to be killed: [2680214] (in reverse order)
[2025-06-05 00:07:16] 2025-06-04 22:02:05,593 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:07:16] 2025-06-04 22:02:05,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:07:16] 2025-06-04 22:02:05,705 | INFO     | did not find any defunct processes belonging to 2680214
[2025-06-05 00:07:16] 2025-06-04 22:02:05,822 | INFO     | did not find any defunct processes belonging to 2680214
[2025-06-05 00:07:16] 2025-06-04 22:02:05,822 | INFO     | ready for new job
[2025-06-05 00:07:16] 2025-06-04 22:02:05,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:07:16] 2025-06-04 22:02:05,857 | INFO     | **************************************
[2025-06-05 00:07:16] 2025-06-04 22:02:05,858 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:07:16] 2025-06-04 22:02:05,858 | INFO     | **************************************
[2025-06-05 00:07:16] 2025-06-04 22:02:05,858 | INFO     | 
[2025-06-05 00:07:16] 2025-06-04 22:02:05,892 | INFO     | architecture information:
[2025-06-05 00:07:16] 2025-06-04 22:02:05,916 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:07:16] 2025-06-04 22:02:06,010 | INFO     | cat /etc/os-release:
[2025-06-05 00:07:16] NAME="CentOS Linux"
[2025-06-05 00:07:16] VERSION="7 (Core)"
[2025-06-05 00:07:16] ID="centos"
[2025-06-05 00:07:16] ID_LIKE="rhel fedora"
[2025-06-05 00:07:16] VERSION_ID="7"
[2025-06-05 00:07:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:07:16] ANSI_COLOR="0;31"
[2025-06-05 00:07:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:07:16] HOME_URL="https://www.centos.org/"
[2025-06-05 00:07:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:07:16] 
[2025-06-05 00:07:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:07:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:07:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:07:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:07:16] 
[2025-06-05 00:07:16] 2025-06-04 22:02:06,010 | INFO     | **************************************
[2025-06-05 00:07:16] 2025-06-04 22:02:06,513 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-06-05 00:07:16] 2025-06-04 22:02:06,584 | INFO     | sufficient remaining disk space (1660144320512 B)
[2025-06-05 00:07:16] 2025-06-04 22:02:06,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:07:16] 2025-06-04 22:02:06,586 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:07:16] 2025-06-04 22:02:06,586 | INFO     | update_server=False
[2025-06-05 00:07:16] 2025-06-04 22:02:06,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:07:16] 2025-06-04 22:02:06,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:07:16] 2025-06-04 22:02:06,702 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 00:07:16] 2025-06-04 22:02:06,702 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 00:07:16] 2025-06-04 22:02:06,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:07:16] 2025-06-04 22:02:06,702 | INFO     | will abort loop
[2025-06-05 00:07:16] 2025-06-04 22:02:06,994 | INFO     | PID=2633814 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 00:07:16] 2025-06-04 22:02:06,994 | INFO     | .. there are 97 such processes running
[2025-06-05 00:07:16] 2025-06-04 22:02:06,994 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:07:16] 2025-06-04 22:02:06,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:07:16] 2025-06-04 22:02:06,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:07:16] 2025-06-04 22:02:07,223 | INFO     | all job control threads have been joined
[2025-06-05 00:07:16] 2025-06-04 22:02:07,395 | INFO     | all data control threads have been joined
[2025-06-05 00:07:16] 2025-06-04 22:02:07,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:07:16] 2025-06-04 22:02:07,593 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:07,708 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:07,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:07:16] 2025-06-04 22:02:07,814 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:07,946 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:08,020 | INFO     | all payload control threads have been joined
[2025-06-05 00:07:16] 2025-06-04 22:02:08,088 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:08,229 | INFO     | [job] control thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:08,406 | INFO     | [data] control thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:08,613 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:08,630 | INFO     | [job] validate thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:08,706 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:08,768 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:09,026 | INFO     | [payload] control thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:09,037 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:09,101 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:11,547 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:17,025 | INFO     | job.realtimelogging is not enabled
[2025-06-05 00:07:16] 2025-06-04 22:02:18,030 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:07:16] 2025-06-04 22:02:18,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140373563729728)>', '<ExcThread(monitor, started 140373053650688)>']
[2025-06-05 00:07:16] 2025-06-04 22:02:19,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:07:16] 2025-06-04 22:02:19,077 | INFO     | [monitor] control thread has ended
[2025-06-05 00:07:16] 2025-06-04 22:02:23,909 | INFO     | all workflow threads have been joined
[2025-06-05 00:07:16] 2025-06-04 22:02:23,909 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:07:16] 2025-06-04 22:02:23,909 | INFO     | traces error code: 0
[2025-06-05 00:07:16] 2025-06-04 22:02:23,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:07:16] 2025-06-04 22:02:24,398 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:07:16] 2025-06-04 22:02:24,442 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:07:16] 2025-06-04 22:02:24,474 [wrapper] pilotpid: 2633814
[2025-06-05 00:07:16] 2025-06-04 22:02:24,485 [wrapper] Pilot exit status: 0
[2025-06-05 00:07:16] 2025-06-04 22:02:24,615 [wrapper] pandaids: 6679435808
[2025-06-05 00:07:16] 2025-06-04 22:02:25,102 [wrapper] cleanup supervisor_pilot 3523122 2633815
[2025-06-05 00:07:16] 2025-06-04 22:02:25,145 [wrapper] Test setup, not cleaning
[2025-06-05 00:07:16] 2025-06-04 22:02:25,173 [wrapper] apfmon messages muted
[2025-06-05 00:07:16] 2025-06-04 22:02:25,212 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:07:16] 2025-06-04 22:02:25,255 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:07:16]  *** Error codes and diagnostics ***
[2025-06-05 00:07:16]     "exeErrorCode": 0,
[2025-06-05 00:07:16]     "exeErrorDiag": "",
[2025-06-05 00:07:16]     "pilotErrorCode": 0,
[2025-06-05 00:07:16]     "pilotErrorDiag": "",
[2025-06-05 00:07:17]  *** Listing of results directory ***
[2025-06-05 00:07:17] total 387360
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc      5111 Jun  4 11:03 queuedata.json
[2025-06-05 00:07:17] -rwx------ 1 boinc boinc     37140 Jun  4 11:03 runpilot2-wrapper.sh
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:07:17] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:28 run_atlas
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:28 job.xml
[2025-06-05 00:07:17] -rw-r--r-- 2 boinc boinc 216105133 Jun  4 22:28 EVNT.45006593._001791.pool.root.1
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc      6664 Jun  4 22:28 init_data.xml
[2025-06-05 00:07:17] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:28 start_atlas.sh
[2025-06-05 00:07:17] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:28 shared
[2025-06-05 00:07:17] -rw-r--r-- 2 boinc boinc    508882 Jun  4 22:28 input.tar.gz
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:28 boinc_lockfile
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc      2525 Jun  4 22:29 pandaJob.out
[2025-06-05 00:07:17] -rw------- 1 boinc boinc    987032 Jun  4 22:30 agis_schedconf.cvmfs.json
[2025-06-05 00:07:17] -rw------- 1 boinc boinc   1598969 Jun  4 22:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:07:17] drwx------ 4 boinc boinc      4096 Jun  4 22:30 pilot3
[2025-06-05 00:07:17] -rw------- 1 boinc boinc 175013624 Jun  5 00:00 HITS.45006595._056294.pool.root.1
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc       529 Jun  5 00:00 boinc_task_state.xml
[2025-06-05 00:07:17] -rw------- 1 boinc boinc      1024 Jun  5 00:01 memory_monitor_summary.json
[2025-06-05 00:07:17] -rw------- 1 boinc boinc    367837 Jun  5 00:01 log.45006595._056294.job.log.tgz.1
[2025-06-05 00:07:17] -rw------- 1 boinc boinc        95 Jun  5 00:01 pilot_heartbeat.json
[2025-06-05 00:07:17] -rw------- 1 boinc boinc      7693 Jun  5 00:02 heartbeat.json
[2025-06-05 00:07:17] -rw------- 1 boinc boinc      5009 Jun  5 00:02 pilotlog.txt
[2025-06-05 00:07:17] -rw------- 1 boinc boinc    487025 Jun  5 00:02 log.45006595._056294.job.log.1
[2025-06-05 00:07:17] -rw------- 1 boinc boinc       357 Jun  5 00:02 output.list
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc       620 Jun  5 00:02 runtime_log
[2025-06-05 00:07:17] -rw------- 1 boinc boinc    870400 Jun  5 00:02 result.tar.gz
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc      8720 Jun  5 00:02 runtime_log.err
[2025-06-05 00:07:17] -rw------- 1 boinc boinc       662 Jun  5 00:02 8uyMDm4Czg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm40aKDmx6ePXo.diag
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc        26 Jun  5 00:07 wrapper_checkpoint.txt
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc      8192 Jun  5 00:07 boinc_mmap_file
[2025-06-05 00:07:17] -rw-r--r-- 1 boinc boinc     22564 Jun  5 00:07 stderr.txt
[2025-06-05 00:07:17] HITS file was successfully produced:
[2025-06-05 00:07:17] -rw------- 1 boinc boinc 175013624 Jun  5 00:00 shared/HITS.pool.root.1
[2025-06-05 00:07:17]  *** Contents of shared directory: ***
[2025-06-05 00:07:17] total 383332
[2025-06-05 00:07:17] -rw-r--r-- 2 boinc boinc 216105133 Jun  4 22:28 ATLAS.root_0
[2025-06-05 00:07:17] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:28 start_atlas.sh
[2025-06-05 00:07:17] -rw-r--r-- 2 boinc boinc    508882 Jun  4 22:28 input.tar.gz
[2025-06-05 00:07:17] -rw------- 1 boinc boinc 175013624 Jun  5 00:00 HITS.pool.root.1
[2025-06-05 00:07:17] -rw------- 1 boinc boinc    870400 Jun  5 00:02 result.tar.gz
00:07:19 (2595928): run_atlas exited; CPU time 34042.166825
00:07:19 (2595928): called boinc_finish(0)

</stderr_txt>
]]>

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