Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:06:09 (9809): wrapper (7.7.26015): starting
00:06:09 (9809): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 00:06:09] Arguments: --nthreads 8
[2025-06-05 00:06:09] Threads: 8
[2025-06-05 00:06:09] Checking for CVMFS
[2025-06-05 00:06:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:06:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:06:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:06:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:06:11] 2.11.2.0 3966 33774 94028 146795 1 16 17826971 25165824 3907 130560 0 18597676 99.792 20340107 2155 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 00:06:11] CVMFS is ok
[2025-06-05 00:06:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:06:11] Checking for apptainer binary...
[2025-06-05 00:06:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:06:11] Running /usr/bin/apptainer --version
[2025-06-05 00:06:11] apptainer version 1.3.2-1.el7
[2025-06-05 00:06:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:46:31] cg-vwn439.simple-grid.lan
[2025-06-05 00:46:31] apptainer works
[2025-06-05 00:46:31] Set ATHENA_PROC_NUMBER=8
[2025-06-05 00:46:31] Set ATHENA_CORE_NUMBER=8
[2025-06-05 00:46:31] Starting ATLAS job with PandaID=6679447361
[2025-06-05 00:46:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:26:54]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:26:54] 2025-06-05 02:43:48,418 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6679447361/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:26:54] 2025-06-05 02:43:48,419 | INFO     | extracted standard info from prmon json
[2025-06-05 05:26:54] 2025-06-05 02:43:48,419 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:26:54] 2025-06-05 02:43:48,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:26:54] 2025-06-05 02:43:48,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:26:54] 2025-06-05 02:43:48,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:26:54] 2025-06-05 02:43:48,425 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:26:54] 2025-06-05 02:43:48,426 | INFO     | sum of square deviations: 3871990738.0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,434 | INFO     | sum of deviations: -5191947656.00001
[2025-06-05 05:26:54] 2025-06-05 02:43:48,434 | INFO     | mean x: 1749084327.5
[2025-06-05 05:26:54] 2025-06-05 02:43:48,435 | INFO     | mean y: 2476146.5948275863
[2025-06-05 05:26:54] 2025-06-05 02:43:48,435 | INFO     | -- intersect: 2347821187.1154222
[2025-06-05 05:26:54] 2025-06-05 02:43:48,435 | INFO     | intersect: 2347821187.1154222
[2025-06-05 05:26:54] 2025-06-05 02:43:48,435 | INFO     | chi2: 2.5118877712360765
[2025-06-05 05:26:54] 2025-06-05 02:43:48,436 | INFO     | sum of square deviations: 3627000098.0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,438 | INFO     | sum of deviations: 10010261832.999998
[2025-06-05 05:26:54] 2025-06-05 02:43:48,438 | INFO     | mean x: 1749084175.0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,438 | INFO     | mean y: 2485443.22907489
[2025-06-05 05:26:54] 2025-06-05 02:43:48,438 | INFO     | -- intersect: -4824862250.905669
[2025-06-05 05:26:54] 2025-06-05 02:43:48,438 | INFO     | intersect: -4824862250.905669
[2025-06-05 05:26:54] 2025-06-05 02:43:48,439 | INFO     | chi2: 1.743266306195302
[2025-06-05 05:26:54] 2025-06-05 02:43:48,439 | INFO     | current chi2=1.743266306195302 (change=30.59935534709591 %)
[2025-06-05 05:26:54] 2025-06-05 02:43:48,439 | INFO     | sum of square deviations: 3392567795.5
[2025-06-05 05:26:54] 2025-06-05 02:43:48,441 | INFO     | sum of deviations: 9654368404.500004
[2025-06-05 05:26:54] 2025-06-05 02:43:48,442 | INFO     | mean x: 1749084022.5
[2025-06-05 05:26:54] 2025-06-05 02:43:48,442 | INFO     | mean y: 2485211.707207207
[2025-06-05 05:26:54] 2025-06-05 02:43:48,442 | INFO     | -- intersect: -4974954456.864265
[2025-06-05 05:26:54] 2025-06-05 02:43:48,442 | INFO     | intersect: -4974954456.864265
[2025-06-05 05:26:54] 2025-06-05 02:43:48,442 | INFO     | chi2: 1.743726836071395
[2025-06-05 05:26:54] 2025-06-05 02:43:48,442 | INFO     | current chi2=1.743726836071395 (change=-0.026417643389094077 %)
[2025-06-05 05:26:54] 2025-06-05 02:43:48,443 | INFO     | right removable region: 221
[2025-06-05 05:26:54] 2025-06-05 02:43:48,443 | INFO     | sum of square deviations: 3627000098.0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,445 | INFO     | sum of deviations: -43488016666.0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,445 | INFO     | mean x: 1749084480.0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,445 | INFO     | mean y: 2499779.013215859
[2025-06-05 05:26:54] 2025-06-05 02:43:48,445 | INFO     | -- intersect: 20974160369.37969
[2025-06-05 05:26:54] 2025-06-05 02:43:48,445 | INFO     | intersect: 20974160369.37969
[2025-06-05 05:26:54] 2025-06-05 02:43:48,446 | INFO     | chi2: 0.953827902565832
[2025-06-05 05:26:54] 2025-06-05 02:43:48,446 | INFO     | current chi2=0.953827902565832 (change=62.027447504294265 %)
[2025-06-05 05:26:54] 2025-06-05 02:43:48,446 | INFO     | sum of square deviations: 3392567795.5
[2025-06-05 05:26:54] 2025-06-05 02:43:48,448 | INFO     | sum of deviations: -40818680242.5
[2025-06-05 05:26:54] 2025-06-05 02:43:48,449 | INFO     | mean x: 1749084632.5
[2025-06-05 05:26:54] 2025-06-05 02:43:48,449 | INFO     | mean y: 2498008.1756756757
[2025-06-05 05:26:54] 2025-06-05 02:43:48,449 | INFO     | -- intersect: 21047125745.840622
[2025-06-05 05:26:54] 2025-06-05 02:43:48,449 | INFO     | intersect: 21047125745.840622
[2025-06-05 05:26:54] 2025-06-05 02:43:48,449 | INFO     | chi2: 0.9403569043101934
[2025-06-05 05:26:54] 2025-06-05 02:43:48,449 | INFO     | current chi2=0.9403569043101934 (change=1.4123090988847369 %)
[2025-06-05 05:26:54] 2025-06-05 02:43:48,450 | INFO     | left removable region: 20
[2025-06-05 05:26:54] 2025-06-05 02:43:48,450 | INFO     | sum of square deviations: 2518000700.0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,451 | INFO     | sum of deviations: -10172026756.999998
[2025-06-05 05:26:54] 2025-06-05 02:43:48,452 | INFO     | mean x: 1749084602.0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,452 | INFO     | mean y: 2497095.3731343285
[2025-06-05 05:26:54] 2025-06-05 02:43:48,452 | INFO     | -- intersect: 7068315374.057765
[2025-06-05 05:26:54] 2025-06-05 02:43:48,452 | INFO     | intersect: 7068315374.057765
[2025-06-05 05:26:54] 2025-06-05 02:43:48,452 | INFO     | chi2: 0.089469973357957
[2025-06-05 05:26:54] 2025-06-05 02:43:48,453 | INFO     | -- intersect: 7068315374.057765
[2025-06-05 05:26:54] 2025-06-05 02:43:48,453 | INFO     | current memory leak: -4.04 B/s (using 201 data points, chi2=0.09)
[2025-06-05 05:26:54] 2025-06-05 02:43:48,454 | INFO     | ..............................
[2025-06-05 05:26:54] 2025-06-05 02:43:48,454 | INFO     | . Timing measurements:
[2025-06-05 05:26:54] 2025-06-05 02:43:48,454 | INFO     | . get job = 0 s
[2025-06-05 05:26:54] 2025-06-05 02:43:48,454 | INFO     | . initial setup = 2 s
[2025-06-05 05:26:54] 2025-06-05 02:43:48,454 | INFO     | . payload setup = 13 s
[2025-06-05 05:26:54] 2025-06-05 02:43:48,454 | INFO     | . stage-in = 0 s
[2025-06-05 05:26:54] 2025-06-05 02:43:48,454 | INFO     | . payload execution = 14122 s
[2025-06-05 05:26:54] 2025-06-05 02:43:48,454 | INFO     | . stage-out = 4 s
[2025-06-05 05:26:54] 2025-06-05 02:43:48,454 | INFO     | . log creation = 0 s
[2025-06-05 05:26:54] 2025-06-05 02:43:48,454 | INFO     | ..............................
[2025-06-05 05:26:54] 2025-06-05 02:43:48,599 | INFO     | 
[2025-06-05 05:26:54] 2025-06-05 02:43:48,599 | INFO     | job summary report
[2025-06-05 05:26:54] 2025-06-05 02:43:48,599 | INFO     | --------------------------------------------------
[2025-06-05 05:26:54] 2025-06-05 02:43:48,599 | INFO     | PanDA job id: 6679447361
[2025-06-05 05:26:54] 2025-06-05 02:43:48,599 | INFO     | task id: 45006595
[2025-06-05 05:26:54] 2025-06-05 02:43:48,600 | INFO     | errors: (none)
[2025-06-05 05:26:54] 2025-06-05 02:43:48,600 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:26:54] 2025-06-05 02:43:48,600 | INFO     | pilot state: finished 
[2025-06-05 05:26:54] 2025-06-05 02:43:48,600 | INFO     | transexitcode: 0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,600 | INFO     | exeerrorcode: 0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,600 | INFO     | exeerrordiag: 
[2025-06-05 05:26:54] 2025-06-05 02:43:48,600 | INFO     | exitcode: 0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,600 | INFO     | exitmsg: OK
[2025-06-05 05:26:54] 2025-06-05 02:43:48,600 | INFO     | cpuconsumptiontime: 53200 s
[2025-06-05 05:26:54] 2025-06-05 02:43:48,600 | INFO     | nevents: 400
[2025-06-05 05:26:54] 2025-06-05 02:43:48,601 | INFO     | neventsw: 0
[2025-06-05 05:26:54] 2025-06-05 02:43:48,601 | INFO     | pid: 6987
[2025-06-05 05:26:54] 2025-06-05 02:43:48,601 | INFO     | pgrp: 6987
[2025-06-05 05:26:54] 2025-06-05 02:43:48,601 | INFO     | corecount: 8
[2025-06-05 05:26:54] 2025-06-05 02:43:48,601 | INFO     | event service: False
[2025-06-05 05:26:54] 2025-06-05 02:43:48,601 | INFO     | sizes: {0: 2397063, 1: 2397318, 2: 2397318, 10: 2397552, 12: 2397580, 14140: 2427374, 14141: 2427501, 14145: 2436498, 14146: 2436554, 14183: 2436724}
[2025-06-05 05:26:54] 2025-06-05 02:43:48,601 | INFO     | --------------------------------------------------
[2025-06-05 05:26:54] 2025-06-05 02:43:48,601 | INFO     | 
[2025-06-05 05:26:54] 2025-06-05 02:43:48,601 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 05:26:54] 2025-06-05 02:43:49,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,013 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:26:54] 2025-06-05 02:43:49,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,013 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:26:54] 2025-06-05 02:43:49,013 | INFO     | job 6679447361 has completed (purged errors)
[2025-06-05 05:26:54] 2025-06-05 02:43:49,013 | INFO     | overall cleanup function is called
[2025-06-05 05:26:54] 2025-06-05 02:43:50,022 | INFO     | --- collectZombieJob: --- 10, [6987]
[2025-06-05 05:26:54] 2025-06-05 02:43:50,022 | INFO     | zombie collector waiting for pid 6987
[2025-06-05 05:26:54] 2025-06-05 02:43:50,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:26:54] 2025-06-05 02:43:50,023 | INFO     | collected zombie processes
[2025-06-05 05:26:54] 2025-06-05 02:43:50,023 | INFO     | will attempt to kill all subprocesses of pid=6987
[2025-06-05 05:26:54] 2025-06-05 02:43:50,136 | INFO     | process IDs to be killed: [6987] (in reverse order)
[2025-06-05 05:26:54] 2025-06-05 02:43:50,535 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:26:54] 2025-06-05 02:43:50,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:26:54] 2025-06-05 02:43:50,540 | INFO     | did not find any defunct processes belonging to 6987
[2025-06-05 05:26:54] 2025-06-05 02:43:50,544 | INFO     | did not find any defunct processes belonging to 6987
[2025-06-05 05:26:54] 2025-06-05 02:43:50,544 | INFO     | ready for new job
[2025-06-05 05:26:54] 2025-06-05 02:43:50,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:26:54] 2025-06-05 02:43:50,547 | INFO     | **************************************
[2025-06-05 05:26:54] 2025-06-05 02:43:50,547 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:26:54] 2025-06-05 02:43:50,547 | INFO     | **************************************
[2025-06-05 05:26:54] 2025-06-05 02:43:50,547 | INFO     | 
[2025-06-05 05:26:54] 2025-06-05 02:43:50,548 | INFO     | pilot is running in a VM
[2025-06-05 05:26:54] 2025-06-05 02:43:50,548 | INFO     | architecture information:
[2025-06-05 05:26:54] 2025-06-05 02:43:50,549 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:26:54] 2025-06-05 02:43:50,581 | INFO     | cat /etc/os-release:
[2025-06-05 05:26:54] NAME="CentOS Linux"
[2025-06-05 05:26:54] VERSION="7 (Core)"
[2025-06-05 05:26:54] ID="centos"
[2025-06-05 05:26:54] ID_LIKE="rhel fedora"
[2025-06-05 05:26:54] VERSION_ID="7"
[2025-06-05 05:26:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:26:54] ANSI_COLOR="0;31"
[2025-06-05 05:26:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:26:54] HOME_URL="https://www.centos.org/"
[2025-06-05 05:26:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:26:54] 
[2025-06-05 05:26:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:26:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:26:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:26:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:26:54] 
[2025-06-05 05:26:54] 2025-06-05 02:43:50,582 | INFO     | **************************************
[2025-06-05 05:26:54] 2025-06-05 02:43:51,085 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 05:26:54] 2025-06-05 02:43:51,414 | INFO     | sufficient remaining disk space (497133027328 B)
[2025-06-05 05:26:54] 2025-06-05 02:43:51,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:26:54] 2025-06-05 02:43:51,414 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:26:54] 2025-06-05 02:43:51,414 | INFO     | update_server=False
[2025-06-05 05:26:54] 2025-06-05 02:43:51,414 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:26:54] 2025-06-05 02:43:51,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:26:54] 2025-06-05 02:43:51,656 | INFO     | aborting loop
[2025-06-05 05:26:54] 2025-06-05 02:43:51,667 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:26:54] 2025-06-05 02:43:51,923 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:26:54] 2025-06-05 02:43:51,924 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:26:54] 2025-06-05 02:43:51,924 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:26:54] 2025-06-05 02:43:52,339 | INFO     | all data control threads have been joined
[2025-06-05 05:26:54] 2025-06-05 02:43:52,420 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:52,662 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:52,762 | INFO     | all payload control threads have been joined
[2025-06-05 05:26:54] 2025-06-05 02:43:52,831 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:52,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:52,955 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:52,971 | INFO     | [job] validate thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:52,986 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:53,076 | INFO     | all job control threads have been joined
[2025-06-05 05:26:54] 2025-06-05 02:43:53,345 | INFO     | [data] control thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:53,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:26:54] 2025-06-05 02:43:53,673 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:53,768 | INFO     | [payload] control thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:53,871 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:53,884 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:53,887 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:53,895 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:26:54] 2025-06-05 02:43:54,082 | INFO     | [job] control thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:54,624 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:57,904 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:26:54] 2025-06-05 02:43:59,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140581032298304)>', '<ExcThread(monitor, started 140580805408512)>']
[2025-06-05 05:26:54] 2025-06-05 02:43:59,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:26:54] 2025-06-05 02:43:59,972 | INFO     | [monitor] control thread has ended
[2025-06-05 05:26:54] 2025-06-05 02:44:04,827 | INFO     | all workflow threads have been joined
[2025-06-05 05:26:54] 2025-06-05 02:44:04,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:26:54] 2025-06-05 02:44:04,828 | INFO     | traces error code: 0
[2025-06-05 05:26:54] 2025-06-05 02:44:04,828 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:26:54] 2025-06-05 02:44:05,142 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:26:54] 2025-06-05 02:44:05,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:26:54] 2025-06-05 02:44:05,211 [wrapper] pilotpid: 30755
[2025-06-05 05:26:54] 2025-06-05 02:44:05,247 [wrapper] Pilot exit status: 0
[2025-06-05 05:26:54] 2025-06-05 02:44:05,547 [wrapper] pandaids: 6679447361
[2025-06-05 05:26:54] 2025-06-05 02:44:06,153 [wrapper] cleanup supervisor_pilot 11769 30756
[2025-06-05 05:26:54] 2025-06-05 02:44:06,212 [wrapper] Test setup, not cleaning
[2025-06-05 05:26:54] 2025-06-05 02:44:06,321 [wrapper] apfmon messages muted
[2025-06-05 05:26:54] 2025-06-05 02:44:06,406 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:26:54] 2025-06-05 02:44:06,515 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:26:54]  *** Error codes and diagnostics ***
[2025-06-05 05:26:54]     "exeErrorCode": 0,
[2025-06-05 05:26:54]     "exeErrorDiag": "",
[2025-06-05 05:26:54]     "pilotErrorCode": 0,
[2025-06-05 05:26:54]     "pilotErrorDiag": "",
[2025-06-05 05:26:54]  *** Listing of results directory ***
[2025-06-05 05:26:54] total 393232
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc      5111 Jun  4 11:03 queuedata.json
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc    495897 Jun  4 11:04 pilot3.tar.gz
[2025-06-05 05:26:54] -rwx------. 1 boinc boinc     37140 Jun  4 11:04 runpilot2-wrapper.sh
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc       100 Jun  5 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:26:54] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 00:06 run_atlas
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc       105 Jun  5 00:06 job.xml
[2025-06-05 05:26:54] -rw-r--r--. 2 boinc boinc 214325726 Jun  5 00:06 EVNT.45006593._000764.pool.root.1
[2025-06-05 05:26:54] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:06 start_atlas.sh
[2025-06-05 05:26:54] drwxrwx--x. 2 boinc boinc        68 Jun  5 00:06 shared
[2025-06-05 05:26:54] -rw-r--r--. 2 boinc boinc    508873 Jun  5 00:06 input.tar.gz
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc      6392 Jun  5 00:06 init_data.xml
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc         0 Jun  5 00:06 boinc_lockfile
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc      2524 Jun  5 00:46 pandaJob.out
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc    987032 Jun  5 00:47 agis_schedconf.cvmfs.json
[2025-06-05 05:26:54] drwx------. 4 boinc boinc      4096 Jun  5 00:47 pilot3
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc 181306261 Jun  5 04:42 HITS.45006595._056321.pool.root.1
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc       531 Jun  5 04:42 boinc_task_state.xml
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc      1017 Jun  5 04:43 memory_monitor_summary.json
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc   1598969 Jun  5 04:43 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc    388842 Jun  5 04:43 log.45006595._056321.job.log.tgz.1
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc        95 Jun  5 04:43 pilot_heartbeat.json
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc      7685 Jun  5 04:43 heartbeat.json
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc      4416 Jun  5 04:44 pilotlog.txt
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc   1220655 Jun  5 04:44 log.45006595._056321.job.log.1
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc       357 Jun  5 04:44 output.list
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc       620 Jun  5 04:44 runtime_log
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc   1628160 Jun  5 04:44 result.tar.gz
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc      8659 Jun  5 04:44 runtime_log.err
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc       657 Jun  5 04:44 ErkLDmTEzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5unKDmbiGALo.diag
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc      8192 Jun  5 05:26 boinc_mmap_file
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc        28 Jun  5 05:26 wrapper_checkpoint.txt
[2025-06-05 05:26:54] -rw-r--r--. 1 boinc boinc     20500 Jun  5 05:26 stderr.txt
[2025-06-05 05:26:54] HITS file was successfully produced:
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc 181306261 Jun  5 04:42 shared/HITS.pool.root.1
[2025-06-05 05:26:54]  *** Contents of shared directory: ***
[2025-06-05 05:26:54] total 388472
[2025-06-05 05:26:54] -rw-r--r--. 2 boinc boinc 214325726 Jun  5 00:06 ATLAS.root_0
[2025-06-05 05:26:54] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:06 start_atlas.sh
[2025-06-05 05:26:54] -rw-r--r--. 2 boinc boinc    508873 Jun  5 00:06 input.tar.gz
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc 181306261 Jun  5 04:42 HITS.pool.root.1
[2025-06-05 05:26:54] -rw-------. 1 boinc boinc   1628160 Jun  5 04:44 result.tar.gz
05:26:56 (9809): run_atlas exited; CPU time 53381.611589
05:26:56 (9809): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN