Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:12:55 (84628): wrapper (7.7.26015): starting
09:12:55 (84628): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 09:12:55] Arguments: --nthreads 9
[2025-06-04 09:12:55] Threads: 9
[2025-06-04 09:12:55] Checking for CVMFS
[2025-06-04 09:12:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:12:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:12:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:12:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:12:56] 2.11.2.0 6627 28827 225752 146780 2 232 15191231 18432001 7809 130560 0 74544848 99.472 77855581 31501 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:12:56] CVMFS is ok
[2025-06-04 09:12:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:12:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:12:56] Further information can be found at the LHC@home message board.
[2025-06-04 09:12:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:12:56] Checking for apptainer binary...
[2025-06-04 09:12:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:12:56] Running /usr/bin/apptainer --version
[2025-06-04 09:12:56] apptainer version 1.3.2-1.el7
[2025-06-04 09:12:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:12:56] c-210-35-1.aglt2.org
[2025-06-04 09:12:56] apptainer works
[2025-06-04 09:12:56] Set ATHENA_PROC_NUMBER=9
[2025-06-04 09:12:56] Set ATHENA_CORE_NUMBER=9
[2025-06-04 09:12:57] Starting ATLAS job with PandaID=6679446599
[2025-06-04 09:12:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:44:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:44:42]  lfn=log.45006595._056318.job.log.tgz.1
[2025-06-04 10:44:42]  mtime=0
[2025-06-04 10:44:42]  protocol_id=None
[2025-06-04 10:44:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:44:42]  replicas=None
[2025-06-04 10:44:42]  scope=mc23_13p6TeV
[2025-06-04 10:44:42]  status=None
[2025-06-04 10:44:42]  status_code=0
[2025-06-04 10:44:42]  storage_token=
[2025-06-04 10:44:42]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6679446599/log.45006595._056318.job.log.tgz.1
[2025-06-04 10:44:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/e5/log.45006595._056318.job.log.tgz.1
[2025-06-04 10:44:42]  workdir=None
[2025-06-04 10:44:42] ]
[2025-06-04 10:44:42] 2025-06-04 14:44:13,006 | INFO     | transferring file log.45006595._056318.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6679446599/log.45006595._056318.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:44:42] 2025-06-04 14:44:13,007 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6679446599/log.45006595._056318.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._056318.job
[2025-06-04 10:44:42] 2025-06-04 14:44:13,036 | INFO     | adding to output.list: log.45006595._056318.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/e5/log.45006595._056318.job.log.tg
[2025-06-04 10:44:42] 2025-06-04 14:44:13,037 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:44:42] 2025-06-04 14:44:13,037 | INFO     | summary of transferred files:
[2025-06-04 10:44:42] 2025-06-04 14:44:13,037 | INFO     |  -- lfn=log.45006595._056318.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:44:42] 2025-06-04 14:44:13,037 | INFO     | stage-out finished correctly
[2025-06-04 10:44:42] 2025-06-04 14:44:14,713 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:44:42] 2025-06-04 14:44:14,754 | INFO     | monitor loop #411: job 0:6679446599 is in state 'finished'
[2025-06-04 10:44:42] 2025-06-04 14:44:14,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:44:42] 2025-06-04 14:44:16,765 | INFO     | job 6679446599 has state=finished
[2025-06-04 10:44:42] 2025-06-04 14:44:16,765 | INFO     | preparing for final server update for job 6679446599 in state='finished'
[2025-06-04 10:44:42] 2025-06-04 14:44:16,766 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:44:42] 2025-06-04 14:44:16,766 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:44:42] 2025-06-04 14:44:16,766 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:44:42] 2025-06-04 14:44:16,766 | INFO     | job 6679446599 has finished - writing final server update
[2025-06-04 10:44:42] 2025-06-04 14:44:16,766 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:44:42] 2025-06-04 14:44:16,770 | INFO     | executing command: lscpu
[2025-06-04 10:44:42] 2025-06-04 14:44:16,864 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:44:42] 2025-06-04 14:44:17,284 | INFO     | monitor loop #412: job 0:6679446599 is in state 'finished'
[2025-06-04 10:44:42] 2025-06-04 14:44:17,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:44:42] 2025-06-04 14:44:17,506 | INFO     | PID=88269 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 10:44:42] 2025-06-04 14:44:17,507 | INFO     | .. there are 10 such processes running
[2025-06-04 10:44:42] 2025-06-04 14:44:19,787 | INFO     | monitor loop #413: job 0:6679446599 is in state 'finished'
[2025-06-04 10:44:42] 2025-06-04 14:44:19,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:44:42] 2025-06-04 14:44:22,292 | INFO     | monitor loop #414: job 0:6679446599 is in state 'finished'
[2025-06-04 10:44:42] 2025-06-04 14:44:22,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:44:42] 2025-06-04 14:44:22,608 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:44:42] 2025-06-04 14:44:22,609 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679446599/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:44:42] 2025-06-04 14:44:22,610 | INFO     | extracted standard info from prmon json
[2025-06-04 10:44:42] 2025-06-04 14:44:22,610 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:44:42] 2025-06-04 14:44:22,610 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:44:42] 2025-06-04 14:44:22,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:44:42] 2025-06-04 14:44:22,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:44:42] 2025-06-04 14:44:22,612 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:44:42] 2025-06-04 14:44:22,612 | INFO     | sum of square deviations: 170944600.5
[2025-06-04 10:44:42] 2025-06-04 14:44:22,613 | INFO     | sum of deviations: 1033136839.4999999
[2025-06-04 10:44:42] 2025-06-04 14:44:22,613 | INFO     | mean x: 1749045604.5
[2025-06-04 10:44:42] 2025-06-04 14:44:22,613 | INFO     | mean y: 2542800.1585365855
[2025-06-04 10:44:42] 2025-06-04 14:44:22,613 | INFO     | -- intersect: -10568153452.833067
[2025-06-04 10:44:42] 2025-06-04 14:44:22,613 | INFO     | intersect: -10568153452.833067
[2025-06-04 10:44:42] 2025-06-04 14:44:22,613 | INFO     | chi2: 0.004441824194891575
[2025-06-04 10:44:42] 2025-06-04 14:44:22,613 | INFO     | -- intersect: -10568153452.833067
[2025-06-04 10:44:42] 2025-06-04 14:44:22,613 | INFO     | current memory leak: 6.04 B/s (using 82 data points, chi2=0.00)
[2025-06-04 10:44:42] 2025-06-04 14:44:22,614 | INFO     | ..............................
[2025-06-04 10:44:42] 2025-06-04 14:44:22,614 | INFO     | . Timing measurements:
[2025-06-04 10:44:42] 2025-06-04 14:44:22,614 | INFO     | . get job = 0 s
[2025-06-04 10:44:42] 2025-06-04 14:44:22,614 | INFO     | . initial setup = 2 s
[2025-06-04 10:44:42] 2025-06-04 14:44:22,614 | INFO     | . payload setup = 10 s
[2025-06-04 10:44:42] 2025-06-04 14:44:22,614 | INFO     | . stage-in = 0 s
[2025-06-04 10:44:42] 2025-06-04 14:44:22,614 | INFO     | . payload execution = 5426 s
[2025-06-04 10:44:42] 2025-06-04 14:44:22,614 | INFO     | . stage-out = 0 s
[2025-06-04 10:44:42] 2025-06-04 14:44:22,614 | INFO     | . log creation = 0 s
[2025-06-04 10:44:42] 2025-06-04 14:44:22,614 | INFO     | ..............................
[2025-06-04 10:44:42] 2025-06-04 14:44:23,111 | INFO     | 
[2025-06-04 10:44:42] 2025-06-04 14:44:23,111 | INFO     | job summary report
[2025-06-04 10:44:42] 2025-06-04 14:44:23,111 | INFO     | --------------------------------------------------
[2025-06-04 10:44:42] 2025-06-04 14:44:23,111 | INFO     | PanDA job id: 6679446599
[2025-06-04 10:44:42] 2025-06-04 14:44:23,111 | INFO     | task id: 45006595
[2025-06-04 10:44:42] 2025-06-04 14:44:23,111 | INFO     | errors: (none)
[2025-06-04 10:44:42] 2025-06-04 14:44:23,111 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:44:42] 2025-06-04 14:44:23,111 | INFO     | pilot state: finished 
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | transexitcode: 0
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | exeerrorcode: 0
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | exeerrordiag: 
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | exitcode: 0
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | exitmsg: OK
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | cpuconsumptiontime: 34219 s
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | nevents: 400
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | neventsw: 0
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | pid: 94771
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | pgrp: 94771
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | corecount: 9
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | event service: False
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | sizes: {0: 2397292, 1: 2397320, 5: 2397526, 11: 2397582, 5441: 2424019, 5442: 2432960, 5444: 2433144, 5452: 2433314}
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | --------------------------------------------------
[2025-06-04 10:44:42] 2025-06-04 14:44:23,112 | INFO     | 
[2025-06-04 10:44:42] 2025-06-04 14:44:23,113 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:44:42] 2025-06-04 14:44:23,134 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,134 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:44:42] 2025-06-04 14:44:23,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:44:42] 2025-06-04 14:44:23,136 | INFO     | job 6679446599 has completed (purged errors)
[2025-06-04 10:44:42] 2025-06-04 14:44:23,136 | INFO     | overall cleanup function is called
[2025-06-04 10:44:42] 2025-06-04 14:44:24,144 | INFO     | --- collectZombieJob: --- 10, [94771]
[2025-06-04 10:44:42] 2025-06-04 14:44:24,145 | INFO     | zombie collector waiting for pid 94771
[2025-06-04 10:44:42] 2025-06-04 14:44:24,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:44:42] 2025-06-04 14:44:24,145 | INFO     | collected zombie processes
[2025-06-04 10:44:42] 2025-06-04 14:44:24,145 | INFO     | will attempt to kill all subprocesses of pid=94771
[2025-06-04 10:44:42] 2025-06-04 14:44:24,304 | INFO     | process IDs to be killed: [94771] (in reverse order)
[2025-06-04 10:44:42] 2025-06-04 14:44:24,449 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:44:42] 2025-06-04 14:44:24,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:44:42] 2025-06-04 14:44:24,457 | INFO     | did not find any defunct processes belonging to 94771
[2025-06-04 10:44:42] 2025-06-04 14:44:24,465 | INFO     | did not find any defunct processes belonging to 94771
[2025-06-04 10:44:42] 2025-06-04 14:44:24,466 | INFO     | ready for new job
[2025-06-04 10:44:42] 2025-06-04 14:44:24,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:44:42] 2025-06-04 14:44:24,468 | INFO     | **************************************
[2025-06-04 10:44:42] 2025-06-04 14:44:24,468 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:44:42] 2025-06-04 14:44:24,468 | INFO     | **************************************
[2025-06-04 10:44:42] 2025-06-04 14:44:24,468 | INFO     | 
[2025-06-04 10:44:42] 2025-06-04 14:44:24,472 | INFO     | architecture information:
[2025-06-04 10:44:42] 2025-06-04 14:44:24,473 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:44:42] 2025-06-04 14:44:24,494 | INFO     | cat /etc/os-release:
[2025-06-04 10:44:42] NAME="CentOS Linux"
[2025-06-04 10:44:42] VERSION="7 (Core)"
[2025-06-04 10:44:42] ID="centos"
[2025-06-04 10:44:42] ID_LIKE="rhel fedora"
[2025-06-04 10:44:42] VERSION_ID="7"
[2025-06-04 10:44:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:44:42] ANSI_COLOR="0;31"
[2025-06-04 10:44:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:44:42] HOME_URL="https://www.centos.org/"
[2025-06-04 10:44:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:44:42] 
[2025-06-04 10:44:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:44:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:44:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:44:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:44:42] 
[2025-06-04 10:44:42] 2025-06-04 14:44:24,494 | INFO     | **************************************
[2025-06-04 10:44:42] 2025-06-04 14:44:24,997 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:44:42] 2025-06-04 14:44:25,010 | INFO     | sufficient remaining disk space (56247713792 B)
[2025-06-04 10:44:42] 2025-06-04 14:44:25,011 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:44:42] 2025-06-04 14:44:25,011 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:44:42] 2025-06-04 14:44:25,011 | INFO     | update_server=False
[2025-06-04 10:44:42] 2025-06-04 14:44:25,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:44:42] 2025-06-04 14:44:25,053 | INFO     | all payload control threads have been joined
[2025-06-04 10:44:42] 2025-06-04 14:44:25,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:44:42] 2025-06-04 14:44:25,519 | INFO     | all data control threads have been joined
[2025-06-04 10:44:42] 2025-06-04 14:44:25,530 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:44:42] 2025-06-04 14:44:25,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:44:42] 2025-06-04 14:44:25,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:44:42] 2025-06-04 14:44:25,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:44:42] 2025-06-04 14:44:25,801 | INFO     | aborting loop
[2025-06-04 10:44:42] 2025-06-04 14:44:25,854 | INFO     | all job control threads have been joined
[2025-06-04 10:44:42] 2025-06-04 14:44:26,019 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:26,059 | INFO     | [payload] control thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:26,153 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:44:42] 2025-06-04 14:44:26,349 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:26,524 | INFO     | [data] control thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:26,632 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:26,806 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:26,860 | INFO     | [job] control thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:27,020 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:27,296 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:27,386 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:27,511 | INFO     | [job] validate thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:27,543 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:27,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:44:42] 2025-06-04 14:44:28,158 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:28,684 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:29,313 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:35,182 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:44:42] 2025-06-04 14:44:36,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:44:42] 2025-06-04 14:44:36,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171050411840)>', '<ExcThread(monitor, started 140170443597568)>']
[2025-06-04 10:44:42] 2025-06-04 14:44:37,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:44:42] 2025-06-04 14:44:37,592 | INFO     | [monitor] control thread has ended
[2025-06-04 10:44:42] 2025-06-04 14:44:41,741 | INFO     | all workflow threads have been joined
[2025-06-04 10:44:42] 2025-06-04 14:44:41,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:44:42] 2025-06-04 14:44:41,742 | INFO     | traces error code: 0
[2025-06-04 10:44:42] 2025-06-04 14:44:41,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:44:42] 2025-06-04 14:44:41,912 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:44:42] 2025-06-04 14:44:41,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:44:42] 2025-06-04 14:44:41,980 [wrapper] pilotpid: 88269
[2025-06-04 10:44:42] 2025-06-04 14:44:41,983 [wrapper] Pilot exit status: 0
[2025-06-04 10:44:42] 2025-06-04 14:44:42,011 [wrapper] pandaids: 6679446599
[2025-06-04 10:44:42] 2025-06-04 14:44:42,309 [wrapper] cleanup supervisor_pilot 225897 88270
[2025-06-04 10:44:42] 2025-06-04 14:44:42,312 [wrapper] Test setup, not cleaning
[2025-06-04 10:44:42] 2025-06-04 14:44:42,315 [wrapper] apfmon messages muted
[2025-06-04 10:44:42] 2025-06-04 14:44:42,318 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:44:42] 2025-06-04 14:44:42,321 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:44:42]  *** Error codes and diagnostics ***
[2025-06-04 10:44:42]     "exeErrorCode": 0,
[2025-06-04 10:44:42]     "exeErrorDiag": "",
[2025-06-04 10:44:42]     "pilotErrorCode": 0,
[2025-06-04 10:44:42]     "pilotErrorDiag": "",
[2025-06-04 10:44:42]  *** Listing of results directory ***
[2025-06-04 10:44:42] total 388824
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 05:03 queuedata.json
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 05:04 pilot3.tar.gz
[2025-06-04 10:44:42] -rwx------ 1 boincer umatlas     37140 Jun  4 05:04 runpilot2-wrapper.sh
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:44:42] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:12 run_atlas
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:12 job.xml
[2025-06-04 10:44:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:12 start_atlas.sh
[2025-06-04 10:44:42] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:12 shared
[2025-06-04 10:44:42] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 09:12 input.tar.gz
[2025-06-04 10:44:42] -rw-r--r-- 2 boincer umatlas 215997541 Jun  4 09:12 EVNT.45006593._001904.pool.root.1
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:12 boinc_lockfile
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 09:12 pandaJob.out
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas    986811 Jun  4 09:13 agis_schedconf.cvmfs.json
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas   1598969 Jun  4 09:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:44:42] drwx------ 4 boincer umatlas      4096 Jun  4 09:13 pilot3
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas      6353 Jun  4 10:37 init_data.xml
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:43 boinc_task_state.xml
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas 176607731 Jun  4 10:43 HITS.45006595._056318.pool.root.1
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas      1052 Jun  4 10:44 memory_monitor_summary.json
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas    326076 Jun  4 10:44 log.45006595._056318.job.log.tgz.1
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas      7743 Jun  4 10:44 heartbeat.json
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas        95 Jun  4 10:44 pilot_heartbeat.json
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:44 boinc_mmap_file
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:44 wrapper_checkpoint.txt
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas      4425 Jun  4 10:44 pilotlog.txt
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas    530700 Jun  4 10:44 log.45006595._056318.job.log.1
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas       357 Jun  4 10:44 output.list
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:44 runtime_log
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas    880640 Jun  4 10:44 result.tar.gz
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 10:44 runtime_log.err
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas       659 Jun  4 10:44 5ThLDmTEzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2unKDm1Hn6ym.diag
[2025-06-04 10:44:42] -rw-r--r-- 1 boincer umatlas     21635 Jun  4 10:44 stderr.txt
[2025-06-04 10:44:42] HITS file was successfully produced:
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas 176607731 Jun  4 10:43 shared/HITS.pool.root.1
[2025-06-04 10:44:42]  *** Contents of shared directory: ***
[2025-06-04 10:44:42] total 384792
[2025-06-04 10:44:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:12 start_atlas.sh
[2025-06-04 10:44:42] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 09:12 input.tar.gz
[2025-06-04 10:44:42] -rw-r--r-- 2 boincer umatlas 215997541 Jun  4 09:12 ATLAS.root_0
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas 176607731 Jun  4 10:43 HITS.pool.root.1
[2025-06-04 10:44:42] -rw------- 1 boincer umatlas    880640 Jun  4 10:44 result.tar.gz
10:44:43 (84628): run_atlas exited; CPU time 34281.025034
10:44:43 (84628): called boinc_finish(0)

</stderr_txt>
]]>

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