Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:10:45 (29008): wrapper (7.7.26015): starting
09:10:45 (29008): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:10:45] Arguments: --nthreads 12
[2025-06-04 09:10:45] Threads: 12
[2025-06-04 09:10:45] Checking for CVMFS
[2025-06-04 09:10:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:10:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:10:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:10:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:10:45] 2.11.2.0 2991 35678 85924 146780 3 58 17716241 20275200 1 130560 0 16732540 99.983 6667057 7929 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:10:45] CVMFS is ok
[2025-06-04 09:10:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:10:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:10:45] Further information can be found at the LHC@home message board.
[2025-06-04 09:10:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:10:45] Checking for apptainer binary...
[2025-06-04 09:10:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:10:45] Running /usr/bin/apptainer --version
[2025-06-04 09:10:45] apptainer version 1.3.2-1.el7
[2025-06-04 09:10:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:10:47] c-205-32.aglt2.org
[2025-06-04 09:10:47] apptainer works
[2025-06-04 09:10:47] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:10:47] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:10:47] Starting ATLAS job with PandaID=6678999206
[2025-06-04 09:10:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:16:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:16:37]  filesize=349374
[2025-06-04 10:16:37]  filetype=log
[2025-06-04 10:16:37]  guid=135ac968-659d-463f-b92e-36df3f82e821
[2025-06-04 10:16:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:16:37]  is_altstaged=None
[2025-06-04 10:16:37]  is_tar=False
[2025-06-04 10:16:37]  lfn=log.45006595._055761.job.log.tgz.1
[2025-06-04 10:16:37]  mtime=0
[2025-06-04 10:16:37]  protocol_id=None
[2025-06-04 10:16:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:16:37]  replicas=None
[2025-06-04 10:16:37]  scope=mc23_13p6TeV
[2025-06-04 10:16:37]  status=None
[2025-06-04 10:16:37]  status_code=0
[2025-06-04 10:16:37]  storage_token=
[2025-06-04 10:16:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678999206/log.45006595._055761.job.log.tgz.1
[2025-06-04 10:16:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/d3/log.45006595._055761.job.log.tgz.1
[2025-06-04 10:16:37]  workdir=None
[2025-06-04 10:16:37] ]
[2025-06-04 10:16:37] 2025-06-04 14:16:11,490 | INFO     | transferring file log.45006595._055761.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678999206/log.45006595._055761.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:16:37] 2025-06-04 14:16:11,490 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678999206/log.45006595._055761.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055761.job
[2025-06-04 10:16:37] 2025-06-04 14:16:11,511 | INFO     | adding to output.list: log.45006595._055761.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/d3/log.45006595._055761.job.log.tg
[2025-06-04 10:16:37] 2025-06-04 14:16:11,512 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:16:37] 2025-06-04 14:16:11,512 | INFO     | summary of transferred files:
[2025-06-04 10:16:37] 2025-06-04 14:16:11,512 | INFO     |  -- lfn=log.45006595._055761.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:16:37] 2025-06-04 14:16:11,513 | INFO     | stage-out finished correctly
[2025-06-04 10:16:37] 2025-06-04 14:16:11,599 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:16:37] 2025-06-04 14:16:12,608 | INFO     | job 6678999206 has state=finished
[2025-06-04 10:16:37] 2025-06-04 14:16:12,609 | INFO     | preparing for final server update for job 6678999206 in state='finished'
[2025-06-04 10:16:37] 2025-06-04 14:16:12,609 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:16:37] 2025-06-04 14:16:12,610 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:16:37] 2025-06-04 14:16:12,610 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:16:37] 2025-06-04 14:16:12,610 | INFO     | job 6678999206 has finished - writing final server update
[2025-06-04 10:16:37] 2025-06-04 14:16:12,610 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:16:37] 2025-06-04 14:16:12,612 | INFO     | executing command: lscpu
[2025-06-04 10:16:37] 2025-06-04 14:16:12,639 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:16:37] 2025-06-04 14:16:13,494 | INFO     | monitor loop #296: job 0:6678999206 is in state 'finished'
[2025-06-04 10:16:37] 2025-06-04 14:16:13,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:16:37] 2025-06-04 14:16:15,997 | INFO     | monitor loop #297: job 0:6678999206 is in state 'finished'
[2025-06-04 10:16:37] 2025-06-04 14:16:15,998 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:16:37] 2025-06-04 14:16:17,311 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 10:16:37] 2025-06-04 14:16:17,311 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678999206/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:16:37] 2025-06-04 14:16:17,313 | INFO     | extracted standard info from prmon json
[2025-06-04 10:16:37] 2025-06-04 14:16:17,313 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:16:37] 2025-06-04 14:16:17,313 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:16:37] 2025-06-04 14:16:17,313 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:16:37] 2025-06-04 14:16:17,314 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:16:37] 2025-06-04 14:16:17,316 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:16:37] 2025-06-04 14:16:17,316 | INFO     | sum of square deviations: 57407588.0
[2025-06-04 10:16:37] 2025-06-04 14:16:17,317 | INFO     | sum of deviations: 71414896.00000012
[2025-06-04 10:16:37] 2025-06-04 14:16:17,317 | INFO     | mean x: 1749044703.0
[2025-06-04 10:16:37] 2025-06-04 14:16:17,317 | INFO     | mean y: 2668322.754385965
[2025-06-04 10:16:37] 2025-06-04 14:16:17,317 | INFO     | -- intersect: -2173138916.5969014
[2025-06-04 10:16:37] 2025-06-04 14:16:17,317 | INFO     | intersect: -2173138916.5969014
[2025-06-04 10:16:37] 2025-06-04 14:16:17,318 | INFO     | chi2: 0.014512022677977292
[2025-06-04 10:16:37] 2025-06-04 14:16:17,318 | INFO     | -- intersect: -2173138916.5969014
[2025-06-04 10:16:37] 2025-06-04 14:16:17,318 | INFO     | current memory leak: 1.24 B/s (using 57 data points, chi2=0.01)
[2025-06-04 10:16:37] 2025-06-04 14:16:17,318 | INFO     | ..............................
[2025-06-04 10:16:37] 2025-06-04 14:16:17,318 | INFO     | . Timing measurements:
[2025-06-04 10:16:37] 2025-06-04 14:16:17,318 | INFO     | . get job = 0 s
[2025-06-04 10:16:37] 2025-06-04 14:16:17,319 | INFO     | . initial setup = 2 s
[2025-06-04 10:16:37] 2025-06-04 14:16:17,319 | INFO     | . payload setup = 9 s
[2025-06-04 10:16:37] 2025-06-04 14:16:17,319 | INFO     | . stage-in = 0 s
[2025-06-04 10:16:37] 2025-06-04 14:16:17,319 | INFO     | . payload execution = 3881 s
[2025-06-04 10:16:37] 2025-06-04 14:16:17,319 | INFO     | . stage-out = 0 s
[2025-06-04 10:16:37] 2025-06-04 14:16:17,319 | INFO     | . log creation = 0 s
[2025-06-04 10:16:37] 2025-06-04 14:16:17,319 | INFO     | ..............................
[2025-06-04 10:16:37] 2025-06-04 14:16:17,407 | INFO     | 
[2025-06-04 10:16:37] 2025-06-04 14:16:17,407 | INFO     | job summary report
[2025-06-04 10:16:37] 2025-06-04 14:16:17,407 | INFO     | --------------------------------------------------
[2025-06-04 10:16:37] 2025-06-04 14:16:17,407 | INFO     | PanDA job id: 6678999206
[2025-06-04 10:16:37] 2025-06-04 14:16:17,408 | INFO     | task id: 45006595
[2025-06-04 10:16:37] 2025-06-04 14:16:17,408 | INFO     | errors: (none)
[2025-06-04 10:16:37] 2025-06-04 14:16:17,408 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:16:37] 2025-06-04 14:16:17,408 | INFO     | pilot state: finished 
[2025-06-04 10:16:37] 2025-06-04 14:16:17,408 | INFO     | transexitcode: 0
[2025-06-04 10:16:37] 2025-06-04 14:16:17,408 | INFO     | exeerrorcode: 0
[2025-06-04 10:16:37] 2025-06-04 14:16:17,409 | INFO     | exeerrordiag: 
[2025-06-04 10:16:37] 2025-06-04 14:16:17,409 | INFO     | exitcode: 0
[2025-06-04 10:16:37] 2025-06-04 14:16:17,409 | INFO     | exitmsg: OK
[2025-06-04 10:16:37] 2025-06-04 14:16:17,409 | INFO     | cpuconsumptiontime: 41272 s
[2025-06-04 10:16:37] 2025-06-04 14:16:17,409 | INFO     | nevents: 400
[2025-06-04 10:16:37] 2025-06-04 14:16:17,409 | INFO     | neventsw: 0
[2025-06-04 10:16:37] 2025-06-04 14:16:17,410 | INFO     | pid: 6946
[2025-06-04 10:16:37] 2025-06-04 14:16:17,410 | INFO     | pgrp: 6946
[2025-06-04 10:16:37] 2025-06-04 14:16:17,410 | INFO     | corecount: 12
[2025-06-04 10:16:37] 2025-06-04 14:16:17,410 | INFO     | event service: False
[2025-06-04 10:16:37] 2025-06-04 14:16:17,410 | INFO     | sizes: {0: 2397289, 1: 2397289, 5: 2397523, 11: 2397579, 3894: 2423229, 3896: 2432354, 3901: 2432468}
[2025-06-04 10:16:37] 2025-06-04 14:16:17,410 | INFO     | --------------------------------------------------
[2025-06-04 10:16:37] 2025-06-04 14:16:17,411 | INFO     | 
[2025-06-04 10:16:37] 2025-06-04 14:16:17,411 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:16:37] 2025-06-04 14:16:17,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,439 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:16:37] 2025-06-04 14:16:17,439 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,439 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:16:37] 2025-06-04 14:16:17,439 | INFO     | job 6678999206 has completed (purged errors)
[2025-06-04 10:16:37] 2025-06-04 14:16:17,440 | INFO     | overall cleanup function is called
[2025-06-04 10:16:37] 2025-06-04 14:16:18,448 | INFO     | --- collectZombieJob: --- 10, [6946]
[2025-06-04 10:16:37] 2025-06-04 14:16:18,448 | INFO     | zombie collector waiting for pid 6946
[2025-06-04 10:16:37] 2025-06-04 14:16:18,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:16:37] 2025-06-04 14:16:18,448 | INFO     | collected zombie processes
[2025-06-04 10:16:37] 2025-06-04 14:16:18,448 | INFO     | will attempt to kill all subprocesses of pid=6946
[2025-06-04 10:16:37] 2025-06-04 14:16:18,541 | INFO     | process IDs to be killed: [6946] (in reverse order)
[2025-06-04 10:16:37] 2025-06-04 14:16:18,594 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:16:37] 2025-06-04 14:16:18,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:16:37] 2025-06-04 14:16:18,598 | INFO     | did not find any defunct processes belonging to 6946
[2025-06-04 10:16:37] 2025-06-04 14:16:18,601 | INFO     | did not find any defunct processes belonging to 6946
[2025-06-04 10:16:37] 2025-06-04 14:16:18,602 | INFO     | ready for new job
[2025-06-04 10:16:37] 2025-06-04 14:16:18,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:16:37] 2025-06-04 14:16:18,603 | INFO     | **************************************
[2025-06-04 10:16:37] 2025-06-04 14:16:18,603 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:16:37] 2025-06-04 14:16:18,603 | INFO     | **************************************
[2025-06-04 10:16:37] 2025-06-04 14:16:18,603 | INFO     | 
[2025-06-04 10:16:37] 2025-06-04 14:16:18,604 | INFO     | architecture information:
[2025-06-04 10:16:37] 2025-06-04 14:16:18,605 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:16:37] 2025-06-04 14:16:18,619 | INFO     | cat /etc/os-release:
[2025-06-04 10:16:37] NAME="CentOS Linux"
[2025-06-04 10:16:37] VERSION="7 (Core)"
[2025-06-04 10:16:37] ID="centos"
[2025-06-04 10:16:37] ID_LIKE="rhel fedora"
[2025-06-04 10:16:37] VERSION_ID="7"
[2025-06-04 10:16:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:16:37] ANSI_COLOR="0;31"
[2025-06-04 10:16:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:16:37] HOME_URL="https://www.centos.org/"
[2025-06-04 10:16:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:16:37] 
[2025-06-04 10:16:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:16:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:16:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:16:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:16:37] 
[2025-06-04 10:16:37] 2025-06-04 14:16:18,620 | INFO     | **************************************
[2025-06-04 10:16:37] 2025-06-04 14:16:19,122 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:16:37] 2025-06-04 14:16:19,138 | INFO     | sufficient remaining disk space (29418848256 B)
[2025-06-04 10:16:37] 2025-06-04 14:16:19,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:16:37] 2025-06-04 14:16:19,139 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:16:37] 2025-06-04 14:16:19,139 | INFO     | update_server=False
[2025-06-04 10:16:37] 2025-06-04 14:16:19,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:16:37] 2025-06-04 14:16:19,140 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:16:37] 2025-06-04 14:16:19,506 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:16:37] 2025-06-04 14:16:19,506 | INFO     | aborting loop
[2025-06-04 10:16:37] 2025-06-04 14:16:19,577 | INFO     | all data control threads have been joined
[2025-06-04 10:16:37] 2025-06-04 14:16:19,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:16:37] 2025-06-04 14:16:19,969 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:16:37] 2025-06-04 14:16:19,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:16:37] 2025-06-04 14:16:19,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:16:37] 2025-06-04 14:16:20,144 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:20,145 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:20,159 | INFO     | [job] validate thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:20,283 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:20,404 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:20,415 | INFO     | all payload control threads have been joined
[2025-06-04 10:16:37] 2025-06-04 14:16:20,428 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:20,512 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:20,582 | INFO     | [data] control thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:20,742 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:20,798 | INFO     | all job control threads have been joined
[2025-06-04 10:16:37] 2025-06-04 14:16:20,917 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:21,418 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:21,421 | INFO     | [payload] control thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:21,616 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:21,802 | INFO     | [job] control thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:22,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:16:37] 2025-06-04 14:16:26,195 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:29,296 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:16:37] 2025-06-04 14:16:30,301 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:16:37] 2025-06-04 14:16:32,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140065089787712)>', '<ExcThread(monitor, started 140064520664832)>']
[2025-06-04 10:16:37] 2025-06-04 14:16:33,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:16:37] 2025-06-04 14:16:33,034 | INFO     | [monitor] control thread has ended
[2025-06-04 10:16:37] 2025-06-04 14:16:37,181 | INFO     | all workflow threads have been joined
[2025-06-04 10:16:37] 2025-06-04 14:16:37,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:16:37] 2025-06-04 14:16:37,192 | INFO     | traces error code: 0
[2025-06-04 10:16:37] 2025-06-04 14:16:37,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:16:37] 2025-06-04 14:16:37,282 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:16:37] 2025-06-04 14:16:37,285 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:16:37] 2025-06-04 14:16:37,289 [wrapper] pilotpid: 32596
[2025-06-04 10:16:37] 2025-06-04 14:16:37,292 [wrapper] Pilot exit status: 0
[2025-06-04 10:16:37] 2025-06-04 14:16:37,306 [wrapper] pandaids: 6678999206
[2025-06-04 10:16:37] 2025-06-04 14:16:37,345 [wrapper] cleanup supervisor_pilot 14321 32597
[2025-06-04 10:16:37] 2025-06-04 14:16:37,349 [wrapper] Test setup, not cleaning
[2025-06-04 10:16:37] 2025-06-04 14:16:37,352 [wrapper] apfmon messages muted
[2025-06-04 10:16:37] 2025-06-04 14:16:37,356 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:16:37] 2025-06-04 14:16:37,359 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:16:37]  *** Error codes and diagnostics ***
[2025-06-04 10:16:37]     "exeErrorCode": 0,
[2025-06-04 10:16:37]     "exeErrorDiag": "",
[2025-06-04 10:16:37]     "pilotErrorCode": 0,
[2025-06-04 10:16:37]     "pilotErrorDiag": "",
[2025-06-04 10:16:37]  *** Listing of results directory ***
[2025-06-04 10:16:37] total 390796
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:38 queuedata.json
[2025-06-04 10:16:37] -rwx------ 1 boincer umatlas     37140 Jun  4 04:39 runpilot2-wrapper.sh
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:16:37] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:10 run_atlas
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:10 job.xml
[2025-06-04 10:16:37] -rw-r--r-- 2 boincer umatlas 215521597 Jun  4 09:10 EVNT.45006593._000984.pool.root.1
[2025-06-04 10:16:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:10 start_atlas.sh
[2025-06-04 10:16:37] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:10 shared
[2025-06-04 10:16:37] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 09:10 input.tar.gz
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:10 boinc_lockfile
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas      2523 Jun  4 09:10 pandaJob.out
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas    986811 Jun  4 09:10 agis_schedconf.cvmfs.json
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas   1598969 Jun  4 09:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:16:37] drwx------ 4 boincer umatlas      4096 Jun  4 09:10 pilot3
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 10:10 init_data.xml
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas 179357113 Jun  4 10:15 HITS.45006595._055761.pool.root.1
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:15 boinc_task_state.xml
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas        95 Jun  4 10:15 pilot_heartbeat.json
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas      1048 Jun  4 10:16 memory_monitor_summary.json
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas    349374 Jun  4 10:16 log.45006595._055761.job.log.tgz.1
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas      7740 Jun  4 10:16 heartbeat.json
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:16 boinc_mmap_file
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:16 wrapper_checkpoint.txt
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas      4425 Jun  4 10:16 pilotlog.txt
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas    383294 Jun  4 10:16 log.45006595._055761.job.log.1
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas       357 Jun  4 10:16 output.list
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:16 runtime_log
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas    747520 Jun  4 10:16 result.tar.gz
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 10:16 runtime_log.err
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas       659 Jun  4 10:16 NTIMDmZpyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLonKDmPk5jpn.diag
[2025-06-04 10:16:37] -rw-r--r-- 1 boincer umatlas     21062 Jun  4 10:16 stderr.txt
[2025-06-04 10:16:37] HITS file was successfully produced:
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas 179357113 Jun  4 10:15 shared/HITS.pool.root.1
[2025-06-04 10:16:37]  *** Contents of shared directory: ***
[2025-06-04 10:16:37] total 386884
[2025-06-04 10:16:37] -rw-r--r-- 2 boincer umatlas 215521597 Jun  4 09:10 ATLAS.root_0
[2025-06-04 10:16:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:10 start_atlas.sh
[2025-06-04 10:16:37] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 09:10 input.tar.gz
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas 179357113 Jun  4 10:15 HITS.pool.root.1
[2025-06-04 10:16:37] -rw------- 1 boincer umatlas    747520 Jun  4 10:16 result.tar.gz
10:16:38 (29008): run_atlas exited; CPU time 41250.014824
10:16:38 (29008): called boinc_finish(0)

</stderr_txt>
]]>

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