Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:49:17 (5623): wrapper (7.7.26015): starting
00:49:17 (5623): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 00:49:17] Arguments: --nthreads 8
[2025-06-05 00:49:17] Threads: 8
[2025-06-05 00:49:17] Checking for CVMFS
[2025-06-05 00:49:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:49:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:49:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:49:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:49:20] 2.11.2.0 26884 33844 89240 146797 0 201 19544680 25165824 3632 130560 0 17865421 99.826 20013075 2112 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 00:49:20] CVMFS is ok
[2025-06-05 00:49:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:49:20] Checking for apptainer binary...
[2025-06-05 00:49:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:49:20] Running /usr/bin/apptainer --version
[2025-06-05 00:49:20] apptainer version 1.3.2-1.el7
[2025-06-05 00:49:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:49:22] cg-vwn403.simple-grid.lan
[2025-06-05 00:49:22] apptainer works
[2025-06-05 00:49:22] Set ATHENA_PROC_NUMBER=8
[2025-06-05 00:49:22] Set ATHENA_CORE_NUMBER=8
[2025-06-05 00:49:22] Starting ATLAS job with PandaID=6678362645
[2025-06-05 00:49:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:45:50]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:45:50] 2025-06-05 02:34:27,355 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:45:50] 2025-06-05 02:34:27,356 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:45:50] 2025-06-05 02:34:27,356 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:45:50] 2025-06-05 02:34:27,361 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:45:50] 2025-06-05 02:34:27,361 | INFO     | sum of square deviations: 3256879670.0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,363 | INFO     | sum of deviations: 3405128946.0000076
[2025-06-05 04:45:50] 2025-06-05 02:34:27,363 | INFO     | mean x: 1749084103.0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,363 | INFO     | mean y: 2469619.397260274
[2025-06-05 04:45:50] 2025-06-05 02:34:27,363 | INFO     | -- intersect: -1826230704.711969
[2025-06-05 04:45:50] 2025-06-05 02:34:27,364 | INFO     | intersect: -1826230704.711969
[2025-06-05 04:45:50] 2025-06-05 02:34:27,364 | INFO     | chi2: 2.5024632577814616
[2025-06-05 04:45:50] 2025-06-05 02:34:27,365 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 04:45:50] 2025-06-05 02:34:27,366 | INFO     | sum of deviations: 17514530022.999992
[2025-06-05 04:45:50] 2025-06-05 02:34:27,366 | INFO     | mean x: 1749083950.5
[2025-06-05 04:45:50] 2025-06-05 02:34:27,366 | INFO     | mean y: 2479302.7757009347
[2025-06-05 04:45:50] 2025-06-05 02:34:27,367 | INFO     | -- intersect: -10078410844.605274
[2025-06-05 04:45:50] 2025-06-05 02:34:27,367 | INFO     | intersect: -10078410844.605274
[2025-06-05 04:45:50] 2025-06-05 02:34:27,367 | INFO     | chi2: 1.7371000573662325
[2025-06-05 04:45:50] 2025-06-05 02:34:27,367 | INFO     | current chi2=1.7371000573662325 (change=30.584393118872626 %)
[2025-06-05 04:45:50] 2025-06-05 02:34:27,371 | INFO     | sum of square deviations: 2830787960.0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,373 | INFO     | sum of deviations: 17067346099.000006
[2025-06-05 04:45:50] 2025-06-05 02:34:27,373 | INFO     | mean x: 1749083798.0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,373 | INFO     | mean y: 2478974.846889952
[2025-06-05 04:45:50] 2025-06-05 02:34:27,373 | INFO     | -- intersect: -10543071931.275875
[2025-06-05 04:45:50] 2025-06-05 02:34:27,373 | INFO     | intersect: -10543071931.275875
[2025-06-05 04:45:50] 2025-06-05 02:34:27,373 | INFO     | chi2: 1.7381582969828133
[2025-06-05 04:45:50] 2025-06-05 02:34:27,374 | INFO     | current chi2=1.7381582969828133 (change=-0.06091989992708257 %)
[2025-06-05 04:45:50] 2025-06-05 02:34:27,374 | INFO     | right removable region: 208
[2025-06-05 04:45:50] 2025-06-05 02:34:27,374 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 04:45:50] 2025-06-05 02:34:27,376 | INFO     | sum of deviations: -33351087540.0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,376 | INFO     | mean x: 1749084255.5
[2025-06-05 04:45:50] 2025-06-05 02:34:27,376 | INFO     | mean y: 2495098.971962617
[2025-06-05 04:45:50] 2025-06-05 02:34:27,376 | INFO     | -- intersect: 19198483114.178326
[2025-06-05 04:45:50] 2025-06-05 02:34:27,376 | INFO     | intersect: 19198483114.178326
[2025-06-05 04:45:50] 2025-06-05 02:34:27,377 | INFO     | chi2: 0.920844522633557
[2025-06-05 04:45:50] 2025-06-05 02:34:27,377 | INFO     | current chi2=0.920844522633557 (change=63.202475809777745 %)
[2025-06-05 04:45:50] 2025-06-05 02:34:27,377 | INFO     | sum of square deviations: 2830787960.0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,385 | INFO     | sum of deviations: -29637116631.000004
[2025-06-05 04:45:50] 2025-06-05 02:34:27,385 | INFO     | mean x: 1749084408.0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,385 | INFO     | mean y: 2492341.698564593
[2025-06-05 04:45:50] 2025-06-05 02:34:27,385 | INFO     | -- intersect: 18314644056.996803
[2025-06-05 04:45:50] 2025-06-05 02:34:27,386 | INFO     | intersect: 18314644056.996803
[2025-06-05 04:45:50] 2025-06-05 02:34:27,386 | INFO     | chi2: 0.9071178196885306
[2025-06-05 04:45:50] 2025-06-05 02:34:27,386 | INFO     | current chi2=0.9071178196885306 (change=1.4906645592861785 %)
[2025-06-05 04:45:50] 2025-06-05 02:34:27,386 | INFO     | left removable region: 20
[2025-06-05 04:45:50] 2025-06-05 02:34:27,387 | INFO     | sum of square deviations: 2060343747.0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,388 | INFO     | sum of deviations: -509650943.5000004
[2025-06-05 04:45:50] 2025-06-05 02:34:27,388 | INFO     | mean x: 1749084377.5
[2025-06-05 04:45:50] 2025-06-05 02:34:27,388 | INFO     | mean y: 2490524.3563829786
[2025-06-05 04:45:50] 2025-06-05 02:34:27,388 | INFO     | -- intersect: 435147698.4575287
[2025-06-05 04:45:50] 2025-06-05 02:34:27,388 | INFO     | intersect: 435147698.4575287
[2025-06-05 04:45:50] 2025-06-05 02:34:27,389 | INFO     | chi2: 0.03734670722443207
[2025-06-05 04:45:50] 2025-06-05 02:34:27,389 | INFO     | -- intersect: 435147698.4575287
[2025-06-05 04:45:50] 2025-06-05 02:34:27,389 | INFO     | current memory leak: -0.25 B/s (using 188 data points, chi2=0.04)
[2025-06-05 04:45:50] 2025-06-05 02:34:27,390 | INFO     | ..............................
[2025-06-05 04:45:50] 2025-06-05 02:34:27,390 | INFO     | . Timing measurements:
[2025-06-05 04:45:50] 2025-06-05 02:34:27,390 | INFO     | . get job = 0 s
[2025-06-05 04:45:50] 2025-06-05 02:34:27,390 | INFO     | . initial setup = 2 s
[2025-06-05 04:45:50] 2025-06-05 02:34:27,391 | INFO     | . payload setup = 20 s
[2025-06-05 04:45:50] 2025-06-05 02:34:27,391 | INFO     | . stage-in = 0 s
[2025-06-05 04:45:50] 2025-06-05 02:34:27,391 | INFO     | . payload execution = 13334 s
[2025-06-05 04:45:50] 2025-06-05 02:34:27,391 | INFO     | . stage-out = 3 s
[2025-06-05 04:45:50] 2025-06-05 02:34:27,391 | INFO     | . log creation = 1 s
[2025-06-05 04:45:50] 2025-06-05 02:34:27,391 | INFO     | ..............................
[2025-06-05 04:45:50] 2025-06-05 02:34:27,700 | INFO     | 
[2025-06-05 04:45:50] 2025-06-05 02:34:27,700 | INFO     | job summary report
[2025-06-05 04:45:50] 2025-06-05 02:34:27,700 | INFO     | --------------------------------------------------
[2025-06-05 04:45:50] 2025-06-05 02:34:27,700 | INFO     | PanDA job id: 6678362645
[2025-06-05 04:45:50] 2025-06-05 02:34:27,700 | INFO     | task id: 45006595
[2025-06-05 04:45:50] 2025-06-05 02:34:27,701 | INFO     | errors: (none)
[2025-06-05 04:45:50] 2025-06-05 02:34:27,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:45:50] 2025-06-05 02:34:27,701 | INFO     | pilot state: finished 
[2025-06-05 04:45:50] 2025-06-05 02:34:27,701 | INFO     | transexitcode: 0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,701 | INFO     | exeerrorcode: 0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,701 | INFO     | exeerrordiag: 
[2025-06-05 04:45:50] 2025-06-05 02:34:27,701 | INFO     | exitcode: 0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,701 | INFO     | exitmsg: OK
[2025-06-05 04:45:50] 2025-06-05 02:34:27,701 | INFO     | cpuconsumptiontime: 50828 s
[2025-06-05 04:45:50] 2025-06-05 02:34:27,702 | INFO     | nevents: 400
[2025-06-05 04:45:50] 2025-06-05 02:34:27,702 | INFO     | neventsw: 0
[2025-06-05 04:45:50] 2025-06-05 02:34:27,702 | INFO     | pid: 20038
[2025-06-05 04:45:50] 2025-06-05 02:34:27,702 | INFO     | pgrp: 20038
[2025-06-05 04:45:50] 2025-06-05 02:34:27,702 | INFO     | corecount: 8
[2025-06-05 04:45:50] 2025-06-05 02:34:27,702 | INFO     | event service: False
[2025-06-05 04:45:50] 2025-06-05 02:34:27,702 | INFO     | sizes: {0: 2397171, 1: 2397370, 12: 2397604, 13359: 2427191, 13363: 2436132, 13364: 2436188, 13459: 2436486}
[2025-06-05 04:45:50] 2025-06-05 02:34:27,702 | INFO     | --------------------------------------------------
[2025-06-05 04:45:50] 2025-06-05 02:34:27,702 | INFO     | 
[2025-06-05 04:45:50] 2025-06-05 02:34:27,703 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-05 04:45:50] 2025-06-05 02:34:27,801 | INFO     | PID=10235 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 04:45:50] 2025-06-05 02:34:27,801 | INFO     | .. there are 9 such processes running
[2025-06-05 04:45:50] 2025-06-05 02:34:28,113 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,113 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,114 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,114 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,115 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:45:50] 2025-06-05 02:34:28,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,115 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:45:50] 2025-06-05 02:34:28,116 | INFO     | job 6678362645 has completed (purged errors)
[2025-06-05 04:45:50] 2025-06-05 02:34:28,116 | INFO     | overall cleanup function is called
[2025-06-05 04:45:50] 2025-06-05 02:34:29,126 | INFO     | --- collectZombieJob: --- 10, [20038]
[2025-06-05 04:45:50] 2025-06-05 02:34:29,126 | INFO     | zombie collector waiting for pid 20038
[2025-06-05 04:45:50] 2025-06-05 02:34:29,126 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:45:50] 2025-06-05 02:34:29,126 | INFO     | collected zombie processes
[2025-06-05 04:45:50] 2025-06-05 02:34:29,126 | INFO     | will attempt to kill all subprocesses of pid=20038
[2025-06-05 04:45:50] 2025-06-05 02:34:29,260 | INFO     | process IDs to be killed: [20038] (in reverse order)
[2025-06-05 04:45:50] 2025-06-05 02:34:30,289 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:45:50] 2025-06-05 02:34:30,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:45:50] 2025-06-05 02:34:30,294 | INFO     | did not find any defunct processes belonging to 20038
[2025-06-05 04:45:50] 2025-06-05 02:34:30,297 | INFO     | did not find any defunct processes belonging to 20038
[2025-06-05 04:45:50] 2025-06-05 02:34:30,297 | INFO     | ready for new job
[2025-06-05 04:45:50] 2025-06-05 02:34:30,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:45:50] 2025-06-05 02:34:30,300 | INFO     | **************************************
[2025-06-05 04:45:50] 2025-06-05 02:34:30,300 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:45:50] 2025-06-05 02:34:30,300 | INFO     | **************************************
[2025-06-05 04:45:50] 2025-06-05 02:34:30,300 | INFO     | 
[2025-06-05 04:45:50] 2025-06-05 02:34:30,301 | INFO     | pilot is running in a VM
[2025-06-05 04:45:50] 2025-06-05 02:34:30,301 | INFO     | architecture information:
[2025-06-05 04:45:50] 2025-06-05 02:34:30,315 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:45:50] 2025-06-05 02:34:30,567 | INFO     | cat /etc/os-release:
[2025-06-05 04:45:50] NAME="CentOS Linux"
[2025-06-05 04:45:50] VERSION="7 (Core)"
[2025-06-05 04:45:50] ID="centos"
[2025-06-05 04:45:50] ID_LIKE="rhel fedora"
[2025-06-05 04:45:50] VERSION_ID="7"
[2025-06-05 04:45:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:45:50] ANSI_COLOR="0;31"
[2025-06-05 04:45:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:45:50] HOME_URL="https://www.centos.org/"
[2025-06-05 04:45:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:45:50] 
[2025-06-05 04:45:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:45:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:45:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:45:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:45:50] 
[2025-06-05 04:45:50] 2025-06-05 02:34:30,568 | INFO     | **************************************
[2025-06-05 04:45:50] 2025-06-05 02:34:31,071 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-05 04:45:50] 2025-06-05 02:34:31,355 | INFO     | sufficient remaining disk space (497102618624 B)
[2025-06-05 04:45:50] 2025-06-05 02:34:31,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:45:50] 2025-06-05 02:34:31,356 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:45:50] 2025-06-05 02:34:31,356 | INFO     | update_server=False
[2025-06-05 04:45:50] 2025-06-05 02:34:31,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:45:50] 2025-06-05 02:34:31,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:45:50] 2025-06-05 02:34:31,362 | INFO     | aborting loop
[2025-06-05 04:45:50] 2025-06-05 02:34:31,817 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:45:50] 2025-06-05 02:34:31,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:45:50] 2025-06-05 02:34:31,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:45:50] 2025-06-05 02:34:31,987 | INFO     | all data control threads have been joined
[2025-06-05 04:45:50] 2025-06-05 02:34:32,044 | INFO     | all payload control threads have been joined
[2025-06-05 04:45:50] 2025-06-05 02:34:32,301 | INFO     | all job control threads have been joined
[2025-06-05 04:45:50] 2025-06-05 02:34:32,363 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:32,368 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:32,420 | INFO     | [job] validate thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:32,421 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:32,663 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:32,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:45:50] 2025-06-05 02:34:32,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:45:50] 2025-06-05 02:34:32,993 | INFO     | [data] control thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:33,017 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:33,050 | INFO     | [payload] control thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:33,307 | INFO     | [job] control thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:33,651 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:33,696 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:33,714 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:33,796 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:34,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:45:50] 2025-06-05 02:34:34,864 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:38,255 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:42,033 | INFO     | job.realtimelogging is not enabled
[2025-06-05 04:45:50] 2025-06-05 02:34:43,038 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:45:50] 2025-06-05 02:34:45,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140448140814144)>', '<ExcThread(monitor, started 140447552882432)>']
[2025-06-05 04:45:50] 2025-06-05 02:34:45,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:45:50] 2025-06-05 02:34:45,902 | INFO     | [monitor] control thread has ended
[2025-06-05 04:45:50] 2025-06-05 02:34:50,032 | INFO     | all workflow threads have been joined
[2025-06-05 04:45:50] 2025-06-05 02:34:50,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:45:50] 2025-06-05 02:34:50,032 | INFO     | traces error code: 0
[2025-06-05 04:45:50] 2025-06-05 02:34:50,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:45:50] 2025-06-05 02:34:50,377 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:45:50] 2025-06-05 02:34:50,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:45:50] 2025-06-05 02:34:50,565 [wrapper] pilotpid: 10235
[2025-06-05 04:45:50] 2025-06-05 02:34:50,675 [wrapper] Pilot exit status: 0
[2025-06-05 04:45:50] 2025-06-05 02:34:51,042 [wrapper] pandaids: 6678362645
[2025-06-05 04:45:50] 2025-06-05 02:34:51,753 [wrapper] cleanup supervisor_pilot  6410 10236
[2025-06-05 04:45:50] 2025-06-05 02:34:51,868 [wrapper] Test setup, not cleaning
[2025-06-05 04:45:50] 2025-06-05 02:34:51,939 [wrapper] apfmon messages muted
[2025-06-05 04:45:50] 2025-06-05 02:34:51,996 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:45:50] 2025-06-05 02:34:52,072 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:45:50]  *** Error codes and diagnostics ***
[2025-06-05 04:45:50]     "exeErrorCode": 0,
[2025-06-05 04:45:50]     "exeErrorDiag": "",
[2025-06-05 04:45:50]     "pilotErrorCode": 0,
[2025-06-05 04:45:50]     "pilotErrorDiag": "",
[2025-06-05 04:45:50]  *** Listing of results directory ***
[2025-06-05 04:45:50] total 393668
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:58 pilot3.tar.gz
[2025-06-05 04:45:50] -rwx------. 1 boinc boinc     37140 Jun  4 07:17 runpilot2-wrapper.sh
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc      5111 Jun  4 07:17 queuedata.json
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc       100 Jun  5 00:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:45:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 00:49 run_atlas
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc       105 Jun  5 00:49 job.xml
[2025-06-05 04:45:50] -rw-r--r--. 2 boinc boinc 216505080 Jun  5 00:49 EVNT.45006593._002127.pool.root.1
[2025-06-05 04:45:50] -rw-r--r--. 2 boinc boinc    508876 Jun  5 00:49 input.tar.gz
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc      6392 Jun  5 00:49 init_data.xml
[2025-06-05 04:45:50] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:49 start_atlas.sh
[2025-06-05 04:45:50] drwxrwx--x. 2 boinc boinc        68 Jun  5 00:49 shared
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc         0 Jun  5 00:49 boinc_lockfile
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc      2525 Jun  5 00:49 pandaJob.out
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc    987032 Jun  5 00:49 agis_schedconf.cvmfs.json
[2025-06-05 04:45:50] drwx------. 4 boinc boinc      4096 Jun  5 00:49 pilot3
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc 179717919 Jun  5 04:31 HITS.45006595._053140.pool.root.1
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc       531 Jun  5 04:31 boinc_task_state.xml
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc      1016 Jun  5 04:32 memory_monitor_summary.json
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc   1598969 Jun  5 04:32 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc    373412 Jun  5 04:32 log.45006595._053140.job.log.tgz.1
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc        95 Jun  5 04:33 pilot_heartbeat.json
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc      7679 Jun  5 04:34 heartbeat.json
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc      4488 Jun  5 04:34 pilotlog.txt
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc   1164185 Jun  5 04:34 log.45006595._053140.job.log.1
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc       357 Jun  5 04:34 output.list
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc       620 Jun  5 04:34 runtime_log
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc   1556480 Jun  5 04:34 result.tar.gz
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc      8659 Jun  5 04:34 runtime_log.err
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc       656 Jun  5 04:34 jfBLDmagvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbkaKDma7e8Sn.diag
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc      8192 Jun  5 04:45 boinc_mmap_file
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc        28 Jun  5 04:45 wrapper_checkpoint.txt
[2025-06-05 04:45:50] -rw-r--r--. 1 boinc boinc     20532 Jun  5 04:45 stderr.txt
[2025-06-05 04:45:50] HITS file was successfully produced:
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc 179717919 Jun  5 04:31 shared/HITS.pool.root.1
[2025-06-05 04:45:50]  *** Contents of shared directory: ***
[2025-06-05 04:45:50] total 388976
[2025-06-05 04:45:50] -rw-r--r--. 2 boinc boinc 216505080 Jun  5 00:49 ATLAS.root_0
[2025-06-05 04:45:50] -rw-r--r--. 2 boinc boinc    508876 Jun  5 00:49 input.tar.gz
[2025-06-05 04:45:50] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:49 start_atlas.sh
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc 179717919 Jun  5 04:31 HITS.pool.root.1
[2025-06-05 04:45:50] -rw-------. 1 boinc boinc   1556480 Jun  5 04:34 result.tar.gz
04:45:52 (5623): run_atlas exited; CPU time 51010.419251
04:45:52 (5623): called boinc_finish(0)

</stderr_txt>
]]>

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