Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:08:03 (22860): wrapper (7.7.26015): starting
09:08:03 (22860): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:08:03] Arguments: --nthreads 8
[2025-06-04 09:08:03] Threads: 8
[2025-06-04 09:08:03] Checking for CVMFS
[2025-06-04 09:08:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:08:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:08:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:08:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:08:03] 2.11.2.0 2924 15696 102800 146780 1 58 17008286 20275201 1 130560 0 7128171 99.958 3073824 4772 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:08:03] CVMFS is ok
[2025-06-04 09:08:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:08:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:08:03] Further information can be found at the LHC@home message board.
[2025-06-04 09:08:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:08:03] Checking for apptainer binary...
[2025-06-04 09:08:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:08:03] Running /usr/bin/apptainer --version
[2025-06-04 09:08:03] apptainer version 1.3.2-1.el7
[2025-06-04 09:08:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:08:05] c-204-30.aglt2.org
[2025-06-04 09:08:05] apptainer works
[2025-06-04 09:08:05] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:08:05] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:08:05] Starting ATLAS job with PandaID=6679342887
[2025-06-04 09:08:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:05:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:05:41] 2025-06-04 15:05:21,043 | INFO     | extracted standard info from prmon json
[2025-06-04 11:05:41] 2025-06-04 15:05:21,043 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:05:41] 2025-06-04 15:05:21,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:05:41] 2025-06-04 15:05:21,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:05:41] 2025-06-04 15:05:21,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:05:41] 2025-06-04 15:05:21,047 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:05:41] 2025-06-04 15:05:21,048 | INFO     | sum of square deviations: 471562330.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,048 | INFO     | sum of deviations: 10644230563.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,048 | INFO     | mean x: 1749046012.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,048 | INFO     | mean y: 2432131.6260869564
[2025-06-04 11:05:41] 2025-06-04 15:05:21,049 | INFO     | -- intersect: -39477500493.661575
[2025-06-04 11:05:41] 2025-06-04 15:05:21,049 | INFO     | intersect: -39477500493.661575
[2025-06-04 11:05:41] 2025-06-04 15:05:21,049 | INFO     | chi2: 2.161843042260883
[2025-06-04 11:05:41] 2025-06-04 15:05:21,049 | INFO     | sum of square deviations: 412686807.5
[2025-06-04 11:05:41] 2025-06-04 15:05:21,050 | INFO     | sum of deviations: 17416018988.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,050 | INFO     | mean x: 1749045859.5
[2025-06-04 11:05:41] 2025-06-04 15:05:21,050 | INFO     | mean y: 2448983.309090909
[2025-06-04 11:05:41] 2025-06-04 15:05:21,050 | INFO     | -- intersect: -73809980554.88199
[2025-06-04 11:05:41] 2025-06-04 15:05:21,050 | INFO     | intersect: -73809980554.88199
[2025-06-04 11:05:41] 2025-06-04 15:05:21,051 | INFO     | chi2: 1.3873623197449085
[2025-06-04 11:05:41] 2025-06-04 15:05:21,051 | INFO     | current chi2=1.3873623197449085 (change=35.82502093704327 %)
[2025-06-04 11:05:41] 2025-06-04 15:05:21,051 | INFO     | sum of square deviations: 358927660.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,051 | INFO     | sum of deviations: 16558202096.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,052 | INFO     | mean x: 1749045707.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,052 | INFO     | mean y: 2446548.2476190478
[2025-06-04 11:05:41] 2025-06-04 15:05:21,052 | INFO     | -- intersect: -80685267214.59586
[2025-06-04 11:05:41] 2025-06-04 15:05:21,052 | INFO     | intersect: -80685267214.59586
[2025-06-04 11:05:41] 2025-06-04 15:05:21,052 | INFO     | chi2: 1.3888111736150872
[2025-06-04 11:05:41] 2025-06-04 15:05:21,052 | INFO     | current chi2=1.3888111736150872 (change=-0.10443226326379376 %)
[2025-06-04 11:05:41] 2025-06-04 15:05:21,052 | INFO     | right removable region: 104
[2025-06-04 11:05:41] 2025-06-04 15:05:21,053 | INFO     | sum of square deviations: 412686807.5
[2025-06-04 11:05:41] 2025-06-04 15:05:21,053 | INFO     | sum of deviations: -5111716704.5
[2025-06-04 11:05:41] 2025-06-04 15:05:21,053 | INFO     | mean x: 1749046164.5
[2025-06-04 11:05:41] 2025-06-04 15:05:21,053 | INFO     | mean y: 2472039.118181818
[2025-06-04 11:05:41] 2025-06-04 15:05:21,054 | INFO     | -- intersect: 21666911835.915672
[2025-06-04 11:05:41] 2025-06-04 15:05:21,054 | INFO     | intersect: 21666911835.915672
[2025-06-04 11:05:41] 2025-06-04 15:05:21,054 | INFO     | chi2: 0.8174688411377383
[2025-06-04 11:05:41] 2025-06-04 15:05:21,054 | INFO     | current chi2=0.8174688411377383 (change=62.186485088999845 %)
[2025-06-04 11:05:41] 2025-06-04 15:05:21,054 | INFO     | sum of square deviations: 358927660.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,055 | INFO     | sum of deviations: -5138179206.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,055 | INFO     | mean x: 1749046317.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,055 | INFO     | mean y: 2472069.2285714285
[2025-06-04 11:05:41] 2025-06-04 15:05:21,055 | INFO     | -- intersect: 25040702380.986336
[2025-06-04 11:05:41] 2025-06-04 15:05:21,055 | INFO     | intersect: 25040702380.986336
[2025-06-04 11:05:41] 2025-06-04 15:05:21,056 | INFO     | chi2: 0.8090817993605104
[2025-06-04 11:05:41] 2025-06-04 15:05:21,056 | INFO     | current chi2=0.8090817993605104 (change=1.0259769369992133 %)
[2025-06-04 11:05:41] 2025-06-04 15:05:21,056 | INFO     | left removable region: 20
[2025-06-04 11:05:41] 2025-06-04 15:05:21,056 | INFO     | sum of square deviations: 183761585.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,056 | INFO     | sum of deviations: 525293082.0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,057 | INFO     | mean x: 1749046286.5
[2025-06-04 11:05:41] 2025-06-04 15:05:21,057 | INFO     | mean y: 2496375.4285714286
[2025-06-04 11:05:41] 2025-06-04 15:05:21,057 | INFO     | -- intersect: -4997253242.513829
[2025-06-04 11:05:41] 2025-06-04 15:05:21,057 | INFO     | intersect: -4997253242.513829
[2025-06-04 11:05:41] 2025-06-04 15:05:21,057 | INFO     | chi2: 0.00014340052904173665
[2025-06-04 11:05:41] 2025-06-04 15:05:21,057 | INFO     | -- intersect: -4997253242.513829
[2025-06-04 11:05:41] 2025-06-04 15:05:21,057 | INFO     | current memory leak: 2.86 B/s (using 84 data points, chi2=0.00)
[2025-06-04 11:05:41] 2025-06-04 15:05:21,058 | INFO     | ..............................
[2025-06-04 11:05:41] 2025-06-04 15:05:21,058 | INFO     | . Timing measurements:
[2025-06-04 11:05:41] 2025-06-04 15:05:21,058 | INFO     | . get job = 0 s
[2025-06-04 11:05:41] 2025-06-04 15:05:21,058 | INFO     | . initial setup = 3 s
[2025-06-04 11:05:41] 2025-06-04 15:05:21,058 | INFO     | . payload setup = 11 s
[2025-06-04 11:05:41] 2025-06-04 15:05:21,058 | INFO     | . stage-in = 0 s
[2025-06-04 11:05:41] 2025-06-04 15:05:21,059 | INFO     | . payload execution = 6979 s
[2025-06-04 11:05:41] 2025-06-04 15:05:21,059 | INFO     | . stage-out = 0 s
[2025-06-04 11:05:41] 2025-06-04 15:05:21,059 | INFO     | . log creation = 0 s
[2025-06-04 11:05:41] 2025-06-04 15:05:21,059 | INFO     | ..............................
[2025-06-04 11:05:41] 2025-06-04 15:05:21,153 | INFO     | 
[2025-06-04 11:05:41] 2025-06-04 15:05:21,153 | INFO     | job summary report
[2025-06-04 11:05:41] 2025-06-04 15:05:21,153 | INFO     | --------------------------------------------------
[2025-06-04 11:05:41] 2025-06-04 15:05:21,154 | INFO     | PanDA job id: 6679342887
[2025-06-04 11:05:41] 2025-06-04 15:05:21,154 | INFO     | task id: 45006595
[2025-06-04 11:05:41] 2025-06-04 15:05:21,154 | INFO     | errors: (none)
[2025-06-04 11:05:41] 2025-06-04 15:05:21,154 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:05:41] 2025-06-04 15:05:21,154 | INFO     | pilot state: finished 
[2025-06-04 11:05:41] 2025-06-04 15:05:21,154 | INFO     | transexitcode: 0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,155 | INFO     | exeerrorcode: 0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,155 | INFO     | exeerrordiag: 
[2025-06-04 11:05:41] 2025-06-04 15:05:21,155 | INFO     | exitcode: 0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,155 | INFO     | exitmsg: OK
[2025-06-04 11:05:41] 2025-06-04 15:05:21,155 | INFO     | cpuconsumptiontime: 50945 s
[2025-06-04 11:05:41] 2025-06-04 15:05:21,155 | INFO     | nevents: 400
[2025-06-04 11:05:41] 2025-06-04 15:05:21,156 | INFO     | neventsw: 0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,156 | INFO     | pid: 484
[2025-06-04 11:05:41] 2025-06-04 15:05:21,156 | INFO     | pgrp: 484
[2025-06-04 11:05:41] 2025-06-04 15:05:21,156 | INFO     | corecount: 8
[2025-06-04 11:05:41] 2025-06-04 15:05:21,156 | INFO     | event service: False
[2025-06-04 11:05:41] 2025-06-04 15:05:21,156 | INFO     | sizes: {0: 2397063, 1: 2397318, 7: 2397524, 12: 2397552, 6994: 2424586, 6995: 2433711, 7003: 2433825}
[2025-06-04 11:05:41] 2025-06-04 15:05:21,157 | INFO     | --------------------------------------------------
[2025-06-04 11:05:41] 2025-06-04 15:05:21,157 | INFO     | 
[2025-06-04 11:05:41] 2025-06-04 15:05:21,157 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:05:41] 2025-06-04 15:05:21,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,185 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:05:41] 2025-06-04 15:05:21,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:05:41] 2025-06-04 15:05:21,189 | INFO     | job 6679342887 has completed (purged errors)
[2025-06-04 11:05:41] 2025-06-04 15:05:21,189 | INFO     | overall cleanup function is called
[2025-06-04 11:05:41] 2025-06-04 15:05:22,195 | INFO     | --- collectZombieJob: --- 10, [484]
[2025-06-04 11:05:41] 2025-06-04 15:05:22,196 | INFO     | zombie collector waiting for pid 484
[2025-06-04 11:05:41] 2025-06-04 15:05:22,203 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:05:41] 2025-06-04 15:05:22,203 | INFO     | collected zombie processes
[2025-06-04 11:05:41] 2025-06-04 15:05:22,204 | INFO     | will attempt to kill all subprocesses of pid=484
[2025-06-04 11:05:41] 2025-06-04 15:05:22,292 | INFO     | process IDs to be killed: [484] (in reverse order)
[2025-06-04 11:05:41] 2025-06-04 15:05:22,357 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:05:41] 2025-06-04 15:05:22,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:05:41] 2025-06-04 15:05:22,362 | INFO     | did not find any defunct processes belonging to 484
[2025-06-04 11:05:41] 2025-06-04 15:05:22,366 | INFO     | did not find any defunct processes belonging to 484
[2025-06-04 11:05:41] 2025-06-04 15:05:22,366 | INFO     | ready for new job
[2025-06-04 11:05:41] 2025-06-04 15:05:22,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:05:41] 2025-06-04 15:05:22,368 | INFO     | **************************************
[2025-06-04 11:05:41] 2025-06-04 15:05:22,368 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:05:41] 2025-06-04 15:05:22,369 | INFO     | **************************************
[2025-06-04 11:05:41] 2025-06-04 15:05:22,369 | INFO     | 
[2025-06-04 11:05:41] 2025-06-04 15:05:22,369 | INFO     | architecture information:
[2025-06-04 11:05:41] 2025-06-04 15:05:22,370 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:05:41] 2025-06-04 15:05:22,389 | INFO     | cat /etc/os-release:
[2025-06-04 11:05:41] NAME="CentOS Linux"
[2025-06-04 11:05:41] VERSION="7 (Core)"
[2025-06-04 11:05:41] ID="centos"
[2025-06-04 11:05:41] ID_LIKE="rhel fedora"
[2025-06-04 11:05:41] VERSION_ID="7"
[2025-06-04 11:05:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:05:41] ANSI_COLOR="0;31"
[2025-06-04 11:05:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:05:41] HOME_URL="https://www.centos.org/"
[2025-06-04 11:05:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:05:41] 
[2025-06-04 11:05:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:05:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:05:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:05:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:05:41] 
[2025-06-04 11:05:41] 2025-06-04 15:05:22,390 | INFO     | **************************************
[2025-06-04 11:05:41] 2025-06-04 15:05:22,893 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:05:41] 2025-06-04 15:05:22,914 | INFO     | sufficient remaining disk space (18609078272 B)
[2025-06-04 11:05:41] 2025-06-04 15:05:22,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:05:41] 2025-06-04 15:05:22,915 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:05:41] 2025-06-04 15:05:22,915 | INFO     | update_server=False
[2025-06-04 11:05:41] 2025-06-04 15:05:22,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:05:41] 2025-06-04 15:05:22,915 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:05:41] 2025-06-04 15:05:22,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:05:41] 2025-06-04 15:05:22,916 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:05:41] 2025-06-04 15:05:22,917 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:05:41] 2025-06-04 15:05:22,917 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:05:41] 2025-06-04 15:05:23,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:05:41] 2025-06-04 15:05:23,058 | INFO     | aborting loop
[2025-06-04 11:05:41] 2025-06-04 15:05:23,438 | INFO     | all job control threads have been joined
[2025-06-04 11:05:41] 2025-06-04 15:05:23,709 | INFO     | all data control threads have been joined
[2025-06-04 11:05:41] 2025-06-04 15:05:23,812 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:05:41] 2025-06-04 15:05:23,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:05:41] 2025-06-04 15:05:23,920 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:23,921 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:24,064 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:24,312 | INFO     | all payload control threads have been joined
[2025-06-04 11:05:41] 2025-06-04 15:05:24,444 | INFO     | [job] control thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:24,475 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:24,517 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:24,673 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:24,681 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:24,687 | INFO     | [job] validate thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:24,714 | INFO     | [data] control thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:25,000 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:25,315 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:25,317 | INFO     | [payload] control thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:25,817 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:27,908 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:33,163 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:05:41] 2025-06-04 15:05:34,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:05:41] 2025-06-04 15:05:35,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140011964974912)>', '<ExcThread(monitor, started 140011219441408)>']
[2025-06-04 11:05:41] 2025-06-04 15:05:35,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:05:41] 2025-06-04 15:05:35,982 | INFO     | [monitor] control thread has ended
[2025-06-04 11:05:41] 2025-06-04 15:05:40,973 | INFO     | all workflow threads have been joined
[2025-06-04 11:05:41] 2025-06-04 15:05:40,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:05:41] 2025-06-04 15:05:40,974 | INFO     | traces error code: 0
[2025-06-04 11:05:41] 2025-06-04 15:05:40,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:05:41] 2025-06-04 15:05:41,091 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:05:41] 2025-06-04 15:05:41,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:05:41] 2025-06-04 15:05:41,100 [wrapper] pilotpid: 26456
[2025-06-04 11:05:41] 2025-06-04 15:05:41,104 [wrapper] Pilot exit status: 0
[2025-06-04 11:05:41] 2025-06-04 15:05:41,122 [wrapper] pandaids: 6679342887
[2025-06-04 11:05:41] 2025-06-04 15:05:41,164 [wrapper] cleanup supervisor_pilot 13553 26457
[2025-06-04 11:05:41] 2025-06-04 15:05:41,169 [wrapper] Test setup, not cleaning
[2025-06-04 11:05:41] 2025-06-04 15:05:41,173 [wrapper] apfmon messages muted
[2025-06-04 11:05:41] 2025-06-04 15:05:41,178 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:05:41] 2025-06-04 15:05:41,183 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:05:41]  *** Error codes and diagnostics ***
[2025-06-04 11:05:41]     "exeErrorCode": 0,
[2025-06-04 11:05:41]     "exeErrorDiag": "",
[2025-06-04 11:05:41]     "pilotErrorCode": 0,
[2025-06-04 11:05:41]     "pilotErrorDiag": "",
[2025-06-04 11:05:41]  *** Listing of results directory ***
[2025-06-04 11:05:41] total 392808
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:58 queuedata.json
[2025-06-04 11:05:41] -rwx------ 1 boincer umatlas     37140 Jun  4 04:58 runpilot2-wrapper.sh
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:05:41] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:08 run_atlas
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:08 job.xml
[2025-06-04 11:05:41] -rw-r--r-- 2 boincer umatlas 213137034 Jun  4 09:08 EVNT.45006593._000910.pool.root.1
[2025-06-04 11:05:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:08 start_atlas.sh
[2025-06-04 11:05:41] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:08 shared
[2025-06-04 11:05:41] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 09:08 input.tar.gz
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:08 boinc_lockfile
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 09:08 pandaJob.out
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas    986811 Jun  4 09:08 agis_schedconf.cvmfs.json
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas   1598969 Jun  4 09:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:05:41] drwx------ 4 boincer umatlas      4096 Jun  4 09:08 pilot3
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas      5905 Jun  4 11:01 init_data.xml
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas 183341485 Jun  4 11:04 HITS.45006595._056185.pool.root.1
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas        95 Jun  4 11:04 pilot_heartbeat.json
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas       530 Jun  4 11:05 boinc_task_state.xml
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas      1049 Jun  4 11:05 memory_monitor_summary.json
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas    325541 Jun  4 11:05 log.45006595._056185.job.log.tgz.1
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas      7739 Jun  4 11:05 heartbeat.json
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:05 boinc_mmap_file
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:05 wrapper_checkpoint.txt
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas      4548 Jun  4 11:05 pilotlog.txt
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas    642315 Jun  4 11:05 log.45006595._056185.job.log.1
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas       357 Jun  4 11:05 output.list
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:05 runtime_log
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas    983040 Jun  4 11:05 result.tar.gz
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 11:05 runtime_log.err
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas       659 Jun  4 11:05 JrKNDm17yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmotnKDm5GlTDo.diag
[2025-06-04 11:05:41] -rw-r--r-- 1 boincer umatlas     20715 Jun  4 11:05 stderr.txt
[2025-06-04 11:05:41] HITS file was successfully produced:
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas 183341485 Jun  4 11:04 shared/HITS.pool.root.1
[2025-06-04 11:05:41]  *** Contents of shared directory: ***
[2025-06-04 11:05:41] total 388668
[2025-06-04 11:05:41] -rw-r--r-- 2 boincer umatlas 213137034 Jun  4 09:08 ATLAS.root_0
[2025-06-04 11:05:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:08 start_atlas.sh
[2025-06-04 11:05:41] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 09:08 input.tar.gz
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas 183341485 Jun  4 11:04 HITS.pool.root.1
[2025-06-04 11:05:41] -rw------- 1 boincer umatlas    983040 Jun  4 11:05 result.tar.gz
11:05:42 (22860): run_atlas exited; CPU time 50897.923591
11:05:42 (22860): called boinc_finish(0)

</stderr_txt>
]]>

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