Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:34:59 (305203): wrapper (7.7.26015): starting
11:34:59 (305203): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:34:59] Arguments: --nthreads 8
[2025-06-04 11:34:59] Threads: 8
[2025-06-04 11:34:59] Checking for CVMFS
[2025-06-04 11:34:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:34:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:34:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:34:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:34:59] 2.12.6.0 5726 1524 199268 146786 2 156 25291068 32503809 25969 16776704 0 13703888 99.680 10567442 29459 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:34:59] CVMFS is ok
[2025-06-04 11:34:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:34:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:34:59] Further information can be found at the LHC@home message board.
[2025-06-04 11:34:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:34:59] Checking for apptainer binary...
[2025-06-04 11:34:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:34:59] Running /usr/bin/apptainer --version
[2025-06-04 11:34:59] apptainer version 1.4.1-1.el9
[2025-06-04 11:34:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:35:00] c7-3-16.aglt2.org
[2025-06-04 11:35:00] apptainer works
[2025-06-04 11:35:00] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:35:00] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:35:00] Starting ATLAS job with PandaID=6679297240
[2025-06-04 11:35:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:07:16]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:07:16]  is_altstaged=None
[2025-06-04 13:07:16]  is_tar=False
[2025-06-04 13:07:16]  lfn=log.44871837._102165.job.log.tgz.1
[2025-06-04 13:07:16]  mtime=0
[2025-06-04 13:07:16]  protocol_id=None
[2025-06-04 13:07:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:07:16]  replicas=None
[2025-06-04 13:07:16]  scope=mc23_13p6TeV
[2025-06-04 13:07:16]  status=None
[2025-06-04 13:07:16]  status_code=0
[2025-06-04 13:07:16]  storage_token=
[2025-06-04 13:07:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679297240/log.44871837._102165.job.log.tgz.1
[2025-06-04 13:07:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/f5/log.44871837._102165.job.log.tgz.1
[2025-06-04 13:07:16]  workdir=None
[2025-06-04 13:07:16] ]
[2025-06-04 13:07:16] 2025-06-04 17:06:53,139 | INFO     | transferring file log.44871837._102165.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679297240/log.44871837._102165.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:07:16] 2025-06-04 17:06:53,140 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679297240/log.44871837._102165.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._102165.job
[2025-06-04 13:07:16] 2025-06-04 17:06:53,160 | INFO     | adding to output.list: log.44871837._102165.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/f5/log.44871837._102165.job.log.tg
[2025-06-04 13:07:16] 2025-06-04 17:06:53,161 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:07:16] 2025-06-04 17:06:53,161 | INFO     | summary of transferred files:
[2025-06-04 13:07:16] 2025-06-04 17:06:53,161 | INFO     |  -- lfn=log.44871837._102165.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:07:16] 2025-06-04 17:06:53,162 | INFO     | stage-out finished correctly
[2025-06-04 13:07:16] 2025-06-04 17:06:54,878 | INFO     | monitor loop #399: job 0:6679297240 is in state 'finished'
[2025-06-04 13:07:16] 2025-06-04 17:06:54,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:07:16] 2025-06-04 17:06:55,618 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:07:16] 2025-06-04 17:06:56,962 | INFO     | job 6679297240 has state=finished
[2025-06-04 13:07:16] 2025-06-04 17:06:56,962 | INFO     | preparing for final server update for job 6679297240 in state='finished'
[2025-06-04 13:07:16] 2025-06-04 17:06:57,089 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 13:07:16] 2025-06-04 17:06:57,089 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:07:16] 2025-06-04 17:06:57,090 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:07:16] 2025-06-04 17:06:57,090 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:07:16] 2025-06-04 17:06:57,090 | INFO     | job 6679297240 has finished - writing final server update
[2025-06-04 13:07:16] 2025-06-04 17:06:57,090 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:07:16] 2025-06-04 17:06:57,109 | INFO     | executing command: lscpu
[2025-06-04 13:07:16] 2025-06-04 17:06:57,199 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:07:16] 2025-06-04 17:06:57,382 | INFO     | monitor loop #400: job 0:6679297240 is in state 'finished'
[2025-06-04 13:07:16] 2025-06-04 17:06:57,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:07:16] 2025-06-04 17:06:59,887 | INFO     | monitor loop #401: job 0:6679297240 is in state 'finished'
[2025-06-04 13:07:16] 2025-06-04 17:06:59,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:07:16] 2025-06-04 17:07:01,178 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:07:16] 2025-06-04 17:07:01,180 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679297240/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:07:16] 2025-06-04 17:07:01,180 | INFO     | extracted standard info from prmon json
[2025-06-04 13:07:16] 2025-06-04 17:07:01,181 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:07:16] 2025-06-04 17:07:01,181 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:07:16] 2025-06-04 17:07:01,181 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:07:16] 2025-06-04 17:07:01,181 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:07:16] 2025-06-04 17:07:01,183 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:07:16] 2025-06-04 17:07:01,183 | INFO     | sum of square deviations: 177275882.0
[2025-06-04 13:07:16] 2025-06-04 17:07:01,184 | INFO     | sum of deviations: -18022157749.0
[2025-06-04 13:07:16] 2025-06-04 17:07:01,184 | INFO     | mean x: 1749054145.0
[2025-06-04 13:07:16] 2025-06-04 17:07:01,184 | INFO     | mean y: 2363960.8313253014
[2025-06-04 13:07:16] 2025-06-04 17:07:01,184 | INFO     | -- intersect: 177814085200.68008
[2025-06-04 13:07:16] 2025-06-04 17:07:01,184 | INFO     | intersect: 177814085200.68008
[2025-06-04 13:07:16] 2025-06-04 17:07:01,184 | INFO     | chi2: 0.17989376765974371
[2025-06-04 13:07:16] 2025-06-04 17:07:01,184 | INFO     | -- intersect: 177814085200.68008
[2025-06-04 13:07:16] 2025-06-04 17:07:01,184 | INFO     | current memory leak: -101.66 B/s (using 83 data points, chi2=0.18)
[2025-06-04 13:07:16] 2025-06-04 17:07:01,185 | INFO     | ..............................
[2025-06-04 13:07:16] 2025-06-04 17:07:01,185 | INFO     | . Timing measurements:
[2025-06-04 13:07:16] 2025-06-04 17:07:01,185 | INFO     | . get job = 0 s
[2025-06-04 13:07:16] 2025-06-04 17:07:01,185 | INFO     | . initial setup = 2 s
[2025-06-04 13:07:16] 2025-06-04 17:07:01,185 | INFO     | . payload setup = 6 s
[2025-06-04 13:07:16] 2025-06-04 17:07:01,185 | INFO     | . stage-in = 0 s
[2025-06-04 13:07:16] 2025-06-04 17:07:01,185 | INFO     | . payload execution = 5474 s
[2025-06-04 13:07:16] 2025-06-04 17:07:01,185 | INFO     | . stage-out = 0 s
[2025-06-04 13:07:16] 2025-06-04 17:07:01,185 | INFO     | . log creation = 0 s
[2025-06-04 13:07:16] 2025-06-04 17:07:01,185 | INFO     | ..............................
[2025-06-04 13:07:16] 2025-06-04 17:07:01,282 | INFO     | 
[2025-06-04 13:07:16] 2025-06-04 17:07:01,282 | INFO     | job summary report
[2025-06-04 13:07:16] 2025-06-04 17:07:01,282 | INFO     | --------------------------------------------------
[2025-06-04 13:07:16] 2025-06-04 17:07:01,282 | INFO     | PanDA job id: 6679297240
[2025-06-04 13:07:16] 2025-06-04 17:07:01,282 | INFO     | task id: 44871837
[2025-06-04 13:07:16] 2025-06-04 17:07:01,282 | INFO     | errors: (none)
[2025-06-04 13:07:16] 2025-06-04 17:07:01,282 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | pilot state: finished 
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | transexitcode: 0
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | exeerrorcode: 0
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | exeerrordiag: 
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | exitcode: 0
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | exitmsg: OK
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | cpuconsumptiontime: 40044 s
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | nevents: 400
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | neventsw: 0
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | pid: 319771
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | pgrp: 319771
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | corecount: 8
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | event service: False
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | sizes: {0: 2397342, 1: 2397342, 5: 2397576, 11: 2397632, 5484: 2424131, 5486: 2433072, 5489: 2433256, 5494: 2433426}
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | --------------------------------------------------
[2025-06-04 13:07:16] 2025-06-04 17:07:01,283 | INFO     | 
[2025-06-04 13:07:16] 2025-06-04 17:07:01,284 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 13:07:16] 2025-06-04 17:07:01,307 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,307 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,307 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,308 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:07:16] 2025-06-04 17:07:01,309 | INFO     | job 6679297240 has completed (purged errors)
[2025-06-04 13:07:16] 2025-06-04 17:07:01,309 | INFO     | overall cleanup function is called
[2025-06-04 13:07:16] 2025-06-04 17:07:02,317 | INFO     | --- collectZombieJob: --- 10, [319771]
[2025-06-04 13:07:16] 2025-06-04 17:07:02,317 | INFO     | zombie collector waiting for pid 319771
[2025-06-04 13:07:16] 2025-06-04 17:07:02,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:07:16] 2025-06-04 17:07:02,317 | INFO     | collected zombie processes
[2025-06-04 13:07:16] 2025-06-04 17:07:02,317 | INFO     | will attempt to kill all subprocesses of pid=319771
[2025-06-04 13:07:16] 2025-06-04 17:07:02,744 | INFO     | process IDs to be killed: [319771] (in reverse order)
[2025-06-04 13:07:16] 2025-06-04 17:07:02,885 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:07:16] 2025-06-04 17:07:02,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:07:16] 2025-06-04 17:07:02,904 | INFO     | did not find any defunct processes belonging to 319771
[2025-06-04 13:07:16] 2025-06-04 17:07:02,924 | INFO     | did not find any defunct processes belonging to 319771
[2025-06-04 13:07:16] 2025-06-04 17:07:02,924 | INFO     | ready for new job
[2025-06-04 13:07:16] 2025-06-04 17:07:02,925 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:07:16] 2025-06-04 17:07:02,927 | INFO     | **************************************
[2025-06-04 13:07:16] 2025-06-04 17:07:02,927 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:07:16] 2025-06-04 17:07:02,927 | INFO     | **************************************
[2025-06-04 13:07:16] 2025-06-04 17:07:02,927 | INFO     | 
[2025-06-04 13:07:16] 2025-06-04 17:07:02,946 | INFO     | architecture information:
[2025-06-04 13:07:16] 2025-06-04 17:07:02,946 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:07:16] 2025-06-04 17:07:02,964 | INFO     | cat /etc/os-release:
[2025-06-04 13:07:16] NAME="CentOS Linux"
[2025-06-04 13:07:16] VERSION="7 (Core)"
[2025-06-04 13:07:16] ID="centos"
[2025-06-04 13:07:16] ID_LIKE="rhel fedora"
[2025-06-04 13:07:16] VERSION_ID="7"
[2025-06-04 13:07:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:07:16] ANSI_COLOR="0;31"
[2025-06-04 13:07:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:07:16] HOME_URL="https://www.centos.org/"
[2025-06-04 13:07:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:07:16] 
[2025-06-04 13:07:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:07:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:07:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:07:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:07:16] 
[2025-06-04 13:07:16] 2025-06-04 17:07:02,964 | INFO     | **************************************
[2025-06-04 13:07:16] 2025-06-04 17:07:03,467 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 13:07:16] 2025-06-04 17:07:03,486 | INFO     | sufficient remaining disk space (95171903488 B)
[2025-06-04 13:07:16] 2025-06-04 17:07:03,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:07:16] 2025-06-04 17:07:03,487 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:07:16] 2025-06-04 17:07:03,487 | INFO     | update_server=False
[2025-06-04 13:07:16] 2025-06-04 17:07:03,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:07:16] 2025-06-04 17:07:03,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:07:16] 2025-06-04 17:07:03,487 | INFO     | aborting loop
[2025-06-04 13:07:16] 2025-06-04 17:07:03,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:07:16] 2025-06-04 17:07:04,277 | INFO     | all data control threads have been joined
[2025-06-04 13:07:16] 2025-06-04 17:07:04,414 | INFO     | all payload control threads have been joined
[2025-06-04 13:07:16] 2025-06-04 17:07:04,492 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:04,493 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:04,497 | INFO     | PID=308919 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 13:07:16] 2025-06-04 17:07:04,498 | INFO     | .. there are 35 such processes running
[2025-06-04 13:07:16] 2025-06-04 17:07:04,498 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:07:16] 2025-06-04 17:07:04,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:07:16] 2025-06-04 17:07:04,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:07:16] 2025-06-04 17:07:04,754 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:04,843 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:04,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:05,034 | INFO     | all job control threads have been joined
[2025-06-04 13:07:16] 2025-06-04 17:07:05,124 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:05,227 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:05,232 | INFO     | [job] validate thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:05,281 | INFO     | [data] control thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:05,420 | INFO     | [payload] control thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:05,496 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:05,767 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:05,948 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:06,040 | INFO     | [job] control thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:06,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:07:16] 2025-06-04 17:07:06,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:07:16] 2025-06-04 17:07:07,299 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:10,234 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:07:16] 2025-06-04 17:07:11,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225760913216)>', '<ExcThread(monitor, started 140225405757184)>']
[2025-06-04 13:07:16] 2025-06-04 17:07:11,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:07:16] 2025-06-04 17:07:11,535 | INFO     | [monitor] control thread has ended
[2025-06-04 13:07:16] 2025-06-04 17:07:16,396 | INFO     | all workflow threads have been joined
[2025-06-04 13:07:16] 2025-06-04 17:07:16,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:07:16] 2025-06-04 17:07:16,397 | INFO     | traces error code: 0
[2025-06-04 13:07:16] 2025-06-04 17:07:16,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:07:16] 2025-06-04 17:07:16,613 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:07:16] 2025-06-04 17:07:16,616 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:07:16] 2025-06-04 17:07:16,618 [wrapper] pilotpid: 308919
[2025-06-04 13:07:16] 2025-06-04 17:07:16,622 [wrapper] Pilot exit status: 0
[2025-06-04 13:07:16] 2025-06-04 17:07:16,633 [wrapper] pandaids: 6679297240
[2025-06-04 13:07:16] 2025-06-04 17:07:16,728 [wrapper] cleanup supervisor_pilot  697925 308920
[2025-06-04 13:07:16] 2025-06-04 17:07:16,731 [wrapper] Test setup, not cleaning
[2025-06-04 13:07:16] 2025-06-04 17:07:16,734 [wrapper] apfmon messages muted
[2025-06-04 13:07:16] 2025-06-04 17:07:16,737 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:07:16] 2025-06-04 17:07:16,740 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:07:16]  *** Error codes and diagnostics ***
[2025-06-04 13:07:16]     "exeErrorCode": 0,
[2025-06-04 13:07:16]     "exeErrorDiag": "",
[2025-06-04 13:07:16]     "pilotErrorCode": 0,
[2025-06-04 13:07:16]     "pilotErrorDiag": "",
[2025-06-04 13:07:16]  *** Listing of results directory ***
[2025-06-04 13:07:16] total 413516
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:56 queuedata.json
[2025-06-04 13:07:16] -rwx------. 1 boincer umatlas     37140 Jun  4 04:57 runpilot2-wrapper.sh
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:07:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:34 run_atlas
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:34 job.xml
[2025-06-04 13:07:16] -rw-r--r--. 2 boincer umatlas 222253897 Jun  4 11:34 EVNT.44871834._002561.pool.root.1
[2025-06-04 13:07:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:34 start_atlas.sh
[2025-06-04 13:07:16] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:34 shared
[2025-06-04 13:07:16] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 11:34 input.tar.gz
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:34 boinc_lockfile
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 11:35 pandaJob.out
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas    990989 Jun  4 11:35 agis_schedconf.cvmfs.json
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas   1598969 Jun  4 11:35 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:07:16] drwx------. 4 boincer umatlas      4096 Jun  4 11:35 pilot3
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas      6934 Jun  4 13:03 init_data.xml
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas 195668286 Jun  4 13:06 HITS.44871837._102165.pool.root.1
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas       529 Jun  4 13:06 boinc_task_state.xml
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas      1032 Jun  4 13:06 memory_monitor_summary.json
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas        95 Jun  4 13:06 pilot_heartbeat.json
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas    314097 Jun  4 13:06 log.44871837._102165.job.log.tgz.1
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas      7688 Jun  4 13:07 heartbeat.json
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas        27 Jun  4 13:07 wrapper_checkpoint.txt
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas      4748 Jun  4 13:07 pilotlog.txt
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 13:07 boinc_mmap_file
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas    526151 Jun  4 13:07 log.44871837._102165.job.log.1
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas       357 Jun  4 13:07 output.list
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas       620 Jun  4 13:07 runtime_log
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas    860160 Jun  4 13:07 result.tar.gz
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 13:07 runtime_log.err
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas       653 Jun  4 13:07 nd9LDmU7yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKsnKDm586NYo.diag
[2025-06-04 13:07:16] -rw-r--r--. 1 boincer umatlas     21488 Jun  4 13:07 stderr.txt
[2025-06-04 13:07:16] HITS file was successfully produced:
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas 195668286 Jun  4 13:06 shared/HITS.pool.root.1
[2025-06-04 13:07:16]  *** Contents of shared directory: ***
[2025-06-04 13:07:16] total 409496
[2025-06-04 13:07:16] -rw-r--r--. 2 boincer umatlas 222253897 Jun  4 11:34 ATLAS.root_0
[2025-06-04 13:07:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:34 start_atlas.sh
[2025-06-04 13:07:16] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 11:34 input.tar.gz
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas 195668286 Jun  4 13:06 HITS.pool.root.1
[2025-06-04 13:07:16] -rw-------. 1 boincer umatlas    860160 Jun  4 13:07 result.tar.gz
13:07:18 (305203): run_atlas exited; CPU time 40218.617328
13:07:18 (305203): called boinc_finish(0)

</stderr_txt>
]]>

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