Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:29:42 (2613877): wrapper (7.7.26015): starting
22:29:42 (2613877): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 22:29:42] Arguments: --nthreads 12
[2025-06-04 22:29:42] Threads: 12
[2025-06-04 22:29:42] Checking for CVMFS
[2025-06-04 22:29:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:29:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:29:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:29:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:29:45] 2.12.7.0 9268 8917 220456 146793 0 216 42676324 46080000 39165 130560 0 57196202 99.938 10627026 19866 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-04 22:29:45] CVMFS is ok
[2025-06-04 22:29:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:29:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:29:45] Further information can be found at the LHC@home message board.
[2025-06-04 22:29:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:29:45] Checking for apptainer binary...
[2025-06-04 22:29:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:29:45] Running /usr/bin/apptainer --version
[2025-06-04 22:29:45] apptainer version 1.4.1-1.el9
[2025-06-04 22:29:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:29:46] mff2104.farm.particle.cz
[2025-06-04 22:29:46] apptainer works
[2025-06-04 22:29:46] Set ATHENA_PROC_NUMBER=12
[2025-06-04 22:29:46] Set ATHENA_CORE_NUMBER=12
[2025-06-04 22:29:46] Starting ATLAS job with PandaID=6679297241
[2025-06-04 22:29:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:32:24]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:32:24] 2025-06-04 22:17:39,665 | INFO     | extracted standard info from prmon json
[2025-06-05 00:32:24] 2025-06-04 22:17:39,665 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:32:24] 2025-06-04 22:17:39,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:32:24] 2025-06-04 22:17:39,666 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:32:24] 2025-06-04 22:17:39,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:32:24] 2025-06-04 22:17:39,672 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:32:24] 2025-06-04 22:17:39,672 | INFO     | sum of square deviations: 319443336.9900984
[2025-06-05 00:32:24] 2025-06-04 22:17:39,673 | INFO     | sum of deviations: 37901224669.23762
[2025-06-05 00:32:24] 2025-06-04 22:17:39,673 | INFO     | mean x: 1749072309.009901
[2025-06-05 00:32:24] 2025-06-04 22:17:39,673 | INFO     | mean y: 2511482.7623762377
[2025-06-05 00:32:24] 2025-06-04 22:17:39,673 | INFO     | -- intersect: -207520935934.08347
[2025-06-05 00:32:24] 2025-06-04 22:17:39,673 | INFO     | intersect: -207520935934.08347
[2025-06-05 00:32:24] 2025-06-04 22:17:39,673 | INFO     | chi2: 5.5088005153802415
[2025-06-05 00:32:24] 2025-06-04 22:17:39,674 | INFO     | sum of square deviations: 274307911.98958343
[2025-06-05 00:32:24] 2025-06-04 22:17:39,674 | INFO     | sum of deviations: 42896644688.124985
[2025-06-05 00:32:24] 2025-06-04 22:17:39,674 | INFO     | mean x: 1749072156.5104167
[2025-06-05 00:32:24] 2025-06-04 22:17:39,674 | INFO     | mean y: 2527375.875
[2025-06-05 00:32:24] 2025-06-04 22:17:39,674 | INFO     | -- intersect: -273519757444.58267
[2025-06-05 00:32:24] 2025-06-04 22:17:39,674 | INFO     | intersect: -273519757444.58267
[2025-06-05 00:32:24] 2025-06-04 22:17:39,675 | INFO     | chi2: 4.753569648141886
[2025-06-05 00:32:24] 2025-06-04 22:17:39,675 | INFO     | current chi2=4.753569648141886 (change=13.709533774726394 %)
[2025-06-05 00:32:24] 2025-06-04 22:17:39,675 | INFO     | right removable region: 95
[2025-06-05 00:32:24] 2025-06-04 22:17:39,675 | INFO     | sum of square deviations: 274307301.98958343
[2025-06-05 00:32:24] 2025-06-04 22:17:39,676 | INFO     | sum of deviations: 5211474531.229169
[2025-06-05 00:32:24] 2025-06-04 22:17:39,676 | INFO     | mean x: 1749072461.5104167
[2025-06-05 00:32:24] 2025-06-04 22:17:39,676 | INFO     | mean y: 2621541.7708333335
[2025-06-05 00:32:24] 2025-06-04 22:17:39,676 | INFO     | -- intersect: -33227432927.51191
[2025-06-05 00:32:24] 2025-06-04 22:17:39,676 | INFO     | intersect: -33227432927.51191
[2025-06-05 00:32:24] 2025-06-04 22:17:39,676 | INFO     | chi2: 1.4326440673041958
[2025-06-05 00:32:24] 2025-06-04 22:17:39,676 | INFO     | current chi2=1.4326440673041958 (change=73.99353882384487 %)
[2025-06-05 00:32:24] 2025-06-04 22:17:39,676 | INFO     | sum of square deviations: 233636466.98901114
[2025-06-05 00:32:24] 2025-06-04 22:17:39,677 | INFO     | sum of deviations: -5522099702.725274
[2025-06-05 00:32:24] 2025-06-04 22:17:39,677 | INFO     | mean x: 1749072614.010989
[2025-06-05 00:32:24] 2025-06-04 22:17:39,677 | INFO     | mean y: 2661212.7252747254
[2025-06-05 00:32:24] 2025-06-04 22:17:39,677 | INFO     | -- intersect: 41342754590.91045
[2025-06-05 00:32:24] 2025-06-04 22:17:39,677 | INFO     | intersect: 41342754590.91045
[2025-06-05 00:32:24] 2025-06-04 22:17:39,677 | INFO     | chi2: 0.9230552758644801
[2025-06-05 00:32:24] 2025-06-04 22:17:39,677 | INFO     | current chi2=0.9230552758644801 (change=35.569811306908086 %)
[2025-06-05 00:32:24] 2025-06-04 22:17:39,678 | INFO     | sum of square deviations: 197203697.5
[2025-06-05 00:32:24] 2025-06-04 22:17:39,678 | INFO     | sum of deviations: -8790590501.0
[2025-06-05 00:32:24] 2025-06-04 22:17:39,678 | INFO     | mean x: 1749072766.5
[2025-06-05 00:32:24] 2025-06-04 22:17:39,678 | INFO     | mean y: 2674581.1627906975
[2025-06-05 00:32:24] 2025-06-04 22:17:39,678 | INFO     | -- intersect: 77969683525.063
[2025-06-05 00:32:24] 2025-06-04 22:17:39,678 | INFO     | intersect: 77969683525.063
[2025-06-05 00:32:24] 2025-06-04 22:17:39,678 | INFO     | chi2: 0.843469828322712
[2025-06-05 00:32:24] 2025-06-04 22:17:39,683 | INFO     | current chi2=0.843469828322712 (change=8.621959011851482 %)
[2025-06-05 00:32:24] 2025-06-04 22:17:39,683 | INFO     | left removable region: 30
[2025-06-05 00:32:24] 2025-06-04 22:17:39,683 | INFO     | sum of square deviations: 85136480.0
[2025-06-05 00:32:24] 2025-06-04 22:17:39,684 | INFO     | sum of deviations: -839823539.0
[2025-06-05 00:32:24] 2025-06-04 22:17:39,684 | INFO     | mean x: 1749073041.0
[2025-06-05 00:32:24] 2025-06-04 22:17:39,684 | INFO     | mean y: 2694058.153846154
[2025-06-05 00:32:24] 2025-06-04 22:17:39,684 | INFO     | -- intersect: 17256316844.321564
[2025-06-05 00:32:24] 2025-06-04 22:17:39,684 | INFO     | intersect: 17256316844.321564
[2025-06-05 00:32:24] 2025-06-04 22:17:39,684 | INFO     | chi2: 0.00355649308285202
[2025-06-05 00:32:24] 2025-06-04 22:17:39,684 | INFO     | -- intersect: 17256316844.321564
[2025-06-05 00:32:24] 2025-06-04 22:17:39,684 | INFO     | current memory leak: -9.86 B/s (using 65 data points, chi2=0.00)
[2025-06-05 00:32:24] 2025-06-04 22:17:39,685 | INFO     | ..............................
[2025-06-05 00:32:24] 2025-06-04 22:17:39,685 | INFO     | . Timing measurements:
[2025-06-05 00:32:24] 2025-06-04 22:17:39,685 | INFO     | . get job = 0 s
[2025-06-05 00:32:24] 2025-06-04 22:17:39,685 | INFO     | . initial setup = 3 s
[2025-06-05 00:32:24] 2025-06-04 22:17:39,685 | INFO     | . payload setup = 61 s
[2025-06-05 00:32:24] 2025-06-04 22:17:39,685 | INFO     | . stage-in = 0 s
[2025-06-05 00:32:24] 2025-06-04 22:17:39,685 | INFO     | . payload execution = 6188 s
[2025-06-05 00:32:24] 2025-06-04 22:17:39,685 | INFO     | . stage-out = 1 s
[2025-06-05 00:32:24] 2025-06-04 22:17:39,686 | INFO     | . log creation = 0 s
[2025-06-05 00:32:24] 2025-06-04 22:17:39,686 | INFO     | ..............................
[2025-06-05 00:32:24] 2025-06-04 22:17:39,832 | INFO     | 
[2025-06-05 00:32:24] 2025-06-04 22:17:39,832 | INFO     | job summary report
[2025-06-05 00:32:24] 2025-06-04 22:17:39,832 | INFO     | --------------------------------------------------
[2025-06-05 00:32:24] 2025-06-04 22:17:39,832 | INFO     | PanDA job id: 6679297241
[2025-06-05 00:32:24] 2025-06-04 22:17:39,832 | INFO     | task id: 45006595
[2025-06-05 00:32:24] 2025-06-04 22:17:39,832 | INFO     | errors: (none)
[2025-06-05 00:32:24] 2025-06-04 22:17:39,832 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | pilot state: finished 
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | transexitcode: 0
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | exeerrorcode: 0
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | exeerrordiag: 
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | exitcode: 0
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | exitmsg: OK
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | cpuconsumptiontime: 35111 s
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | nevents: 400
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | neventsw: 0
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | pid: 2681075
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | pgrp: 2681075
[2025-06-05 00:32:24] 2025-06-04 22:17:39,833 | INFO     | corecount: 12
[2025-06-05 00:32:24] 2025-06-04 22:17:39,834 | INFO     | event service: False
[2025-06-05 00:32:24] 2025-06-04 22:17:39,834 | INFO     | sizes: {0: 2397122, 1: 2397321, 12: 2397321, 23: 2397349, 34: 2397377, 42: 2397611, 44: 2397795, 6253: 2424618, 6255: 2433561, 6256: 2433617, 6306: 2433787}
[2025-06-05 00:32:24] 2025-06-04 22:17:39,834 | INFO     | --------------------------------------------------
[2025-06-05 00:32:24] 2025-06-04 22:17:39,834 | INFO     | 
[2025-06-05 00:32:24] 2025-06-04 22:17:39,834 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-06-05 00:32:24] 2025-06-04 22:17:40,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,028 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,028 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,028 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,034 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,034 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,034 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,034 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:32:24] 2025-06-04 22:17:40,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,034 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:32:24] 2025-06-04 22:17:40,034 | INFO     | job 6679297241 has completed (purged errors)
[2025-06-05 00:32:24] 2025-06-04 22:17:40,034 | INFO     | overall cleanup function is called
[2025-06-05 00:32:24] 2025-06-04 22:17:41,047 | INFO     | --- collectZombieJob: --- 10, [2681075]
[2025-06-05 00:32:24] 2025-06-04 22:17:41,047 | INFO     | zombie collector waiting for pid 2681075
[2025-06-05 00:32:24] 2025-06-04 22:17:41,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:32:24] 2025-06-04 22:17:41,047 | INFO     | collected zombie processes
[2025-06-05 00:32:24] 2025-06-04 22:17:41,047 | INFO     | will attempt to kill all subprocesses of pid=2681075
[2025-06-05 00:32:24] 2025-06-04 22:17:42,392 | INFO     | PID=2635504 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 00:32:24] 2025-06-04 22:17:42,392 | INFO     | .. there are 94 such processes running
[2025-06-05 00:32:24] 2025-06-04 22:17:42,688 | INFO     | process IDs to be killed: [2681075] (in reverse order)
[2025-06-05 00:32:24] 2025-06-04 22:17:43,223 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:32:24] 2025-06-04 22:17:43,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:32:24] 2025-06-04 22:17:43,257 | INFO     | did not find any defunct processes belonging to 2681075
[2025-06-05 00:32:24] 2025-06-04 22:17:43,288 | INFO     | did not find any defunct processes belonging to 2681075
[2025-06-05 00:32:24] 2025-06-04 22:17:43,288 | INFO     | ready for new job
[2025-06-05 00:32:24] 2025-06-04 22:17:43,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:32:24] 2025-06-04 22:17:43,290 | INFO     | **************************************
[2025-06-05 00:32:24] 2025-06-04 22:17:43,290 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:32:24] 2025-06-04 22:17:43,291 | INFO     | **************************************
[2025-06-05 00:32:24] 2025-06-04 22:17:43,291 | INFO     | 
[2025-06-05 00:32:24] 2025-06-04 22:17:43,297 | INFO     | architecture information:
[2025-06-05 00:32:24] 2025-06-04 22:17:43,304 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:32:24] 2025-06-04 22:17:43,435 | INFO     | cat /etc/os-release:
[2025-06-05 00:32:24] NAME="CentOS Linux"
[2025-06-05 00:32:24] VERSION="7 (Core)"
[2025-06-05 00:32:24] ID="centos"
[2025-06-05 00:32:24] ID_LIKE="rhel fedora"
[2025-06-05 00:32:24] VERSION_ID="7"
[2025-06-05 00:32:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:32:24] ANSI_COLOR="0;31"
[2025-06-05 00:32:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:32:24] HOME_URL="https://www.centos.org/"
[2025-06-05 00:32:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:32:24] 
[2025-06-05 00:32:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:32:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:32:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:32:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:32:24] 
[2025-06-05 00:32:24] 2025-06-04 22:17:43,435 | INFO     | **************************************
[2025-06-05 00:32:24] 2025-06-04 22:17:43,939 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-06-05 00:32:24] 2025-06-04 22:17:44,056 | INFO     | sufficient remaining disk space (1661474963456 B)
[2025-06-05 00:32:24] 2025-06-04 22:17:44,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:32:24] 2025-06-04 22:17:44,057 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:32:24] 2025-06-04 22:17:44,057 | INFO     | update_server=False
[2025-06-05 00:32:24] 2025-06-04 22:17:44,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:32:24] 2025-06-04 22:17:44,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:32:24] 2025-06-04 22:17:44,060 | INFO     | aborting loop
[2025-06-05 00:32:24] 2025-06-04 22:17:44,223 | INFO     | all job control threads have been joined
[2025-06-05 00:32:24] 2025-06-04 22:17:44,229 | INFO     | all data control threads have been joined
[2025-06-05 00:32:24] 2025-06-04 22:17:44,399 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:32:24] 2025-06-04 22:17:44,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:32:24] 2025-06-04 22:17:44,399 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:32:24] 2025-06-04 22:17:44,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:32:24] 2025-06-04 22:17:45,063 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:45,066 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:45,127 | INFO     | all payload control threads have been joined
[2025-06-05 00:32:24] 2025-06-04 22:17:45,153 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:45,229 | INFO     | [job] control thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:45,235 | INFO     | [data] control thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:45,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:32:24] 2025-06-04 22:17:45,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:32:24] 2025-06-04 22:17:45,522 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:45,666 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:45,840 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:45,859 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:45,977 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:46,133 | INFO     | [payload] control thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:46,259 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:46,332 | INFO     | [job] validate thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:46,512 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:47,394 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:49,485 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:32:24] 2025-06-04 22:17:51,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140372002637632)>', '<ExcThread(monitor, started 140371518539520)>']
[2025-06-05 00:32:24] 2025-06-04 22:17:51,440 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:32:24] 2025-06-04 22:17:51,440 | INFO     | [monitor] control thread has ended
[2025-06-05 00:32:24] 2025-06-04 22:17:56,424 | INFO     | all workflow threads have been joined
[2025-06-05 00:32:24] 2025-06-04 22:17:56,424 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:32:24] 2025-06-04 22:17:56,424 | INFO     | traces error code: 0
[2025-06-05 00:32:24] 2025-06-04 22:17:56,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:32:24] 2025-06-04 22:17:56,806 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:32:24] 2025-06-04 22:17:56,848 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:32:24] 2025-06-04 22:17:56,874 [wrapper] pilotpid: 2635504
[2025-06-05 00:32:24] 2025-06-04 22:17:56,916 [wrapper] Pilot exit status: 0
[2025-06-05 00:32:24] 2025-06-04 22:17:57,079 [wrapper] pandaids: 6679297241
[2025-06-05 00:32:24] 2025-06-04 22:17:57,453 [wrapper] cleanup supervisor_pilot 3669586 2635505
[2025-06-05 00:32:24] 2025-06-04 22:17:57,497 [wrapper] Test setup, not cleaning
[2025-06-05 00:32:24] 2025-06-04 22:17:57,545 [wrapper] apfmon messages muted
[2025-06-05 00:32:24] 2025-06-04 22:17:57,583 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:32:24] 2025-06-04 22:17:57,623 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:32:24]  *** Error codes and diagnostics ***
[2025-06-05 00:32:24]     "exeErrorCode": 0,
[2025-06-05 00:32:24]     "exeErrorDiag": "",
[2025-06-05 00:32:24]     "pilotErrorCode": 0,
[2025-06-05 00:32:24]     "pilotErrorDiag": "",
[2025-06-05 00:32:24]  *** Listing of results directory ***
[2025-06-05 00:32:24] total 391724
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:56 queuedata.json
[2025-06-05 00:32:24] -rwx------ 1 boinc boinc     37140 Jun  4 10:57 runpilot2-wrapper.sh
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:32:24] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:29 run_atlas
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:29 job.xml
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc      6664 Jun  4 22:29 init_data.xml
[2025-06-05 00:32:24] -rw-r--r-- 2 boinc boinc 215351011 Jun  4 22:29 EVNT.45006593._001745.pool.root.1
[2025-06-05 00:32:24] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:29 shared
[2025-06-05 00:32:24] -rw-r--r-- 2 boinc boinc    508888 Jun  4 22:29 input.tar.gz
[2025-06-05 00:32:24] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:29 start_atlas.sh
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:29 boinc_lockfile
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc      2525 Jun  4 22:29 pandaJob.out
[2025-06-05 00:32:24] -rw------- 1 boinc boinc    987032 Jun  4 22:31 agis_schedconf.cvmfs.json
[2025-06-05 00:32:24] -rw------- 1 boinc boinc   1598969 Jun  4 22:31 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:32:24] drwx------ 4 boinc boinc      4096 Jun  4 22:31 pilot3
[2025-06-05 00:32:24] -rw------- 1 boinc boinc 180053012 Jun  5 00:15 HITS.45006595._056122.pool.root.1
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc       529 Jun  5 00:15 boinc_task_state.xml
[2025-06-05 00:32:24] -rw------- 1 boinc boinc      1023 Jun  5 00:16 memory_monitor_summary.json
[2025-06-05 00:32:24] -rw------- 1 boinc boinc    381586 Jun  5 00:16 log.45006595._056122.job.log.tgz.1
[2025-06-05 00:32:24] -rw------- 1 boinc boinc        95 Jun  5 00:17 pilot_heartbeat.json
[2025-06-05 00:32:24] -rw------- 1 boinc boinc      7694 Jun  5 00:17 heartbeat.json
[2025-06-05 00:32:24] -rw------- 1 boinc boinc      4356 Jun  5 00:17 pilotlog.txt
[2025-06-05 00:32:24] -rw------- 1 boinc boinc    562733 Jun  5 00:17 log.45006595._056122.job.log.1
[2025-06-05 00:32:24] -rw------- 1 boinc boinc       357 Jun  5 00:17 output.list
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc       620 Jun  5 00:17 runtime_log
[2025-06-05 00:32:24] -rw------- 1 boinc boinc    962560 Jun  5 00:17 result.tar.gz
[2025-06-05 00:32:24] -rw------- 1 boinc boinc       663 Jun  5 00:17 ub2MDmU7yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnsnKDm89VhPo.diag
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc      8720 Jun  5 00:17 runtime_log.err
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc        26 Jun  5 00:32 wrapper_checkpoint.txt
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc      8192 Jun  5 00:32 boinc_mmap_file
[2025-06-05 00:32:24] -rw-r--r-- 1 boinc boinc     20970 Jun  5 00:32 stderr.txt
[2025-06-05 00:32:24] HITS file was successfully produced:
[2025-06-05 00:32:24] -rw------- 1 boinc boinc 180053012 Jun  5 00:15 shared/HITS.pool.root.1
[2025-06-05 00:32:24]  *** Contents of shared directory: ***
[2025-06-05 00:32:24] total 387604
[2025-06-05 00:32:24] -rw-r--r-- 2 boinc boinc 215351011 Jun  4 22:29 ATLAS.root_0
[2025-06-05 00:32:24] -rw-r--r-- 2 boinc boinc    508888 Jun  4 22:29 input.tar.gz
[2025-06-05 00:32:24] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:29 start_atlas.sh
[2025-06-05 00:32:24] -rw------- 1 boinc boinc 180053012 Jun  5 00:15 HITS.pool.root.1
[2025-06-05 00:32:24] -rw------- 1 boinc boinc    962560 Jun  5 00:17 result.tar.gz
00:32:25 (2613877): run_atlas exited; CPU time 35503.720406
00:32:25 (2613877): called boinc_finish(0)

</stderr_txt>
]]>

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