Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:37:11 (2728481): wrapper (7.7.26015): starting
22:37:11 (2728481): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 22:37:11] Arguments: --nthreads 12
[2025-06-04 22:37:11] Threads: 12
[2025-06-04 22:37:11] Checking for CVMFS
[2025-06-04 22:37:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:37:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:37:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:37:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:37:13] 2.12.7.0 9268 8925 225672 146793 0 390 42676324 46080000 39936 130560 0 57342976 99.938 10627027 19866 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-04 22:37:13] CVMFS is ok
[2025-06-04 22:37:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:37:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:37:13] Further information can be found at the LHC@home message board.
[2025-06-04 22:37:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:37:13] Checking for apptainer binary...
[2025-06-04 22:37:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:37:13] Running /usr/bin/apptainer --version
[2025-06-04 22:37:13] apptainer version 1.4.1-1.el9
[2025-06-04 22:37:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:37:14] mff2104.farm.particle.cz
[2025-06-04 22:37:14] apptainer works
[2025-06-04 22:37:14] Set ATHENA_PROC_NUMBER=12
[2025-06-04 22:37:14] Set ATHENA_CORE_NUMBER=12
[2025-06-04 22:37:14] Starting ATLAS job with PandaID=6679381862
[2025-06-04 22:37:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:12:54]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:12:54] 2025-06-04 22:11:55,480 | INFO     | monitor loop #386: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:11:55,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:11:57,985 | INFO     | monitor loop #387: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:11:57,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:00,493 | INFO     | monitor loop #388: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:00,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:03,001 | INFO     | monitor loop #389: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:03,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:04,648 | INFO     | 5606s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 00:12:54] 2025-06-04 22:12:05,509 | INFO     | monitor loop #390: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:05,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:08,014 | INFO     | monitor loop #391: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:08,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:10,519 | INFO     | monitor loop #392: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:10,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:12,911 | INFO     | PID=2740701 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 00:12:54] 2025-06-04 22:12:12,911 | INFO     | .. there are 95 such processes running
[2025-06-05 00:12:54] 2025-06-04 22:12:13,025 | INFO     | monitor loop #393: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:13,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:15,536 | INFO     | monitor loop #394: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:15,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:18,043 | INFO     | monitor loop #395: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:18,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:20,548 | INFO     | monitor loop #396: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:20,548 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:23,059 | INFO     | monitor loop #397: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:23,059 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:25,565 | INFO     | monitor loop #398: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:25,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:28,071 | INFO     | monitor loop #399: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:28,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:30,577 | INFO     | monitor loop #400: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:30,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:33,086 | INFO     | monitor loop #401: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:33,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:35,595 | INFO     | monitor loop #402: job 0:6679381862 is in state 'finished'
[2025-06-05 00:12:54] 2025-06-04 22:12:35,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:12:54] 2025-06-04 22:12:36,010 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 00:12:54] 2025-06-04 22:12:36,010 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6679381862/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:12:54] 2025-06-04 22:12:36,011 | INFO     | extracted standard info from prmon json
[2025-06-05 00:12:54] 2025-06-04 22:12:36,011 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:12:54] 2025-06-04 22:12:36,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:12:54] 2025-06-04 22:12:36,011 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:12:54] 2025-06-04 22:12:36,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:12:54] 2025-06-04 22:12:36,024 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:12:54] 2025-06-04 22:12:36,024 | INFO     | sum of square deviations: 164765880.0
[2025-06-05 00:12:54] 2025-06-04 22:12:36,024 | INFO     | sum of deviations: 23060488739.000004
[2025-06-05 00:12:54] 2025-06-04 22:12:36,024 | INFO     | mean x: 1749072485.0
[2025-06-05 00:12:54] 2025-06-04 22:12:36,025 | INFO     | mean y: 2560631.234567901
[2025-06-05 00:12:54] 2025-06-04 22:12:36,025 | INFO     | -- intersect: -244796097586.33603
[2025-06-05 00:12:54] 2025-06-04 22:12:36,025 | INFO     | intersect: -244796097586.33603
[2025-06-05 00:12:54] 2025-06-04 22:12:36,025 | INFO     | chi2: 2.158338498644447
[2025-06-05 00:12:54] 2025-06-04 22:12:36,025 | INFO     | -- intersect: -244796097586.33603
[2025-06-05 00:12:54] 2025-06-04 22:12:36,025 | INFO     | current memory leak: 139.96 B/s (using 81 data points, chi2=2.16)
[2025-06-05 00:12:54] 2025-06-04 22:12:36,026 | INFO     | ..............................
[2025-06-05 00:12:54] 2025-06-04 22:12:36,026 | INFO     | . Timing measurements:
[2025-06-05 00:12:54] 2025-06-04 22:12:36,026 | INFO     | . get job = 0 s
[2025-06-05 00:12:54] 2025-06-04 22:12:36,026 | INFO     | . initial setup = 6 s
[2025-06-05 00:12:54] 2025-06-04 22:12:36,026 | INFO     | . payload setup = 75 s
[2025-06-05 00:12:54] 2025-06-04 22:12:36,026 | INFO     | . stage-in = 0 s
[2025-06-05 00:12:54] 2025-06-04 22:12:36,026 | INFO     | . payload execution = 5405 s
[2025-06-05 00:12:54] 2025-06-04 22:12:36,026 | INFO     | . stage-out = 1 s
[2025-06-05 00:12:54] 2025-06-04 22:12:36,026 | INFO     | . log creation = 0 s
[2025-06-05 00:12:54] 2025-06-04 22:12:36,026 | INFO     | ..............................
[2025-06-05 00:12:54] 2025-06-04 22:12:36,443 | INFO     | 
[2025-06-05 00:12:54] 2025-06-04 22:12:36,443 | INFO     | job summary report
[2025-06-05 00:12:54] 2025-06-04 22:12:36,443 | INFO     | --------------------------------------------------
[2025-06-05 00:12:54] 2025-06-04 22:12:36,443 | INFO     | PanDA job id: 6679381862
[2025-06-05 00:12:54] 2025-06-04 22:12:36,443 | INFO     | task id: 45006595
[2025-06-05 00:12:54] 2025-06-04 22:12:36,443 | INFO     | errors: (none)
[2025-06-05 00:12:54] 2025-06-04 22:12:36,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:12:54] 2025-06-04 22:12:36,443 | INFO     | pilot state: finished 
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | transexitcode: 0
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | exeerrorcode: 0
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | exeerrordiag: 
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | exitcode: 0
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | exitmsg: OK
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | cpuconsumptiontime: 34310 s
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | nevents: 400
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | neventsw: 0
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | pid: 2774063
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | pgrp: 2774063
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | corecount: 12
[2025-06-05 00:12:54] 2025-06-04 22:12:36,444 | INFO     | event service: False
[2025-06-05 00:12:54] 2025-06-04 22:12:36,445 | INFO     | sizes: {0: 2397071, 1: 2397270, 12: 2397270, 23: 2397298, 33: 2397326, 44: 2397382, 45: 2397744, 55: 2397772, 5485: 2424215, 5488: 2433158, 5491: 2433214, 5533: 24
[2025-06-05 00:12:54] 2025-06-04 22:12:36,445 | INFO     | --------------------------------------------------
[2025-06-05 00:12:54] 2025-06-04 22:12:36,445 | INFO     | 
[2025-06-05 00:12:54] 2025-06-04 22:12:36,445 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-06-05 00:12:54] 2025-06-04 22:12:36,636 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,637 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,637 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,637 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,637 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,637 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,637 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,637 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,637 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,638 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:12:54] 2025-06-04 22:12:36,638 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,638 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:12:54] 2025-06-04 22:12:36,638 | INFO     | job 6679381862 has completed (purged errors)
[2025-06-05 00:12:54] 2025-06-04 22:12:36,639 | INFO     | overall cleanup function is called
[2025-06-05 00:12:54] 2025-06-04 22:12:36,848 | INFO     | PID=2740701 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 00:12:54] 2025-06-04 22:12:36,848 | INFO     | .. there are 95 such processes running
[2025-06-05 00:12:54] 2025-06-04 22:12:37,658 | INFO     | --- collectZombieJob: --- 10, [2774063]
[2025-06-05 00:12:54] 2025-06-04 22:12:37,658 | INFO     | zombie collector waiting for pid 2774063
[2025-06-05 00:12:54] 2025-06-04 22:12:37,658 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:12:54] 2025-06-04 22:12:37,658 | INFO     | collected zombie processes
[2025-06-05 00:12:54] 2025-06-04 22:12:37,658 | INFO     | will attempt to kill all subprocesses of pid=2774063
[2025-06-05 00:12:54] 2025-06-04 22:12:38,884 | INFO     | process IDs to be killed: [2774063] (in reverse order)
[2025-06-05 00:12:54] 2025-06-04 22:12:39,467 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:12:54] 2025-06-04 22:12:39,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:12:54] 2025-06-04 22:12:39,526 | INFO     | did not find any defunct processes belonging to 2774063
[2025-06-05 00:12:54] 2025-06-04 22:12:39,559 | INFO     | did not find any defunct processes belonging to 2774063
[2025-06-05 00:12:54] 2025-06-04 22:12:39,559 | INFO     | ready for new job
[2025-06-05 00:12:54] 2025-06-04 22:12:39,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:12:54] 2025-06-04 22:12:39,561 | INFO     | **************************************
[2025-06-05 00:12:54] 2025-06-04 22:12:39,561 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:12:54] 2025-06-04 22:12:39,561 | INFO     | **************************************
[2025-06-05 00:12:54] 2025-06-04 22:12:39,561 | INFO     | 
[2025-06-05 00:12:54] 2025-06-04 22:12:39,567 | INFO     | architecture information:
[2025-06-05 00:12:54] 2025-06-04 22:12:39,576 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:12:54] 2025-06-04 22:12:39,661 | INFO     | cat /etc/os-release:
[2025-06-05 00:12:54] NAME="CentOS Linux"
[2025-06-05 00:12:54] VERSION="7 (Core)"
[2025-06-05 00:12:54] ID="centos"
[2025-06-05 00:12:54] ID_LIKE="rhel fedora"
[2025-06-05 00:12:54] VERSION_ID="7"
[2025-06-05 00:12:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:12:54] ANSI_COLOR="0;31"
[2025-06-05 00:12:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:12:54] HOME_URL="https://www.centos.org/"
[2025-06-05 00:12:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:12:54] 
[2025-06-05 00:12:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:12:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:12:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:12:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:12:54] 
[2025-06-05 00:12:54] 2025-06-04 22:12:39,661 | INFO     | **************************************
[2025-06-05 00:12:54] 2025-06-04 22:12:40,166 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-06-05 00:12:54] 2025-06-04 22:12:40,317 | INFO     | sufficient remaining disk space (1660852109312 B)
[2025-06-05 00:12:54] 2025-06-04 22:12:40,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:12:54] 2025-06-04 22:12:40,318 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:12:54] 2025-06-04 22:12:40,318 | INFO     | update_server=False
[2025-06-05 00:12:54] 2025-06-04 22:12:40,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:12:54] 2025-06-04 22:12:40,319 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:12:54] 2025-06-04 22:12:40,615 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 00:12:54] 2025-06-04 22:12:40,615 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 00:12:54] 2025-06-04 22:12:40,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:12:54] 2025-06-04 22:12:40,615 | INFO     | will abort loop
[2025-06-05 00:12:54] 2025-06-04 22:12:40,868 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:12:54] 2025-06-04 22:12:40,868 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:12:54] 2025-06-04 22:12:40,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:12:54] 2025-06-04 22:12:41,033 | INFO     | all data control threads have been joined
[2025-06-05 00:12:54] 2025-06-04 22:12:41,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:12:54] 2025-06-04 22:12:41,324 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:41,413 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:12:54] 2025-06-04 22:12:41,414 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:41,479 | INFO     | all payload control threads have been joined
[2025-06-05 00:12:54] 2025-06-04 22:12:41,623 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:41,966 | INFO     | all job control threads have been joined
[2025-06-05 00:12:54] 2025-06-04 22:12:42,039 | INFO     | [data] control thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:42,268 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:42,326 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:42,379 | INFO     | [job] validate thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:42,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:42,425 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:42,486 | INFO     | [payload] control thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:42,546 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:42,717 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:42,809 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:42,896 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:42,972 | INFO     | [job] control thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:45,268 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:12:54] 2025-06-04 22:12:46,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140136943765312)>', '<ExcThread(monitor, started 140136411010816)>']
[2025-06-05 00:12:54] 2025-06-04 22:12:46,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:12:54] 2025-06-04 22:12:46,905 | INFO     | [monitor] control thread has ended
[2025-06-05 00:12:54] 2025-06-04 22:12:51,680 | INFO     | all workflow threads have been joined
[2025-06-05 00:12:54] 2025-06-04 22:12:51,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:12:54] 2025-06-04 22:12:51,680 | INFO     | traces error code: 0
[2025-06-05 00:12:54] 2025-06-04 22:12:51,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:12:54] 2025-06-04 22:12:51,933 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:12:54] 2025-06-04 22:12:51,987 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:12:54] 2025-06-04 22:12:52,026 [wrapper] pilotpid: 2740701
[2025-06-05 00:12:54] 2025-06-04 22:12:52,077 [wrapper] Pilot exit status: 0
[2025-06-05 00:12:54] 2025-06-04 22:12:52,214 [wrapper] pandaids: 6679381862
[2025-06-05 00:12:54] 2025-06-04 22:12:52,493 [wrapper] cleanup supervisor_pilot 3590663 2740702
[2025-06-05 00:12:54] 2025-06-04 22:12:52,536 [wrapper] Test setup, not cleaning
[2025-06-05 00:12:54] 2025-06-04 22:12:52,566 [wrapper] apfmon messages muted
[2025-06-05 00:12:54] 2025-06-04 22:12:52,605 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:12:54] 2025-06-04 22:12:52,638 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:12:54]  *** Error codes and diagnostics ***
[2025-06-05 00:12:54]     "exeErrorCode": 0,
[2025-06-05 00:12:54]     "exeErrorDiag": "",
[2025-06-05 00:12:54]     "pilotErrorCode": 0,
[2025-06-05 00:12:54]     "pilotErrorDiag": "",
[2025-06-05 00:12:54]  *** Listing of results directory ***
[2025-06-05 00:12:54] total 394080
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc      5111 Jun  4 11:01 queuedata.json
[2025-06-05 00:12:54] -rwx------ 1 boinc boinc     37140 Jun  4 11:02 runpilot2-wrapper.sh
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:12:54] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:37 run_atlas
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:37 job.xml
[2025-06-05 00:12:54] -rw-r--r-- 2 boinc boinc 215010117 Jun  4 22:37 EVNT.45006593._001699.pool.root.1
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc      6664 Jun  4 22:37 init_data.xml
[2025-06-05 00:12:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:37 start_atlas.sh
[2025-06-05 00:12:54] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:37 shared
[2025-06-05 00:12:54] -rw-r--r-- 2 boinc boinc    508884 Jun  4 22:37 input.tar.gz
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:37 boinc_lockfile
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc      2524 Jun  4 22:37 pandaJob.out
[2025-06-05 00:12:54] -rw------- 1 boinc boinc    987032 Jun  4 22:38 agis_schedconf.cvmfs.json
[2025-06-05 00:12:54] -rw------- 1 boinc boinc   1598969 Jun  4 22:38 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:12:54] drwx------ 4 boinc boinc      4096 Jun  4 22:38 pilot3
[2025-06-05 00:12:54] -rw------- 1 boinc boinc 182956598 Jun  5 00:10 HITS.45006595._056245.pool.root.1
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc       529 Jun  5 00:10 boinc_task_state.xml
[2025-06-05 00:12:54] -rw------- 1 boinc boinc      1025 Jun  5 00:11 memory_monitor_summary.json
[2025-06-05 00:12:54] -rw------- 1 boinc boinc    372655 Jun  5 00:11 log.45006595._056245.job.log.tgz.1
[2025-06-05 00:12:54] -rw------- 1 boinc boinc        95 Jun  5 00:12 pilot_heartbeat.json
[2025-06-05 00:12:54] -rw------- 1 boinc boinc      7696 Jun  5 00:12 heartbeat.json
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc        26 Jun  5 00:12 wrapper_checkpoint.txt
[2025-06-05 00:12:54] -rw------- 1 boinc boinc      4542 Jun  5 00:12 pilotlog.txt
[2025-06-05 00:12:54] -rw------- 1 boinc boinc    498144 Jun  5 00:12 log.45006595._056245.job.log.1
[2025-06-05 00:12:54] -rw------- 1 boinc boinc       357 Jun  5 00:12 output.list
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc       620 Jun  5 00:12 runtime_log
[2025-06-05 00:12:54] -rw------- 1 boinc boinc    890880 Jun  5 00:12 result.tar.gz
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc      8720 Jun  5 00:12 runtime_log.err
[2025-06-05 00:12:54] -rw------- 1 boinc boinc       663 Jun  5 00:12 qtVNDm5Bzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsunKDm7oaCDo.diag
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc      8192 Jun  5 00:12 boinc_mmap_file
[2025-06-05 00:12:54] -rw-r--r-- 1 boinc boinc     22496 Jun  5 00:12 stderr.txt
[2025-06-05 00:12:54] HITS file was successfully produced:
[2025-06-05 00:12:54] -rw------- 1 boinc boinc 182956598 Jun  5 00:10 shared/HITS.pool.root.1
[2025-06-05 00:12:54]  *** Contents of shared directory: ***
[2025-06-05 00:12:54] total 390036
[2025-06-05 00:12:54] -rw-r--r-- 2 boinc boinc 215010117 Jun  4 22:37 ATLAS.root_0
[2025-06-05 00:12:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:37 start_atlas.sh
[2025-06-05 00:12:54] -rw-r--r-- 2 boinc boinc    508884 Jun  4 22:37 input.tar.gz
[2025-06-05 00:12:54] -rw------- 1 boinc boinc 182956598 Jun  5 00:10 HITS.pool.root.1
[2025-06-05 00:12:54] -rw------- 1 boinc boinc    890880 Jun  5 00:12 result.tar.gz
00:12:56 (2728481): run_atlas exited; CPU time 34642.612214
00:12:56 (2728481): called boinc_finish(0)

</stderr_txt>
]]>

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