Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:12:57 (26036): wrapper (7.7.26015): starting
23:12:57 (26036): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 23:12:57] Arguments: --nthreads 8
[2025-06-04 23:12:57] Threads: 8
[2025-06-04 23:12:57] Checking for CVMFS
[2025-06-04 23:13:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:13:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:24:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:24:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:24:36] 2.11.2.0 20781 33732 91664 146795 0 16 14183554 25165825 3135 130560 0 17927666 99.768 20422691 2320 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 23:24:36] CVMFS is ok
[2025-06-04 23:24:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:24:37] Checking for apptainer binary...
[2025-06-04 23:24:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:24:37] Running /usr/bin/apptainer --version
[2025-06-04 23:24:37] apptainer version 1.3.2-1.el7
[2025-06-04 23:24:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:24:54] cg-vwn441.simple-grid.lan
[2025-06-04 23:24:54] apptainer works
[2025-06-04 23:24:54] Set ATHENA_PROC_NUMBER=8
[2025-06-04 23:24:54] Set ATHENA_CORE_NUMBER=8
[2025-06-04 23:24:54] Starting ATLAS job with PandaID=6679267228
[2025-06-04 23:24:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:31:05]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:31:05] 2025-06-05 01:27:29,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:31:05] 2025-06-05 01:27:31,963 | INFO     | monitor loop #1058: job 0:6679267228 is in state 'finished'
[2025-06-05 03:31:05] 2025-06-05 01:27:31,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:31:05] 2025-06-05 01:27:32,659 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 03:31:05] 2025-06-05 01:27:32,660 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6679267228/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:31:05] 2025-06-05 01:27:32,661 | INFO     | extracted standard info from prmon json
[2025-06-05 03:31:05] 2025-06-05 01:27:32,661 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:31:05] 2025-06-05 01:27:32,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:31:05] 2025-06-05 01:27:32,661 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:31:05] 2025-06-05 01:27:32,661 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:31:05] 2025-06-05 01:27:32,666 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:31:05] 2025-06-05 01:27:32,667 | INFO     | sum of square deviations: 3579276412.5
[2025-06-05 03:31:05] 2025-06-05 01:27:32,669 | INFO     | sum of deviations: -4156843627.4999943
[2025-06-05 03:31:05] 2025-06-05 01:27:32,669 | INFO     | mean x: 1749079846.5
[2025-06-05 03:31:05] 2025-06-05 01:27:32,669 | INFO     | mean y: 2479933.0398230087
[2025-06-05 03:31:05] 2025-06-05 01:27:32,669 | INFO     | -- intersect: 2033798718.1777098
[2025-06-05 03:31:05] 2025-06-05 01:27:32,669 | INFO     | intersect: 2033798718.1777098
[2025-06-05 03:31:05] 2025-06-05 01:27:32,670 | INFO     | chi2: 3.209301259502288
[2025-06-05 03:31:05] 2025-06-05 01:27:32,670 | INFO     | sum of square deviations: 3346927870.0
[2025-06-05 03:31:05] 2025-06-05 01:27:32,672 | INFO     | sum of deviations: 10779439625.000002
[2025-06-05 03:31:05] 2025-06-05 01:27:32,672 | INFO     | mean x: 1749079694.0
[2025-06-05 03:31:05] 2025-06-05 01:27:32,672 | INFO     | mean y: 2489560.9502262445
[2025-06-05 03:31:05] 2025-06-05 01:27:32,672 | INFO     | -- intersect: -5630765678.812822
[2025-06-05 03:31:05] 2025-06-05 01:27:32,672 | INFO     | intersect: -5630765678.812822
[2025-06-05 03:31:05] 2025-06-05 01:27:32,673 | INFO     | chi2: 2.4490877440968504
[2025-06-05 03:31:05] 2025-06-05 01:27:32,673 | INFO     | current chi2=2.4490877440968504 (change=23.687820305262797 %)
[2025-06-05 03:31:05] 2025-06-05 01:27:32,673 | INFO     | right removable region: 220
[2025-06-05 03:31:05] 2025-06-05 01:27:32,673 | INFO     | sum of square deviations: 3346927870.0
[2025-06-05 03:31:05] 2025-06-05 01:27:32,675 | INFO     | sum of deviations: -51590945200.0
[2025-06-05 03:31:05] 2025-06-05 01:27:32,675 | INFO     | mean x: 1749079999.0
[2025-06-05 03:31:05] 2025-06-05 01:27:32,676 | INFO     | mean y: 2510835.5429864256
[2025-06-05 03:31:05] 2025-06-05 01:27:32,676 | INFO     | -- intersect: 26963561053.462696
[2025-06-05 03:31:05] 2025-06-05 01:27:32,676 | INFO     | intersect: 26963561053.462696
[2025-06-05 03:31:05] 2025-06-05 01:27:32,676 | INFO     | chi2: 0.9870356403121578
[2025-06-05 03:31:05] 2025-06-05 01:27:32,676 | INFO     | current chi2=0.9870356403121578 (change=69.24453142597055 %)
[2025-06-05 03:31:05] 2025-06-05 01:27:32,677 | INFO     | sum of square deviations: 3124858590.0
[2025-06-05 03:31:05] 2025-06-05 01:27:32,678 | INFO     | sum of deviations: -52525778801.0
[2025-06-05 03:31:05] 2025-06-05 01:27:32,679 | INFO     | mean x: 1749080151.5
[2025-06-05 03:31:05] 2025-06-05 01:27:32,679 | INFO     | mean y: 2511441.1944444445
[2025-06-05 03:31:05] 2025-06-05 01:27:32,679 | INFO     | -- intersect: 29402816926.028736
[2025-06-05 03:31:05] 2025-06-05 01:27:32,679 | INFO     | intersect: 29402816926.028736
[2025-06-05 03:31:05] 2025-06-05 01:27:32,679 | INFO     | chi2: 0.9650599497954148
[2025-06-05 03:31:05] 2025-06-05 01:27:32,680 | INFO     | current chi2=0.9650599497954148 (change=2.2264333342404026 %)
[2025-06-05 03:31:05] 2025-06-05 01:27:32,680 | INFO     | left removable region: 20
[2025-06-05 03:31:05] 2025-06-05 01:27:32,680 | INFO     | sum of square deviations: 2480604650.0
[2025-06-05 03:31:05] 2025-06-05 01:27:32,682 | INFO     | sum of deviations: -23902669714.5
[2025-06-05 03:31:05] 2025-06-05 01:27:32,682 | INFO     | mean x: 1749080273.5
[2025-06-05 03:31:05] 2025-06-05 01:27:32,682 | INFO     | mean y: 2512159.495
[2025-06-05 03:31:05] 2025-06-05 01:27:32,682 | INFO     | -- intersect: 16856341761.732433
[2025-06-05 03:31:05] 2025-06-05 01:27:32,682 | INFO     | intersect: 16856341761.732433
[2025-06-05 03:31:05] 2025-06-05 01:27:32,682 | INFO     | chi2: 0.142094158134213
[2025-06-05 03:31:05] 2025-06-05 01:27:32,683 | INFO     | -- intersect: 16856341761.732433
[2025-06-05 03:31:05] 2025-06-05 01:27:32,683 | INFO     | current memory leak: -9.64 B/s (using 200 data points, chi2=0.14)
[2025-06-05 03:31:05] 2025-06-05 01:27:32,684 | INFO     | ..............................
[2025-06-05 03:31:05] 2025-06-05 01:27:32,684 | INFO     | . Timing measurements:
[2025-06-05 03:31:05] 2025-06-05 01:27:32,684 | INFO     | . get job = 0 s
[2025-06-05 03:31:05] 2025-06-05 01:27:32,684 | INFO     | . initial setup = 10 s
[2025-06-05 03:31:05] 2025-06-05 01:27:32,684 | INFO     | . payload setup = 163 s
[2025-06-05 03:31:05] 2025-06-05 01:27:32,684 | INFO     | . stage-in = 0 s
[2025-06-05 03:31:05] 2025-06-05 01:27:32,684 | INFO     | . payload execution = 13918 s
[2025-06-05 03:31:05] 2025-06-05 01:27:32,684 | INFO     | . stage-out = 2 s
[2025-06-05 03:31:05] 2025-06-05 01:27:32,684 | INFO     | . log creation = 0 s
[2025-06-05 03:31:05] 2025-06-05 01:27:32,684 | INFO     | ..............................
[2025-06-05 03:31:05] 2025-06-05 01:27:33,284 | INFO     | 
[2025-06-05 03:31:05] 2025-06-05 01:27:33,284 | INFO     | job summary report
[2025-06-05 03:31:05] 2025-06-05 01:27:33,284 | INFO     | --------------------------------------------------
[2025-06-05 03:31:05] 2025-06-05 01:27:33,284 | INFO     | PanDA job id: 6679267228
[2025-06-05 03:31:05] 2025-06-05 01:27:33,284 | INFO     | task id: 45006595
[2025-06-05 03:31:05] 2025-06-05 01:27:33,284 | INFO     | errors: (none)
[2025-06-05 03:31:05] 2025-06-05 01:27:33,284 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | pilot state: finished 
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | transexitcode: 0
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | exeerrorcode: 0
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | exeerrordiag: 
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | exitcode: 0
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | exitmsg: OK
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | cpuconsumptiontime: 51888 s
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | nevents: 400
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | neventsw: 0
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | pid: 16366
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | pgrp: 16366
[2025-06-05 03:31:05] 2025-06-05 01:27:33,285 | INFO     | corecount: 8
[2025-06-05 03:31:05] 2025-06-05 01:27:33,286 | INFO     | event service: False
[2025-06-05 03:31:05] 2025-06-05 01:27:33,286 | INFO     | sizes: {0: 2396464, 1: 2397149, 2: 2397348, 13: 2397348, 23: 2397404, 34: 2397432, 45: 2397588, 56: 2397616, 66: 2397644, 77: 2397672, 88: 2397728, 96: 2398242, 99
[2025-06-05 03:31:05] 2025-06-05 01:27:33,286 | INFO     | --------------------------------------------------
[2025-06-05 03:31:05] 2025-06-05 01:27:33,286 | INFO     | 
[2025-06-05 03:31:05] 2025-06-05 01:27:33,286 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 03:31:05] 2025-06-05 01:27:33,744 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,745 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,745 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,746 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:31:05] 2025-06-05 01:27:33,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,746 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:31:05] 2025-06-05 01:27:33,747 | INFO     | job 6679267228 has completed (purged errors)
[2025-06-05 03:31:05] 2025-06-05 01:27:33,747 | INFO     | overall cleanup function is called
[2025-06-05 03:31:05] 2025-06-05 01:27:34,760 | INFO     | --- collectZombieJob: --- 10, [16366]
[2025-06-05 03:31:05] 2025-06-05 01:27:34,760 | INFO     | zombie collector waiting for pid 16366
[2025-06-05 03:31:05] 2025-06-05 01:27:34,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:31:05] 2025-06-05 01:27:34,760 | INFO     | collected zombie processes
[2025-06-05 03:31:05] 2025-06-05 01:27:34,760 | INFO     | will attempt to kill all subprocesses of pid=16366
[2025-06-05 03:31:05] 2025-06-05 01:27:34,881 | INFO     | process IDs to be killed: [16366] (in reverse order)
[2025-06-05 03:31:05] 2025-06-05 01:27:35,808 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:31:05] 2025-06-05 01:27:35,809 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:31:05] 2025-06-05 01:27:35,812 | INFO     | did not find any defunct processes belonging to 16366
[2025-06-05 03:31:05] 2025-06-05 01:27:35,816 | INFO     | did not find any defunct processes belonging to 16366
[2025-06-05 03:31:05] 2025-06-05 01:27:35,816 | INFO     | ready for new job
[2025-06-05 03:31:05] 2025-06-05 01:27:35,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:31:05] 2025-06-05 01:27:35,818 | INFO     | **************************************
[2025-06-05 03:31:05] 2025-06-05 01:27:35,818 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:31:05] 2025-06-05 01:27:35,818 | INFO     | **************************************
[2025-06-05 03:31:05] 2025-06-05 01:27:35,819 | INFO     | 
[2025-06-05 03:31:05] 2025-06-05 01:27:35,819 | INFO     | pilot is running in a VM
[2025-06-05 03:31:05] 2025-06-05 01:27:35,819 | INFO     | architecture information:
[2025-06-05 03:31:05] 2025-06-05 01:27:35,830 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:31:05] 2025-06-05 01:27:36,080 | INFO     | cat /etc/os-release:
[2025-06-05 03:31:05] NAME="CentOS Linux"
[2025-06-05 03:31:05] VERSION="7 (Core)"
[2025-06-05 03:31:05] ID="centos"
[2025-06-05 03:31:05] ID_LIKE="rhel fedora"
[2025-06-05 03:31:05] VERSION_ID="7"
[2025-06-05 03:31:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:31:05] ANSI_COLOR="0;31"
[2025-06-05 03:31:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:31:05] HOME_URL="https://www.centos.org/"
[2025-06-05 03:31:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:31:05] 
[2025-06-05 03:31:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:31:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:31:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:31:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:31:05] 
[2025-06-05 03:31:05] 2025-06-05 01:27:36,081 | INFO     | **************************************
[2025-06-05 03:31:05] 2025-06-05 01:27:36,583 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 03:31:05] 2025-06-05 01:27:36,753 | INFO     | sufficient remaining disk space (497169727488 B)
[2025-06-05 03:31:05] 2025-06-05 01:27:36,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:31:05] 2025-06-05 01:27:36,753 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:31:05] 2025-06-05 01:27:36,753 | INFO     | update_server=False
[2025-06-05 03:31:05] 2025-06-05 01:27:36,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:31:05] 2025-06-05 01:27:36,755 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:31:05] 2025-06-05 01:27:36,755 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:31:05] 2025-06-05 01:27:36,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:31:05] 2025-06-05 01:27:36,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:31:05] 2025-06-05 01:27:36,854 | INFO     | all data control threads have been joined
[2025-06-05 03:31:05] 2025-06-05 01:27:36,979 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 03:31:05] 2025-06-05 01:27:36,979 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 03:31:05] 2025-06-05 01:27:36,979 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:31:05] 2025-06-05 01:27:36,979 | INFO     | will abort loop
[2025-06-05 03:31:05] 2025-06-05 01:27:37,278 | INFO     | all payload control threads have been joined
[2025-06-05 03:31:05] 2025-06-05 01:27:37,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:31:05] 2025-06-05 01:27:37,760 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:37,828 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:37,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:31:05] 2025-06-05 01:27:37,860 | INFO     | [data] control thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:37,885 | INFO     | all job control threads have been joined
[2025-06-05 03:31:05] 2025-06-05 01:27:37,986 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:38,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:31:05] 2025-06-05 01:27:38,262 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:38,274 | INFO     | [job] validate thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:38,284 | INFO     | [payload] control thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:38,559 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:38,630 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:38,651 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:38,683 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:38,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:38,848 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:38,891 | INFO     | [job] control thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:39,624 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:42,202 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:31:05] 2025-06-05 01:27:43,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168845555520)>', '<ExcThread(monitor, started 140168270968576)>']
[2025-06-05 03:31:05] 2025-06-05 01:27:43,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:31:05] 2025-06-05 01:27:43,798 | INFO     | [monitor] control thread has ended
[2025-06-05 03:31:05] 2025-06-05 01:27:45,742 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-06-05 03:31:05] 2025-06-05 01:27:48,775 | INFO     | all workflow threads have been joined
[2025-06-05 03:31:05] 2025-06-05 01:27:48,775 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:31:05] 2025-06-05 01:27:48,775 | INFO     | traces error code: 0
[2025-06-05 03:31:05] 2025-06-05 01:27:48,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:31:05] 2025-06-05 01:27:49,202 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:31:05] 2025-06-05 01:27:49,299 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:31:05] 2025-06-05 01:27:49,388 [wrapper] pilotpid: 7748
[2025-06-05 03:31:05] 2025-06-05 01:27:49,490 [wrapper] Pilot exit status: 0
[2025-06-05 03:31:05] 2025-06-05 01:27:49,980 [wrapper] pandaids: 6679267228
[2025-06-05 03:31:05] 2025-06-05 01:27:50,799 [wrapper] cleanup supervisor_pilot 22895 7749
[2025-06-05 03:31:05] 2025-06-05 01:27:50,871 [wrapper] Test setup, not cleaning
[2025-06-05 03:31:05] 2025-06-05 01:27:50,962 [wrapper] apfmon messages muted
[2025-06-05 03:31:05] 2025-06-05 01:27:51,002 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:31:05] 2025-06-05 01:27:51,082 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:31:05]  *** Error codes and diagnostics ***
[2025-06-05 03:31:05]     "exeErrorCode": 0,
[2025-06-05 03:31:05]     "exeErrorDiag": "",
[2025-06-05 03:31:05]     "pilotErrorCode": 0,
[2025-06-05 03:31:05]     "pilotErrorDiag": "",
[2025-06-05 03:31:05]  *** Listing of results directory ***
[2025-06-05 03:31:05] total 390120
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc      5111 Jun  4 10:56 queuedata.json
[2025-06-05 03:31:05] -rwx------. 1 boinc boinc     37140 Jun  4 10:56 runpilot2-wrapper.sh
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc       100 Jun  4 23:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:31:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 23:12 run_atlas
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc       105 Jun  4 23:12 job.xml
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc      6392 Jun  4 23:12 init_data.xml
[2025-06-05 03:31:05] -rw-r--r--. 2 boinc boinc 216937055 Jun  4 23:12 EVNT.45006593._001547.pool.root.1
[2025-06-05 03:31:05] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:12 start_atlas.sh
[2025-06-05 03:31:05] drwxrwx--x. 2 boinc boinc        68 Jun  4 23:12 shared
[2025-06-05 03:31:05] -rw-r--r--. 2 boinc boinc    508888 Jun  4 23:12 input.tar.gz
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc         0 Jun  4 23:12 boinc_lockfile
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc      2525 Jun  4 23:24 pandaJob.out
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc    987032 Jun  4 23:27 agis_schedconf.cvmfs.json
[2025-06-05 03:31:05] drwx------. 4 boinc boinc      4096 Jun  4 23:27 pilot3
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc 175528989 Jun  5 03:24 HITS.45006595._056080.pool.root.1
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc       531 Jun  5 03:25 boinc_task_state.xml
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc      1017 Jun  5 03:25 memory_monitor_summary.json
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc   1598969 Jun  5 03:26 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc    381005 Jun  5 03:26 log.45006595._056080.job.log.tgz.1
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc        95 Jun  5 03:27 pilot_heartbeat.json
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc      7690 Jun  5 03:27 heartbeat.json
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc      4725 Jun  5 03:27 pilotlog.txt
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc   1218101 Jun  5 03:27 log.45006595._056080.job.log.1
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc       357 Jun  5 03:27 output.list
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc       620 Jun  5 03:27 runtime_log
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc   1617920 Jun  5 03:27 result.tar.gz
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc       657 Jun  5 03:27 s7ILDmU6yg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmA0aKDm2KnENn.diag
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc      8659 Jun  5 03:27 runtime_log.err
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc      8192 Jun  5 03:31 boinc_mmap_file
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc        28 Jun  5 03:31 wrapper_checkpoint.txt
[2025-06-05 03:31:05] -rw-r--r--. 1 boinc boinc     20748 Jun  5 03:31 stderr.txt
[2025-06-05 03:31:05] HITS file was successfully produced:
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc 175528989 Jun  5 03:24 shared/HITS.pool.root.1
[2025-06-05 03:31:05]  *** Contents of shared directory: ***
[2025-06-05 03:31:05] total 385368
[2025-06-05 03:31:05] -rw-r--r--. 2 boinc boinc 216937055 Jun  4 23:12 ATLAS.root_0
[2025-06-05 03:31:05] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:12 start_atlas.sh
[2025-06-05 03:31:05] -rw-r--r--. 2 boinc boinc    508888 Jun  4 23:12 input.tar.gz
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc 175528989 Jun  5 03:24 HITS.pool.root.1
[2025-06-05 03:31:05] -rw-------. 1 boinc boinc   1617920 Jun  5 03:27 result.tar.gz
03:31:07 (26036): run_atlas exited; CPU time 52092.219867
03:31:07 (26036): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN