Name uxONDm3yyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXpnKDm6pSxmm_1
Workunit 232848776
Created 4 Jun 2025, 11:14:36 UTC
Sent 4 Jun 2025, 13:03:38 UTC
Report deadline 12 Jun 2025, 13:03:38 UTC
Received 4 Jun 2025, 23:32:55 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10856910
Run time 6 min 6 sec
CPU time 9 hours 41 min 25 sec
Validate state Valid
Credit 284.22
Device peak FLOPS 59.92 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.79 GB
Peak swap size 37.48 GB
Peak disk usage 590.10 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:19:43 (3576461): wrapper (7.7.26015): starting
23:19:43 (3576461): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 23:19:43] Arguments: --nthreads 12
[2025-06-04 23:19:43] Threads: 12
[2025-06-04 23:19:43] Checking for CVMFS
[2025-06-04 23:19:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:19:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:20:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:20:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:20:58] 2.12.7.0 9267 8060 167536 146795 2 228 32839119 46080000 41958 130560 0 57946293 99.950 10485260 29737 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-04 23:20:58] CVMFS is ok
[2025-06-04 23:20:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:20:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:20:58] Further information can be found at the LHC@home message board.
[2025-06-04 23:20:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:20:58] Checking for apptainer binary...
[2025-06-04 23:20:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:20:58] Running /usr/bin/apptainer --version
[2025-06-04 23:20:58] apptainer version 1.4.1-1.el9
[2025-06-04 23:20:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:20:59] mff2103.farm.particle.cz
[2025-06-04 23:20:59] apptainer works
[2025-06-04 23:20:59] Set ATHENA_PROC_NUMBER=12
[2025-06-04 23:20:59] Set ATHENA_CORE_NUMBER=12
[2025-06-04 23:20:59] Starting ATLAS job with PandaID=6679111846
[2025-06-04 23:20:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:08:59]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:08:59] 2025-06-04 23:02:55,918 | INFO     | executing command: lscpu
[2025-06-05 01:08:59] 2025-06-04 23:02:56,186 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:08:59] 2025-06-04 23:02:58,789 | WARNING  | process 3693468 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 01:08:59] 2025-06-04 23:02:58,790 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6679111846/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:08:59] 2025-06-04 23:02:59,340 | INFO     | PID=3606732 has CPU usage=19.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 01:08:59] 2025-06-04 23:02:59,340 | INFO     | .. there are 104 such processes running
[2025-06-05 01:08:59] 2025-06-04 23:03:00,895 | INFO     | number of running child processes to parent process 3693468: 1
[2025-06-05 01:08:59] 2025-06-04 23:03:00,895 | INFO     | maximum number of monitored processes: 7
[2025-06-05 01:08:59] 2025-06-04 23:03:03,411 | INFO     | monitor loop #395: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:03,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:05,921 | INFO     | monitor loop #396: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:05,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:08,435 | INFO     | monitor loop #397: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:08,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:10,943 | INFO     | monitor loop #398: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:10,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:13,448 | INFO     | monitor loop #399: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:13,449 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:15,955 | INFO     | monitor loop #400: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:15,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:18,463 | INFO     | monitor loop #401: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:18,463 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:20,972 | INFO     | monitor loop #402: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:20,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:23,198 | INFO     | PID=3606732 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 01:08:59] 2025-06-04 23:03:23,198 | INFO     | .. there are 104 such processes running
[2025-06-05 01:08:59] 2025-06-04 23:03:23,489 | INFO     | monitor loop #403: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:23,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:24,199 | INFO     | 6057s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 01:08:59] 2025-06-04 23:03:25,993 | INFO     | monitor loop #404: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:25,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:28,500 | INFO     | monitor loop #405: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:28,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:31,008 | INFO     | monitor loop #406: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:31,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:33,515 | INFO     | monitor loop #407: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:33,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:36,033 | INFO     | monitor loop #408: job 0:6679111846 is in state 'finished'
[2025-06-05 01:08:59] 2025-06-04 23:03:36,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:59] 2025-06-04 23:03:36,321 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:08:59] 2025-06-04 23:03:36,322 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6679111846/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:08:59] 2025-06-04 23:03:36,322 | INFO     | extracted standard info from prmon json
[2025-06-05 01:08:59] 2025-06-04 23:03:36,323 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:08:59] 2025-06-04 23:03:36,323 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:08:59] 2025-06-04 23:03:36,323 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:08:59] 2025-06-04 23:03:36,323 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:08:59] 2025-06-04 23:03:36,325 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:08:59] 2025-06-04 23:03:36,325 | INFO     | sum of square deviations: 218570575.10112357
[2025-06-05 01:08:59] 2025-06-04 23:03:36,326 | INFO     | sum of deviations: 2033601851.3820214
[2025-06-05 01:08:59] 2025-06-04 23:03:36,326 | INFO     | mean x: 1749075310.1460674
[2025-06-05 01:08:59] 2025-06-04 23:03:36,336 | INFO     | mean y: 2675537.662921348
[2025-06-05 01:08:59] 2025-06-04 23:03:36,337 | INFO     | -- intersect: -16270890962.649323
[2025-06-05 01:08:59] 2025-06-04 23:03:36,337 | INFO     | intersect: -16270890962.649323
[2025-06-05 01:08:59] 2025-06-04 23:03:36,337 | INFO     | chi2: 0.17813442612006605
[2025-06-05 01:08:59] 2025-06-04 23:03:36,337 | INFO     | -- intersect: -16270890962.649323
[2025-06-05 01:08:59] 2025-06-04 23:03:36,337 | INFO     | current memory leak: 9.30 B/s (using 89 data points, chi2=0.18)
[2025-06-05 01:08:59] 2025-06-04 23:03:36,338 | INFO     | ..............................
[2025-06-05 01:08:59] 2025-06-04 23:03:36,338 | INFO     | . Timing measurements:
[2025-06-05 01:08:59] 2025-06-04 23:03:36,338 | INFO     | . get job = 0 s
[2025-06-05 01:08:59] 2025-06-04 23:03:36,338 | INFO     | . initial setup = 4 s
[2025-06-05 01:08:59] 2025-06-04 23:03:36,338 | INFO     | . payload setup = 56 s
[2025-06-05 01:08:59] 2025-06-04 23:03:36,338 | INFO     | . stage-in = 0 s
[2025-06-05 01:08:59] 2025-06-04 23:03:36,338 | INFO     | . payload execution = 5878 s
[2025-06-05 01:08:59] 2025-06-04 23:03:36,338 | INFO     | . stage-out = 2 s
[2025-06-05 01:08:59] 2025-06-04 23:03:36,338 | INFO     | . log creation = 0 s
[2025-06-05 01:08:59] 2025-06-04 23:03:36,339 | INFO     | ..............................
[2025-06-05 01:08:59] 2025-06-04 23:03:36,467 | INFO     | 
[2025-06-05 01:08:59] 2025-06-04 23:03:36,467 | INFO     | job summary report
[2025-06-05 01:08:59] 2025-06-04 23:03:36,467 | INFO     | --------------------------------------------------
[2025-06-05 01:08:59] 2025-06-04 23:03:36,467 | INFO     | PanDA job id: 6679111846
[2025-06-05 01:08:59] 2025-06-04 23:03:36,467 | INFO     | task id: 45006595
[2025-06-05 01:08:59] 2025-06-04 23:03:36,467 | INFO     | errors: (none)
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | pilot state: finished 
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | transexitcode: 0
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | exeerrorcode: 0
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | exeerrordiag: 
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | exitcode: 0
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | exitmsg: OK
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | cpuconsumptiontime: 34089 s
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | nevents: 400
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | neventsw: 0
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | pid: 3693468
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | pgrp: 3693468
[2025-06-05 01:08:59] 2025-06-04 23:03:36,468 | INFO     | corecount: 12
[2025-06-05 01:08:59] 2025-06-04 23:03:36,469 | INFO     | event service: False
[2025-06-05 01:08:59] 2025-06-04 23:03:36,469 | INFO     | sizes: {0: 2397122, 1: 2397321, 12: 2397321, 22: 2397349, 33: 2397377, 38: 2397639, 44: 2397795, 5939: 2424323, 5940: 2424322, 5942: 2433321, 5943: 2433377, 5985: 
[2025-06-05 01:08:59] 2025-06-04 23:03:36,469 | INFO     | --------------------------------------------------
[2025-06-05 01:08:59] 2025-06-04 23:03:36,469 | INFO     | 
[2025-06-05 01:08:59] 2025-06-04 23:03:36,469 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-06-05 01:08:59] 2025-06-04 23:03:36,666 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,666 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,666 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,666 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,666 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,666 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:08:59] 2025-06-04 23:03:36,667 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,668 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:08:59] 2025-06-04 23:03:36,668 | INFO     | job 6679111846 has completed (purged errors)
[2025-06-05 01:08:59] 2025-06-04 23:03:36,668 | INFO     | overall cleanup function is called
[2025-06-05 01:08:59] 2025-06-04 23:03:37,684 | INFO     | --- collectZombieJob: --- 10, [3693468]
[2025-06-05 01:08:59] 2025-06-04 23:03:37,685 | INFO     | zombie collector waiting for pid 3693468
[2025-06-05 01:08:59] 2025-06-04 23:03:37,685 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:08:59] 2025-06-04 23:03:37,685 | INFO     | collected zombie processes
[2025-06-05 01:08:59] 2025-06-04 23:03:37,685 | INFO     | will attempt to kill all subprocesses of pid=3693468
[2025-06-05 01:08:59] 2025-06-04 23:03:39,108 | INFO     | process IDs to be killed: [3693468] (in reverse order)
[2025-06-05 01:08:59] 2025-06-04 23:03:40,002 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:08:59] 2025-06-04 23:03:40,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:08:59] 2025-06-04 23:03:40,048 | INFO     | did not find any defunct processes belonging to 3693468
[2025-06-05 01:08:59] 2025-06-04 23:03:40,117 | INFO     | did not find any defunct processes belonging to 3693468
[2025-06-05 01:08:59] 2025-06-04 23:03:40,118 | INFO     | ready for new job
[2025-06-05 01:08:59] 2025-06-04 23:03:40,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:08:59] 2025-06-04 23:03:40,124 | INFO     | **************************************
[2025-06-05 01:08:59] 2025-06-04 23:03:40,124 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:08:59] 2025-06-04 23:03:40,124 | INFO     | **************************************
[2025-06-05 01:08:59] 2025-06-04 23:03:40,124 | INFO     | 
[2025-06-05 01:08:59] 2025-06-04 23:03:40,136 | INFO     | architecture information:
[2025-06-05 01:08:59] 2025-06-04 23:03:40,144 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:08:59] 2025-06-04 23:03:40,255 | INFO     | cat /etc/os-release:
[2025-06-05 01:08:59] NAME="CentOS Linux"
[2025-06-05 01:08:59] VERSION="7 (Core)"
[2025-06-05 01:08:59] ID="centos"
[2025-06-05 01:08:59] ID_LIKE="rhel fedora"
[2025-06-05 01:08:59] VERSION_ID="7"
[2025-06-05 01:08:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:08:59] ANSI_COLOR="0;31"
[2025-06-05 01:08:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:08:59] HOME_URL="https://www.centos.org/"
[2025-06-05 01:08:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:08:59] 
[2025-06-05 01:08:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:08:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:08:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:08:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:08:59] 
[2025-06-05 01:08:59] 2025-06-04 23:03:40,255 | INFO     | **************************************
[2025-06-05 01:08:59] 2025-06-04 23:03:40,758 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-06-05 01:08:59] 2025-06-04 23:03:40,902 | INFO     | sufficient remaining disk space (1679018688512 B)
[2025-06-05 01:08:59] 2025-06-04 23:03:40,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:08:59] 2025-06-04 23:03:40,902 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:08:59] 2025-06-04 23:03:40,902 | INFO     | update_server=False
[2025-06-05 01:08:59] 2025-06-04 23:03:40,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:08:59] 2025-06-04 23:03:41,056 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 01:08:59] 2025-06-04 23:03:41,057 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 01:08:59] 2025-06-04 23:03:41,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:08:59] 2025-06-04 23:03:41,057 | INFO     | will abort loop
[2025-06-05 01:08:59] 2025-06-04 23:03:41,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:08:59] 2025-06-04 23:03:41,280 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:08:59] 2025-06-04 23:03:41,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:08:59] 2025-06-04 23:03:41,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:08:59] 2025-06-04 23:03:41,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:08:59] 2025-06-04 23:03:41,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:08:59] 2025-06-04 23:03:41,548 | INFO     | all payload control threads have been joined
[2025-06-05 01:08:59] 2025-06-04 23:03:41,651 | INFO     | all data control threads have been joined
[2025-06-05 01:08:59] 2025-06-04 23:03:41,908 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:42,062 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:42,142 | INFO     | all job control threads have been joined
[2025-06-05 01:08:59] 2025-06-04 23:03:42,467 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:42,468 | INFO     | [job] validate thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:42,486 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:42,498 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:42,554 | INFO     | [payload] control thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:42,657 | INFO     | [data] control thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:42,666 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:43,005 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:43,076 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:43,148 | INFO     | [job] control thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:43,263 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:43,316 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:43,398 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:45,143 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:08:59] 2025-06-04 23:03:46,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950714754880)>', '<ExcThread(monitor, started 139950049695488)>']
[2025-06-05 01:08:59] 2025-06-04 23:03:46,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:08:59] 2025-06-04 23:03:46,316 | INFO     | [monitor] control thread has ended
[2025-06-05 01:08:59] 2025-06-04 23:03:51,094 | INFO     | all workflow threads have been joined
[2025-06-05 01:08:59] 2025-06-04 23:03:51,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:08:59] 2025-06-04 23:03:51,095 | INFO     | traces error code: 0
[2025-06-05 01:08:59] 2025-06-04 23:03:51,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:08:59] 2025-06-04 23:03:51,567 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:08:59] 2025-06-04 23:03:51,596 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:08:59] 2025-06-04 23:03:51,646 [wrapper] pilotpid: 3606732
[2025-06-05 01:08:59] 2025-06-04 23:03:51,692 [wrapper] Pilot exit status: 0
[2025-06-05 01:08:59] 2025-06-04 23:03:51,883 [wrapper] pandaids: 6679111846
[2025-06-05 01:08:59] 2025-06-04 23:03:52,298 [wrapper] cleanup supervisor_pilot  436792 3606733
[2025-06-05 01:08:59] 2025-06-04 23:03:52,323 [wrapper] Test setup, not cleaning
[2025-06-05 01:08:59] 2025-06-04 23:03:52,366 [wrapper] apfmon messages muted
[2025-06-05 01:08:59] 2025-06-04 23:03:52,415 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:08:59] 2025-06-04 23:03:52,465 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:08:59]  *** Error codes and diagnostics ***
[2025-06-05 01:08:59]     "exeErrorCode": 0,
[2025-06-05 01:08:59]     "exeErrorDiag": "",
[2025-06-05 01:08:59]     "pilotErrorCode": 0,
[2025-06-05 01:08:59]     "pilotErrorDiag": "",
[2025-06-05 01:08:59]  *** Listing of results directory ***
[2025-06-05 01:08:59] total 389832
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:48 queuedata.json
[2025-06-05 01:08:59] -rwx------ 1 boinc boinc     37140 Jun  4 10:48 runpilot2-wrapper.sh
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc       100 Jun  4 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:08:59] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 23:19 run_atlas
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc       105 Jun  4 23:19 job.xml
[2025-06-05 01:08:59] -rw-r--r-- 2 boinc boinc 215941439 Jun  4 23:19 EVNT.45006593._001047.pool.root.1
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc      6664 Jun  4 23:19 init_data.xml
[2025-06-05 01:08:59] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:19 start_atlas.sh
[2025-06-05 01:08:59] drwxrwx--x 2 boinc boinc      4096 Jun  4 23:19 shared
[2025-06-05 01:08:59] -rw-r--r-- 2 boinc boinc    508888 Jun  4 23:19 input.tar.gz
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc         0 Jun  4 23:19 boinc_lockfile
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc      2525 Jun  4 23:20 pandaJob.out
[2025-06-05 01:08:59] -rw------- 1 boinc boinc    987032 Jun  4 23:22 agis_schedconf.cvmfs.json
[2025-06-05 01:08:59] -rw------- 1 boinc boinc   1598969 Jun  4 23:22 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:08:59] drwx------ 4 boinc boinc      4096 Jun  4 23:22 pilot3
[2025-06-05 01:08:59] -rw------- 1 boinc boinc 177610893 Jun  5 01:01 HITS.45006595._055863.pool.root.1
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc       529 Jun  5 01:01 boinc_task_state.xml
[2025-06-05 01:08:59] -rw------- 1 boinc boinc      1022 Jun  5 01:02 memory_monitor_summary.json
[2025-06-05 01:08:59] -rw------- 1 boinc boinc    376856 Jun  5 01:02 log.45006595._055863.job.log.tgz.1
[2025-06-05 01:08:59] -rw------- 1 boinc boinc        95 Jun  5 01:03 pilot_heartbeat.json
[2025-06-05 01:08:59] -rw------- 1 boinc boinc      7695 Jun  5 01:03 heartbeat.json
[2025-06-05 01:08:59] -rw------- 1 boinc boinc      4542 Jun  5 01:03 pilotlog.txt
[2025-06-05 01:08:59] -rw------- 1 boinc boinc    523585 Jun  5 01:03 log.45006595._055863.job.log.1
[2025-06-05 01:08:59] -rw------- 1 boinc boinc       357 Jun  5 01:03 output.list
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:03 runtime_log
[2025-06-05 01:08:59] -rw------- 1 boinc boinc    921600 Jun  5 01:03 result.tar.gz
[2025-06-05 01:08:59] -rw------- 1 boinc boinc       663 Jun  5 01:03 uxONDm3yyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXpnKDm6pSxmm.diag
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc      8720 Jun  5 01:03 runtime_log.err
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc        26 Jun  5 01:08 wrapper_checkpoint.txt
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:08 boinc_mmap_file
[2025-06-05 01:08:59] -rw-r--r-- 1 boinc boinc     22568 Jun  5 01:08 stderr.txt
[2025-06-05 01:08:59] HITS file was successfully produced:
[2025-06-05 01:08:59] -rw------- 1 boinc boinc 177610893 Jun  5 01:01 shared/HITS.pool.root.1
[2025-06-05 01:08:59]  *** Contents of shared directory: ***
[2025-06-05 01:08:59] total 385756
[2025-06-05 01:08:59] -rw-r--r-- 2 boinc boinc 215941439 Jun  4 23:19 ATLAS.root_0
[2025-06-05 01:08:59] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:19 start_atlas.sh
[2025-06-05 01:08:59] -rw-r--r-- 2 boinc boinc    508888 Jun  4 23:19 input.tar.gz
[2025-06-05 01:08:59] -rw------- 1 boinc boinc 177610893 Jun  5 01:01 HITS.pool.root.1
[2025-06-05 01:08:59] -rw------- 1 boinc boinc    921600 Jun  5 01:03 result.tar.gz
01:09:01 (3576461): run_atlas exited; CPU time 34475.950283
01:09:01 (3576461): called boinc_finish(0)

</stderr_txt>
]]>


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