Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:40:41 (11877): wrapper (7.7.26015): starting
22:40:41 (11877): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:40:41] Arguments: --nthreads 8
[2025-06-04 22:40:41] Threads: 8
[2025-06-04 22:40:41] Checking for CVMFS
[2025-06-04 22:40:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:40:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:40:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:40:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:40:43] 2.11.2.0 21130 33689 91480 146793 0 201 17044175 25165824 4405 130560 0 17212373 99.788 19783300 2119 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 22:40:43] CVMFS is ok
[2025-06-04 22:40:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:40:43] Checking for apptainer binary...
[2025-06-04 22:40:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:40:43] Running /usr/bin/apptainer --version
[2025-06-04 22:40:43] apptainer version 1.3.2-1.el7
[2025-06-04 22:40:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:40:56] cg-vwn411.simple-grid.lan
[2025-06-04 22:40:56] apptainer works
[2025-06-04 22:40:56] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:40:56] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:40:56] Starting ATLAS job with PandaID=6679338008
[2025-06-04 22:40:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:40:14]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:40:15] 2025-06-05 00:40:54,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:40:15] 2025-06-05 00:40:57,149 | INFO     | monitor loop #1005: job 0:6679338008 is in state 'finished'
[2025-06-05 04:40:15] 2025-06-05 00:40:57,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:40:15] 2025-06-05 00:40:57,728 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 04:40:15] 2025-06-05 00:40:57,728 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6679338008/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:40:15] 2025-06-05 00:40:57,729 | INFO     | extracted standard info from prmon json
[2025-06-05 04:40:15] 2025-06-05 00:40:57,729 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:40:15] 2025-06-05 00:40:57,729 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:40:15] 2025-06-05 00:40:57,730 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:40:15] 2025-06-05 00:40:57,730 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:40:15] 2025-06-05 00:40:57,735 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:40:15] 2025-06-05 00:40:57,736 | INFO     | sum of square deviations: 3922276332.0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,738 | INFO     | sum of deviations: 13050626517.00001
[2025-06-05 04:40:15] 2025-06-05 00:40:57,738 | INFO     | mean x: 1749076845.0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,738 | INFO     | mean y: 2494260.600858369
[2025-06-05 04:40:15] 2025-06-05 00:40:57,738 | INFO     | -- intersect: -5817225392.345744
[2025-06-05 04:40:15] 2025-06-05 00:40:57,738 | INFO     | intersect: -5817225392.345744
[2025-06-05 04:40:15] 2025-06-05 00:40:57,739 | INFO     | chi2: 1.7794845261165344
[2025-06-05 04:40:15] 2025-06-05 00:40:57,739 | INFO     | sum of square deviations: 3675146117.0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,741 | INFO     | sum of deviations: 12535556394.499994
[2025-06-05 04:40:15] 2025-06-05 00:40:57,741 | INFO     | mean x: 1749076692.5
[2025-06-05 04:40:15] 2025-06-05 00:40:57,741 | INFO     | mean y: 2493944.3114035088
[2025-06-05 04:40:15] 2025-06-05 00:40:57,741 | INFO     | -- intersect: -5963431986.012437
[2025-06-05 04:40:15] 2025-06-05 00:40:57,742 | INFO     | intersect: -5963431986.012437
[2025-06-05 04:40:15] 2025-06-05 00:40:57,742 | INFO     | chi2: 1.7798954135980898
[2025-06-05 04:40:15] 2025-06-05 00:40:57,742 | INFO     | current chi2=1.7798954135980898 (change=-0.023090253133702693 %)
[2025-06-05 04:40:15] 2025-06-05 00:40:57,742 | INFO     | right removable region: 227
[2025-06-05 04:40:15] 2025-06-05 00:40:57,743 | INFO     | sum of square deviations: 3675146117.0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,744 | INFO     | sum of deviations: -26364638895.000004
[2025-06-05 04:40:15] 2025-06-05 00:40:57,745 | INFO     | mean x: 1749076997.5
[2025-06-05 04:40:15] 2025-06-05 00:40:57,745 | INFO     | mean y: 2518376.9298245613
[2025-06-05 04:40:15] 2025-06-05 00:40:57,745 | INFO     | -- intersect: 12549987775.583485
[2025-06-05 04:40:15] 2025-06-05 00:40:57,745 | INFO     | intersect: 12549987775.583485
[2025-06-05 04:40:15] 2025-06-05 00:40:57,745 | INFO     | chi2: 0.17250762788202703
[2025-06-05 04:40:15] 2025-06-05 00:40:57,745 | INFO     | current chi2=0.17250762788202703 (change=90.30575285425495 %)
[2025-06-05 04:40:15] 2025-06-05 00:40:57,746 | INFO     | sum of square deviations: 3438620752.0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,748 | INFO     | sum of deviations: -25906088963.000015
[2025-06-05 04:40:15] 2025-06-05 00:40:57,748 | INFO     | mean x: 1749077150.0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,748 | INFO     | mean y: 2518048.390134529
[2025-06-05 04:40:15] 2025-06-05 00:40:57,748 | INFO     | -- intersect: 13179821251.919025
[2025-06-05 04:40:15] 2025-06-05 00:40:57,748 | INFO     | intersect: 13179821251.919025
[2025-06-05 04:40:15] 2025-06-05 00:40:57,749 | INFO     | chi2: 0.15747293989071914
[2025-06-05 04:40:15] 2025-06-05 00:40:57,749 | INFO     | current chi2=0.15747293989071914 (change=8.715375763899365 %)
[2025-06-05 04:40:15] 2025-06-05 00:40:57,749 | INFO     | left removable region: 20
[2025-06-05 04:40:15] 2025-06-05 00:40:57,749 | INFO     | sum of square deviations: 2750295288.0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,751 | INFO     | sum of deviations: -10916419150.999998
[2025-06-05 04:40:15] 2025-06-05 00:40:57,751 | INFO     | mean x: 1749077272.0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,751 | INFO     | mean y: 2507669.995169082
[2025-06-05 04:40:15] 2025-06-05 00:40:57,751 | INFO     | -- intersect: 6944911531.845378
[2025-06-05 04:40:15] 2025-06-05 00:40:57,751 | INFO     | intersect: 6944911531.845378
[2025-06-05 04:40:15] 2025-06-05 00:40:57,752 | INFO     | chi2: 0.10427570902084626
[2025-06-05 04:40:15] 2025-06-05 00:40:57,752 | INFO     | -- intersect: 6944911531.845378
[2025-06-05 04:40:15] 2025-06-05 00:40:57,752 | INFO     | current memory leak: -3.97 B/s (using 207 data points, chi2=0.10)
[2025-06-05 04:40:15] 2025-06-05 00:40:57,753 | INFO     | ..............................
[2025-06-05 04:40:15] 2025-06-05 00:40:57,753 | INFO     | . Timing measurements:
[2025-06-05 04:40:15] 2025-06-05 00:40:57,753 | INFO     | . get job = 0 s
[2025-06-05 04:40:15] 2025-06-05 00:40:57,753 | INFO     | . initial setup = 2 s
[2025-06-05 04:40:15] 2025-06-05 00:40:57,753 | INFO     | . payload setup = 20 s
[2025-06-05 04:40:15] 2025-06-05 00:40:57,753 | INFO     | . stage-in = 0 s
[2025-06-05 04:40:15] 2025-06-05 00:40:57,753 | INFO     | . payload execution = 14248 s
[2025-06-05 04:40:15] 2025-06-05 00:40:57,753 | INFO     | . stage-out = 3 s
[2025-06-05 04:40:15] 2025-06-05 00:40:57,753 | INFO     | . log creation = 1 s
[2025-06-05 04:40:15] 2025-06-05 00:40:57,753 | INFO     | ..............................
[2025-06-05 04:40:15] 2025-06-05 00:40:57,881 | INFO     | 
[2025-06-05 04:40:15] 2025-06-05 00:40:57,881 | INFO     | job summary report
[2025-06-05 04:40:15] 2025-06-05 00:40:57,882 | INFO     | --------------------------------------------------
[2025-06-05 04:40:15] 2025-06-05 00:40:57,882 | INFO     | PanDA job id: 6679338008
[2025-06-05 04:40:15] 2025-06-05 00:40:57,882 | INFO     | task id: 45006595
[2025-06-05 04:40:15] 2025-06-05 00:40:57,882 | INFO     | errors: (none)
[2025-06-05 04:40:15] 2025-06-05 00:40:57,882 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:40:15] 2025-06-05 00:40:57,882 | INFO     | pilot state: finished 
[2025-06-05 04:40:15] 2025-06-05 00:40:57,882 | INFO     | transexitcode: 0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,882 | INFO     | exeerrorcode: 0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,883 | INFO     | exeerrordiag: 
[2025-06-05 04:40:15] 2025-06-05 00:40:57,883 | INFO     | exitcode: 0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,883 | INFO     | exitmsg: OK
[2025-06-05 04:40:15] 2025-06-05 00:40:57,883 | INFO     | cpuconsumptiontime: 51958 s
[2025-06-05 04:40:15] 2025-06-05 00:40:57,883 | INFO     | nevents: 400
[2025-06-05 04:40:15] 2025-06-05 00:40:57,883 | INFO     | neventsw: 0
[2025-06-05 04:40:15] 2025-06-05 00:40:57,883 | INFO     | pid: 25926
[2025-06-05 04:40:15] 2025-06-05 00:40:57,883 | INFO     | pgrp: 25926
[2025-06-05 04:40:15] 2025-06-05 00:40:57,883 | INFO     | corecount: 8
[2025-06-05 04:40:15] 2025-06-05 00:40:57,884 | INFO     | event service: False
[2025-06-05 04:40:15] 2025-06-05 00:40:57,884 | INFO     | sizes: {0: 2396464, 1: 2397320, 2: 2397320, 10: 2397554, 12: 2397582, 14273: 2427525, 14277: 2436466, 14279: 2436522, 14354: 2436692}
[2025-06-05 04:40:15] 2025-06-05 00:40:57,884 | INFO     | --------------------------------------------------
[2025-06-05 04:40:15] 2025-06-05 00:40:57,884 | INFO     | 
[2025-06-05 04:40:15] 2025-06-05 00:40:57,884 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-05 04:40:15] 2025-06-05 00:40:58,413 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:40:15] 2025-06-05 00:40:58,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:40:15] 2025-06-05 00:40:58,415 | INFO     | job 6679338008 has completed (purged errors)
[2025-06-05 04:40:15] 2025-06-05 00:40:58,416 | INFO     | overall cleanup function is called
[2025-06-05 04:40:15] 2025-06-05 00:40:59,425 | INFO     | --- collectZombieJob: --- 10, [25926]
[2025-06-05 04:40:15] 2025-06-05 00:40:59,426 | INFO     | zombie collector waiting for pid 25926
[2025-06-05 04:40:15] 2025-06-05 00:40:59,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:40:15] 2025-06-05 00:40:59,426 | INFO     | collected zombie processes
[2025-06-05 04:40:15] 2025-06-05 00:40:59,426 | INFO     | will attempt to kill all subprocesses of pid=25926
[2025-06-05 04:40:15] 2025-06-05 00:40:59,549 | INFO     | process IDs to be killed: [25926] (in reverse order)
[2025-06-05 04:40:15] 2025-06-05 00:41:00,088 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:40:15] 2025-06-05 00:41:00,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:40:15] 2025-06-05 00:41:00,092 | INFO     | did not find any defunct processes belonging to 25926
[2025-06-05 04:40:15] 2025-06-05 00:41:00,095 | INFO     | did not find any defunct processes belonging to 25926
[2025-06-05 04:40:15] 2025-06-05 00:41:00,095 | INFO     | ready for new job
[2025-06-05 04:40:15] 2025-06-05 00:41:00,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:40:15] 2025-06-05 00:41:00,100 | INFO     | **************************************
[2025-06-05 04:40:15] 2025-06-05 00:41:00,100 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:40:15] 2025-06-05 00:41:00,101 | INFO     | **************************************
[2025-06-05 04:40:15] 2025-06-05 00:41:00,101 | INFO     | 
[2025-06-05 04:40:15] 2025-06-05 00:41:00,101 | INFO     | pilot is running in a VM
[2025-06-05 04:40:15] 2025-06-05 00:41:00,101 | INFO     | architecture information:
[2025-06-05 04:40:15] 2025-06-05 00:41:00,111 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:40:15] 2025-06-05 00:41:00,283 | INFO     | cat /etc/os-release:
[2025-06-05 04:40:15] NAME="CentOS Linux"
[2025-06-05 04:40:15] VERSION="7 (Core)"
[2025-06-05 04:40:15] ID="centos"
[2025-06-05 04:40:15] ID_LIKE="rhel fedora"
[2025-06-05 04:40:15] VERSION_ID="7"
[2025-06-05 04:40:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:40:15] ANSI_COLOR="0;31"
[2025-06-05 04:40:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:40:15] HOME_URL="https://www.centos.org/"
[2025-06-05 04:40:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:40:15] 
[2025-06-05 04:40:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:40:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:40:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:40:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:40:15] 
[2025-06-05 04:40:15] 2025-06-05 00:41:00,283 | INFO     | **************************************
[2025-06-05 04:40:15] 2025-06-05 00:41:00,794 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-05 04:40:15] 2025-06-05 00:41:00,877 | INFO     | PID=17582 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 04:40:15] 2025-06-05 00:41:00,878 | INFO     | .. there are 9 such processes running
[2025-06-05 04:40:15] 2025-06-05 00:41:00,955 | INFO     | sufficient remaining disk space (496497590272 B)
[2025-06-05 04:40:15] 2025-06-05 00:41:00,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:40:15] 2025-06-05 00:41:00,956 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:40:15] 2025-06-05 00:41:00,956 | INFO     | update_server=False
[2025-06-05 04:40:15] 2025-06-05 00:41:00,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:40:15] 2025-06-05 00:41:00,956 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 04:40:15] 2025-06-05 00:41:00,957 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:40:15] 2025-06-05 00:41:00,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:40:15] 2025-06-05 00:41:00,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:40:15] 2025-06-05 00:41:00,957 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:40:15] 2025-06-05 00:41:00,958 | INFO     | aborting loop
[2025-06-05 04:40:15] 2025-06-05 00:41:00,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:40:15] 2025-06-05 00:41:01,027 | INFO     | all data control threads have been joined
[2025-06-05 04:40:15] 2025-06-05 00:41:01,083 | INFO     | all payload control threads have been joined
[2025-06-05 04:40:15] 2025-06-05 00:41:01,212 | INFO     | all job control threads have been joined
[2025-06-05 04:40:15] 2025-06-05 00:41:01,963 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:01,965 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:01,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:40:15] 2025-06-05 00:41:02,032 | INFO     | [data] control thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:02,053 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:02,089 | INFO     | [payload] control thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:02,093 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:02,218 | INFO     | [job] control thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:02,241 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:02,617 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:02,852 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:02,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:40:15] 2025-06-05 00:41:02,988 | INFO     | [job] validate thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:02,998 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:03,901 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:03,976 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:04,969 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:11,176 | INFO     | job.realtimelogging is not enabled
[2025-06-05 04:40:15] 2025-06-05 00:41:12,182 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:40:15] 2025-06-05 00:41:13,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139917313599296)>', '<ExcThread(monitor, started 139916730160896)>']
[2025-06-05 04:40:15] 2025-06-05 00:41:14,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:40:15] 2025-06-05 00:41:14,035 | INFO     | [monitor] control thread has ended
[2025-06-05 04:40:15] 2025-06-05 00:41:18,430 | INFO     | all workflow threads have been joined
[2025-06-05 04:40:15] 2025-06-05 00:41:18,431 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:40:15] 2025-06-05 00:41:18,431 | INFO     | traces error code: 0
[2025-06-05 04:40:15] 2025-06-05 00:41:18,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:40:15] 2025-06-05 00:41:18,656 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:40:15] 2025-06-05 00:41:18,662 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:40:15] 2025-06-05 00:41:18,665 [wrapper] pilotpid: 17582
[2025-06-05 04:40:15] 2025-06-05 00:41:18,739 [wrapper] Pilot exit status: 0
[2025-06-05 04:40:15] 2025-06-05 00:41:19,185 [wrapper] pandaids: 6679338008
[2025-06-05 04:40:15] 2025-06-05 00:41:19,875 [wrapper] cleanup supervisor_pilot 16877 17583
[2025-06-05 04:40:15] 2025-06-05 00:41:19,965 [wrapper] Test setup, not cleaning
[2025-06-05 04:40:15] 2025-06-05 00:41:20,080 [wrapper] apfmon messages muted
[2025-06-05 04:40:15] 2025-06-05 00:41:20,143 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:40:15] 2025-06-05 00:41:20,150 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:40:15]  *** Error codes and diagnostics ***
[2025-06-05 04:40:15]     "exeErrorCode": 0,
[2025-06-05 04:40:15]     "exeErrorDiag": "",
[2025-06-05 04:40:15]     "pilotErrorCode": 0,
[2025-06-05 04:40:15]     "pilotErrorDiag": "",
[2025-06-05 04:40:15]  *** Listing of results directory ***
[2025-06-05 04:40:15] total 402816
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 04:40:15] -rwx------. 1 boinc boinc     37140 Jun  4 10:58 runpilot2-wrapper.sh
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc      5111 Jun  4 10:58 queuedata.json
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc       100 Jun  4 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:40:15] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 22:40 run_atlas
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc       105 Jun  4 22:40 job.xml
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc      6392 Jun  4 22:40 init_data.xml
[2025-06-05 04:40:15] -rw-r--r--. 2 boinc boinc 217945981 Jun  4 22:40 EVNT.45006593._001795.pool.root.1
[2025-06-05 04:40:15] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:40 start_atlas.sh
[2025-06-05 04:40:15] drwxrwx--x. 2 boinc boinc        68 Jun  4 22:40 shared
[2025-06-05 04:40:15] -rw-r--r--. 2 boinc boinc    508876 Jun  4 22:40 input.tar.gz
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc         0 Jun  4 22:40 boinc_lockfile
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc      2525 Jun  4 22:40 pandaJob.out
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc    987032 Jun  4 22:41 agis_schedconf.cvmfs.json
[2025-06-05 04:40:15] drwx------. 4 boinc boinc      4096 Jun  4 22:41 pilot3
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc 187423862 Jun  5 02:38 HITS.45006595._056179.pool.root.1
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc       530 Jun  5 02:38 boinc_task_state.xml
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc      1018 Jun  5 02:39 memory_monitor_summary.json
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc   1598969 Jun  5 02:39 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc    405151 Jun  5 02:39 log.45006595._056179.job.log.tgz.1
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc        95 Jun  5 02:40 pilot_heartbeat.json
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc      7690 Jun  5 02:40 heartbeat.json
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc      5003 Jun  5 02:41 pilotlog.txt
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc   1242920 Jun  5 02:41 log.45006595._056179.job.log.1
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc       357 Jun  5 02:41 output.list
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc       620 Jun  5 02:41 runtime_log
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc   1669120 Jun  5 02:41 result.tar.gz
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc       656 Jun  5 02:41 VVCNDm17yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmitnKDmco1b7n.diag
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc      8659 Jun  5 02:41 runtime_log.err
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc      8192 Jun  5 04:40 boinc_mmap_file
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc        28 Jun  5 04:40 wrapper_checkpoint.txt
[2025-06-05 04:40:15] -rw-r--r--. 1 boinc boinc     20825 Jun  5 04:40 stderr.txt
[2025-06-05 04:40:15] HITS file was successfully produced:
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc 187423862 Jun  5 02:38 shared/HITS.pool.root.1
[2025-06-05 04:40:15]  *** Contents of shared directory: ***
[2025-06-05 04:40:15] total 398020
[2025-06-05 04:40:15] -rw-r--r--. 2 boinc boinc 217945981 Jun  4 22:40 ATLAS.root_0
[2025-06-05 04:40:15] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:40 start_atlas.sh
[2025-06-05 04:40:15] -rw-r--r--. 2 boinc boinc    508876 Jun  4 22:40 input.tar.gz
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc 187423862 Jun  5 02:38 HITS.pool.root.1
[2025-06-05 04:40:15] -rw-------. 1 boinc boinc   1669120 Jun  5 02:41 result.tar.gz
04:40:17 (11877): run_atlas exited; CPU time 52141.600916
04:40:17 (11877): called boinc_finish(0)

</stderr_txt>
]]>

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