Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:01:24 (7273): wrapper (7.7.26015): starting
09:01:24 (7273): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:01:24] Arguments: --nthreads 8
[2025-06-04 09:01:24] Threads: 8
[2025-06-04 09:01:24] Checking for CVMFS
[2025-06-04 09:01:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:01:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:01:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:01:25] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/patatrack.cern.ch: Transport endpoint is not connected
[2025-06-04 09:01:25] 
[2025-06-04 09:01:25] CVMFS is ok
[2025-06-04 09:01:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:01:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:01:25] Further information can be found at the LHC@home message board.
[2025-06-04 09:01:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:01:25] Checking for apptainer binary...
[2025-06-04 09:01:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:01:25] Running /usr/bin/apptainer --version
[2025-06-04 09:01:25] apptainer version 1.3.2-1.el7
[2025-06-04 09:01:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:01:26] c-211-13.aglt2.org
[2025-06-04 09:01:26] apptainer works
[2025-06-04 09:01:26] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:01:26] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:01:26] Starting ATLAS job with PandaID=6679447614
[2025-06-04 09:01:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:29:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:29:36] 2025-06-04 15:29:15,799 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:29:36] 2025-06-04 15:29:15,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:29:36] 2025-06-04 15:29:15,802 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:29:36] 2025-06-04 15:29:15,802 | INFO     | sum of square deviations: 925855987.9930569
[2025-06-04 11:29:36] 2025-06-04 15:29:15,803 | INFO     | sum of deviations: 8806158942.618065
[2025-06-04 11:29:36] 2025-06-04 15:29:15,803 | INFO     | mean x: 1749046549.5069444
[2025-06-04 11:29:36] 2025-06-04 15:29:15,803 | INFO     | mean y: 2437524.8819444445
[2025-06-04 11:29:36] 2025-06-04 15:29:15,804 | INFO     | -- intersect: -16633391494.68622
[2025-06-04 11:29:36] 2025-06-04 15:29:15,804 | INFO     | intersect: -16633391494.68622
[2025-06-04 11:29:36] 2025-06-04 15:29:15,804 | INFO     | chi2: 2.3796465747797932
[2025-06-04 11:29:36] 2025-06-04 15:29:15,804 | INFO     | sum of square deviations: 832719662.9928035
[2025-06-04 11:29:36] 2025-06-04 15:29:15,805 | INFO     | sum of deviations: 17836930671.776974
[2025-06-04 11:29:36] 2025-06-04 15:29:15,805 | INFO     | mean x: 1749046397.0071943
[2025-06-04 11:29:36] 2025-06-04 15:29:15,805 | INFO     | mean y: 2451879.2230215827
[2025-06-04 11:29:36] 2025-06-04 15:29:15,805 | INFO     | -- intersect: -37462280505.03947
[2025-06-04 11:29:36] 2025-06-04 15:29:15,806 | INFO     | intersect: -37462280505.03947
[2025-06-04 11:29:36] 2025-06-04 15:29:15,806 | INFO     | chi2: 1.610416933349525
[2025-06-04 11:29:36] 2025-06-04 15:29:15,806 | INFO     | current chi2=1.610416933349525 (change=32.325373422372635 %)
[2025-06-04 11:29:36] 2025-06-04 15:29:15,806 | INFO     | sum of square deviations: 746048575.4925351
[2025-06-04 11:29:36] 2025-06-04 15:29:15,807 | INFO     | sum of deviations: 17129198419.08955
[2025-06-04 11:29:36] 2025-06-04 15:29:15,807 | INFO     | mean x: 1749046244.5074627
[2025-06-04 11:29:36] 2025-06-04 15:29:15,807 | INFO     | mean y: 2450633.4104477614
[2025-06-04 11:29:36] 2025-06-04 15:29:15,808 | INFO     | -- intersect: -40155470915.53502
[2025-06-04 11:29:36] 2025-06-04 15:29:15,808 | INFO     | intersect: -40155470915.53502
[2025-06-04 11:29:36] 2025-06-04 15:29:15,808 | INFO     | chi2: 1.6127722635858328
[2025-06-04 11:29:36] 2025-06-04 15:29:15,808 | INFO     | current chi2=1.6127722635858328 (change=-0.14625592835818368 %)
[2025-06-04 11:29:36] 2025-06-04 15:29:15,808 | INFO     | right removable region: 133
[2025-06-04 11:29:36] 2025-06-04 15:29:15,809 | INFO     | sum of square deviations: 832719052.9928035
[2025-06-04 11:29:36] 2025-06-04 15:29:15,809 | INFO     | sum of deviations: -13437478776.705034
[2025-06-04 11:29:36] 2025-06-04 15:29:15,809 | INFO     | mean x: 1749046702.0071943
[2025-06-04 11:29:36] 2025-06-04 15:29:15,810 | INFO     | mean y: 2473403.705035971
[2025-06-04 11:29:36] 2025-06-04 15:29:15,810 | INFO     | -- intersect: 28226611969.069077
[2025-06-04 11:29:36] 2025-06-04 15:29:15,810 | INFO     | intersect: 28226611969.069077
[2025-06-04 11:29:36] 2025-06-04 15:29:15,810 | INFO     | chi2: 0.8734715137721318
[2025-06-04 11:29:36] 2025-06-04 15:29:15,810 | INFO     | current chi2=0.8734715137721318 (change=63.294065470501195 %)
[2025-06-04 11:29:36] 2025-06-04 15:29:15,811 | INFO     | sum of square deviations: 746047355.4925351
[2025-06-04 11:29:36] 2025-06-04 15:29:15,811 | INFO     | sum of deviations: -12502214851.283587
[2025-06-04 11:29:36] 2025-06-04 15:29:15,811 | INFO     | mean x: 1749046854.5074627
[2025-06-04 11:29:36] 2025-06-04 15:29:15,812 | INFO     | mean y: 2471665.2835820895
[2025-06-04 11:29:36] 2025-06-04 15:29:15,812 | INFO     | -- intersect: 29312889293.635918
[2025-06-04 11:29:36] 2025-06-04 15:29:15,812 | INFO     | intersect: 29312889293.635918
[2025-06-04 11:29:36] 2025-06-04 15:29:15,812 | INFO     | chi2: 0.85913898315406
[2025-06-04 11:29:36] 2025-06-04 15:29:15,812 | INFO     | current chi2=0.85913898315406 (change=1.6408698385796294 %)
[2025-06-04 11:29:36] 2025-06-04 15:29:15,812 | INFO     | left removable region: 20
[2025-06-04 11:29:36] 2025-06-04 15:29:15,812 | INFO     | sum of square deviations: 447379490.9911509
[2025-06-04 11:29:36] 2025-06-04 15:29:15,813 | INFO     | sum of deviations: 1679559206.097345
[2025-06-04 11:29:36] 2025-06-04 15:29:15,813 | INFO     | mean x: 1749046824.0088496
[2025-06-04 11:29:36] 2025-06-04 15:29:15,813 | INFO     | mean y: 2477319.902654867
[2025-06-04 11:29:36] 2025-06-04 15:29:15,813 | INFO     | -- intersect: -6563822106.678552
[2025-06-04 11:29:36] 2025-06-04 15:29:15,814 | INFO     | intersect: -6563822106.678552
[2025-06-04 11:29:36] 2025-06-04 15:29:15,814 | INFO     | chi2: 0.0002659736132983319
[2025-06-04 11:29:36] 2025-06-04 15:29:15,814 | INFO     | -- intersect: -6563822106.678552
[2025-06-04 11:29:36] 2025-06-04 15:29:15,814 | INFO     | current memory leak: 3.75 B/s (using 113 data points, chi2=0.00)
[2025-06-04 11:29:36] 2025-06-04 15:29:15,815 | INFO     | ..............................
[2025-06-04 11:29:36] 2025-06-04 15:29:15,815 | INFO     | . Timing measurements:
[2025-06-04 11:29:36] 2025-06-04 15:29:15,815 | INFO     | . get job = 0 s
[2025-06-04 11:29:36] 2025-06-04 15:29:15,815 | INFO     | . initial setup = 3 s
[2025-06-04 11:29:36] 2025-06-04 15:29:15,815 | INFO     | . payload setup = 21 s
[2025-06-04 11:29:36] 2025-06-04 15:29:15,815 | INFO     | . stage-in = 0 s
[2025-06-04 11:29:36] 2025-06-04 15:29:15,815 | INFO     | . payload execution = 8765 s
[2025-06-04 11:29:36] 2025-06-04 15:29:15,815 | INFO     | . stage-out = 1 s
[2025-06-04 11:29:36] 2025-06-04 15:29:15,816 | INFO     | . log creation = 0 s
[2025-06-04 11:29:36] 2025-06-04 15:29:15,816 | INFO     | ..............................
[2025-06-04 11:29:36] 2025-06-04 15:29:15,918 | INFO     | 
[2025-06-04 11:29:36] 2025-06-04 15:29:15,918 | INFO     | job summary report
[2025-06-04 11:29:36] 2025-06-04 15:29:15,918 | INFO     | --------------------------------------------------
[2025-06-04 11:29:36] 2025-06-04 15:29:15,919 | INFO     | PanDA job id: 6679447614
[2025-06-04 11:29:36] 2025-06-04 15:29:15,919 | INFO     | task id: 45006595
[2025-06-04 11:29:36] 2025-06-04 15:29:15,919 | INFO     | errors: (none)
[2025-06-04 11:29:36] 2025-06-04 15:29:15,919 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:29:36] 2025-06-04 15:29:15,919 | INFO     | pilot state: finished 
[2025-06-04 11:29:36] 2025-06-04 15:29:15,919 | INFO     | transexitcode: 0
[2025-06-04 11:29:36] 2025-06-04 15:29:15,919 | INFO     | exeerrorcode: 0
[2025-06-04 11:29:36] 2025-06-04 15:29:15,919 | INFO     | exeerrordiag: 
[2025-06-04 11:29:36] 2025-06-04 15:29:15,919 | INFO     | exitcode: 0
[2025-06-04 11:29:36] 2025-06-04 15:29:15,919 | INFO     | exitmsg: OK
[2025-06-04 11:29:36] 2025-06-04 15:29:15,919 | INFO     | cpuconsumptiontime: 48423 s
[2025-06-04 11:29:36] 2025-06-04 15:29:15,920 | INFO     | nevents: 400
[2025-06-04 11:29:36] 2025-06-04 15:29:15,920 | INFO     | neventsw: 0
[2025-06-04 11:29:36] 2025-06-04 15:29:15,920 | INFO     | pid: 29168
[2025-06-04 11:29:36] 2025-06-04 15:29:15,920 | INFO     | pgrp: 29168
[2025-06-04 11:29:36] 2025-06-04 15:29:15,920 | INFO     | corecount: 8
[2025-06-04 11:29:36] 2025-06-04 15:29:15,920 | INFO     | event service: False
[2025-06-04 11:29:36] 2025-06-04 15:29:15,920 | INFO     | sizes: {0: 2397121, 1: 2397320, 12: 2397320, 13: 2397554, 23: 2397610, 8790: 2425595, 8791: 2434592, 8805: 2434706}
[2025-06-04 11:29:36] 2025-06-04 15:29:15,920 | INFO     | --------------------------------------------------
[2025-06-04 11:29:36] 2025-06-04 15:29:15,920 | INFO     | 
[2025-06-04 11:29:36] 2025-06-04 15:29:15,921 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:29:36] 2025-06-04 15:29:15,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,970 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,970 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:29:36] 2025-06-04 15:29:15,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:29:36] 2025-06-04 15:29:15,972 | INFO     | job 6679447614 has completed (purged errors)
[2025-06-04 11:29:36] 2025-06-04 15:29:15,973 | INFO     | overall cleanup function is called
[2025-06-04 11:29:36] 2025-06-04 15:29:16,985 | INFO     | --- collectZombieJob: --- 10, [29168]
[2025-06-04 11:29:36] 2025-06-04 15:29:16,986 | INFO     | zombie collector waiting for pid 29168
[2025-06-04 11:29:36] 2025-06-04 15:29:16,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:29:36] 2025-06-04 15:29:16,986 | INFO     | collected zombie processes
[2025-06-04 11:29:36] 2025-06-04 15:29:16,986 | INFO     | will attempt to kill all subprocesses of pid=29168
[2025-06-04 11:29:36] 2025-06-04 15:29:17,347 | INFO     | process IDs to be killed: [29168] (in reverse order)
[2025-06-04 11:29:36] 2025-06-04 15:29:17,432 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:29:36] 2025-06-04 15:29:17,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:29:36] 2025-06-04 15:29:17,443 | INFO     | did not find any defunct processes belonging to 29168
[2025-06-04 11:29:36] 2025-06-04 15:29:17,453 | INFO     | did not find any defunct processes belonging to 29168
[2025-06-04 11:29:36] 2025-06-04 15:29:17,454 | INFO     | ready for new job
[2025-06-04 11:29:36] 2025-06-04 15:29:17,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:29:36] 2025-06-04 15:29:17,456 | INFO     | **************************************
[2025-06-04 11:29:36] 2025-06-04 15:29:17,456 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:29:36] 2025-06-04 15:29:17,456 | INFO     | **************************************
[2025-06-04 11:29:36] 2025-06-04 15:29:17,456 | INFO     | 
[2025-06-04 11:29:36] 2025-06-04 15:29:17,459 | INFO     | architecture information:
[2025-06-04 11:29:36] 2025-06-04 15:29:17,460 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:29:36] 2025-06-04 15:29:17,477 | INFO     | cat /etc/os-release:
[2025-06-04 11:29:36] NAME="CentOS Linux"
[2025-06-04 11:29:36] VERSION="7 (Core)"
[2025-06-04 11:29:36] ID="centos"
[2025-06-04 11:29:36] ID_LIKE="rhel fedora"
[2025-06-04 11:29:36] VERSION_ID="7"
[2025-06-04 11:29:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:29:36] ANSI_COLOR="0;31"
[2025-06-04 11:29:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:29:36] HOME_URL="https://www.centos.org/"
[2025-06-04 11:29:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:29:36] 
[2025-06-04 11:29:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:29:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:29:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:29:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:29:36] 
[2025-06-04 11:29:36] 2025-06-04 15:29:17,477 | INFO     | **************************************
[2025-06-04 11:29:36] 2025-06-04 15:29:17,981 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:29:36] 2025-06-04 15:29:18,001 | INFO     | sufficient remaining disk space (56756273152 B)
[2025-06-04 11:29:36] 2025-06-04 15:29:18,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:29:36] 2025-06-04 15:29:18,017 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:29:36] 2025-06-04 15:29:18,017 | INFO     | update_server=False
[2025-06-04 11:29:36] 2025-06-04 15:29:18,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:29:36] 2025-06-04 15:29:18,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:29:36] 2025-06-04 15:29:18,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:29:36] 2025-06-04 15:29:18,261 | INFO     | all data control threads have been joined
[2025-06-04 11:29:36] 2025-06-04 15:29:18,302 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:29:36] 2025-06-04 15:29:18,302 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:29:36] 2025-06-04 15:29:18,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:29:36] 2025-06-04 15:29:18,302 | INFO     | will abort loop
[2025-06-04 11:29:36] 2025-06-04 15:29:18,764 | INFO     | all job control threads have been joined
[2025-06-04 11:29:36] 2025-06-04 15:29:18,882 | INFO     | all payload control threads have been joined
[2025-06-04 11:29:36] 2025-06-04 15:29:19,024 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:19,094 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:19,280 | INFO     | [data] control thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:19,307 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:19,373 | INFO     | PID=18054 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 11:29:36] 2025-06-04 15:29:19,373 | INFO     | .. there are 28 such processes running
[2025-06-04 11:29:36] 2025-06-04 15:29:19,373 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:29:36] 2025-06-04 15:29:19,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:29:36] 2025-06-04 15:29:19,373 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:29:36] 2025-06-04 15:29:19,393 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:19,408 | INFO     | [job] validate thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:19,769 | INFO     | [job] control thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:19,843 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:19,860 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:19,888 | INFO     | [payload] control thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:20,061 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:20,171 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:20,412 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:20,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:29:36] 2025-06-04 15:29:21,929 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:22,026 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:28,738 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:29:36] 2025-06-04 15:29:29,743 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:29:36] 2025-06-04 15:29:30,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471199926080)>', '<ExcThread(monitor, started 140470319572736)>']
[2025-06-04 11:29:36] 2025-06-04 15:29:31,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:29:36] 2025-06-04 15:29:31,436 | INFO     | [monitor] control thread has ended
[2025-06-04 11:29:36] 2025-06-04 15:29:35,948 | INFO     | all workflow threads have been joined
[2025-06-04 11:29:36] 2025-06-04 15:29:35,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:29:36] 2025-06-04 15:29:35,969 | INFO     | traces error code: 0
[2025-06-04 11:29:36] 2025-06-04 15:29:35,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:29:36] 2025-06-04 15:29:36,179 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:29:36] 2025-06-04 15:29:36,182 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:29:36] 2025-06-04 15:29:36,185 [wrapper] pilotpid: 18054
[2025-06-04 11:29:36] 2025-06-04 15:29:36,187 [wrapper] Pilot exit status: 0
[2025-06-04 11:29:36] 2025-06-04 15:29:36,239 [wrapper] pandaids: 6679447614
[2025-06-04 11:29:36] 2025-06-04 15:29:36,577 [wrapper] cleanup supervisor_pilot 20093 18055
[2025-06-04 11:29:36] 2025-06-04 15:29:36,581 [wrapper] Test setup, not cleaning
[2025-06-04 11:29:36] 2025-06-04 15:29:36,583 [wrapper] apfmon messages muted
[2025-06-04 11:29:36] 2025-06-04 15:29:36,588 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:29:36] 2025-06-04 15:29:36,591 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:29:36]  *** Error codes and diagnostics ***
[2025-06-04 11:29:36]     "exeErrorCode": 0,
[2025-06-04 11:29:36]     "exeErrorDiag": "",
[2025-06-04 11:29:36]     "pilotErrorCode": 0,
[2025-06-04 11:29:36]     "pilotErrorDiag": "",
[2025-06-04 11:29:36]  *** Listing of results directory ***
[2025-06-04 11:29:36] total 389416
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 05:03 queuedata.json
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 05:04 pilot3.tar.gz
[2025-06-04 11:29:36] -rwx------ 1 boincer umatlas     37140 Jun  4 05:04 runpilot2-wrapper.sh
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:29:36] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:01 run_atlas
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:01 job.xml
[2025-06-04 11:29:36] -rw-r--r-- 2 boincer umatlas 214125776 Jun  4 09:01 EVNT.45006593._001817.pool.root.1
[2025-06-04 11:29:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:01 start_atlas.sh
[2025-06-04 11:29:36] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:01 shared
[2025-06-04 11:29:36] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 09:01 input.tar.gz
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:01 boinc_lockfile
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 09:01 pandaJob.out
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas    986811 Jun  4 09:01 agis_schedconf.cvmfs.json
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas   1598969 Jun  4 09:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:29:36] drwx------ 4 boincer umatlas      4096 Jun  4 09:01 pilot3
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas 178488040 Jun  4 11:28 HITS.45006595._056322.pool.root.1
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas        95 Jun  4 11:28 pilot_heartbeat.json
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas       530 Jun  4 11:28 boinc_task_state.xml
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas      1074 Jun  4 11:28 memory_monitor_summary.json
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas    359753 Jun  4 11:29 log.45006595._056322.job.log.tgz.1
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas      7750 Jun  4 11:29 heartbeat.json
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas      6047 Jun  4 11:29 init_data.xml
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:29 boinc_mmap_file
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:29 wrapper_checkpoint.txt
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas      5005 Jun  4 11:29 pilotlog.txt
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas    800862 Jun  4 11:29 log.45006595._056322.job.log.1
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas       357 Jun  4 11:29 output.list
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:29 runtime_log
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas   1177600 Jun  4 11:29 result.tar.gz
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 11:29 runtime_log.err
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas       658 Jun  4 11:29 jBmLDmTEzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6unKDm2bPW4n.diag
[2025-06-04 11:29:36] -rw-r--r-- 1 boincer umatlas     20689 Jun  4 11:29 stderr.txt
[2025-06-04 11:29:36] HITS file was successfully produced:
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas 178488040 Jun  4 11:28 shared/HITS.pool.root.1
[2025-06-04 11:29:36]  *** Contents of shared directory: ***
[2025-06-04 11:29:36] total 385088
[2025-06-04 11:29:36] -rw-r--r-- 2 boincer umatlas 214125776 Jun  4 09:01 ATLAS.root_0
[2025-06-04 11:29:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:01 start_atlas.sh
[2025-06-04 11:29:36] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 09:01 input.tar.gz
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas 178488040 Jun  4 11:28 HITS.pool.root.1
[2025-06-04 11:29:36] -rw------- 1 boincer umatlas   1177600 Jun  4 11:29 result.tar.gz
11:29:38 (7273): run_atlas exited; CPU time 48708.241692
11:29:38 (7273): called boinc_finish(0)

</stderr_txt>
]]>

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