Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:01:59 (65445): wrapper (7.7.26015): starting
09:01:59 (65445): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:01:59] Arguments: --nthreads 8
[2025-06-04 09:01:59] Threads: 8
[2025-06-04 09:01:59] Checking for CVMFS
[2025-06-04 09:01:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:02:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:02:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:02:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:02:01] 2.11.2.0 5309 11399 161232 146780 2 550 13983174 18432000 17426 130560 0 65373183 99.740 33004440 64357 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:02:01] CVMFS is ok
[2025-06-04 09:02:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:02:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:02:01] Further information can be found at the LHC@home message board.
[2025-06-04 09:02:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:02:01] Checking for apptainer binary...
[2025-06-04 09:02:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:02:01] Running /usr/bin/apptainer --version
[2025-06-04 09:02:01] apptainer version 1.3.2-1.el7
[2025-06-04 09:02:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:02:04] c-212-7.aglt2.org
[2025-06-04 09:02:04] apptainer works
[2025-06-04 09:02:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:02:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:02:04] Starting ATLAS job with PandaID=6679227077
[2025-06-04 09:02:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:50:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:50:07] 2025-06-04 14:49:41,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:50:07] 2025-06-04 14:49:43,819 | INFO     | monitor loop #489: job 0:6679227077 is in state 'finished'
[2025-06-04 10:50:07] 2025-06-04 14:49:43,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:50:07] 2025-06-04 14:49:46,324 | INFO     | monitor loop #490: job 0:6679227077 is in state 'finished'
[2025-06-04 10:50:07] 2025-06-04 14:49:46,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:50:07] 2025-06-04 14:49:46,379 | INFO     | PID=72284 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 10:50:07] 2025-06-04 14:49:46,379 | INFO     | .. there are 18 such processes running
[2025-06-04 10:50:07] 2025-06-04 14:49:46,822 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:50:07] 2025-06-04 14:49:46,822 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6679227077/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:50:07] 2025-06-04 14:49:46,823 | INFO     | extracted standard info from prmon json
[2025-06-04 10:50:07] 2025-06-04 14:49:46,823 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:50:07] 2025-06-04 14:49:46,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:50:07] 2025-06-04 14:49:46,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:50:07] 2025-06-04 14:49:46,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:50:07] 2025-06-04 14:49:46,826 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:50:07] 2025-06-04 14:49:46,826 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,826 | INFO     | sum of deviations: 17509494289.999996
[2025-06-04 10:50:07] 2025-06-04 14:49:46,826 | INFO     | mean x: 1749045426.0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,826 | INFO     | mean y: 2387484.0582524273
[2025-06-04 10:50:07] 2025-06-04 14:49:46,827 | INFO     | -- intersect: -90388683539.57388
[2025-06-04 10:50:07] 2025-06-04 14:49:46,827 | INFO     | intersect: -90388683539.57388
[2025-06-04 10:50:07] 2025-06-04 14:49:46,827 | INFO     | chi2: 3.2412050206587897
[2025-06-04 10:50:07] 2025-06-04 14:49:46,827 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 10:50:07] 2025-06-04 14:49:46,827 | INFO     | sum of deviations: 23062591104.000004
[2025-06-04 10:50:07] 2025-06-04 14:49:46,828 | INFO     | mean x: 1749045273.5
[2025-06-04 10:50:07] 2025-06-04 14:49:46,828 | INFO     | mean y: 2404649.8163265307
[2025-06-04 10:50:07] 2025-06-04 14:49:46,828 | INFO     | -- intersect: -138226135617.2119
[2025-06-04 10:50:07] 2025-06-04 14:49:46,828 | INFO     | intersect: -138226135617.2119
[2025-06-04 10:50:07] 2025-06-04 14:49:46,828 | INFO     | chi2: 2.499335801734966
[2025-06-04 10:50:07] 2025-06-04 14:49:46,828 | INFO     | current chi2=2.499335801734966 (change=22.88868535607277 %)
[2025-06-04 10:50:07] 2025-06-04 14:49:46,828 | INFO     | right removable region: 97
[2025-06-04 10:50:07] 2025-06-04 14:49:46,828 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 10:50:07] 2025-06-04 14:49:46,829 | INFO     | sum of deviations: -4871795866.0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,829 | INFO     | mean x: 1749045578.5
[2025-06-04 10:50:07] 2025-06-04 14:49:46,829 | INFO     | mean y: 2459096.5102040814
[2025-06-04 10:50:07] 2025-06-04 14:49:46,829 | INFO     | -- intersect: 29202185416.554512
[2025-06-04 10:50:07] 2025-06-04 14:49:46,829 | INFO     | intersect: 29202185416.554512
[2025-06-04 10:50:07] 2025-06-04 14:49:46,829 | INFO     | chi2: 0.8177646367374779
[2025-06-04 10:50:07] 2025-06-04 14:49:46,829 | INFO     | current chi2=0.8177646367374779 (change=74.7697343572773 %)
[2025-06-04 10:50:07] 2025-06-04 14:49:46,829 | INFO     | sum of square deviations: 249388862.0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,830 | INFO     | sum of deviations: -5357725953.000001
[2025-06-04 10:50:07] 2025-06-04 14:49:46,830 | INFO     | mean x: 1749045731.0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,830 | INFO     | mean y: 2460694.634408602
[2025-06-04 10:50:07] 2025-06-04 14:49:46,830 | INFO     | -- intersect: 37577946748.067535
[2025-06-04 10:50:07] 2025-06-04 14:49:46,830 | INFO     | intersect: 37577946748.067535
[2025-06-04 10:50:07] 2025-06-04 14:49:46,830 | INFO     | chi2: 0.8057009827895466
[2025-06-04 10:50:07] 2025-06-04 14:49:46,830 | INFO     | current chi2=0.8057009827895466 (change=1.4751987804290465 %)
[2025-06-04 10:50:07] 2025-06-04 14:49:46,830 | INFO     | left removable region: 20
[2025-06-04 10:50:07] 2025-06-04 14:49:46,830 | INFO     | sum of square deviations: 141539398.0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,831 | INFO     | sum of deviations: 573230176.0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,831 | INFO     | mean x: 1749045853.0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,831 | INFO     | mean y: 2484609.25974026
[2025-06-04 10:50:07] 2025-06-04 14:49:46,831 | INFO     | -- intersect: -7081096897.475651
[2025-06-04 10:50:07] 2025-06-04 14:49:46,831 | INFO     | intersect: -7081096897.475651
[2025-06-04 10:50:07] 2025-06-04 14:49:46,831 | INFO     | chi2: 4.689376169295294e-05
[2025-06-04 10:50:07] 2025-06-04 14:49:46,831 | INFO     | -- intersect: -7081096897.475651
[2025-06-04 10:50:07] 2025-06-04 14:49:46,831 | INFO     | current memory leak: 4.05 B/s (using 77 data points, chi2=0.00)
[2025-06-04 10:50:07] 2025-06-04 14:49:46,832 | INFO     | ..............................
[2025-06-04 10:50:07] 2025-06-04 14:49:46,832 | INFO     | . Timing measurements:
[2025-06-04 10:50:07] 2025-06-04 14:49:46,832 | INFO     | . get job = 0 s
[2025-06-04 10:50:07] 2025-06-04 14:49:46,832 | INFO     | . initial setup = 4 s
[2025-06-04 10:50:07] 2025-06-04 14:49:46,832 | INFO     | . payload setup = 44 s
[2025-06-04 10:50:07] 2025-06-04 14:49:46,832 | INFO     | . stage-in = 0 s
[2025-06-04 10:50:07] 2025-06-04 14:49:46,832 | INFO     | . payload execution = 6272 s
[2025-06-04 10:50:07] 2025-06-04 14:49:46,832 | INFO     | . stage-out = 1 s
[2025-06-04 10:50:07] 2025-06-04 14:49:46,832 | INFO     | . log creation = 0 s
[2025-06-04 10:50:07] 2025-06-04 14:49:46,832 | INFO     | ..............................
[2025-06-04 10:50:07] 2025-06-04 14:49:46,914 | INFO     | 
[2025-06-04 10:50:07] 2025-06-04 14:49:46,914 | INFO     | job summary report
[2025-06-04 10:50:07] 2025-06-04 14:49:46,914 | INFO     | --------------------------------------------------
[2025-06-04 10:50:07] 2025-06-04 14:49:46,914 | INFO     | PanDA job id: 6679227077
[2025-06-04 10:50:07] 2025-06-04 14:49:46,914 | INFO     | task id: 45006595
[2025-06-04 10:50:07] 2025-06-04 14:49:46,914 | INFO     | errors: (none)
[2025-06-04 10:50:07] 2025-06-04 14:49:46,914 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | pilot state: finished 
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | transexitcode: 0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | exeerrorcode: 0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | exeerrordiag: 
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | exitcode: 0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | exitmsg: OK
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | cpuconsumptiontime: 30511 s
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | nevents: 400
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | neventsw: 0
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | pid: 84753
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | pgrp: 84753
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | corecount: 8
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | event service: False
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | sizes: {0: 2397292, 11: 2397292, 22: 2397554, 32: 2397554, 6320: 2424236, 6322: 2433177, 6325: 2433361, 6353: 2433531}
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | --------------------------------------------------
[2025-06-04 10:50:07] 2025-06-04 14:49:46,915 | INFO     | 
[2025-06-04 10:50:07] 2025-06-04 14:49:46,916 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-04 10:50:07] 2025-06-04 14:49:47,171 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,171 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,173 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:50:07] 2025-06-04 14:49:47,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,173 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:50:07] 2025-06-04 14:49:47,173 | INFO     | job 6679227077 has completed (purged errors)
[2025-06-04 10:50:07] 2025-06-04 14:49:47,173 | INFO     | overall cleanup function is called
[2025-06-04 10:50:07] 2025-06-04 14:49:48,181 | INFO     | --- collectZombieJob: --- 10, [84753]
[2025-06-04 10:50:07] 2025-06-04 14:49:48,181 | INFO     | zombie collector waiting for pid 84753
[2025-06-04 10:50:07] 2025-06-04 14:49:48,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:50:07] 2025-06-04 14:49:48,181 | INFO     | collected zombie processes
[2025-06-04 10:50:07] 2025-06-04 14:49:48,181 | INFO     | will attempt to kill all subprocesses of pid=84753
[2025-06-04 10:50:07] 2025-06-04 14:49:48,467 | INFO     | process IDs to be killed: [84753] (in reverse order)
[2025-06-04 10:50:07] 2025-06-04 14:49:49,341 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:50:07] 2025-06-04 14:49:49,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:50:07] 2025-06-04 14:49:49,350 | INFO     | did not find any defunct processes belonging to 84753
[2025-06-04 10:50:07] 2025-06-04 14:49:49,357 | INFO     | did not find any defunct processes belonging to 84753
[2025-06-04 10:50:07] 2025-06-04 14:49:49,357 | INFO     | ready for new job
[2025-06-04 10:50:07] 2025-06-04 14:49:49,357 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:50:07] 2025-06-04 14:49:49,359 | INFO     | **************************************
[2025-06-04 10:50:07] 2025-06-04 14:49:49,359 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:50:07] 2025-06-04 14:49:49,359 | INFO     | **************************************
[2025-06-04 10:50:07] 2025-06-04 14:49:49,359 | INFO     | 
[2025-06-04 10:50:07] 2025-06-04 14:49:49,363 | INFO     | architecture information:
[2025-06-04 10:50:07] 2025-06-04 14:49:49,363 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:50:07] 2025-06-04 14:49:49,417 | INFO     | cat /etc/os-release:
[2025-06-04 10:50:07] NAME="CentOS Linux"
[2025-06-04 10:50:07] VERSION="7 (Core)"
[2025-06-04 10:50:07] ID="centos"
[2025-06-04 10:50:07] ID_LIKE="rhel fedora"
[2025-06-04 10:50:07] VERSION_ID="7"
[2025-06-04 10:50:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:50:07] ANSI_COLOR="0;31"
[2025-06-04 10:50:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:50:07] HOME_URL="https://www.centos.org/"
[2025-06-04 10:50:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:50:07] 
[2025-06-04 10:50:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:50:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:50:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:50:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:50:07] 
[2025-06-04 10:50:07] 2025-06-04 14:49:49,418 | INFO     | **************************************
[2025-06-04 10:50:07] 2025-06-04 14:49:49,921 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-04 10:50:07] 2025-06-04 14:49:50,030 | INFO     | sufficient remaining disk space (104084799488 B)
[2025-06-04 10:50:07] 2025-06-04 14:49:50,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:50:07] 2025-06-04 14:49:50,030 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:50:07] 2025-06-04 14:49:50,030 | INFO     | update_server=False
[2025-06-04 10:50:07] 2025-06-04 14:49:50,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:50:07] 2025-06-04 14:49:50,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:50:07] 2025-06-04 14:49:50,031 | INFO     | aborting loop
[2025-06-04 10:50:07] 2025-06-04 14:49:50,347 | INFO     | all data control threads have been joined
[2025-06-04 10:50:07] 2025-06-04 14:49:50,418 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:50:07] 2025-06-04 14:49:50,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:50:07] 2025-06-04 14:49:50,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:50:07] 2025-06-04 14:49:50,906 | INFO     | all payload control threads have been joined
[2025-06-04 10:50:07] 2025-06-04 14:49:50,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:50:07] 2025-06-04 14:49:51,037 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:51,041 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:51,353 | INFO     | [data] control thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:51,378 | INFO     | all job control threads have been joined
[2025-06-04 10:50:07] 2025-06-04 14:49:51,385 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:51,428 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:51,555 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:51,588 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:50:07] 2025-06-04 14:49:51,912 | INFO     | [payload] control thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:51,931 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:50:07] 2025-06-04 14:49:51,959 | INFO     | [job] validate thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:51,999 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:52,098 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:52,261 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:52,383 | INFO     | [job] control thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:52,931 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:52,953 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:49:55,598 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:50:00,181 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:50:07] 2025-06-04 14:50:01,186 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:50:07] 2025-06-04 14:50:01,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455285548864)>', '<ExcThread(monitor, started 140454993573632)>']
[2025-06-04 10:50:07] 2025-06-04 14:50:02,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:50:07] 2025-06-04 14:50:02,490 | INFO     | [monitor] control thread has ended
[2025-06-04 10:50:07] 2025-06-04 14:50:06,907 | INFO     | all workflow threads have been joined
[2025-06-04 10:50:07] 2025-06-04 14:50:06,907 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:50:07] 2025-06-04 14:50:06,908 | INFO     | traces error code: 0
[2025-06-04 10:50:07] 2025-06-04 14:50:06,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:50:07] 2025-06-04 14:50:07,118 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:50:07] 2025-06-04 14:50:07,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:50:07] 2025-06-04 14:50:07,198 [wrapper] pilotpid: 72284
[2025-06-04 10:50:07] 2025-06-04 14:50:07,233 [wrapper] Pilot exit status: 0
[2025-06-04 10:50:07] 2025-06-04 14:50:07,409 [wrapper] pandaids: 6679227077
[2025-06-04 10:50:07] 2025-06-04 14:50:07,741 [wrapper] cleanup supervisor_pilot  5085 72285
[2025-06-04 10:50:07] 2025-06-04 14:50:07,744 [wrapper] Test setup, not cleaning
[2025-06-04 10:50:07] 2025-06-04 14:50:07,756 [wrapper] apfmon messages muted
[2025-06-04 10:50:07] 2025-06-04 14:50:07,765 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:50:07] 2025-06-04 14:50:07,773 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:50:07]  *** Error codes and diagnostics ***
[2025-06-04 10:50:07]     "exeErrorCode": 0,
[2025-06-04 10:50:07]     "exeErrorDiag": "",
[2025-06-04 10:50:07]     "pilotErrorCode": 0,
[2025-06-04 10:50:07]     "pilotErrorDiag": "",
[2025-06-04 10:50:07]  *** Listing of results directory ***
[2025-06-04 10:50:07] total 385448
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:50:07] -rwx------ 1 boincer umatlas     37140 Jun  4 04:54 runpilot2-wrapper.sh
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:54 queuedata.json
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:50:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:01 run_atlas
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:01 job.xml
[2025-06-04 10:50:07] -rw-r--r-- 2 boincer umatlas 214172288 Jun  4 09:01 EVNT.45006593._001063.pool.root.1
[2025-06-04 10:50:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:01 start_atlas.sh
[2025-06-04 10:50:07] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:01 shared
[2025-06-04 10:50:07] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 09:01 input.tar.gz
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:01 boinc_lockfile
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 09:02 pandaJob.out
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas    986811 Jun  4 09:02 agis_schedconf.cvmfs.json
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas   1598969 Jun  4 09:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:50:07] drwx------ 4 boincer umatlas      4096 Jun  4 09:02 pilot3
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas      6387 Jun  4 10:47 init_data.xml
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas 174844685 Jun  4 10:48 HITS.45006595._056016.pool.root.1
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:48 boinc_task_state.xml
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas        95 Jun  4 10:49 pilot_heartbeat.json
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas      1064 Jun  4 10:49 memory_monitor_summary.json
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas    323763 Jun  4 10:49 log.45006595._056016.job.log.tgz.1
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:49 boinc_mmap_file
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:49 wrapper_checkpoint.txt
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas      7702 Jun  4 10:49 heartbeat.json
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas      4426 Jun  4 10:50 pilotlog.txt
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas    602851 Jun  4 10:50 log.45006595._056016.job.log.1
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas       357 Jun  4 10:50 output.list
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:50 runtime_log
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas    942080 Jun  4 10:50 result.tar.gz
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 10:50 runtime_log.err
[2025-06-04 10:50:07] -rw------- 1 boincer umatlas       657 Jun  4 10:50 69ALDm73yg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmozaKDmdllPWn.diag
[2025-06-04 10:50:07] -rw-r--r-- 1 boincer umatlas     21106 Jun  4 10:50 stderr.txt
[2025-06-04 10:50:08] HITS file was successfully produced:
[2025-06-04 10:50:08] -rw------- 1 boincer umatlas 174844685 Jun  4 10:48 shared/HITS.pool.root.1
[2025-06-04 10:50:08]  *** Contents of shared directory: ***
[2025-06-04 10:50:08] total 381344
[2025-06-04 10:50:08] -rw-r--r-- 2 boincer umatlas 214172288 Jun  4 09:01 ATLAS.root_0
[2025-06-04 10:50:08] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:01 start_atlas.sh
[2025-06-04 10:50:08] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 09:01 input.tar.gz
[2025-06-04 10:50:08] -rw------- 1 boincer umatlas 174844685 Jun  4 10:48 HITS.pool.root.1
[2025-06-04 10:50:08] -rw------- 1 boincer umatlas    942080 Jun  4 10:50 result.tar.gz
10:50:09 (65445): run_atlas exited; CPU time 30234.497701
10:50:09 (65445): called boinc_finish(0)

</stderr_txt>
]]>

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