Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:20:58 (10295): wrapper (7.7.26015): starting
01:20:58 (10295): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 01:20:58] Arguments: --nthreads 8
[2025-06-05 01:20:58] Threads: 8
[2025-06-05 01:20:58] Checking for CVMFS
[2025-06-05 01:20:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:20:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:20:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:21:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:21:00] 2.11.2.0 28846 34027 87296 146798 0 14 16472961 25165825 3138 130560 0 17444244 99.812 20771908 4409 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 01:21:00] CVMFS is ok
[2025-06-05 01:21:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:21:00] Checking for apptainer binary...
[2025-06-05 01:21:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:21:00] Running /usr/bin/apptainer --version
[2025-06-05 01:21:01] apptainer version 1.3.2-1.el7
[2025-06-05 01:21:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:21:15] cg-vwn318.simple-grid.lan
[2025-06-05 01:21:15] apptainer works
[2025-06-05 01:21:15] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:21:15] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:21:15] Starting ATLAS job with PandaID=6679195585
[2025-06-05 01:21:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:27:10]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:27:10] 2025-06-05 03:18:08,436 | INFO     | extracted standard info from prmon json
[2025-06-05 05:27:10] 2025-06-05 03:18:08,436 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:27:10] 2025-06-05 03:18:08,436 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:27:10] 2025-06-05 03:18:08,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:27:10] 2025-06-05 03:18:08,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:27:10] 2025-06-05 03:18:08,442 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:27:10] 2025-06-05 03:18:08,442 | INFO     | sum of square deviations: 3301699115.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,444 | INFO     | sum of deviations: 77723318024.50002
[2025-06-05 05:27:10] 2025-06-05 03:18:08,444 | INFO     | mean x: 1749086668.5
[2025-06-05 05:27:10] 2025-06-05 03:18:08,444 | INFO     | mean y: 2428508.6772727272
[2025-06-05 05:27:10] 2025-06-05 03:18:08,444 | INFO     | -- intersect: -41171771396.64594
[2025-06-05 05:27:10] 2025-06-05 03:18:08,452 | INFO     | intersect: -41171771396.64594
[2025-06-05 05:27:10] 2025-06-05 03:18:08,452 | INFO     | chi2: 8.113083250931869
[2025-06-05 05:27:10] 2025-06-05 03:18:08,453 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,455 | INFO     | sum of deviations: 90358212980.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,455 | INFO     | mean x: 1749086516.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,455 | INFO     | mean y: 2437079.3906976744
[2025-06-05 05:27:10] 2025-06-05 03:18:08,455 | INFO     | -- intersect: -51283053788.18194
[2025-06-05 05:27:10] 2025-06-05 03:18:08,455 | INFO     | intersect: -51283053788.18194
[2025-06-05 05:27:10] 2025-06-05 03:18:08,456 | INFO     | chi2: 7.424863769028836
[2025-06-05 05:27:10] 2025-06-05 03:18:08,456 | INFO     | current chi2=7.424863769028836 (change=8.482835201080716 %)
[2025-06-05 05:27:10] 2025-06-05 03:18:08,456 | INFO     | right removable region: 214
[2025-06-05 05:27:10] 2025-06-05 03:18:08,456 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,458 | INFO     | sum of deviations: 1624983392.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,458 | INFO     | mean x: 1749086821.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,458 | INFO     | mean y: 2481206.888372093
[2025-06-05 05:27:10] 2025-06-05 03:18:08,458 | INFO     | -- intersect: -919826602.154291
[2025-06-05 05:27:10] 2025-06-05 03:18:08,458 | INFO     | intersect: -919826602.154291
[2025-06-05 05:27:10] 2025-06-05 03:18:08,459 | INFO     | chi2: 3.0678316935195724
[2025-06-05 05:27:10] 2025-06-05 03:18:08,459 | INFO     | current chi2=3.0678316935195724 (change=62.18661144433343 %)
[2025-06-05 05:27:10] 2025-06-05 03:18:08,459 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 05:27:10] 2025-06-05 03:18:08,461 | INFO     | sum of deviations: -45678619630.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,461 | INFO     | mean x: 1749086973.5
[2025-06-05 05:27:10] 2025-06-05 03:18:08,461 | INFO     | mean y: 2515404.257142857
[2025-06-05 05:27:10] 2025-06-05 03:18:08,461 | INFO     | -- intersect: 27825128512.86623
[2025-06-05 05:27:10] 2025-06-05 03:18:08,461 | INFO     | intersect: 27825128512.86623
[2025-06-05 05:27:10] 2025-06-05 03:18:08,462 | INFO     | chi2: 1.0342632275491375
[2025-06-05 05:27:10] 2025-06-05 03:18:08,462 | INFO     | current chi2=1.0342632275491375 (change=66.28683282287308 %)
[2025-06-05 05:27:10] 2025-06-05 03:18:08,462 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,464 | INFO     | sum of deviations: -50078819616.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,464 | INFO     | mean x: 1749087126.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,464 | INFO     | mean y: 2518695.263414634
[2025-06-05 05:27:10] 2025-06-05 03:18:08,464 | INFO     | -- intersect: 32792098718.782696
[2025-06-05 05:27:10] 2025-06-05 03:18:08,464 | INFO     | intersect: 32792098718.782696
[2025-06-05 05:27:10] 2025-06-05 03:18:08,465 | INFO     | chi2: 0.9696903778827544
[2025-06-05 05:27:10] 2025-06-05 03:18:08,465 | INFO     | current chi2=0.9696903778827544 (change=6.243367060375863 %)
[2025-06-05 05:27:10] 2025-06-05 03:18:08,465 | INFO     | left removable region: 30
[2025-06-05 05:27:10] 2025-06-05 03:18:08,465 | INFO     | sum of square deviations: 1931608310.0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,466 | INFO     | sum of deviations: -16174954620.499998
[2025-06-05 05:27:10] 2025-06-05 03:18:08,467 | INFO     | mean x: 1749087400.5
[2025-06-05 05:27:10] 2025-06-05 03:18:08,467 | INFO     | mean y: 2513117.907608696
[2025-06-05 05:27:10] 2025-06-05 03:18:08,467 | INFO     | -- intersect: 14649069142.703238
[2025-06-05 05:27:10] 2025-06-05 03:18:08,467 | INFO     | intersect: 14649069142.703238
[2025-06-05 05:27:10] 2025-06-05 03:18:08,467 | INFO     | chi2: 0.1265483237716123
[2025-06-05 05:27:10] 2025-06-05 03:18:08,468 | INFO     | -- intersect: 14649069142.703238
[2025-06-05 05:27:10] 2025-06-05 03:18:08,468 | INFO     | current memory leak: -8.37 B/s (using 184 data points, chi2=0.13)
[2025-06-05 05:27:10] 2025-06-05 03:18:08,469 | INFO     | ..............................
[2025-06-05 05:27:10] 2025-06-05 03:18:08,469 | INFO     | . Timing measurements:
[2025-06-05 05:27:10] 2025-06-05 03:18:08,469 | INFO     | . get job = 0 s
[2025-06-05 05:27:10] 2025-06-05 03:18:08,469 | INFO     | . initial setup = 6 s
[2025-06-05 05:27:10] 2025-06-05 03:18:08,469 | INFO     | . payload setup = 163 s
[2025-06-05 05:27:10] 2025-06-05 03:18:08,469 | INFO     | . stage-in = 0 s
[2025-06-05 05:27:10] 2025-06-05 03:18:08,469 | INFO     | . payload execution = 13563 s
[2025-06-05 05:27:10] 2025-06-05 03:18:08,469 | INFO     | . stage-out = 4 s
[2025-06-05 05:27:10] 2025-06-05 03:18:08,469 | INFO     | . log creation = 1 s
[2025-06-05 05:27:10] 2025-06-05 03:18:08,470 | INFO     | ..............................
[2025-06-05 05:27:10] 2025-06-05 03:18:08,592 | INFO     | 
[2025-06-05 05:27:10] 2025-06-05 03:18:08,592 | INFO     | job summary report
[2025-06-05 05:27:10] 2025-06-05 03:18:08,592 | INFO     | --------------------------------------------------
[2025-06-05 05:27:10] 2025-06-05 03:18:08,592 | INFO     | PanDA job id: 6679195585
[2025-06-05 05:27:10] 2025-06-05 03:18:08,592 | INFO     | task id: 45006595
[2025-06-05 05:27:10] 2025-06-05 03:18:08,592 | INFO     | errors: (none)
[2025-06-05 05:27:10] 2025-06-05 03:18:08,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:27:10] 2025-06-05 03:18:08,593 | INFO     | pilot state: finished 
[2025-06-05 05:27:10] 2025-06-05 03:18:08,593 | INFO     | transexitcode: 0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,593 | INFO     | exeerrorcode: 0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,593 | INFO     | exeerrordiag: 
[2025-06-05 05:27:10] 2025-06-05 03:18:08,593 | INFO     | exitcode: 0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,593 | INFO     | exitmsg: OK
[2025-06-05 05:27:10] 2025-06-05 03:18:08,593 | INFO     | cpuconsumptiontime: 49954 s
[2025-06-05 05:27:10] 2025-06-05 03:18:08,593 | INFO     | nevents: 400
[2025-06-05 05:27:10] 2025-06-05 03:18:08,593 | INFO     | neventsw: 0
[2025-06-05 05:27:10] 2025-06-05 03:18:08,593 | INFO     | pid: 26280
[2025-06-05 05:27:10] 2025-06-05 03:18:08,594 | INFO     | pgrp: 26280
[2025-06-05 05:27:10] 2025-06-05 03:18:08,594 | INFO     | corecount: 8
[2025-06-05 05:27:10] 2025-06-05 03:18:08,594 | INFO     | event service: False
[2025-06-05 05:27:10] 2025-06-05 03:18:08,594 | INFO     | sizes: {0: 2397122, 1: 2397321, 12: 2397321, 23: 2397349, 33: 2397377, 44: 2397433, 55: 2397589, 66: 2397617, 76: 2397645, 87: 2397701, 92: 2397935, 98: 2398243, 1
[2025-06-05 05:27:10] 2025-06-05 03:18:08,594 | INFO     | --------------------------------------------------
[2025-06-05 05:27:10] 2025-06-05 03:18:08,594 | INFO     | 
[2025-06-05 05:27:10] 2025-06-05 03:18:08,594 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-05 05:27:10] 2025-06-05 03:18:08,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,938 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:27:10] 2025-06-05 03:18:08,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:27:10] 2025-06-05 03:18:08,939 | INFO     | job 6679195585 has completed (purged errors)
[2025-06-05 05:27:10] 2025-06-05 03:18:08,939 | INFO     | overall cleanup function is called
[2025-06-05 05:27:10] 2025-06-05 03:18:09,948 | INFO     | --- collectZombieJob: --- 10, [26280]
[2025-06-05 05:27:10] 2025-06-05 03:18:09,948 | INFO     | zombie collector waiting for pid 26280
[2025-06-05 05:27:10] 2025-06-05 03:18:09,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:27:10] 2025-06-05 03:18:09,948 | INFO     | collected zombie processes
[2025-06-05 05:27:10] 2025-06-05 03:18:09,948 | INFO     | will attempt to kill all subprocesses of pid=26280
[2025-06-05 05:27:10] 2025-06-05 03:18:10,057 | INFO     | process IDs to be killed: [26280] (in reverse order)
[2025-06-05 05:27:10] 2025-06-05 03:18:10,814 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:27:10] 2025-06-05 03:18:10,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:27:10] 2025-06-05 03:18:10,818 | INFO     | did not find any defunct processes belonging to 26280
[2025-06-05 05:27:10] 2025-06-05 03:18:10,822 | INFO     | did not find any defunct processes belonging to 26280
[2025-06-05 05:27:10] 2025-06-05 03:18:10,822 | INFO     | ready for new job
[2025-06-05 05:27:10] 2025-06-05 03:18:10,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:27:10] 2025-06-05 03:18:10,828 | INFO     | **************************************
[2025-06-05 05:27:10] 2025-06-05 03:18:10,828 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:27:10] 2025-06-05 03:18:10,828 | INFO     | **************************************
[2025-06-05 05:27:10] 2025-06-05 03:18:10,828 | INFO     | 
[2025-06-05 05:27:10] 2025-06-05 03:18:10,829 | INFO     | pilot is running in a VM
[2025-06-05 05:27:10] 2025-06-05 03:18:10,829 | INFO     | architecture information:
[2025-06-05 05:27:10] 2025-06-05 03:18:10,841 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:27:10] 2025-06-05 03:18:11,303 | INFO     | cat /etc/os-release:
[2025-06-05 05:27:10] NAME="CentOS Linux"
[2025-06-05 05:27:10] VERSION="7 (Core)"
[2025-06-05 05:27:10] ID="centos"
[2025-06-05 05:27:10] ID_LIKE="rhel fedora"
[2025-06-05 05:27:10] VERSION_ID="7"
[2025-06-05 05:27:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:27:10] ANSI_COLOR="0;31"
[2025-06-05 05:27:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:27:10] HOME_URL="https://www.centos.org/"
[2025-06-05 05:27:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:27:10] 
[2025-06-05 05:27:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:27:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:27:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:27:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:27:10] 
[2025-06-05 05:27:10] 2025-06-05 03:18:11,304 | INFO     | **************************************
[2025-06-05 05:27:10] 2025-06-05 03:18:11,807 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-05 05:27:10] 2025-06-05 03:18:12,070 | INFO     | sufficient remaining disk space (497531486208 B)
[2025-06-05 05:27:10] 2025-06-05 03:18:12,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:27:10] 2025-06-05 03:18:12,071 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:27:10] 2025-06-05 03:18:12,071 | INFO     | update_server=False
[2025-06-05 05:27:10] 2025-06-05 03:18:12,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:27:10] 2025-06-05 03:18:12,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:27:10] 2025-06-05 03:18:12,072 | INFO     | aborting loop
[2025-06-05 05:27:10] 2025-06-05 03:18:12,075 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:27:10] 2025-06-05 03:18:12,075 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:27:10] 2025-06-05 03:18:12,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:27:10] 2025-06-05 03:18:12,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:27:10] 2025-06-05 03:18:12,127 | INFO     | all data control threads have been joined
[2025-06-05 05:27:10] 2025-06-05 03:18:12,252 | INFO     | all payload control threads have been joined
[2025-06-05 05:27:10] 2025-06-05 03:18:12,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:27:10] 2025-06-05 03:18:13,078 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:13,081 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:13,118 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:13,133 | INFO     | [data] control thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:13,157 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:13,174 | INFO     | all job control threads have been joined
[2025-06-05 05:27:10] 2025-06-05 03:18:13,258 | INFO     | [payload] control thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:13,406 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:13,542 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:13,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:27:10] 2025-06-05 03:18:13,946 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:13,992 | INFO     | [job] validate thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:14,180 | INFO     | [job] control thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:14,416 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:14,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:14,613 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:14,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:27:10] 2025-06-05 03:18:14,915 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:18,643 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:27:10] 2025-06-05 03:18:19,510 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140568213198656)>', '<ExcThread(monitor, started 140567602247424)>']
[2025-06-05 05:27:10] 2025-06-05 03:18:20,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:27:10] 2025-06-05 03:18:20,124 | INFO     | [monitor] control thread has ended
[2025-06-05 05:27:10] 2025-06-05 03:18:24,536 | INFO     | all workflow threads have been joined
[2025-06-05 05:27:10] 2025-06-05 03:18:24,536 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:27:10] 2025-06-05 03:18:24,537 | INFO     | traces error code: 0
[2025-06-05 05:27:10] 2025-06-05 03:18:24,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:27:10] 2025-06-05 03:18:24,974 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:27:10] 2025-06-05 03:18:25,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:27:10] 2025-06-05 03:18:25,125 [wrapper] pilotpid: 17606
[2025-06-05 05:27:10] 2025-06-05 03:18:25,234 [wrapper] Pilot exit status: 0
[2025-06-05 05:27:10] 2025-06-05 03:18:25,758 [wrapper] pandaids: 6679195585
[2025-06-05 05:27:10] 2025-06-05 03:18:26,611 [wrapper] cleanup supervisor_pilot  5680 17607
[2025-06-05 05:27:10] 2025-06-05 03:18:26,707 [wrapper] Test setup, not cleaning
[2025-06-05 05:27:10] 2025-06-05 03:18:26,811 [wrapper] apfmon messages muted
[2025-06-05 05:27:10] 2025-06-05 03:18:26,868 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:27:10] 2025-06-05 03:18:26,980 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:27:10]  *** Error codes and diagnostics ***
[2025-06-05 05:27:10]     "exeErrorCode": 0,
[2025-06-05 05:27:10]     "exeErrorDiag": "",
[2025-06-05 05:27:10]     "pilotErrorCode": 0,
[2025-06-05 05:27:10]     "pilotErrorDiag": "",
[2025-06-05 05:27:10]  *** Listing of results directory ***
[2025-06-05 05:27:10] total 389012
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 05:27:10] -rwx------. 1 boinc boinc     37140 Jun  4 10:54 runpilot2-wrapper.sh
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc      5111 Jun  4 10:54 queuedata.json
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc       100 Jun  5 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:27:10] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 01:20 run_atlas
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc       105 Jun  5 01:20 job.xml
[2025-06-05 05:27:10] -rw-r--r--. 2 boinc boinc 213644932 Jun  5 01:20 EVNT.45006593._001572.pool.root.1
[2025-06-05 05:27:10] -rw-r--r--. 2 boinc boinc    508888 Jun  5 01:20 input.tar.gz
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc      6392 Jun  5 01:20 init_data.xml
[2025-06-05 05:27:10] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:20 start_atlas.sh
[2025-06-05 05:27:10] drwxrwx--x. 2 boinc boinc        68 Jun  5 01:20 shared
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc         0 Jun  5 01:20 boinc_lockfile
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc      2525 Jun  5 01:21 pandaJob.out
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc    987117 Jun  5 01:24 agis_schedconf.cvmfs.json
[2025-06-05 05:27:10] drwx------. 4 boinc boinc      4096 Jun  5 01:24 pilot3
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc 177726794 Jun  5 05:15 HITS.45006595._055988.pool.root.1
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc       531 Jun  5 05:15 boinc_task_state.xml
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc      1013 Jun  5 05:16 memory_monitor_summary.json
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc   1598969 Jun  5 05:16 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc    389455 Jun  5 05:16 log.45006595._055988.job.log.tgz.1
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc        95 Jun  5 05:18 pilot_heartbeat.json
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc      7689 Jun  5 05:18 heartbeat.json
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc      4540 Jun  5 05:18 pilotlog.txt
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc   1189709 Jun  5 05:18 log.45006595._055988.job.log.1
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc       357 Jun  5 05:18 output.list
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:18 runtime_log
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc   1597440 Jun  5 05:18 result.tar.gz
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc       657 Jun  5 05:18 wiPODm63yg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmNzaKDmn0VcUn.diag
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc      8673 Jun  5 05:18 runtime_log.err
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc      8192 Jun  5 05:27 boinc_mmap_file
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc        28 Jun  5 05:27 wrapper_checkpoint.txt
[2025-06-05 05:27:10] -rw-r--r--. 1 boinc boinc     20501 Jun  5 05:27 stderr.txt
[2025-06-05 05:27:10] HITS file was successfully produced:
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc 177726794 Jun  5 05:15 shared/HITS.pool.root.1
[2025-06-05 05:27:10]  *** Contents of shared directory: ***
[2025-06-05 05:27:10] total 384280
[2025-06-05 05:27:10] -rw-r--r--. 2 boinc boinc 213644932 Jun  5 01:20 ATLAS.root_0
[2025-06-05 05:27:10] -rw-r--r--. 2 boinc boinc    508888 Jun  5 01:20 input.tar.gz
[2025-06-05 05:27:10] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:20 start_atlas.sh
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc 177726794 Jun  5 05:15 HITS.pool.root.1
[2025-06-05 05:27:10] -rw-------. 1 boinc boinc   1597440 Jun  5 05:18 result.tar.gz
05:27:12 (10295): run_atlas exited; CPU time 50148.692023
05:27:12 (10295): called boinc_finish(0)

</stderr_txt>
]]>

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