Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:29:46 (16874): wrapper (7.7.26015): starting
12:29:46 (16874): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 12:29:46] Arguments: --nthreads 12
[2025-06-04 12:29:46] Threads: 12
[2025-06-04 12:29:46] Checking for CVMFS
[2025-06-04 12:29:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:29:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:29:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:29:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:29:47] 2.10.0.0 29567 2811 114956 146789 1 186 15232215 16777216 879 130560 0 11451116 99.998 703207 7129 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-04 12:29:47] CVMFS is ok
[2025-06-04 12:29:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:29:47] Checking for apptainer binary...
[2025-06-04 12:29:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:29:47] Running /usr/bin/apptainer --version
[2025-06-04 12:29:47] apptainer version 1.3.6-150600.4.9.1
[2025-06-04 12:29:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:29:47] boinc-runner
[2025-06-04 12:29:47] apptainer works
[2025-06-04 12:29:47] Set ATHENA_PROC_NUMBER=12
[2025-06-04 12:29:47] Set ATHENA_CORE_NUMBER=12
[2025-06-04 12:29:47] Starting ATLAS job with PandaID=6679310801
[2025-06-04 12:29:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:58:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:58:27]  filetype=log
[2025-06-04 12:58:27]  guid=1bc1628e-9f93-4a34-91ab-735525bf7357
[2025-06-04 12:58:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:58:27]  is_altstaged=None
[2025-06-04 12:58:27]  is_tar=False
[2025-06-04 12:58:27]  lfn=log.45006595._056140.job.log.tgz.1
[2025-06-04 12:58:27]  mtime=0
[2025-06-04 12:58:27]  protocol_id=None
[2025-06-04 12:58:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:58:27]  replicas=None
[2025-06-04 12:58:27]  scope=mc23_13p6TeV
[2025-06-04 12:58:27]  status=None
[2025-06-04 12:58:27]  status_code=0
[2025-06-04 12:58:27]  storage_token=
[2025-06-04 12:58:27]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6679310801/log.45006595._056140.job.log.tgz.1
[2025-06-04 12:58:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/27/log.45006595._056140.job.log.tgz.1
[2025-06-04 12:58:27]  workdir=None
[2025-06-04 12:58:27] ]
[2025-06-04 12:58:27] 2025-06-04 17:58:11,995 | INFO     | transferring file log.45006595._056140.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6679310801/log.45006595._056140.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 12:58:27] 2025-06-04 17:58:11,995 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6679310801/log.45006595._056140.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._056140.job
[2025-06-04 12:58:27] 2025-06-04 17:58:12,002 | INFO     | adding to output.list: log.45006595._056140.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/27/log.45006595._056140.job.log.tg
[2025-06-04 12:58:27] 2025-06-04 17:58:12,003 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:58:27] 2025-06-04 17:58:12,003 | INFO     | summary of transferred files:
[2025-06-04 12:58:27] 2025-06-04 17:58:12,003 | INFO     |  -- lfn=log.45006595._056140.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:58:27] 2025-06-04 17:58:12,003 | INFO     | stage-out finished correctly
[2025-06-04 12:58:27] 2025-06-04 17:58:12,033 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:58:27] 2025-06-04 17:58:12,098 | INFO     | job 6679310801 has state=finished
[2025-06-04 12:58:27] 2025-06-04 17:58:12,099 | INFO     | preparing for final server update for job 6679310801 in state='finished'
[2025-06-04 12:58:27] 2025-06-04 17:58:12,099 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:58:27] 2025-06-04 17:58:12,099 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:58:27] 2025-06-04 17:58:12,099 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:58:27] 2025-06-04 17:58:12,099 | INFO     | job 6679310801 has finished - writing final server update
[2025-06-04 12:58:27] 2025-06-04 17:58:12,100 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:58:27] 2025-06-04 17:58:12,102 | INFO     | executing command: lscpu
[2025-06-04 12:58:27] 2025-06-04 17:58:12,122 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:58:27] 2025-06-04 17:58:14,217 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:58:27] 2025-06-04 17:58:14,217 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6679310801/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:58:27] 2025-06-04 17:58:14,217 | INFO     | extracted standard info from prmon json
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | INFO     | sum of square deviations: 2865170.0
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | INFO     | sum of deviations: 84786828.0
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | INFO     | mean x: 1749059127.0
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | INFO     | mean y: 2906381.4285714286
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | INFO     | -- intersect: -51755689221.19855
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | INFO     | intersect: -51755689221.19855
[2025-06-04 12:58:27] 2025-06-04 17:58:14,218 | INFO     | chi2: 1.5992148437595557e-05
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | -- intersect: -51755689221.19855
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | current memory leak: 29.59 B/s (using 21 data points, chi2=0.00)
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | ..............................
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | . Timing measurements:
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | . get job = 0 s
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | . initial setup = 2 s
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | . payload setup = 3 s
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | . stage-in = 0 s
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | . payload execution = 1678 s
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | . stage-out = 0 s
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | . log creation = 0 s
[2025-06-04 12:58:27] 2025-06-04 17:58:14,219 | INFO     | ..............................
[2025-06-04 12:58:27] 2025-06-04 17:58:14,248 | INFO     | 
[2025-06-04 12:58:27] 2025-06-04 17:58:14,248 | INFO     | job summary report
[2025-06-04 12:58:27] 2025-06-04 17:58:14,248 | INFO     | --------------------------------------------------
[2025-06-04 12:58:27] 2025-06-04 17:58:14,248 | INFO     | PanDA job id: 6679310801
[2025-06-04 12:58:27] 2025-06-04 17:58:14,248 | INFO     | task id: 45006595
[2025-06-04 12:58:27] 2025-06-04 17:58:14,248 | INFO     | errors: (none)
[2025-06-04 12:58:27] 2025-06-04 17:58:14,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:58:27] 2025-06-04 17:58:14,248 | INFO     | pilot state: finished 
[2025-06-04 12:58:27] 2025-06-04 17:58:14,248 | INFO     | transexitcode: 0
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | exeerrorcode: 0
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | exeerrordiag: 
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | exitcode: 0
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | exitmsg: OK
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | cpuconsumptiontime: 18196 s
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | nevents: 400
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | neventsw: 0
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | pid: 27782
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | pgrp: 27782
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | corecount: 12
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | event service: False
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | sizes: {0: 2397292, 2: 2397498, 11: 2397526, 1685: 2431282, 1687: 2431396}
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | --------------------------------------------------
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | 
[2025-06-04 12:58:27] 2025-06-04 17:58:14,249 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:58:27] 2025-06-04 17:58:14,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:58:27] 2025-06-04 17:58:14,263 | INFO     | job 6679310801 has completed (purged errors)
[2025-06-04 12:58:27] 2025-06-04 17:58:14,263 | INFO     | overall cleanup function is called
[2025-06-04 12:58:27] 2025-06-04 17:58:15,270 | INFO     | --- collectZombieJob: --- 10, [27782]
[2025-06-04 12:58:27] 2025-06-04 17:58:15,270 | INFO     | zombie collector waiting for pid 27782
[2025-06-04 12:58:27] 2025-06-04 17:58:15,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:58:27] 2025-06-04 17:58:15,270 | INFO     | collected zombie processes
[2025-06-04 12:58:27] 2025-06-04 17:58:15,270 | INFO     | will attempt to kill all subprocesses of pid=27782
[2025-06-04 12:58:27] 2025-06-04 17:58:15,315 | INFO     | process IDs to be killed: [27782] (in reverse order)
[2025-06-04 12:58:27] 2025-06-04 17:58:15,341 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:58:27] 2025-06-04 17:58:15,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:58:27] 2025-06-04 17:58:15,344 | INFO     | did not find any defunct processes belonging to 27782
[2025-06-04 12:58:27] 2025-06-04 17:58:15,345 | INFO     | did not find any defunct processes belonging to 27782
[2025-06-04 12:58:27] 2025-06-04 17:58:15,345 | INFO     | ready for new job
[2025-06-04 12:58:27] 2025-06-04 17:58:15,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:58:27] 2025-06-04 17:58:15,346 | INFO     | **************************************
[2025-06-04 12:58:27] 2025-06-04 17:58:15,347 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:58:27] 2025-06-04 17:58:15,347 | INFO     | **************************************
[2025-06-04 12:58:27] 2025-06-04 17:58:15,347 | INFO     | 
[2025-06-04 12:58:27] 2025-06-04 17:58:15,348 | INFO     | architecture information:
[2025-06-04 12:58:27] 2025-06-04 17:58:15,348 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:58:27] 2025-06-04 17:58:15,358 | INFO     | cat /etc/os-release:
[2025-06-04 12:58:27] NAME="CentOS Linux"
[2025-06-04 12:58:27] VERSION="7 (Core)"
[2025-06-04 12:58:27] ID="centos"
[2025-06-04 12:58:27] ID_LIKE="rhel fedora"
[2025-06-04 12:58:27] VERSION_ID="7"
[2025-06-04 12:58:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:58:27] ANSI_COLOR="0;31"
[2025-06-04 12:58:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:58:27] HOME_URL="https://www.centos.org/"
[2025-06-04 12:58:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:58:27] 
[2025-06-04 12:58:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:58:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:58:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:58:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:58:27] 
[2025-06-04 12:58:27] 2025-06-04 17:58:15,358 | INFO     | **************************************
[2025-06-04 12:58:27] 2025-06-04 17:58:15,861 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 12:58:27] 2025-06-04 17:58:15,877 | INFO     | sufficient remaining disk space (3892506001408 B)
[2025-06-04 12:58:27] 2025-06-04 17:58:15,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:58:27] 2025-06-04 17:58:15,877 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:58:27] 2025-06-04 17:58:15,877 | INFO     | update_server=False
[2025-06-04 12:58:27] 2025-06-04 17:58:15,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:58:27] 2025-06-04 17:58:15,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:58:27] 2025-06-04 17:58:15,877 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:58:27] 2025-06-04 17:58:16,042 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:58:27] 2025-06-04 17:58:16,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:58:27] 2025-06-04 17:58:16,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:58:27] 2025-06-04 17:58:16,688 | INFO     | all data control threads have been joined
[2025-06-04 12:58:27] 2025-06-04 17:58:16,882 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:16,883 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:16,931 | INFO     | all payload control threads have been joined
[2025-06-04 12:58:27] 2025-06-04 17:58:16,958 | INFO     | all job control threads have been joined
[2025-06-04 12:58:27] 2025-06-04 17:58:17,118 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:17,122 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:17,206 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:17,546 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:17,694 | INFO     | [data] control thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:17,750 | INFO     | [job] validate thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:17,882 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:17,936 | INFO     | [payload] control thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:17,963 | INFO     | [job] control thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:18,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:58:27] 2025-06-04 17:58:18,294 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:18,312 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:58:27] 2025-06-04 17:58:18,443 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:18,459 | WARNING  | process 27782 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:58:27] 2025-06-04 17:58:18,486 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:58:27] 2025-06-04 17:58:18,523 | INFO     | number of running child processes to parent process 27782: 1
[2025-06-04 12:58:27] 2025-06-04 17:58:18,523 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:58:27] 2025-06-04 17:58:18,523 | INFO     | aborting job monitoring since job object (job id=6679310801) has expired
[2025-06-04 12:58:27] 2025-06-04 17:58:18,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:58:27] 2025-06-04 17:58:18,523 | INFO     | will abort loop
[2025-06-04 12:58:27] 2025-06-04 17:58:19,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:19,526 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:22,066 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:58:27] 2025-06-04 17:58:22,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325555197760)>', '<ExcThread(monitor, started 140325205030656)>']
[2025-06-04 12:58:27] 2025-06-04 17:58:23,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:58:27] 2025-06-04 17:58:23,074 | INFO     | [monitor] control thread has ended
[2025-06-04 12:58:27] 2025-06-04 17:58:27,825 | INFO     | all workflow threads have been joined
[2025-06-04 12:58:27] 2025-06-04 17:58:27,825 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:58:27] 2025-06-04 17:58:27,826 | INFO     | traces error code: 0
[2025-06-04 12:58:27] 2025-06-04 17:58:27,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:58:27] 2025-06-04 17:58:27,873 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:58:27] 2025-06-04 17:58:27,878 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:58:27] 2025-06-04 17:58:27,879 [wrapper] pilotpid: 20723
[2025-06-04 12:58:27] 2025-06-04 17:58:27,881 [wrapper] Pilot exit status: 0
[2025-06-04 12:58:27] 2025-06-04 17:58:27,886 [wrapper] pandaids: 6679310801
[2025-06-04 12:58:27] 2025-06-04 17:58:27,900 [wrapper] cleanup supervisor_pilot 11320 20724
[2025-06-04 12:58:27] 2025-06-04 17:58:27,902 [wrapper] Test setup, not cleaning
[2025-06-04 12:58:27] 2025-06-04 17:58:27,903 [wrapper] apfmon messages muted
[2025-06-04 12:58:27] 2025-06-04 17:58:27,904 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:58:27] 2025-06-04 17:58:27,906 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:58:27]  *** Error codes and diagnostics ***
[2025-06-04 12:58:27]     "exeErrorCode": 0,
[2025-06-04 12:58:27]     "exeErrorDiag": "",
[2025-06-04 12:58:27]     "pilotErrorCode": 0,
[2025-06-04 12:58:27]     "pilotErrorDiag": "",
[2025-06-04 12:58:27]  *** Listing of results directory ***
[2025-06-04 12:58:27] total 380512
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc    495897 Jun  4 03:46 pilot3.tar.gz
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc      5111 Jun  4 03:56 queuedata.json
[2025-06-04 12:58:27] -rwx------ 1 boinc boinc     37140 Jun  4 03:57 runpilot2-wrapper.sh
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:58:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:29 run_atlas
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:29 job.xml
[2025-06-04 12:58:27] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:29 start_atlas.sh
[2025-06-04 12:58:27] drwxrwx--x 1 boinc boinc        76 Jun  4 12:29 shared
[2025-06-04 12:58:27] -rw-r--r-- 2 boinc boinc    508885 Jun  4 12:29 input.tar.gz
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc     10044 Jun  4 12:29 init_data.xml
[2025-06-04 12:58:27] -rw-r--r-- 2 boinc boinc 215337275 Jun  4 12:29 EVNT.45006593._001871.pool.root.1
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:29 boinc_lockfile
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc      2525 Jun  4 12:29 pandaJob.out
[2025-06-04 12:58:27] -rw------- 1 boinc boinc    990984 Jun  4 12:29 agis_schedconf.cvmfs.json
[2025-06-04 12:58:27] -rw------- 1 boinc boinc   1598969 Jun  4 12:29 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:58:27] drwx------ 1 boinc boinc       368 Jun  4 12:29 pilot3
[2025-06-04 12:58:27] -rw------- 1 boinc boinc 169431481 Jun  4 12:57 HITS.45006595._056140.pool.root.1
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc       529 Jun  4 12:57 boinc_task_state.xml
[2025-06-04 12:58:27] -rw------- 1 boinc boinc        95 Jun  4 12:58 pilot_heartbeat.json
[2025-06-04 12:58:27] -rw------- 1 boinc boinc      1021 Jun  4 12:58 memory_monitor_summary.json
[2025-06-04 12:58:27] -rw------- 1 boinc boinc    325278 Jun  4 12:58 log.45006595._056140.job.log.tgz.1
[2025-06-04 12:58:27] -rw------- 1 boinc boinc      7681 Jun  4 12:58 heartbeat.json
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:58 boinc_mmap_file
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc        27 Jun  4 12:58 wrapper_checkpoint.txt
[2025-06-04 12:58:27] -rw------- 1 boinc boinc      4944 Jun  4 12:58 pilotlog.txt
[2025-06-04 12:58:27] -rw------- 1 boinc boinc    202671 Jun  4 12:58 log.45006595._056140.job.log.1
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:58 runtime_log
[2025-06-04 12:58:27] -rw------- 1 boinc boinc    542720 Jun  4 12:58 result.tar.gz
[2025-06-04 12:58:27] -rw------- 1 boinc boinc       357 Jun  4 12:58 output.list
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc      8683 Jun  4 12:58 runtime_log.err
[2025-06-04 12:58:27] -rw------- 1 boinc boinc       651 Jun  4 12:58 0WSNDmU7yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4snKDmISgyQo.diag
[2025-06-04 12:58:27] -rw-r--r-- 1 boinc boinc     20814 Jun  4 12:58 stderr.txt
[2025-06-04 12:58:27] HITS file was successfully produced:
[2025-06-04 12:58:27] -rw------- 1 boinc boinc 169431481 Jun  4 12:57 shared/HITS.pool.root.1
[2025-06-04 12:58:27]  *** Contents of shared directory: ***
[2025-06-04 12:58:27] total 376804
[2025-06-04 12:58:27] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:29 start_atlas.sh
[2025-06-04 12:58:27] -rw-r--r-- 2 boinc boinc    508885 Jun  4 12:29 input.tar.gz
[2025-06-04 12:58:27] -rw-r--r-- 2 boinc boinc 215337275 Jun  4 12:29 ATLAS.root_0
[2025-06-04 12:58:27] -rw------- 1 boinc boinc 169431481 Jun  4 12:57 HITS.pool.root.1
[2025-06-04 12:58:27] -rw------- 1 boinc boinc    542720 Jun  4 12:58 result.tar.gz
12:58:29 (16874): run_atlas exited; CPU time 18203.658327
12:58:29 (16874): called boinc_finish(0)

</stderr_txt>
]]>

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