Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:07:35 (2679765): wrapper (7.7.26015): starting
10:07:35 (2679765): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 10:07:35] Arguments: --nthreads 12
[2025-06-04 10:07:35] Threads: 12
[2025-06-04 10:07:35] Checking for CVMFS
[2025-06-04 10:07:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:07:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:07:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:07:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:07:36] 2.12.6.0 32194 915 113192 146781 1 76 25898831 32935936 8591 16776704 0 5129745 99.739 2666144 38336 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:07:36] CVMFS is ok
[2025-06-04 10:07:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:07:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:07:36] Further information can be found at the LHC@home message board.
[2025-06-04 10:07:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:07:36] Checking for apptainer binary...
[2025-06-04 10:07:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:07:36] Running /usr/bin/apptainer --version
[2025-06-04 10:07:36] apptainer version 1.4.1-1.el9
[2025-06-04 10:07:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:07:36] c6-1-24-4.aglt2.org
[2025-06-04 10:07:36] apptainer works
[2025-06-04 10:07:36] Set ATHENA_PROC_NUMBER=12
[2025-06-04 10:07:36] Set ATHENA_CORE_NUMBER=12
[2025-06-04 10:07:36] Starting ATLAS job with PandaID=6679230563
[2025-06-04 10:07:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:02:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:02:07]  protocol_id=None
[2025-06-04 11:02:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:02:07]  replicas=None
[2025-06-04 11:02:07]  scope=mc23_13p6TeV
[2025-06-04 11:02:07]  status=None
[2025-06-04 11:02:07]  status_code=0
[2025-06-04 11:02:07]  storage_token=
[2025-06-04 11:02:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679230563/log.45006595._056027.job.log.tgz.1
[2025-06-04 11:02:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/dd/log.45006595._056027.job.log.tgz.1
[2025-06-04 11:02:07]  workdir=None
[2025-06-04 11:02:07] ]
[2025-06-04 11:02:07] 2025-06-04 15:01:45,076 | INFO     | transferring file log.45006595._056027.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679230563/log.45006595._056027.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:02:07] 2025-06-04 15:01:45,076 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679230563/log.45006595._056027.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056027.job
[2025-06-04 11:02:07] 2025-06-04 15:01:45,094 | INFO     | adding to output.list: log.45006595._056027.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/dd/log.45006595._056027.job.log.tg
[2025-06-04 11:02:07] 2025-06-04 15:01:45,096 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:02:07] 2025-06-04 15:01:45,096 | INFO     | summary of transferred files:
[2025-06-04 11:02:07] 2025-06-04 15:01:45,096 | INFO     |  -- lfn=log.45006595._056027.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:02:07] 2025-06-04 15:01:45,096 | INFO     | stage-out finished correctly
[2025-06-04 11:02:07] 2025-06-04 15:01:45,384 | INFO     | monitor loop #244: job 0:6679230563 is in state 'finished'
[2025-06-04 11:02:07] 2025-06-04 15:01:45,385 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:02:07] 2025-06-04 15:01:46,527 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:02:07] 2025-06-04 15:01:47,887 | INFO     | monitor loop #245: job 0:6679230563 is in state 'finished'
[2025-06-04 11:02:07] 2025-06-04 15:01:47,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:02:07] 2025-06-04 15:01:49,169 | INFO     | PID=2684036 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 11:02:07] 2025-06-04 15:01:49,170 | INFO     | .. there are 8 such processes running
[2025-06-04 11:02:07] 2025-06-04 15:01:49,594 | INFO     | job 6679230563 has state=finished
[2025-06-04 11:02:07] 2025-06-04 15:01:49,594 | INFO     | preparing for final server update for job 6679230563 in state='finished'
[2025-06-04 11:02:07] 2025-06-04 15:01:49,595 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:02:07] 2025-06-04 15:01:49,595 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:02:07] 2025-06-04 15:01:49,595 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:02:07] 2025-06-04 15:01:49,595 | INFO     | job 6679230563 has finished - writing final server update
[2025-06-04 11:02:07] 2025-06-04 15:01:49,595 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:02:07] 2025-06-04 15:01:49,611 | INFO     | executing command: lscpu
[2025-06-04 11:02:07] 2025-06-04 15:01:49,680 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:02:07] 2025-06-04 15:01:50,390 | INFO     | monitor loop #246: job 0:6679230563 is in state 'finished'
[2025-06-04 11:02:07] 2025-06-04 15:01:50,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:02:07] 2025-06-04 15:01:52,894 | INFO     | monitor loop #247: job 0:6679230563 is in state 'finished'
[2025-06-04 11:02:07] 2025-06-04 15:01:52,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:02:07] 2025-06-04 15:01:53,280 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:02:07] 2025-06-04 15:01:53,281 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679230563/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:02:07] 2025-06-04 15:01:53,281 | INFO     | extracted standard info from prmon json
[2025-06-04 11:02:07] 2025-06-04 15:01:53,282 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:02:07] 2025-06-04 15:01:53,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:02:07] 2025-06-04 15:01:53,282 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:02:07] 2025-06-04 15:01:53,282 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:02:07] 2025-06-04 15:01:53,284 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:02:07] 2025-06-04 15:01:53,284 | INFO     | sum of square deviations: 30168007.5
[2025-06-04 11:02:07] 2025-06-04 15:01:53,284 | INFO     | sum of deviations: 1100632607.5000005
[2025-06-04 11:02:07] 2025-06-04 15:01:53,284 | INFO     | mean x: 1749047767.5
[2025-06-04 11:02:07] 2025-06-04 15:01:53,284 | INFO     | mean y: 2458624.7608695654
[2025-06-04 11:02:07] 2025-06-04 15:01:53,284 | INFO     | -- intersect: -63808815785.24382
[2025-06-04 11:02:07] 2025-06-04 15:01:53,284 | INFO     | intersect: -63808815785.24382
[2025-06-04 11:02:07] 2025-06-04 15:01:53,284 | INFO     | chi2: 1.0489368093206968
[2025-06-04 11:02:07] 2025-06-04 15:01:53,285 | INFO     | -- intersect: -63808815785.24382
[2025-06-04 11:02:07] 2025-06-04 15:01:53,285 | INFO     | current memory leak: 36.48 B/s (using 46 data points, chi2=1.05)
[2025-06-04 11:02:07] 2025-06-04 15:01:53,285 | INFO     | ..............................
[2025-06-04 11:02:07] 2025-06-04 15:01:53,285 | INFO     | . Timing measurements:
[2025-06-04 11:02:07] 2025-06-04 15:01:53,285 | INFO     | . get job = 0 s
[2025-06-04 11:02:07] 2025-06-04 15:01:53,285 | INFO     | . initial setup = 2 s
[2025-06-04 11:02:07] 2025-06-04 15:01:53,285 | INFO     | . payload setup = 5 s
[2025-06-04 11:02:07] 2025-06-04 15:01:53,285 | INFO     | . stage-in = 0 s
[2025-06-04 11:02:07] 2025-06-04 15:01:53,285 | INFO     | . payload execution = 3214 s
[2025-06-04 11:02:07] 2025-06-04 15:01:53,286 | INFO     | . stage-out = 0 s
[2025-06-04 11:02:07] 2025-06-04 15:01:53,286 | INFO     | . log creation = 0 s
[2025-06-04 11:02:07] 2025-06-04 15:01:53,286 | INFO     | ..............................
[2025-06-04 11:02:07] 2025-06-04 15:01:53,378 | INFO     | 
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | job summary report
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | --------------------------------------------------
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | PanDA job id: 6679230563
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | task id: 45006595
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | errors: (none)
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | pilot state: finished 
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | transexitcode: 0
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | exeerrorcode: 0
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | exeerrordiag: 
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | exitcode: 0
[2025-06-04 11:02:07] 2025-06-04 15:01:53,379 | INFO     | exitmsg: OK
[2025-06-04 11:02:07] 2025-06-04 15:01:53,380 | INFO     | cpuconsumptiontime: 30759 s
[2025-06-04 11:02:07] 2025-06-04 15:01:53,380 | INFO     | nevents: 400
[2025-06-04 11:02:07] 2025-06-04 15:01:53,380 | INFO     | neventsw: 0
[2025-06-04 11:02:07] 2025-06-04 15:01:53,380 | INFO     | pid: 2691503
[2025-06-04 11:02:07] 2025-06-04 15:01:53,380 | INFO     | pgrp: 2691503
[2025-06-04 11:02:07] 2025-06-04 15:01:53,380 | INFO     | corecount: 12
[2025-06-04 11:02:07] 2025-06-04 15:01:53,380 | INFO     | event service: False
[2025-06-04 11:02:07] 2025-06-04 15:01:53,380 | INFO     | sizes: {0: 2397291, 3: 2397497, 11: 2397525, 3224: 2422919, 3225: 2431860, 3227: 2431916, 3233: 2432214}
[2025-06-04 11:02:07] 2025-06-04 15:01:53,380 | INFO     | --------------------------------------------------
[2025-06-04 11:02:07] 2025-06-04 15:01:53,380 | INFO     | 
[2025-06-04 11:02:07] 2025-06-04 15:01:53,380 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:02:07] 2025-06-04 15:01:53,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,400 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:02:07] 2025-06-04 15:01:53,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,401 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:02:07] 2025-06-04 15:01:53,401 | INFO     | job 6679230563 has completed (purged errors)
[2025-06-04 11:02:07] 2025-06-04 15:01:53,401 | INFO     | overall cleanup function is called
[2025-06-04 11:02:07] 2025-06-04 15:01:54,409 | INFO     | --- collectZombieJob: --- 10, [2691503]
[2025-06-04 11:02:07] 2025-06-04 15:01:54,409 | INFO     | zombie collector waiting for pid 2691503
[2025-06-04 11:02:07] 2025-06-04 15:01:54,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:02:07] 2025-06-04 15:01:54,410 | INFO     | collected zombie processes
[2025-06-04 11:02:07] 2025-06-04 15:01:54,410 | INFO     | will attempt to kill all subprocesses of pid=2691503
[2025-06-04 11:02:07] 2025-06-04 15:01:54,603 | INFO     | process IDs to be killed: [2691503] (in reverse order)
[2025-06-04 11:02:07] 2025-06-04 15:01:54,678 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:02:07] 2025-06-04 15:01:54,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:02:07] 2025-06-04 15:01:54,690 | INFO     | did not find any defunct processes belonging to 2691503
[2025-06-04 11:02:07] 2025-06-04 15:01:54,701 | INFO     | did not find any defunct processes belonging to 2691503
[2025-06-04 11:02:07] 2025-06-04 15:01:54,701 | INFO     | ready for new job
[2025-06-04 11:02:07] 2025-06-04 15:01:54,701 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:02:07] 2025-06-04 15:01:54,703 | INFO     | **************************************
[2025-06-04 11:02:07] 2025-06-04 15:01:54,704 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:02:07] 2025-06-04 15:01:54,704 | INFO     | **************************************
[2025-06-04 11:02:07] 2025-06-04 15:01:54,704 | INFO     | 
[2025-06-04 11:02:07] 2025-06-04 15:01:54,719 | INFO     | architecture information:
[2025-06-04 11:02:07] 2025-06-04 15:01:54,720 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:02:07] 2025-06-04 15:01:54,734 | INFO     | cat /etc/os-release:
[2025-06-04 11:02:07] NAME="CentOS Linux"
[2025-06-04 11:02:07] VERSION="7 (Core)"
[2025-06-04 11:02:07] ID="centos"
[2025-06-04 11:02:07] ID_LIKE="rhel fedora"
[2025-06-04 11:02:07] VERSION_ID="7"
[2025-06-04 11:02:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:02:07] ANSI_COLOR="0;31"
[2025-06-04 11:02:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:02:07] HOME_URL="https://www.centos.org/"
[2025-06-04 11:02:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:02:07] 
[2025-06-04 11:02:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:02:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:02:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:02:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:02:07] 
[2025-06-04 11:02:07] 2025-06-04 15:01:54,735 | INFO     | **************************************
[2025-06-04 11:02:07] 2025-06-04 15:01:55,236 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:02:07] 2025-06-04 15:01:55,253 | INFO     | sufficient remaining disk space (76302778368 B)
[2025-06-04 11:02:07] 2025-06-04 15:01:55,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:02:07] 2025-06-04 15:01:55,253 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:02:07] 2025-06-04 15:01:55,253 | INFO     | update_server=False
[2025-06-04 11:02:07] 2025-06-04 15:01:55,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:02:07] 2025-06-04 15:01:55,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:02:07] 2025-06-04 15:01:55,254 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:02:07] 2025-06-04 15:01:55,255 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:02:07] 2025-06-04 15:01:55,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:02:07] 2025-06-04 15:01:55,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:02:07] 2025-06-04 15:01:55,397 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:02:07] 2025-06-04 15:01:55,397 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:02:07] 2025-06-04 15:01:55,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:02:07] 2025-06-04 15:01:55,398 | INFO     | will abort loop
[2025-06-04 11:02:07] 2025-06-04 15:01:55,402 | INFO     | all payload control threads have been joined
[2025-06-04 11:02:07] 2025-06-04 15:01:55,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:02:07] 2025-06-04 15:01:56,259 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:56,260 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:56,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:56,352 | INFO     | all data control threads have been joined
[2025-06-04 11:02:07] 2025-06-04 15:01:56,402 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:56,407 | INFO     | [payload] control thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:56,408 | INFO     | [job] validate thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:56,500 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:56,601 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:56,802 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:56,901 | INFO     | all job control threads have been joined
[2025-06-04 11:02:07] 2025-06-04 15:01:57,047 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:57,105 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:57,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:02:07] 2025-06-04 15:01:57,357 | INFO     | [data] control thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:57,419 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:57,713 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:01:57,906 | INFO     | [job] control thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:02:01,125 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:02:07] 2025-06-04 15:02:02,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140294458730304)>', '<ExcThread(monitor, started 140293689042688)>']
[2025-06-04 11:02:07] 2025-06-04 15:02:03,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:02:07] 2025-06-04 15:02:03,291 | INFO     | [monitor] control thread has ended
[2025-06-04 11:02:07] 2025-06-04 15:02:07,544 | INFO     | all workflow threads have been joined
[2025-06-04 11:02:07] 2025-06-04 15:02:07,544 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:02:07] 2025-06-04 15:02:07,545 | INFO     | traces error code: 0
[2025-06-04 11:02:07] 2025-06-04 15:02:07,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:02:07] 2025-06-04 15:02:07,722 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:02:07] 2025-06-04 15:02:07,724 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:02:07] 2025-06-04 15:02:07,726 [wrapper] pilotpid: 2684036
[2025-06-04 11:02:07] 2025-06-04 15:02:07,729 [wrapper] Pilot exit status: 0
[2025-06-04 11:02:07] 2025-06-04 15:02:07,739 [wrapper] pandaids: 6679230563
[2025-06-04 11:02:07] 2025-06-04 15:02:07,790 [wrapper] cleanup supervisor_pilot 2784871 2684037
[2025-06-04 11:02:07] 2025-06-04 15:02:07,793 [wrapper] Test setup, not cleaning
[2025-06-04 11:02:07] 2025-06-04 15:02:07,796 [wrapper] apfmon messages muted
[2025-06-04 11:02:07] 2025-06-04 15:02:07,798 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:02:07] 2025-06-04 15:02:07,801 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:02:07]  *** Error codes and diagnostics ***
[2025-06-04 11:02:07]     "exeErrorCode": 0,
[2025-06-04 11:02:07]     "exeErrorDiag": "",
[2025-06-04 11:02:07]     "pilotErrorCode": 0,
[2025-06-04 11:02:07]     "pilotErrorDiag": "",
[2025-06-04 11:02:07]  *** Listing of results directory ***
[2025-06-04 11:02:07] total 388508
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:54 queuedata.json
[2025-06-04 11:02:07] -rwx------. 1 boincer umatlas     37140 Jun  4 04:55 runpilot2-wrapper.sh
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:02:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:07 run_atlas
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:07 job.xml
[2025-06-04 11:02:07] -rw-r--r--. 2 boincer umatlas 213103114 Jun  4 10:07 EVNT.45006593._001551.pool.root.1
[2025-06-04 11:02:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:07 start_atlas.sh
[2025-06-04 11:02:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:07 shared
[2025-06-04 11:02:07] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 10:07 input.tar.gz
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:07 boinc_lockfile
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 10:07 pandaJob.out
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas    986819 Jun  4 10:07 agis_schedconf.cvmfs.json
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:07 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:02:07] drwx------. 4 boincer umatlas      4096 Jun  4 10:07 pilot3
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas 179542880 Jun  4 11:01 HITS.45006595._056027.pool.root.1
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 11:01 init_data.xml
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:01 boinc_task_state.xml
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas        95 Jun  4 11:01 pilot_heartbeat.json
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas      1036 Jun  4 11:01 memory_monitor_summary.json
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas    342224 Jun  4 11:01 log.45006595._056027.job.log.tgz.1
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas      7717 Jun  4 11:01 heartbeat.json
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:02 boinc_mmap_file
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:02 wrapper_checkpoint.txt
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas      4662 Jun  4 11:02 pilotlog.txt
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas    339347 Jun  4 11:02 log.45006595._056027.job.log.1
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas       357 Jun  4 11:02 output.list
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:02 runtime_log
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas    696320 Jun  4 11:02 result.tar.gz
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas       652 Jun  4 11:02 WlaMDm54yg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0zaKDmqTm38m.diag
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 11:02 runtime_log.err
[2025-06-04 11:02:07] -rw-r--r--. 1 boincer umatlas     21832 Jun  4 11:02 stderr.txt
[2025-06-04 11:02:07] HITS file was successfully produced:
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas 179542880 Jun  4 11:01 shared/HITS.pool.root.1
[2025-06-04 11:02:07]  *** Contents of shared directory: ***
[2025-06-04 11:02:07] total 384648
[2025-06-04 11:02:07] -rw-r--r--. 2 boincer umatlas 213103114 Jun  4 10:07 ATLAS.root_0
[2025-06-04 11:02:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:07 start_atlas.sh
[2025-06-04 11:02:07] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 10:07 input.tar.gz
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas 179542880 Jun  4 11:01 HITS.pool.root.1
[2025-06-04 11:02:07] -rw-------. 1 boincer umatlas    696320 Jun  4 11:02 result.tar.gz
11:02:08 (2679765): run_atlas exited; CPU time 30814.784519
11:02:08 (2679765): called boinc_finish(0)

</stderr_txt>
]]>

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