Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:04:41 (1719132): wrapper (7.7.26015): starting
09:04:41 (1719132): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:04:41] Arguments: --nthreads 8
[2025-06-04 09:04:41] Threads: 8
[2025-06-04 09:04:41] Checking for CVMFS
[2025-06-04 09:04:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:04:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:04:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:04:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:04:41] 2.12.6.0 7662 1374 222244 146780 3 720 16995442 32935936 25474 16776704 0 20313732 99.762 9658501 25036 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:04:41] CVMFS is ok
[2025-06-04 09:04:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:04:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:04:41] Further information can be found at the LHC@home message board.
[2025-06-04 09:04:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:04:41] Checking for apptainer binary...
[2025-06-04 09:04:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:04:41] Running /usr/bin/apptainer --version
[2025-06-04 09:04:41] apptainer version 1.4.1-1.el9
[2025-06-04 09:04:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:04:41] c7-3-29.aglt2.org
[2025-06-04 09:04:41] apptainer works
[2025-06-04 09:04:41] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:04:41] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:04:42] Starting ATLAS job with PandaID=6679100204
[2025-06-04 09:04:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:11:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:11:33]  is_altstaged=None
[2025-06-04 10:11:33]  is_tar=False
[2025-06-04 10:11:33]  lfn=log.45006595._055840.job.log.tgz.1
[2025-06-04 10:11:33]  mtime=0
[2025-06-04 10:11:33]  protocol_id=None
[2025-06-04 10:11:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:11:33]  replicas=None
[2025-06-04 10:11:33]  scope=mc23_13p6TeV
[2025-06-04 10:11:33]  status=None
[2025-06-04 10:11:33]  status_code=0
[2025-06-04 10:11:33]  storage_token=
[2025-06-04 10:11:33]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6679100204/log.45006595._055840.job.log.tgz.1
[2025-06-04 10:11:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/5e/log.45006595._055840.job.log.tgz.1
[2025-06-04 10:11:33]  workdir=None
[2025-06-04 10:11:33] ]
[2025-06-04 10:11:33] 2025-06-04 14:11:05,226 | INFO     | transferring file log.45006595._055840.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6679100204/log.45006595._055840.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:11:33] 2025-06-04 14:11:05,227 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6679100204/log.45006595._055840.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._055840.job
[2025-06-04 10:11:33] 2025-06-04 14:11:05,248 | INFO     | adding to output.list: log.45006595._055840.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/5e/log.45006595._055840.job.log.tg
[2025-06-04 10:11:33] 2025-06-04 14:11:05,249 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:11:33] 2025-06-04 14:11:05,249 | INFO     | summary of transferred files:
[2025-06-04 10:11:33] 2025-06-04 14:11:05,249 | INFO     |  -- lfn=log.45006595._055840.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:11:33] 2025-06-04 14:11:05,250 | INFO     | stage-out finished correctly
[2025-06-04 10:11:33] 2025-06-04 14:11:05,412 | INFO     | number of running child processes to parent process 1730487: 1
[2025-06-04 10:11:33] 2025-06-04 14:11:05,413 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:11:33] 2025-06-04 14:11:07,712 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:11:33] 2025-06-04 14:11:07,915 | INFO     | monitor loop #290: job 0:6679100204 is in state 'finished'
[2025-06-04 10:11:33] 2025-06-04 14:11:07,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:11:33] 2025-06-04 14:11:09,481 | INFO     | job 6679100204 has state=finished
[2025-06-04 10:11:33] 2025-06-04 14:11:09,481 | INFO     | preparing for final server update for job 6679100204 in state='finished'
[2025-06-04 10:11:33] 2025-06-04 14:11:09,482 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:11:33] 2025-06-04 14:11:09,482 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:11:33] 2025-06-04 14:11:09,482 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:11:33] 2025-06-04 14:11:09,482 | INFO     | job 6679100204 has finished - writing final server update
[2025-06-04 10:11:33] 2025-06-04 14:11:09,482 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:11:33] 2025-06-04 14:11:09,500 | INFO     | executing command: lscpu
[2025-06-04 10:11:33] 2025-06-04 14:11:09,578 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:11:33] 2025-06-04 14:11:10,418 | INFO     | monitor loop #291: job 0:6679100204 is in state 'finished'
[2025-06-04 10:11:33] 2025-06-04 14:11:10,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:11:33] 2025-06-04 14:11:12,922 | INFO     | monitor loop #292: job 0:6679100204 is in state 'finished'
[2025-06-04 10:11:33] 2025-06-04 14:11:12,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:11:33] 2025-06-04 14:11:13,879 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:11:33] 2025-06-04 14:11:13,880 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679100204/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:11:33] 2025-06-04 14:11:13,880 | INFO     | extracted standard info from prmon json
[2025-06-04 10:11:33] 2025-06-04 14:11:13,881 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:11:33] 2025-06-04 14:11:13,881 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:11:33] 2025-06-04 14:11:13,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:11:33] 2025-06-04 14:11:13,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:11:33] 2025-06-04 14:11:13,882 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:11:33] 2025-06-04 14:11:13,883 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 10:11:33] 2025-06-04 14:11:13,883 | INFO     | sum of deviations: 7175863740.499999
[2025-06-04 10:11:33] 2025-06-04 14:11:13,883 | INFO     | mean x: 1749044362.5
[2025-06-04 10:11:33] 2025-06-04 14:11:13,883 | INFO     | mean y: 2119039.3620689656
[2025-06-04 10:11:33] 2025-06-04 14:11:13,883 | INFO     | -- intersect: -207509167813.1711
[2025-06-04 10:11:33] 2025-06-04 14:11:13,883 | INFO     | intersect: -207509167813.1711
[2025-06-04 10:11:33] 2025-06-04 14:11:13,883 | INFO     | chi2: 0.6903065259310963
[2025-06-04 10:11:33] 2025-06-04 14:11:13,883 | INFO     | -- intersect: -207509167813.1711
[2025-06-04 10:11:33] 2025-06-04 14:11:13,884 | INFO     | current memory leak: 118.64 B/s (using 58 data points, chi2=0.69)
[2025-06-04 10:11:33] 2025-06-04 14:11:13,884 | INFO     | ..............................
[2025-06-04 10:11:33] 2025-06-04 14:11:13,884 | INFO     | . Timing measurements:
[2025-06-04 10:11:33] 2025-06-04 14:11:13,884 | INFO     | . get job = 0 s
[2025-06-04 10:11:33] 2025-06-04 14:11:13,884 | INFO     | . initial setup = 2 s
[2025-06-04 10:11:33] 2025-06-04 14:11:13,884 | INFO     | . payload setup = 6 s
[2025-06-04 10:11:33] 2025-06-04 14:11:13,884 | INFO     | . stage-in = 0 s
[2025-06-04 10:11:33] 2025-06-04 14:11:13,884 | INFO     | . payload execution = 3947 s
[2025-06-04 10:11:33] 2025-06-04 14:11:13,884 | INFO     | . stage-out = 0 s
[2025-06-04 10:11:33] 2025-06-04 14:11:13,884 | INFO     | . log creation = 0 s
[2025-06-04 10:11:33] 2025-06-04 14:11:13,884 | INFO     | ..............................
[2025-06-04 10:11:33] 2025-06-04 14:11:14,137 | INFO     | 
[2025-06-04 10:11:33] 2025-06-04 14:11:14,137 | INFO     | job summary report
[2025-06-04 10:11:33] 2025-06-04 14:11:14,137 | INFO     | --------------------------------------------------
[2025-06-04 10:11:33] 2025-06-04 14:11:14,137 | INFO     | PanDA job id: 6679100204
[2025-06-04 10:11:33] 2025-06-04 14:11:14,137 | INFO     | task id: 45006595
[2025-06-04 10:11:33] 2025-06-04 14:11:14,137 | INFO     | errors: (none)
[2025-06-04 10:11:33] 2025-06-04 14:11:14,137 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | pilot state: finished 
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | transexitcode: 0
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | exeerrorcode: 0
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | exeerrordiag: 
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | exitcode: 0
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | exitmsg: OK
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | cpuconsumptiontime: 26229 s
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | nevents: 400
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | neventsw: 0
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | pid: 1730487
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | pgrp: 1730487
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | corecount: 8
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | event service: False
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | sizes: {0: 2397292, 4: 2397498, 11: 2397526, 3957: 2423322, 3958: 2432263, 3961: 2432319, 3967: 2432617}
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | --------------------------------------------------
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | 
[2025-06-04 10:11:33] 2025-06-04 14:11:14,138 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:11:33] 2025-06-04 14:11:14,163 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,163 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,163 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,163 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:11:33] 2025-06-04 14:11:14,164 | INFO     | job 6679100204 has completed (purged errors)
[2025-06-04 10:11:33] 2025-06-04 14:11:14,165 | INFO     | overall cleanup function is called
[2025-06-04 10:11:33] 2025-06-04 14:11:15,172 | INFO     | --- collectZombieJob: --- 10, [1730487]
[2025-06-04 10:11:33] 2025-06-04 14:11:15,172 | INFO     | zombie collector waiting for pid 1730487
[2025-06-04 10:11:33] 2025-06-04 14:11:15,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:11:33] 2025-06-04 14:11:15,172 | INFO     | collected zombie processes
[2025-06-04 10:11:33] 2025-06-04 14:11:15,172 | INFO     | will attempt to kill all subprocesses of pid=1730487
[2025-06-04 10:11:33] 2025-06-04 14:11:15,612 | INFO     | process IDs to be killed: [1730487] (in reverse order)
[2025-06-04 10:11:33] 2025-06-04 14:11:15,758 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:11:33] 2025-06-04 14:11:15,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:11:33] 2025-06-04 14:11:15,781 | INFO     | did not find any defunct processes belonging to 1730487
[2025-06-04 10:11:33] 2025-06-04 14:11:15,799 | INFO     | did not find any defunct processes belonging to 1730487
[2025-06-04 10:11:33] 2025-06-04 14:11:15,799 | INFO     | ready for new job
[2025-06-04 10:11:33] 2025-06-04 14:11:15,799 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:11:33] 2025-06-04 14:11:15,800 | INFO     | **************************************
[2025-06-04 10:11:33] 2025-06-04 14:11:15,801 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:11:33] 2025-06-04 14:11:15,801 | INFO     | **************************************
[2025-06-04 10:11:33] 2025-06-04 14:11:15,801 | INFO     | 
[2025-06-04 10:11:33] 2025-06-04 14:11:15,818 | INFO     | architecture information:
[2025-06-04 10:11:33] 2025-06-04 14:11:15,819 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:11:33] 2025-06-04 14:11:15,833 | INFO     | cat /etc/os-release:
[2025-06-04 10:11:33] NAME="CentOS Linux"
[2025-06-04 10:11:33] VERSION="7 (Core)"
[2025-06-04 10:11:33] ID="centos"
[2025-06-04 10:11:33] ID_LIKE="rhel fedora"
[2025-06-04 10:11:33] VERSION_ID="7"
[2025-06-04 10:11:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:11:33] ANSI_COLOR="0;31"
[2025-06-04 10:11:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:11:33] HOME_URL="https://www.centos.org/"
[2025-06-04 10:11:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:11:33] 
[2025-06-04 10:11:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:11:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:11:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:11:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:11:33] 
[2025-06-04 10:11:33] 2025-06-04 14:11:15,833 | INFO     | **************************************
[2025-06-04 10:11:33] 2025-06-04 14:11:16,334 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:11:33] 2025-06-04 14:11:16,351 | INFO     | sufficient remaining disk space (75548852224 B)
[2025-06-04 10:11:33] 2025-06-04 14:11:16,351 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:11:33] 2025-06-04 14:11:16,352 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:11:33] 2025-06-04 14:11:16,352 | INFO     | update_server=False
[2025-06-04 10:11:33] 2025-06-04 14:11:16,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:11:33] 2025-06-04 14:11:16,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:11:33] 2025-06-04 14:11:16,381 | INFO     | all payload control threads have been joined
[2025-06-04 10:11:33] 2025-06-04 14:11:16,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:11:33] 2025-06-04 14:11:16,434 | INFO     | aborting loop
[2025-06-04 10:11:33] 2025-06-04 14:11:16,481 | INFO     | all data control threads have been joined
[2025-06-04 10:11:33] 2025-06-04 14:11:16,670 | INFO     | all job control threads have been joined
[2025-06-04 10:11:33] 2025-06-04 14:11:17,306 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:11:33] 2025-06-04 14:11:17,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:11:33] 2025-06-04 14:11:17,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:11:33] 2025-06-04 14:11:17,357 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:17,386 | INFO     | [payload] control thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:17,405 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:17,439 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:17,486 | INFO     | [data] control thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:17,672 | INFO     | [job] control thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:18,248 | INFO     | [job] validate thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:18,255 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:18,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:11:33] 2025-06-04 14:11:18,357 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:18,358 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:18,390 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:18,435 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:18,624 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:18,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:11:33] 2025-06-04 14:11:19,956 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:22,277 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:26,457 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:11:33] 2025-06-04 14:11:27,460 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:11:33] 2025-06-04 14:11:28,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140085736654656)>', '<ExcThread(monitor, started 140085240518400)>']
[2025-06-04 10:11:33] 2025-06-04 14:11:29,360 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:11:33] 2025-06-04 14:11:29,360 | INFO     | [monitor] control thread has ended
[2025-06-04 10:11:33] 2025-06-04 14:11:33,546 | INFO     | all workflow threads have been joined
[2025-06-04 10:11:33] 2025-06-04 14:11:33,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:11:33] 2025-06-04 14:11:33,546 | INFO     | traces error code: 0
[2025-06-04 10:11:33] 2025-06-04 14:11:33,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:11:33] 2025-06-04 14:11:33,668 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:11:33] 2025-06-04 14:11:33,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:11:33] 2025-06-04 14:11:33,674 [wrapper] pilotpid: 1723493
[2025-06-04 10:11:33] 2025-06-04 14:11:33,678 [wrapper] Pilot exit status: 0
[2025-06-04 10:11:33] 2025-06-04 14:11:33,693 [wrapper] pandaids: 6679100204
[2025-06-04 10:11:33] 2025-06-04 14:11:33,796 [wrapper] cleanup supervisor_pilot 2018218 1723494
[2025-06-04 10:11:33] 2025-06-04 14:11:33,800 [wrapper] Test setup, not cleaning
[2025-06-04 10:11:33] 2025-06-04 14:11:33,803 [wrapper] apfmon messages muted
[2025-06-04 10:11:33] 2025-06-04 14:11:33,806 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:11:33] 2025-06-04 14:11:33,809 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:11:33]  *** Error codes and diagnostics ***
[2025-06-04 10:11:33]     "exeErrorCode": 0,
[2025-06-04 10:11:33]     "exeErrorDiag": "",
[2025-06-04 10:11:33]     "pilotErrorCode": 0,
[2025-06-04 10:11:33]     "pilotErrorDiag": "",
[2025-06-04 10:11:33]  *** Listing of results directory ***
[2025-06-04 10:11:33] total 388716
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:11:33] -rwx------. 1 boincer umatlas     37140 Jun  4 04:48 runpilot2-wrapper.sh
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:48 queuedata.json
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:11:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:04 run_atlas
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:04 job.xml
[2025-06-04 10:11:33] -rw-r--r--. 2 boincer umatlas 216569956 Jun  4 09:04 EVNT.45006593._001372.pool.root.1
[2025-06-04 10:11:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:04 start_atlas.sh
[2025-06-04 10:11:33] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:04 shared
[2025-06-04 10:11:33] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 09:04 input.tar.gz
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:04 boinc_lockfile
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 09:04 pandaJob.out
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas    986811 Jun  4 09:04 agis_schedconf.cvmfs.json
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:11:33] drwx------. 4 boincer umatlas      4096 Jun  4 09:04 pilot3
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:10 boinc_task_state.xml
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas 176250839 Jun  4 10:10 HITS.45006595._055840.pool.root.1
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas      6931 Jun  4 10:10 init_data.xml
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas      1030 Jun  4 10:11 memory_monitor_summary.json
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas    301378 Jun  4 10:11 log.45006595._055840.job.log.tgz.1
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas      7688 Jun  4 10:11 heartbeat.json
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas        95 Jun  4 10:11 pilot_heartbeat.json
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:11 boinc_mmap_file
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:11 wrapper_checkpoint.txt
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas      4425 Jun  4 10:11 pilotlog.txt
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas    395040 Jun  4 10:11 log.45006595._055840.job.log.1
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas       357 Jun  4 10:11 output.list
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:11 runtime_log
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas    716800 Jun  4 10:11 result.tar.gz
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 10:11 runtime_log.err
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas       651 Jun  4 10:11 oXJKDmVyyg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtyaKDma5Qsqm.diag
[2025-06-04 10:11:33] -rw-r--r--. 1 boincer umatlas     21361 Jun  4 10:11 stderr.txt
[2025-06-04 10:11:33] HITS file was successfully produced:
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas 176250839 Jun  4 10:10 shared/HITS.pool.root.1
[2025-06-04 10:11:33]  *** Contents of shared directory: ***
[2025-06-04 10:11:33] total 384840
[2025-06-04 10:11:33] -rw-r--r--. 2 boincer umatlas 216569956 Jun  4 09:04 ATLAS.root_0
[2025-06-04 10:11:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:04 start_atlas.sh
[2025-06-04 10:11:33] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 09:04 input.tar.gz
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas 176250839 Jun  4 10:10 HITS.pool.root.1
[2025-06-04 10:11:33] -rw-------. 1 boincer umatlas    716800 Jun  4 10:11 result.tar.gz
10:11:35 (1719132): run_atlas exited; CPU time 26365.392460
10:11:35 (1719132): called boinc_finish(0)

</stderr_txt>
]]>

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